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Coordinated post-transcriptional control of oncogene-induced senescence by UNR/CSDE1
Rosario Avolio
April 3, 2020
Oncogene-induced senescence (OIS) is a form of stable cell-cycle arrest arising in response to oncogenic stimulation. OIS must be bypassed for transformation, but the mechanisms of OIS establishment and bypass remain poorly understood, especially at the post-transcriptional level. Here, we show that the RNA-binding protein UNR/CSDE1 enables OIS in primary mouse keratinocytes. Depletion of CSDE1 leads to senescence bypass, cell immortalization, and tumor formation, indicating that CSDE1 behaves as a tumor suppressor. Unbiased high-throughput analyses uncovered that CSDE1 promotes OIS by two independent molecular mechanisms: enhancement of the stability of senescence-associated secretory phenotype (SASP) factor mRNAs and repression of Ybx1 mRNA translation. Importantly, depletion of YBX1 from immortal keratinocytes rescues senescence and uncouples proliferation arrest from the SASP, revealing multilayered mechanisms exerted by CSDE1 to coordinate senescence. Our data highlight the relevance of post-transcriptional control in the regulation of senescence.
NI_3
FASTQ file (single-end)
ni-3_fastqc.zip
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iCLIP reads proxy
ni-3_mapped_to_genome.fastq.gz
511.81 MB
iCount RNA-maps
ni-3_mapped_to_genome_single.tar.gz
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Paraclu
ni-3_mapped_to_genome_single_peaks.bed.gz
223.86 kB
PEKA
ni-3_mapped_to_genome
Directory
ni-3_mapped_to_genome.tar.gz
487.42 kB
Cutadapt (single-end)
ni-3_trimmed.fastq.gz
667.55 MB
STAR
ni-3_trimmed.bam
855.14 MB
ni-3_trimmed.bam.bai
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ni-3_trimmed_unmapped.out.mate1.fastq.gz
511.81 MB
ni-3_trimmed_SJ.out.tab
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ni-3_trimmed_stats.txt
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iCount xlsites
ni-3_premapped_to_ncRNAs_reads_single.bed.gz
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ni-3_premapped_to_ncRNAs_skipped.bam
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ni-3_premapped_to_ncRNAs_single.bed.gz
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ni-3_premapped_to_ncRNAs_single.bedgraph
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ni-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
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ni-3_mapped_to_genome.bam.bai
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ni-3_mapped_to_genome.bam
642.51 MB
ni-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
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ni-3_mapped_to_genome_stats.txt
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ni-3_mapped_to_genome_SJ.out.tab
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iCount xlsites
ni-3_mapped_to_genome_singleAndMulti.bed.gz
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ni-3_mapped_to_genome_skipped.bam
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ni-3_mapped_to_genome_reads_single.bed.gz
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ni-3_mapped_to_genome_single.bedgraph
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ni-3_mapped_to_genome_single.bed.gz
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iCount summary
ni-3_mapped_to_genome_single_summary_gene.tsv
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ni-3_mapped_to_genome_single_summary_type.tsv
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ni-3_mapped_to_genome_single_summary_subtype.tsv
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iCount peaks
ni-3_mapped_to_genome_single_peaks.bed.gz
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ni-3_mapped_to_genome_single_peaks.bedgraph
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ni-3_mapped_to_genome_single_scores.tsv.gz
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EV_1
FASTQ file (single-end)
ev-1_fastqc.zip
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iCount summary
ev-1_mapped_to_genome_single_summary_type.tsv
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ev-1_mapped_to_genome_single_summary_subtype.tsv
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ev-1_mapped_to_genome_single_summary_gene.tsv
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iCount RNA-maps
ev-1_mapped_to_genome_single.tar.gz
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PEKA
ev-1_mapped_to_genome
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ev-1_mapped_to_genome.tar.gz
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ev-1_trimmed.fastq.gz
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ev-1_trimmed.bam
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ev-1_trimmed_stats.txt
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ev-1_trimmed_unmapped.out.mate1.fastq.gz
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ev-1_trimmed.bam.bai
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ev-1_trimmed_SJ.out.tab
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ev-1_premapped_to_ncRNAs_skipped.bam
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ev-1_premapped_to_ncRNAs_reads_single.bed.gz
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ev-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
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ev-1_premapped_to_ncRNAs_single.bedgraph
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ev-1_premapped_to_ncRNAs_single.bed.gz
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iCLIP reads proxy
ev-1_mapped_to_genome.fastq.gz
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ev-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
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ev-1_mapped_to_genome.bam.bai
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ev-1_mapped_to_genome.bam
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ev-1_mapped_to_genome_stats.txt
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ev-1_mapped_to_genome_SJ.out.tab
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ev-1_mapped_to_genome_singleAndMulti.bed.gz
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ev-1_mapped_to_genome_single.bed.gz
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ev-1_mapped_to_genome_skipped.bam
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ev-1_mapped_to_genome_single.bedgraph
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ev-1_mapped_to_genome_reads_single.bed.gz
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ev-1_mapped_to_genome_single_peaks.bed.gz
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iCount peaks
ev-1_mapped_to_genome_single_scores.tsv.gz
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ev-1_mapped_to_genome_single_peaks.bedgraph
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ev-1_mapped_to_genome_single_peaks.bed.gz
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ev-2-nouv_mapped_to_genome_stats.txt
