iMaps Archive

iMaps was an online tool for analysing CLIP data, developed by Genialis in collaboration with the Ule Lab. It was online from 2017 to 2022, after which it was superceded by Flow, a general purpose analysis platform for bioinformatics data created by Goodwright. This archive contains the collections that were publicly available in iMaps.

Folder icon liquid droplet detergent iCLIP

Julian Zagalak
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13 April, 2018
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2 samples
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81 files

In this series of iCLIPs we treat cell with 1,6-hexanediol (1,6-HD) and other liquid droplet detergents in order to dissociate non-membranous subcellular compartments (eg. speckles, paraspeckles and stress granules). We are testing if the detergents capability of dissolving LCR-interactions could be used to minimise co-purification of contaminant RBPs during the pull-down step. Typical treatments are 5min 6% 1,6-HD PBS in live cells.

Folder icon 3T3 miCLIP PUS1

Charlotte Capitanchik
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23 November, 2017
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22 samples
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566 files

Folder icon Genomes and Annotations

Janez Kokosar
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26 April, 2017
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0 samples
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1108 files

A meta collection that holds common Genome and Annotation files