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ev-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
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ev-2-nouv_mapped_to_genome.bam.bai
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ev-2-nouv_mapped_to_genome.bam
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ev-2-nouv_mapped_to_genome_SJ.out.tab
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ev-2-nouv_mapped_to_genome.bw
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ev-2-nouv.fastq.gz
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ev-2-nouv_fastqc.zip
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Cutadapt (single-end)
ev-2-nouv_trimmed.fastq.gz
19.94 MB
iCount xlsites
ev-2-nouv_premapped_to_ncRNAs_single.bed.gz
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ev-2-nouv_premapped_to_ncRNAs_skipped.bam
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ev-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
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ev-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
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ev-2-nouv_premapped_to_ncRNAs_single.bedgraph
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iCLIP reads proxy
ev-2-nouv_mapped_to_genome.fastq.gz
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iCount summary
ev-2-nouv_mapped_to_genome_single_summary_type.tsv
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ev-2-nouv_mapped_to_genome_single_summary_gene.tsv
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ev-2-nouv_mapped_to_genome_single_summary_subtype.tsv
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ev-2-nouv_mapped_to_genome_single.tar.gz
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ev-2-nouv_trimmed.bam.bai
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ev-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
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ev-2-nouv_trimmed_SJ.out.tab
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ev-2-nouv_trimmed.bw
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ev-2-nouv_trimmed.bam
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ev-2-nouv_trimmed_stats.txt
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iCount xlsites
ev-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
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ev-2-nouv_mapped_to_genome_reads_single.bed.gz
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ev-2-nouv_mapped_to_genome_single.bed.gz
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ev-2-nouv_mapped_to_genome_single.bedgraph
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ev-2-nouv_mapped_to_genome_skipped.bam
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Paraclu
ev-2-nouv_mapped_to_genome_single_peaks.bed.gz
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PEKA
ev-2-nouv_mapped_to_genome.tar.gz
193.84 kB
ev-2-nouv_mapped_to_genome
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iCount peaks
ev-2-nouv_mapped_to_genome_single_peaks.bedgraph
14.49 kB
ev-2-nouv_mapped_to_genome_single_scores.tsv.gz
163.08 kB
ev-2-nouv_mapped_to_genome_single_peaks.bed.gz
14.46 kB
No Sample
PEKA
ras-1_mapped_to_genome
Directory
ras-1_mapped_to_genome.tar.gz
580.50 kB
Upload iCount sample annotation
CSDE1_in_PMK_NI_annotation.xlsx
221.58 kB
CSDE1_in_PMK_NI_annotation.tab.gz
529 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
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FASTQ file (single-end)
demux_nomatch.fastq.gz
2.83 GB
demux_nomatch_fastqc.zip
461.37 kB
FASTQ file (single-end)
ni-3-nouv.fastq.gz
9.05 MB
ni-3-nouv_fastqc.zip
502.91 kB
FASTQ file (single-end)
ni-1_fastqc.zip
387.96 kB
FASTQ file (single-end)
ni-2_fastqc.zip
397.04 kB
FASTQ file (single-end)
ni-1-nouv.fastq.gz
2.53 MB
ni-1-nouv_fastqc.zip
542.32 kB
FASTQ file (single-end)
ni-2-nouv.fastq.gz
57.89 MB
ni-2-nouv_fastqc.zip
528.57 kB
iCount RNA-maps
ni-3-nouv_mapped_to_genome_single.tar.gz
334.21 kB
PEKA
ni-3-nouv_mapped_to_genome.tar.gz
134 B
iCount RNA-maps
ni-2-nouv_mapped_to_genome_single.tar.gz
547.15 kB
Paraclu
ni-2-nouv_mapped_to_genome_single_peaks.bed.gz
1.68 kB
Cutadapt (single-end)
ni-1-nouv_trimmed.fastq.gz
2.33 MB
iCLIP reads proxy
ni-1-nouv_mapped_to_genome.fastq.gz
1.57 MB
Paraclu
ni-1-nouv_mapped_to_genome_single_peaks.bed.gz
92 B
iCount RNA-maps
ni-1-nouv_mapped_to_genome_single.tar.gz
339.31 kB
PEKA
ni-1-nouv_mapped_to_genome.tar.gz
135 B
FASTQ file (single-end)
ni-3_fastqc.zip
397.00 kB
iCLIP reads proxy
ni-3_mapped_to_genome.fastq.gz
511.81 MB
iCount RNA-maps
ni-3_mapped_to_genome_single.tar.gz
2.29 MB
Paraclu
ni-3_mapped_to_genome_single_peaks.bed.gz
223.86 kB
PEKA
ni-3_mapped_to_genome
Directory
ni-3_mapped_to_genome.tar.gz
487.42 kB
Cutadapt (single-end)
ni-3_trimmed.fastq.gz
667.55 MB
iCLIP reads proxy
ni-2_mapped_to_genome.fastq.gz
1.01 GB
iCount xlsites
ni-2_mapped_to_genome_single.bed.gz
19.56 MB
ni-2_mapped_to_genome_skipped.bam
13.35 kB
ni-2_mapped_to_genome_single.bedgraph
93.80 MB
ni-2_mapped_to_genome_singleAndMulti.bed.gz
34.54 MB
ni-2_mapped_to_genome_reads_single.bed.gz
22.16 MB
iCount RNA-maps
ni-2_mapped_to_genome_single.tar.gz
3.61 MB
Cutadapt (single-end)
ni-2_trimmed.fastq.gz
1.33 GB
iCLIP reads proxy
ni-1_mapped_to_genome.fastq.gz
750.42 MB
iCount RNA-maps
ni-1_mapped_to_genome_single.tar.gz
3.13 MB
Paraclu
ni-1_mapped_to_genome_single_peaks.bed.gz
430.78 kB
Cutadapt (single-end)
ni-3-nouv_trimmed.fastq.gz
7.11 MB
Cutadapt (single-end)
ni-2-nouv_trimmed.fastq.gz
51.94 MB
STAR
ni-3-nouv_trimmed.bam.bai
19.38 kB
ni-3-nouv_trimmed_SJ.out.tab
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ni-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
6.33 MB
ni-3-nouv_trimmed_stats.txt
1.78 kB
ni-3-nouv_trimmed.bw
274.98 kB
ni-3-nouv_trimmed.bam
9.27 MB
iCLIP reads proxy
ni-3-nouv_mapped_to_genome.fastq.gz
6.33 MB
STAR
ni-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
39.35 MB
ni-2-nouv_trimmed.bam.bai
22.60 kB
ni-2-nouv_trimmed.bam
71.49 MB
ni-2-nouv_trimmed_stats.txt
1.78 kB
ni-2-nouv_trimmed.bw
276.96 kB
ni-2-nouv_trimmed_SJ.out.tab
0 B
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ni-1-nouv_trimmed_stats.txt
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ni-1-nouv_trimmed.bam.bai
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ni-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
1.57 MB
ni-1-nouv_trimmed.bam
3.24 MB
ni-1-nouv_trimmed.bw
274.79 kB
ni-1-nouv_trimmed_SJ.out.tab
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Cutadapt (single-end)
ni-1_trimmed.fastq.gz
883.37 MB
STAR
ni-3_trimmed.bam
855.14 MB
ni-3_trimmed.bam.bai
22.62 kB
ni-3_trimmed_unmapped.out.mate1.fastq.gz
511.81 MB
ni-3_trimmed_SJ.out.tab
0 B
ni-3_trimmed_stats.txt
1.79 kB
iCount xlsites
ni-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
12.23 kB
ni-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
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ni-3-nouv_premapped_to_ncRNAs_single.bed.gz
10.78 kB
ni-3-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
iCount xlsites
ni-2-nouv_premapped_to_ncRNAs_single.bed.gz
48.20 kB
ni-2-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
100.51 kB
ni-2-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ni-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
52.50 kB
iCLIP reads proxy
ni-2-nouv_mapped_to_genome.fastq.gz
39.35 MB
iCount xlsites
ni-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
28.81 kB
ni-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
13.23 kB
ni-1-nouv_premapped_to_ncRNAs_single.bed.gz
12.11 kB
ni-1-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
STAR
ni-2_trimmed_unmapped.out.mate1.fastq.gz
1.01 GB
ni-2_trimmed.bam.bai
22.63 kB
ni-2_trimmed_stats.txt
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ni-2_trimmed_SJ.out.tab
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STAR
ni-1_trimmed_unmapped.out.mate1.fastq.gz
750.42 MB
ni-1_trimmed_stats.txt
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ni-1_trimmed_SJ.out.tab
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ni-1_trimmed.bam.bai
22.65 kB
STAR
ni-3-nouv_mapped_to_genome.bam
10.91 MB
ni-3-nouv_mapped_to_genome.bam.bai
1.79 MB
ni-3-nouv_mapped_to_genome_stats.txt
1.79 kB
ni-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
4.53 MB
ni-3-nouv_mapped_to_genome.bw
4.74 kB
ni-3-nouv_mapped_to_genome_SJ.out.tab
8.82 kB
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ni-2-nouv_mapped_to_genome.bam.bai
2.36 MB
ni-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
29.83 MB
ni-2-nouv_mapped_to_genome_stats.txt
1.80 kB
ni-2-nouv_mapped_to_genome.bw
5.48 kB
ni-2-nouv_mapped_to_genome.bam
52.98 MB
ni-2-nouv_mapped_to_genome_SJ.out.tab
94.23 kB
STAR
ni-1-nouv_mapped_to_genome.bam.bai
1.45 MB
ni-1-nouv_mapped_to_genome.bam
2.35 MB
ni-1-nouv_mapped_to_genome_SJ.out.tab
5.64 kB
ni-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.10 MB
ni-1-nouv_mapped_to_genome_stats.txt
1.79 kB
ni-1-nouv_mapped_to_genome.bw
4.44 kB
iCount xlsites
ni-3_premapped_to_ncRNAs_reads_single.bed.gz
123.19 kB
ni-3_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-3_premapped_to_ncRNAs_single.bed.gz
111.55 kB
ni-3_premapped_to_ncRNAs_single.bedgraph
156 B
ni-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
280.56 kB
iCount xlsites
ni-1_premapped_to_ncRNAs_reads_single.bed.gz
200.18 kB
ni-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
471.83 kB
ni-1_premapped_to_ncRNAs_single.bed.gz
186.65 kB
ni-1_premapped_to_ncRNAs_skipped.bam
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ni-1_premapped_to_ncRNAs_single.bedgraph
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iCount xlsites
ni-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
392.46 kB
ni-2_premapped_to_ncRNAs_single.bed.gz
157.14 kB
ni-2_premapped_to_ncRNAs_reads_single.bed.gz
169.14 kB
ni-2_premapped_to_ncRNAs_single.bedgraph
156 B
ni-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
iCount xlsites
ni-3-nouv_mapped_to_genome_skipped.bam
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ni-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
251.70 kB
ni-3-nouv_mapped_to_genome_single.bedgraph
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ni-3-nouv_mapped_to_genome_single.bed.gz
36.42 kB
ni-3-nouv_mapped_to_genome_reads_single.bed.gz
40.11 kB
iCount xlsites
ni-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
722.00 kB
ni-2-nouv_mapped_to_genome_single.bed.gz
254.80 kB
ni-2-nouv_mapped_to_genome_skipped.bam
1.85 kB
ni-2-nouv_mapped_to_genome_reads_single.bed.gz
291.18 kB
ni-2-nouv_mapped_to_genome_single.bedgraph
1008.52 kB
iCount xlsites
ni-1-nouv_mapped_to_genome_single.bed.gz
19.09 kB
ni-1-nouv_mapped_to_genome_single.bedgraph
64.63 kB
ni-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
76.63 kB
ni-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ni-1-nouv_mapped_to_genome_reads_single.bed.gz
21.27 kB
STAR
ni-3_mapped_to_genome.bam.bai
3.06 MB
ni-3_mapped_to_genome.bam
642.51 MB
ni-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
93.68 MB
ni-3_mapped_to_genome_stats.txt
1.82 kB
ni-3_mapped_to_genome_SJ.out.tab
2.31 MB
STAR
ni-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
135.55 MB
ni-1_mapped_to_genome.bam.bai
2.73 MB
ni-1_mapped_to_genome.bam
992.93 MB
ni-1_mapped_to_genome_SJ.out.tab
3.50 MB
ni-1_mapped_to_genome_stats.txt
1.82 kB
iCount summary
ni-3-nouv_mapped_to_genome_single_summary_subtype.tsv
924 B
ni-3-nouv_mapped_to_genome_single_summary_type.tsv
441 B
ni-3-nouv_mapped_to_genome_single_summary_gene.tsv
123.22 kB
Paraclu
ni-3-nouv_mapped_to_genome_single_peaks.bed.gz
229 B
iCount summary
ni-2-nouv_mapped_to_genome_single_summary_subtype.tsv
1016 B
ni-2-nouv_mapped_to_genome_single_summary_type.tsv
459 B
ni-2-nouv_mapped_to_genome_single_summary_gene.tsv
658.42 kB
STAR
ni-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
192.02 MB
ni-2_mapped_to_genome.bam.bai
2.65 MB
ni-2_mapped_to_genome_stats.txt
1.82 kB
ni-2_mapped_to_genome.bam
1.33 GB
ni-2_mapped_to_genome_SJ.out.tab
4.15 MB
iCount summary
ni-1-nouv_mapped_to_genome_single_summary_gene.tsv
117.13 kB
ni-1-nouv_mapped_to_genome_single_summary_type.tsv
438 B
ni-1-nouv_mapped_to_genome_single_summary_subtype.tsv
910 B
iCount xlsites
ni-1_mapped_to_genome_skipped.bam
9.30 kB
ni-1_mapped_to_genome_single.bed.gz
18.58 MB
ni-1_mapped_to_genome_reads_single.bed.gz
21.12 MB
ni-1_mapped_to_genome_singleAndMulti.bed.gz
35.00 MB
ni-1_mapped_to_genome_single.bedgraph
88.35 MB
iCount xlsites
ni-3_mapped_to_genome_singleAndMulti.bed.gz
14.44 MB
ni-3_mapped_to_genome_skipped.bam
5.72 kB
ni-3_mapped_to_genome_reads_single.bed.gz
8.55 MB
ni-3_mapped_to_genome_single.bedgraph
34.46 MB
ni-3_mapped_to_genome_single.bed.gz
7.31 MB
PEKA
ni-2-nouv_mapped_to_genome
Directory
ni-2-nouv_mapped_to_genome.tar.gz
270.32 kB
iCount summary
ni-3_mapped_to_genome_single_summary_gene.tsv
1.85 MB
ni-3_mapped_to_genome_single_summary_type.tsv
470 B
ni-3_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount summary
ni-1_mapped_to_genome_single_summary_type.tsv
481 B
ni-1_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ni-1_mapped_to_genome_single_summary_gene.tsv
2.21 MB
iCount summary
ni-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ni-2_mapped_to_genome_single_summary_type.tsv
480 B
ni-2_mapped_to_genome_single_summary_gene.tsv
2.35 MB
Paraclu
ni-2_mapped_to_genome_single_peaks.bed.gz
666.97 kB
PEKA
ni-1_mapped_to_genome
Directory
ni-1_mapped_to_genome.tar.gz
547.67 kB
PEKA
ni-2_mapped_to_genome
Directory
ni-2_mapped_to_genome.tar.gz
558.37 kB
Upload iCount sample annotation
CSDE1_in_PMK_EV_Ras_annotation.tab.gz
603 B
CSDE1_in_PMK_EV_Ras_annotation.xlsx
222.11 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
549 B
FASTQ file (single-end)
ras-3-nouv.fastq.gz
38.74 MB
ras-3-nouv_fastqc.zip
506.10 kB
FASTQ file (single-end)
demux_nomatch.fastq.gz
496.32 MB
demux_nomatch_fastqc.zip
414.52 kB
FASTQ file (single-end)
ev-1_fastqc.zip
423.44 kB
FASTQ file (single-end)
ev-2_fastqc.zip
424.02 kB
FASTQ file (single-end)
ev-2-nouv.fastq.gz
21.36 MB
ev-2-nouv_fastqc.zip
531.93 kB
FASTQ file (single-end)
ev-1-nouv.fastq.gz
65.80 MB
ev-1-nouv_fastqc.zip
496.86 kB
FASTQ file (single-end)
ras-1_fastqc.zip
394.64 kB
FASTQ file (single-end)
ev-3-nouv.fastq.gz
5.51 MB
ev-3-nouv_fastqc.zip
490.36 kB
FASTQ file (single-end)
ras-2-nouv.fastq.gz
85.84 MB
ras-2-nouv_fastqc.zip
495.87 kB
FASTQ file (single-end)
ev-3_fastqc.zip
407.83 kB
FASTQ file (single-end)
ras-1-nouv.fastq.gz
16.86 MB
ras-1-nouv_fastqc.zip
542.19 kB
FASTQ file (single-end)
ras-2_fastqc.zip
392.65 kB
Cutadapt (single-end)
ras-3-nouv_trimmed.fastq.gz
36.51 MB
iCLIP reads proxy
ras-3-nouv_mapped_to_genome.fastq.gz
22.29 MB
Paraclu
ras-3-nouv_mapped_to_genome_single_peaks.bed.gz
1.43 kB
Cutadapt (single-end)
ras-2-nouv_trimmed.fastq.gz
80.07 MB
iCLIP reads proxy
ras-2-nouv_mapped_to_genome.fastq.gz
41.13 MB
iCount RNA-maps
ras-2-nouv_mapped_to_genome_single.tar.gz
592.29 kB
Paraclu
ras-2-nouv_mapped_to_genome_single_peaks.bed.gz
2.44 kB
PEKA
ras-2-nouv_mapped_to_genome
Directory
ras-2-nouv_mapped_to_genome.tar.gz
297.92 kB
iCLIP reads proxy
ras-1-nouv_mapped_to_genome.fastq.gz
9.69 MB
Paraclu
ras-1-nouv_mapped_to_genome_single_peaks.bed.gz
594 B
FASTQ file (single-end)
ras-3_fastqc.zip
390.88 kB
iCLIP reads proxy
ras-3_mapped_to_genome.fastq.gz
1.23 GB
Paraclu
ras-3_mapped_to_genome_single_peaks.bed.gz
756.70 kB
iCount RNA-maps
ras-3_mapped_to_genome_single.tar.gz
4.00 MB
PEKA
ras-3_mapped_to_genome
Directory
ras-3_mapped_to_genome.tar.gz
583.40 kB
iCLIP reads proxy
ras-2_mapped_to_genome.fastq.gz
1.63 GB
iCount summary
ras-2_mapped_to_genome_single_summary_type.tsv
490 B
ras-2_mapped_to_genome_single_summary_gene.tsv
2.76 MB
ras-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
Paraclu
ras-2_mapped_to_genome_single_peaks.bed.gz
1.01 MB
Cutadapt (single-end)
ras-2_trimmed.fastq.gz
1.96 GB
Paraclu
ras-1_mapped_to_genome_single_peaks.bed.gz
654.45 kB
iCount RNA-maps
ras-1_mapped_to_genome_single.tar.gz
3.73 MB
Cutadapt (single-end)
ev-3-nouv_trimmed.fastq.gz
5.32 MB
iCLIP reads proxy
ev-3-nouv_mapped_to_genome.fastq.gz
3.17 MB
iCount RNA-maps
ev-3-nouv_mapped_to_genome_single.tar.gz
412.88 kB
PEKA
ev-3-nouv_mapped_to_genome.tar.gz
62.36 kB
ev-3-nouv_mapped_to_genome
Directory
Cutadapt (single-end)
ev-2-nouv_trimmed.fastq.gz
19.94 MB
iCount xlsites
ev-2-nouv_premapped_to_ncRNAs_single.bed.gz
22.19 kB
ev-2-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
60.85 kB
ev-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
25.19 kB
ev-2-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
iCLIP reads proxy
ev-2-nouv_mapped_to_genome.fastq.gz
11.28 MB
iCount summary
ev-2-nouv_mapped_to_genome_single_summary_type.tsv
454 B
ev-2-nouv_mapped_to_genome_single_summary_gene.tsv
284.07 kB
ev-2-nouv_mapped_to_genome_single_summary_subtype.tsv
936 B
iCount RNA-maps
ev-2-nouv_mapped_to_genome_single.tar.gz
401.99 kB
Cutadapt (single-end)
ev-1-nouv_trimmed.fastq.gz
63.16 MB
iCLIP reads proxy
ev-1-nouv_mapped_to_genome.fastq.gz
26.50 MB
Paraclu
ev-1-nouv_mapped_to_genome_single_peaks.bed.gz
314 B
iCount RNA-maps
ev-1-nouv_mapped_to_genome_single.tar.gz
463.87 kB
iCount summary
ev-3_mapped_to_genome_single_summary_type.tsv
485 B
ev-3_mapped_to_genome_single_summary_gene.tsv
2.29 MB
ev-3_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
Paraclu
ev-3_mapped_to_genome_single_peaks.bed.gz
480.04 kB
iCount RNA-maps
ev-3_mapped_to_genome_single.tar.gz
3.12 MB
iCount summary
ev-2_mapped_to_genome_single_summary_type.tsv
480 B
ev-2_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ev-2_mapped_to_genome_single_summary_gene.tsv
1.55 MB
iCount RNA-maps
ev-2_mapped_to_genome_single.tar.gz
1.25 MB
PEKA
ev-2_mapped_to_genome
Directory
ev-2_mapped_to_genome.tar.gz
450.20 kB
Cutadapt (single-end)
ev-2_trimmed.fastq.gz
633.14 MB
iCount summary
ev-1_mapped_to_genome_single_summary_type.tsv
475 B
ev-1_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ev-1_mapped_to_genome_single_summary_gene.tsv
1.35 MB
iCount RNA-maps
ev-1_mapped_to_genome_single.tar.gz
1.10 MB
PEKA
ev-1_mapped_to_genome
Directory
ev-1_mapped_to_genome.tar.gz
434.58 kB
Cutadapt (single-end)
ras-1-nouv_trimmed.fastq.gz
16.28 MB
Cutadapt (single-end)
ev-1_trimmed.fastq.gz
364.00 MB
Cutadapt (single-end)
ras-3_trimmed.fastq.gz
1.51 GB
Cutadapt (single-end)
ras-1_trimmed.fastq.gz
1.13 GB
Cutadapt (single-end)
ev-3_trimmed.fastq.gz
888.71 MB
STAR
ras-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
22.29 MB
ras-3-nouv_trimmed.bam
56.47 MB
ras-3-nouv_trimmed_stats.txt
1.79 kB
ras-3-nouv_trimmed.bam.bai
22.62 kB
ras-3-nouv_trimmed_SJ.out.tab
0 B
ras-3-nouv_trimmed.bw
277.05 kB
STAR
ras-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
9.69 MB
ras-1-nouv_trimmed.bam
26.44 MB
ras-1-nouv_trimmed.bam.bai
21.98 kB
ras-1-nouv_trimmed.bw
276.29 kB
ras-1-nouv_trimmed_SJ.out.tab
0 B
ras-1-nouv_trimmed_stats.txt
1.78 kB
STAR
ras-2-nouv_trimmed_stats.txt
1.79 kB
ras-2-nouv_trimmed.bam.bai
22.60 kB
ras-2-nouv_trimmed.bam
153.89 MB
ras-2-nouv_trimmed_SJ.out.tab
0 B
ras-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
41.13 MB
STAR
ras-3_trimmed_unmapped.out.mate1.fastq.gz
1.23 GB
ras-3_trimmed.bam.bai
22.68 kB
ras-3_trimmed_SJ.out.tab
0 B
ras-3_trimmed.bam
2.10 GB
ras-3_trimmed_stats.txt
1.79 kB
STAR
ev-3-nouv_trimmed.bam
6.85 MB
ev-3-nouv_trimmed_SJ.out.tab
0 B
ev-3-nouv_trimmed.bam.bai
19.77 kB
ev-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
3.17 MB
ev-3-nouv_trimmed_stats.txt
1.78 kB
ev-3-nouv_trimmed.bw
275.03 kB
STAR
ev-2-nouv_trimmed.bam.bai
21.70 kB
ev-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
11.28 MB
ev-2-nouv_trimmed_SJ.out.tab
0 B
ev-2-nouv_trimmed.bw
275.88 kB
ev-2-nouv_trimmed.bam
33.05 MB
ev-2-nouv_trimmed_stats.txt
1.78 kB
STAR
ev-1-nouv_trimmed.bam
122.47 MB
ev-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
26.50 MB
ev-1-nouv_trimmed_SJ.out.tab
0 B
ev-1-nouv_trimmed_stats.txt
1.79 kB
ev-1-nouv_trimmed.bam.bai
22.05 kB
STAR
ras-2_trimmed_unmapped.out.mate1.fastq.gz
1.63 GB
ras-2_trimmed.bam
2.63 GB
ras-2_trimmed.bam.bai
22.70 kB
ras-2_trimmed_stats.txt
1.79 kB
ras-2_trimmed_SJ.out.tab
0 B
STAR
ras-1_trimmed_unmapped.out.mate1.fastq.gz
959.68 MB
ras-1_trimmed.bam
1.56 GB
ras-1_trimmed.bam.bai
22.66 kB
ras-1_trimmed_stats.txt
1.79 kB
ras-1_trimmed_SJ.out.tab
0 B
STAR
ev-3_trimmed_unmapped.out.mate1.fastq.gz
726.17 MB
ev-3_trimmed.bam.bai
22.66 kB
ev-3_trimmed_stats.txt
1.79 kB
ev-3_trimmed_SJ.out.tab
0 B
STAR
ev-1_trimmed.bam
479.93 MB
ev-1_trimmed_stats.txt
1.79 kB
ev-1_trimmed_unmapped.out.mate1.fastq.gz
303.20 MB
ev-1_trimmed.bam.bai
22.63 kB
ev-1_trimmed_SJ.out.tab
0 B
STAR
ev-2_trimmed.bam.bai
22.76 kB
ev-2_trimmed.bam
876.04 MB
ev-2_trimmed_SJ.out.tab
0 B
ev-2_trimmed_stats.txt
1.79 kB
ev-2_trimmed_unmapped.out.mate1.fastq.gz
499.12 MB
iCount xlsites
ras-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
65.56 kB
ras-3-nouv_premapped_to_ncRNAs_single.bed.gz
61.39 kB
ras-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
153.06 kB
ras-3-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
ras-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
iCount xlsites
ras-1-nouv_premapped_to_ncRNAs_single.bed.gz
42.37 kB
ras-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
98.71 kB
ras-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
45.24 kB
ras-1-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
iCount xlsites
ras-2-nouv_premapped_to_ncRNAs_single.bed.gz
77.24 kB
ras-2-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
ras-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
197.56 kB
ras-2-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
82.28 kB
iCount xlsites
ev-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
48.25 kB
ev-3-nouv_premapped_to_ncRNAs_single.bed.gz
26.81 kB
ev-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
28.79 kB
ev-3-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ev-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
iCount xlsites
ev-1-nouv_premapped_to_ncRNAs_single.bed.gz
39.78 kB
ev-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
45.40 kB
ev-1-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ev-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
107.40 kB
iCount xlsites
ras-3_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-3_premapped_to_ncRNAs_reads_single.bed.gz
276.60 kB
ras-3_premapped_to_ncRNAs_single.bed.gz
261.38 kB
ras-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
707.14 kB
ras-3_premapped_to_ncRNAs_single.bedgraph
158 B
iCount xlsites
ras-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
727.03 kB
ras-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-2_premapped_to_ncRNAs_single.bed.gz
272.92 kB
ras-2_premapped_to_ncRNAs_single.bedgraph
158 B
ras-2_premapped_to_ncRNAs_reads_single.bed.gz
288.74 kB
iCount xlsites
ras-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
664.88 kB
ras-1_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-1_premapped_to_ncRNAs_single.bedgraph
158 B
ras-1_premapped_to_ncRNAs_reads_single.bed.gz
256.48 kB
ras-1_premapped_to_ncRNAs_single.bed.gz
241.30 kB
iCLIP reads proxy
ras-1_mapped_to_genome.fastq.gz
959.68 MB
iCount xlsites
ev-3_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
676.50 kB
ev-3_premapped_to_ncRNAs_reads_single.bed.gz
251.83 kB
ev-3_premapped_to_ncRNAs_single.bed.gz
235.64 kB
ev-3_premapped_to_ncRNAs_single.bedgraph
156 B
iCLIP reads proxy
ev-3_mapped_to_genome.fastq.gz
726.17 MB
iCount xlsites
ev-1_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-1_premapped_to_ncRNAs_reads_single.bed.gz
122.09 kB
ev-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
345.00 kB
ev-1_premapped_to_ncRNAs_single.bedgraph
156 B
ev-1_premapped_to_ncRNAs_single.bed.gz
107.17 kB
iCLIP reads proxy
ev-1_mapped_to_genome.fastq.gz
303.20 MB
STAR
ras-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.42 MB
ras-3-nouv_mapped_to_genome.bam.bai
2.53 MB
ras-3-nouv_mapped_to_genome.bam
33.59 MB
ras-3-nouv_mapped_to_genome_SJ.out.tab
79.19 kB
ras-3-nouv_mapped_to_genome_stats.txt
1.80 kB
ras-3-nouv_mapped_to_genome.bw
6.03 kB
iCount xlsites
ev-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-2_premapped_to_ncRNAs_reads_single.bed.gz
170.33 kB
ev-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
469.10 kB
ev-2_premapped_to_ncRNAs_single.bed.gz
149.26 kB
ev-2_premapped_to_ncRNAs_single.bedgraph
156 B
iCLIP reads proxy
ev-2_mapped_to_genome.fastq.gz
499.12 MB
STAR
ras-1-nouv_mapped_to_genome.bam.bai
2.05 MB
ras-1-nouv_mapped_to_genome.bam
14.70 MB
ras-1-nouv_mapped_to_genome_stats.txt
1.80 kB
ras-1-nouv_mapped_to_genome_SJ.out.tab
33.61 kB
ras-1-nouv_mapped_to_genome.bw
5.34 kB
ras-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
6.82 MB
STAR
ras-2-nouv_mapped_to_genome.bam
58.89 MB
ras-2-nouv_mapped_to_genome_stats.txt
1.81 kB
ras-2-nouv_mapped_to_genome.bam.bai
2.91 MB
ras-2-nouv_mapped_to_genome.bw
6.46 kB
ras-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
29.47 MB
ras-2-nouv_mapped_to_genome_SJ.out.tab
123.98 kB
STAR
ras-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
272.55 MB
ras-3_mapped_to_genome.bam
1.75 GB
ras-3_mapped_to_genome.bam.bai
2.68 MB
ras-3_mapped_to_genome_stats.txt
1.82 kB
ras-3_mapped_to_genome_SJ.out.tab
5.06 MB
STAR
ev-3-nouv_mapped_to_genome.bam
4.14 MB
ev-3-nouv_mapped_to_genome_SJ.out.tab
22.19 kB
ev-3-nouv_mapped_to_genome_stats.txt
1.79 kB
ev-3-nouv_mapped_to_genome.bam.bai
1.54 MB
ev-3-nouv_mapped_to_genome.bw
4.66 kB
ev-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.79 MB
STAR
ev-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
8.08 MB
ev-2-nouv_mapped_to_genome.bam.bai
1.60 MB
ev-2-nouv_mapped_to_genome.bam
13.65 MB
ev-2-nouv_mapped_to_genome_stats.txt
1.79 kB
ev-2-nouv_mapped_to_genome_SJ.out.tab
16.34 kB
ev-2-nouv_mapped_to_genome.bw
4.49 kB
STAR
ev-1-nouv_mapped_to_genome.bam.bai
1.89 MB
ev-1-nouv_mapped_to_genome.bam
32.09 MB
ev-1-nouv_mapped_to_genome_SJ.out.tab
34.52 kB
ev-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.24 MB
ev-1-nouv_mapped_to_genome_stats.txt
1.80 kB
ev-1-nouv_mapped_to_genome.bw
5.01 kB
STAR
ras-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
177.82 MB
ras-1_mapped_to_genome.bam.bai
2.61 MB
ras-1_mapped_to_genome_stats.txt
1.82 kB
ras-1_mapped_to_genome.bam
1.34 GB
ras-1_mapped_to_genome_SJ.out.tab
4.39 MB
STAR
ras-2_mapped_to_genome.bam
2.31 GB
ras-2_mapped_to_genome.bam.bai
3.00 MB
ras-2_mapped_to_genome_SJ.out.tab
6.11 MB
ras-2_mapped_to_genome_stats.txt
1.82 kB
ras-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
332.11 MB
STAR
ev-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
76.31 MB
ev-1_mapped_to_genome.bam.bai
3.77 MB
ev-1_mapped_to_genome.bam
388.04 MB
ev-1_mapped_to_genome_stats.txt
1.81 kB
ev-1_mapped_to_genome_SJ.out.tab
776.91 kB
iCount xlsites
ras-3-nouv_mapped_to_genome_single.bedgraph
1.04 MB
ras-3-nouv_mapped_to_genome_skipped.bam
1.55 kB
ras-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
791.89 kB
ras-3-nouv_mapped_to_genome_reads_single.bed.gz
301.04 kB
ras-3-nouv_mapped_to_genome_single.bed.gz
268.50 kB
iCount RNA-maps
ras-3-nouv_mapped_to_genome_single.tar.gz
527.42 kB
STAR
ev-3_mapped_to_genome.bam
1.07 GB
ev-3_mapped_to_genome_stats.txt
1.82 kB
ev-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
191.35 MB
ev-3_mapped_to_genome.bam.bai
2.61 MB
ev-3_mapped_to_genome_SJ.out.tab
3.65 MB
iCount xlsites
ras-1-nouv_mapped_to_genome_single.bed.gz
114.18 kB
ras-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ras-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
402.11 kB
ras-1-nouv_mapped_to_genome_reads_single.bed.gz
126.68 kB
ras-1-nouv_mapped_to_genome_single.bedgraph
424.83 kB
iCount RNA-maps
ras-1-nouv_mapped_to_genome_single.tar.gz
413.92 kB
iCount xlsites
ras-2-nouv_mapped_to_genome_single.bed.gz
442.60 kB
ras-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
1.20 MB
ras-2-nouv_mapped_to_genome_reads_single.bed.gz
498.50 kB
ras-2-nouv_mapped_to_genome_skipped.bam
1.57 kB
ras-2-nouv_mapped_to_genome_single.bedgraph
1.77 MB
STAR
ev-2_mapped_to_genome.bam.bai
3.75 MB
ev-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
134.67 MB
ev-2_mapped_to_genome.bam
651.59 MB
ev-2_mapped_to_genome_stats.txt
1.82 kB
ev-2_mapped_to_genome_SJ.out.tab
983.74 kB
iCount xlsites
ev-3-nouv_mapped_to_genome_reads_single.bed.gz
79.15 kB
ev-3-nouv_mapped_to_genome_skipped.bam
1.38 kB
ev-3-nouv_mapped_to_genome_single.bed.gz
70.87 kB
ev-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
141.26 kB
ev-3-nouv_mapped_to_genome_single.bedgraph
264.00 kB
iCount xlsites
ev-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
155.95 kB
ev-2-nouv_mapped_to_genome_reads_single.bed.gz
65.65 kB
ev-2-nouv_mapped_to_genome_single.bed.gz
57.88 kB
ev-2-nouv_mapped_to_genome_single.bedgraph
207.66 kB
ev-2-nouv_mapped_to_genome_skipped.bam
1.38 kB
iCount xlsites
ev-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ev-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
316.93 kB
ev-1-nouv_mapped_to_genome_reads_single.bed.gz
122.91 kB
ev-1-nouv_mapped_to_genome_single.bed.gz
106.10 kB
ev-1-nouv_mapped_to_genome_single.bedgraph
388.03 kB
iCount xlsites
ras-1_mapped_to_genome_single.bed.gz
25.72 MB
ras-1_mapped_to_genome_reads_single.bed.gz
28.74 MB
ras-1_mapped_to_genome_single.bedgraph
122.58 MB
ras-1_mapped_to_genome_singleAndMulti.bed.gz
52.92 MB
ras-1_mapped_to_genome_skipped.bam
17.57 kB
iCount xlsites
ev-1_mapped_to_genome_singleAndMulti.bed.gz
5.72 MB
ev-1_mapped_to_genome_single.bed.gz
2.02 MB
ev-1_mapped_to_genome_skipped.bam
2.96 kB
ev-1_mapped_to_genome_single.bedgraph
8.82 MB
ev-1_mapped_to_genome_reads_single.bed.gz
2.41 MB
iCount summary
ras-3-nouv_mapped_to_genome_single_summary_subtype.tsv
1008 B
ras-3-nouv_mapped_to_genome_single_summary_type.tsv
460 B
ras-3-nouv_mapped_to_genome_single_summary_gene.tsv
660.29 kB
Paraclu
ev-1_mapped_to_genome_single_peaks.bed.gz
28.88 kB
iCount xlsites
ras-3_mapped_to_genome_single.bedgraph
147.82 MB
ras-3_mapped_to_genome_skipped.bam
27.66 kB
ras-3_mapped_to_genome_single.bed.gz
31.05 MB
ras-3_mapped_to_genome_singleAndMulti.bed.gz
65.22 MB
ras-3_mapped_to_genome_reads_single.bed.gz
34.73 MB
iCount xlsites
ev-3_mapped_to_genome_skipped.bam
11.47 kB
ev-3_mapped_to_genome_singleAndMulti.bed.gz
40.17 MB
ev-3_mapped_to_genome_single.bed.gz
16.58 MB
ev-3_mapped_to_genome_reads_single.bed.gz
18.60 MB
ev-3_mapped_to_genome_single.bedgraph
78.90 MB
iCount summary
ras-1-nouv_mapped_to_genome_single_summary_type.tsv
443 B
ras-1-nouv_mapped_to_genome_single_summary_gene.tsv
430.05 kB
ras-1-nouv_mapped_to_genome_single_summary_subtype.tsv
926 B
iCount summary
ras-2-nouv_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
ras-2-nouv_mapped_to_genome_single_summary_type.tsv
464 B
ras-2-nouv_mapped_to_genome_single_summary_gene.tsv
840.17 kB
iCount xlsites
ras-2_mapped_to_genome_singleAndMulti.bed.gz
87.60 MB
ras-2_mapped_to_genome_single.bed.gz
42.76 MB
ras-2_mapped_to_genome_skipped.bam
29.08 kB
ras-2_mapped_to_genome_single.bedgraph
203.69 MB
ras-2_mapped_to_genome_reads_single.bed.gz
47.54 MB
iCount xlsites
ev-2_mapped_to_genome_single.bed.gz
2.86 MB
ev-2_mapped_to_genome_skipped.bam
3.30 kB
ev-2_mapped_to_genome_singleAndMulti.bed.gz
9.13 MB
ev-2_mapped_to_genome_reads_single.bed.gz
3.38 MB
ev-2_mapped_to_genome_single.bedgraph
12.41 MB
iCount summary
ev-3-nouv_mapped_to_genome_single_summary_type.tsv
445 B
ev-3-nouv_mapped_to_genome_single_summary_subtype.tsv
989 B
ev-3-nouv_mapped_to_genome_single_summary_gene.tsv
328.83 kB
Paraclu
ev-3-nouv_mapped_to_genome_single_peaks.bed.gz
244 B
Paraclu
ev-2-nouv_mapped_to_genome_single_peaks.bed.gz
184 B
iCount summary
ev-1-nouv_mapped_to_genome_single_summary_subtype.tsv
940 B
ev-1-nouv_mapped_to_genome_single_summary_type.tsv
455 B
ev-1-nouv_mapped_to_genome_single_summary_gene.tsv
420.91 kB
iCount summary
ras-1_mapped_to_genome_single_summary_type.tsv
485 B
ras-1_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ras-1_mapped_to_genome_single_summary_gene.tsv
2.43 MB
iCount summary
ras-3_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ras-3_mapped_to_genome_single_summary_type.tsv
483 B
ras-3_mapped_to_genome_single_summary_gene.tsv
2.58 MB
PEKA
ras-1-nouv_mapped_to_genome
Directory
ras-1-nouv_mapped_to_genome.tar.gz
189.39 kB
Paraclu
ev-2_mapped_to_genome_single_peaks.bed.gz
44.61 kB
iCount RNA-maps
ras-2_mapped_to_genome_single.tar.gz
4.57 MB
PEKA
ras-3-nouv_mapped_to_genome
Directory
ras-3-nouv_mapped_to_genome.tar.gz
275.78 kB
PEKA
ev-2-nouv_mapped_to_genome.tar.gz
193.84 kB
ev-2-nouv_mapped_to_genome
Directory
PEKA
ev-1-nouv_mapped_to_genome
Directory
ev-1-nouv_mapped_to_genome.tar.gz
278.03 kB
PEKA
ev-3_mapped_to_genome
Directory
ev-3_mapped_to_genome.tar.gz
544.69 kB
PEKA
ras-2_mapped_to_genome
Directory
ras-2_mapped_to_genome.tar.gz
601.67 kB
iCount peaks
ni-1-nouv_mapped_to_genome_single_peaks.bed.gz
1.61 kB
ni-1-nouv_mapped_to_genome_single_scores.tsv.gz
59.88 kB
ni-1-nouv_mapped_to_genome_single_peaks.bedgraph
1.47 kB
iCount peaks
ni-3-nouv_mapped_to_genome_single_scores.tsv.gz
70.51 kB
ni-3-nouv_mapped_to_genome_single_peaks.bed.gz
6.09 kB
ni-3-nouv_mapped_to_genome_single_peaks.bedgraph
6.64 kB
iCount peaks
ni-2-nouv_mapped_to_genome_single_peaks.bed.gz
23.71 kB
ni-2-nouv_mapped_to_genome_single_scores.tsv.gz
610.30 kB
ni-2-nouv_mapped_to_genome_single_peaks.bedgraph
26.61 kB
iCount peaks
ni-2_mapped_to_genome_single_peaks.bed.gz
3.64 MB
ni-2_mapped_to_genome_single_scores.tsv.gz
39.34 MB
ni-2_mapped_to_genome_single_peaks.bedgraph
13.16 MB
iCount peaks
ras-3-nouv_mapped_to_genome_single_peaks.bed.gz
25.83 kB
ras-3-nouv_mapped_to_genome_single_scores.tsv.gz
658.72 kB
ras-3-nouv_mapped_to_genome_single_peaks.bedgraph
31.52 kB
iCount peaks
ras-2-nouv_mapped_to_genome_single_peaks.bed.gz
43.05 kB
ras-2-nouv_mapped_to_genome_single_scores.tsv.gz
1.03 MB
ras-2-nouv_mapped_to_genome_single_peaks.bedgraph
54.98 kB
iCount peaks
ni-3_mapped_to_genome_single_peaks.bed.gz
1.12 MB
ni-3_mapped_to_genome_single_peaks.bedgraph
3.47 MB
ni-3_mapped_to_genome_single_scores.tsv.gz
14.67 MB
iCount peaks
ras-1-nouv_mapped_to_genome_single_scores.tsv.gz
295.66 kB
ras-1-nouv_mapped_to_genome_single_peaks.bed.gz
12.67 kB
ras-1-nouv_mapped_to_genome_single_peaks.bedgraph
13.26 kB
iCount peaks
ras-2_mapped_to_genome_single_peaks.bed.gz
6.71 MB
ras-2_mapped_to_genome_single_scores.tsv.gz
91.35 MB
ras-2_mapped_to_genome_single_peaks.bedgraph
25.57 MB
iCount peaks
ni-1_mapped_to_genome_single_peaks.bed.gz
2.20 MB
ni-1_mapped_to_genome_single_peaks.bedgraph
7.88 MB
ni-1_mapped_to_genome_single_scores.tsv.gz
39.08 MB
iCount peaks
ev-1-nouv_mapped_to_genome_single_peaks.bedgraph
37.29 kB
ev-1-nouv_mapped_to_genome_single_scores.tsv.gz
286.92 kB
ev-1-nouv_mapped_to_genome_single_peaks.bed.gz
37.88 kB
iCount peaks
ev-3-nouv_mapped_to_genome_single_peaks.bed.gz
5.93 kB
ev-3-nouv_mapped_to_genome_single_peaks.bedgraph
6.10 kB
ev-3-nouv_mapped_to_genome_single_scores.tsv.gz
206.50 kB
iCount peaks
ras-1_mapped_to_genome_single_peaks.bed.gz
3.64 MB
ras-1_mapped_to_genome_single_scores.tsv.gz
54.28 MB
ras-1_mapped_to_genome_single_peaks.bedgraph
13.34 MB
iCount peaks
ev-1_mapped_to_genome_single_scores.tsv.gz
4.22 MB
ev-1_mapped_to_genome_single_peaks.bedgraph
810.18 kB
ev-1_mapped_to_genome_single_peaks.bed.gz
402.88 kB
iCount peaks
ras-3_mapped_to_genome_single_peaks.bedgraph
16.45 MB
ras-3_mapped_to_genome_single_scores.tsv.gz
65.02 MB
ras-3_mapped_to_genome_single_peaks.bed.gz
4.40 MB
iCount peaks
ev-2-nouv_mapped_to_genome_single_peaks.bedgraph
14.49 kB
ev-2-nouv_mapped_to_genome_single_scores.tsv.gz
163.08 kB
ev-2-nouv_mapped_to_genome_single_peaks.bed.gz
14.46 kB
iCount peaks
ev-2_mapped_to_genome_single_peaks.bed.gz
591.09 kB
ev-2_mapped_to_genome_single_scores.tsv.gz
5.80 MB
ev-2_mapped_to_genome_single_peaks.bedgraph
1.20 MB
iCount peaks
ev-3_mapped_to_genome_single_peaks.bed.gz
2.67 MB
ev-3_mapped_to_genome_single_scores.tsv.gz
33.53 MB
ev-3_mapped_to_genome_single_peaks.bedgraph
9.53 MB
NI_1
FASTQ file (single-end)
ni-1_fastqc.zip
387.96 kB
iCLIP reads proxy
ni-1_mapped_to_genome.fastq.gz
750.42 MB
iCount RNA-maps
ni-1_mapped_to_genome_single.tar.gz
3.13 MB
Paraclu
ni-1_mapped_to_genome_single_peaks.bed.gz
430.78 kB
Cutadapt (single-end)
ni-1_trimmed.fastq.gz
883.37 MB
STAR
ni-1_trimmed_unmapped.out.mate1.fastq.gz
750.42 MB
ni-1_trimmed_stats.txt
1.79 kB
ni-1_trimmed_SJ.out.tab
0 B
ni-1_trimmed.bam.bai
22.65 kB
iCount xlsites
ni-1_premapped_to_ncRNAs_reads_single.bed.gz
200.18 kB
ni-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
471.83 kB
ni-1_premapped_to_ncRNAs_single.bed.gz
186.65 kB
ni-1_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-1_premapped_to_ncRNAs_single.bedgraph
156 B
STAR
ni-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
135.55 MB
ni-1_mapped_to_genome.bam.bai
2.73 MB
ni-1_mapped_to_genome.bam
992.93 MB
ni-1_mapped_to_genome_SJ.out.tab
3.50 MB
ni-1_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
ni-1_mapped_to_genome_skipped.bam
9.30 kB
ni-1_mapped_to_genome_single.bed.gz
18.58 MB
ni-1_mapped_to_genome_reads_single.bed.gz
21.12 MB
ni-1_mapped_to_genome_singleAndMulti.bed.gz
35.00 MB
ni-1_mapped_to_genome_single.bedgraph
88.35 MB
iCount summary
ni-1_mapped_to_genome_single_summary_type.tsv
481 B
ni-1_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ni-1_mapped_to_genome_single_summary_gene.tsv
2.21 MB
PEKA
ni-1_mapped_to_genome
Directory
ni-1_mapped_to_genome.tar.gz
547.67 kB
iCount peaks
ni-1_mapped_to_genome_single_peaks.bed.gz
2.20 MB
ni-1_mapped_to_genome_single_peaks.bedgraph
7.88 MB
ni-1_mapped_to_genome_single_scores.tsv.gz
39.08 MB
NI_1_noUV
FASTQ file (single-end)
ni-1-nouv.fastq.gz
2.53 MB
ni-1-nouv_fastqc.zip
542.32 kB
Cutadapt (single-end)
ni-1-nouv_trimmed.fastq.gz
2.33 MB
iCLIP reads proxy
ni-1-nouv_mapped_to_genome.fastq.gz
1.57 MB
Paraclu
ni-1-nouv_mapped_to_genome_single_peaks.bed.gz
92 B
iCount RNA-maps
ni-1-nouv_mapped_to_genome_single.tar.gz
339.31 kB
PEKA
ni-1-nouv_mapped_to_genome.tar.gz
135 B
STAR
ni-1-nouv_trimmed_stats.txt
1.78 kB
ni-1-nouv_trimmed.bam.bai
19.13 kB
ni-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
1.57 MB
ni-1-nouv_trimmed.bam
3.24 MB
ni-1-nouv_trimmed.bw
274.79 kB
ni-1-nouv_trimmed_SJ.out.tab
0 B
iCount xlsites
ni-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
28.81 kB
ni-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
13.23 kB
ni-1-nouv_premapped_to_ncRNAs_single.bed.gz
12.11 kB
ni-1-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
STAR
ni-1-nouv_mapped_to_genome.bam.bai
1.45 MB
ni-1-nouv_mapped_to_genome.bam
2.35 MB
ni-1-nouv_mapped_to_genome_SJ.out.tab
5.64 kB
ni-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.10 MB
ni-1-nouv_mapped_to_genome_stats.txt
1.79 kB
ni-1-nouv_mapped_to_genome.bw
4.44 kB
iCount xlsites
ni-1-nouv_mapped_to_genome_single.bed.gz
19.09 kB
ni-1-nouv_mapped_to_genome_single.bedgraph
64.63 kB
ni-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
76.63 kB
ni-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ni-1-nouv_mapped_to_genome_reads_single.bed.gz
21.27 kB
iCount summary
ni-1-nouv_mapped_to_genome_single_summary_gene.tsv
117.13 kB
ni-1-nouv_mapped_to_genome_single_summary_type.tsv
438 B
ni-1-nouv_mapped_to_genome_single_summary_subtype.tsv
910 B
iCount peaks
ni-1-nouv_mapped_to_genome_single_peaks.bed.gz
1.61 kB
ni-1-nouv_mapped_to_genome_single_scores.tsv.gz
59.88 kB
ni-1-nouv_mapped_to_genome_single_peaks.bedgraph
1.47 kB
NI_3_noUV
FASTQ file (single-end)
ni-3-nouv.fastq.gz
9.05 MB
ni-3-nouv_fastqc.zip
502.91 kB
iCount RNA-maps
ni-3-nouv_mapped_to_genome_single.tar.gz
334.21 kB
PEKA
ni-3-nouv_mapped_to_genome.tar.gz
134 B
Cutadapt (single-end)
ni-3-nouv_trimmed.fastq.gz
7.11 MB
STAR
ni-3-nouv_trimmed.bam.bai
19.38 kB
ni-3-nouv_trimmed_SJ.out.tab
0 B
ni-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
6.33 MB
ni-3-nouv_trimmed_stats.txt
1.78 kB
ni-3-nouv_trimmed.bw
274.98 kB
ni-3-nouv_trimmed.bam
9.27 MB
iCLIP reads proxy
ni-3-nouv_mapped_to_genome.fastq.gz
6.33 MB
iCount xlsites
ni-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
12.23 kB
ni-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
27.13 kB
ni-3-nouv_premapped_to_ncRNAs_single.bed.gz
10.78 kB
ni-3-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
STAR
ni-3-nouv_mapped_to_genome.bam
10.91 MB
ni-3-nouv_mapped_to_genome.bam.bai
1.79 MB
ni-3-nouv_mapped_to_genome_stats.txt
1.79 kB
ni-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
4.53 MB
ni-3-nouv_mapped_to_genome.bw
4.74 kB
ni-3-nouv_mapped_to_genome_SJ.out.tab
8.82 kB
iCount xlsites
ni-3-nouv_mapped_to_genome_skipped.bam
1.38 kB
ni-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
251.70 kB
ni-3-nouv_mapped_to_genome_single.bedgraph
123.16 kB
ni-3-nouv_mapped_to_genome_single.bed.gz
36.42 kB
ni-3-nouv_mapped_to_genome_reads_single.bed.gz
40.11 kB
iCount summary
ni-3-nouv_mapped_to_genome_single_summary_subtype.tsv
924 B
ni-3-nouv_mapped_to_genome_single_summary_type.tsv
441 B
ni-3-nouv_mapped_to_genome_single_summary_gene.tsv
123.22 kB
Paraclu
ni-3-nouv_mapped_to_genome_single_peaks.bed.gz
229 B
iCount peaks
ni-3-nouv_mapped_to_genome_single_scores.tsv.gz
70.51 kB
ni-3-nouv_mapped_to_genome_single_peaks.bed.gz
6.09 kB
ni-3-nouv_mapped_to_genome_single_peaks.bedgraph
6.64 kB
demux_nomatch.fastq.gz
FASTQ file (single-end)
demux_nomatch.fastq.gz
2.83 GB
demux_nomatch_fastqc.zip
461.37 kB
EV_3_noUV
FASTQ file (single-end)
ev-3-nouv.fastq.gz
5.51 MB
ev-3-nouv_fastqc.zip
490.36 kB
Cutadapt (single-end)
ev-3-nouv_trimmed.fastq.gz
5.32 MB
iCLIP reads proxy
ev-3-nouv_mapped_to_genome.fastq.gz
3.17 MB
iCount RNA-maps
ev-3-nouv_mapped_to_genome_single.tar.gz
412.88 kB
PEKA
ev-3-nouv_mapped_to_genome.tar.gz
62.36 kB
ev-3-nouv_mapped_to_genome
Directory
STAR
ev-3-nouv_trimmed.bam
6.85 MB
ev-3-nouv_trimmed_SJ.out.tab
0 B
ev-3-nouv_trimmed.bam.bai
19.77 kB
ev-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
3.17 MB
ev-3-nouv_trimmed_stats.txt
1.78 kB
ev-3-nouv_trimmed.bw
275.03 kB
iCount xlsites
ev-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
48.25 kB
ev-3-nouv_premapped_to_ncRNAs_single.bed.gz
26.81 kB
ev-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
28.79 kB
ev-3-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ev-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
STAR
ev-3-nouv_mapped_to_genome.bam
4.14 MB
ev-3-nouv_mapped_to_genome_SJ.out.tab
22.19 kB
ev-3-nouv_mapped_to_genome_stats.txt
1.79 kB
ev-3-nouv_mapped_to_genome.bam.bai
1.54 MB
ev-3-nouv_mapped_to_genome.bw
4.66 kB
ev-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.79 MB
iCount xlsites
ev-3-nouv_mapped_to_genome_reads_single.bed.gz
79.15 kB
ev-3-nouv_mapped_to_genome_skipped.bam
1.38 kB
ev-3-nouv_mapped_to_genome_single.bed.gz
70.87 kB
ev-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
141.26 kB
ev-3-nouv_mapped_to_genome_single.bedgraph
264.00 kB
iCount summary
ev-3-nouv_mapped_to_genome_single_summary_type.tsv
445 B
ev-3-nouv_mapped_to_genome_single_summary_subtype.tsv
989 B
ev-3-nouv_mapped_to_genome_single_summary_gene.tsv
328.83 kB
Paraclu
ev-3-nouv_mapped_to_genome_single_peaks.bed.gz
244 B
iCount peaks
ev-3-nouv_mapped_to_genome_single_peaks.bed.gz
5.93 kB
ev-3-nouv_mapped_to_genome_single_peaks.bedgraph
6.10 kB
ev-3-nouv_mapped_to_genome_single_scores.tsv.gz
206.50 kB
Ras_1
FASTQ file (single-end)
ras-1_fastqc.zip
394.64 kB
Paraclu
ras-1_mapped_to_genome_single_peaks.bed.gz
654.45 kB
iCount RNA-maps
ras-1_mapped_to_genome_single.tar.gz
3.73 MB
Cutadapt (single-end)
ras-1_trimmed.fastq.gz
1.13 GB
STAR
ras-1_trimmed_unmapped.out.mate1.fastq.gz
959.68 MB
ras-1_trimmed.bam
1.56 GB
ras-1_trimmed.bam.bai
22.66 kB
ras-1_trimmed_stats.txt
1.79 kB
ras-1_trimmed_SJ.out.tab
0 B
iCount xlsites
ras-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
664.88 kB
ras-1_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-1_premapped_to_ncRNAs_single.bedgraph
158 B
ras-1_premapped_to_ncRNAs_reads_single.bed.gz
256.48 kB
ras-1_premapped_to_ncRNAs_single.bed.gz
241.30 kB
iCLIP reads proxy
ras-1_mapped_to_genome.fastq.gz
959.68 MB
STAR
ras-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
177.82 MB
ras-1_mapped_to_genome.bam.bai
2.61 MB
ras-1_mapped_to_genome_stats.txt
1.82 kB
ras-1_mapped_to_genome.bam
1.34 GB
ras-1_mapped_to_genome_SJ.out.tab
4.39 MB
iCount xlsites
ras-1_mapped_to_genome_single.bed.gz
25.72 MB
ras-1_mapped_to_genome_reads_single.bed.gz
28.74 MB
ras-1_mapped_to_genome_single.bedgraph
122.58 MB
ras-1_mapped_to_genome_singleAndMulti.bed.gz
52.92 MB
ras-1_mapped_to_genome_skipped.bam
17.57 kB
iCount summary
ras-1_mapped_to_genome_single_summary_type.tsv
485 B
ras-1_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ras-1_mapped_to_genome_single_summary_gene.tsv
2.43 MB
PEKA
ras-1_mapped_to_genome
Directory
ras-1_mapped_to_genome.tar.gz
580.50 kB
iCount peaks
ras-1_mapped_to_genome_single_peaks.bed.gz
3.64 MB
ras-1_mapped_to_genome_single_scores.tsv.gz
54.28 MB
ras-1_mapped_to_genome_single_peaks.bedgraph
13.34 MB
Ras_3
FASTQ file (single-end)
ras-3_fastqc.zip
390.88 kB
iCLIP reads proxy
ras-3_mapped_to_genome.fastq.gz
1.23 GB
Paraclu
ras-3_mapped_to_genome_single_peaks.bed.gz
756.70 kB
iCount RNA-maps
ras-3_mapped_to_genome_single.tar.gz
4.00 MB
PEKA
ras-3_mapped_to_genome
Directory
ras-3_mapped_to_genome.tar.gz
583.40 kB
Cutadapt (single-end)
ras-3_trimmed.fastq.gz
1.51 GB
STAR
ras-3_trimmed_unmapped.out.mate1.fastq.gz
1.23 GB
ras-3_trimmed.bam.bai
22.68 kB
ras-3_trimmed_SJ.out.tab
0 B
ras-3_trimmed.bam
2.10 GB
ras-3_trimmed_stats.txt
1.79 kB
iCount xlsites
ras-3_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-3_premapped_to_ncRNAs_reads_single.bed.gz
276.60 kB
ras-3_premapped_to_ncRNAs_single.bed.gz
261.38 kB
ras-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
707.14 kB
ras-3_premapped_to_ncRNAs_single.bedgraph
158 B
STAR
ras-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
272.55 MB
ras-3_mapped_to_genome.bam
1.75 GB
ras-3_mapped_to_genome.bam.bai
2.68 MB
ras-3_mapped_to_genome_stats.txt
1.82 kB
ras-3_mapped_to_genome_SJ.out.tab
5.06 MB
iCount xlsites
ras-3_mapped_to_genome_single.bedgraph
147.82 MB
ras-3_mapped_to_genome_skipped.bam
27.66 kB
ras-3_mapped_to_genome_single.bed.gz
31.05 MB
ras-3_mapped_to_genome_singleAndMulti.bed.gz
65.22 MB
ras-3_mapped_to_genome_reads_single.bed.gz
34.73 MB
iCount summary
ras-3_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ras-3_mapped_to_genome_single_summary_type.tsv
483 B
ras-3_mapped_to_genome_single_summary_gene.tsv
2.58 MB
iCount peaks
ras-3_mapped_to_genome_single_peaks.bedgraph
16.45 MB
ras-3_mapped_to_genome_single_scores.tsv.gz
65.02 MB
ras-3_mapped_to_genome_single_peaks.bed.gz
4.40 MB
Ras_1_noUV
FASTQ file (single-end)
ras-1-nouv.fastq.gz
16.86 MB
ras-1-nouv_fastqc.zip
542.19 kB
iCLIP reads proxy
ras-1-nouv_mapped_to_genome.fastq.gz
9.69 MB
Paraclu
ras-1-nouv_mapped_to_genome_single_peaks.bed.gz
594 B
Cutadapt (single-end)
ras-1-nouv_trimmed.fastq.gz
16.28 MB
STAR
ras-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
9.69 MB
ras-1-nouv_trimmed.bam
26.44 MB
ras-1-nouv_trimmed.bam.bai
21.98 kB
ras-1-nouv_trimmed.bw
276.29 kB
ras-1-nouv_trimmed_SJ.out.tab
0 B
ras-1-nouv_trimmed_stats.txt
1.78 kB
iCount xlsites
ras-1-nouv_premapped_to_ncRNAs_single.bed.gz
42.37 kB
ras-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
98.71 kB
ras-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
45.24 kB
ras-1-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
STAR
ras-1-nouv_mapped_to_genome.bam.bai
2.05 MB
ras-1-nouv_mapped_to_genome.bam
14.70 MB
ras-1-nouv_mapped_to_genome_stats.txt
1.80 kB
ras-1-nouv_mapped_to_genome_SJ.out.tab
33.61 kB
ras-1-nouv_mapped_to_genome.bw
5.34 kB
ras-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
6.82 MB
iCount xlsites
ras-1-nouv_mapped_to_genome_single.bed.gz
114.18 kB
ras-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ras-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
402.11 kB
ras-1-nouv_mapped_to_genome_reads_single.bed.gz
126.68 kB
ras-1-nouv_mapped_to_genome_single.bedgraph
424.83 kB
iCount RNA-maps
ras-1-nouv_mapped_to_genome_single.tar.gz
413.92 kB
iCount summary
ras-1-nouv_mapped_to_genome_single_summary_type.tsv
443 B
ras-1-nouv_mapped_to_genome_single_summary_gene.tsv
430.05 kB
ras-1-nouv_mapped_to_genome_single_summary_subtype.tsv
926 B
PEKA
ras-1-nouv_mapped_to_genome
Directory
ras-1-nouv_mapped_to_genome.tar.gz
189.39 kB
iCount peaks
ras-1-nouv_mapped_to_genome_single_scores.tsv.gz
295.66 kB
ras-1-nouv_mapped_to_genome_single_peaks.bed.gz
12.67 kB
ras-1-nouv_mapped_to_genome_single_peaks.bedgraph
13.26 kB
demux_nomatch.fastq.gz
FASTQ file (single-end)
demux_nomatch.fastq.gz
496.32 MB
demux_nomatch_fastqc.zip
414.52 kB
NI_2
FASTQ file (single-end)
ni-2_fastqc.zip
397.04 kB
iCLIP reads proxy
ni-2_mapped_to_genome.fastq.gz
1.01 GB
iCount xlsites
ni-2_mapped_to_genome_single.bed.gz
19.56 MB
ni-2_mapped_to_genome_skipped.bam
13.35 kB
ni-2_mapped_to_genome_single.bedgraph
93.80 MB
ni-2_mapped_to_genome_singleAndMulti.bed.gz
34.54 MB
ni-2_mapped_to_genome_reads_single.bed.gz
22.16 MB
iCount RNA-maps
ni-2_mapped_to_genome_single.tar.gz
3.61 MB
Cutadapt (single-end)
ni-2_trimmed.fastq.gz
1.33 GB
STAR
ni-2_trimmed_unmapped.out.mate1.fastq.gz
1.01 GB
ni-2_trimmed.bam.bai
22.63 kB
ni-2_trimmed_stats.txt
1.79 kB
ni-2_trimmed_SJ.out.tab
0 B
iCount xlsites
ni-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
392.46 kB
ni-2_premapped_to_ncRNAs_single.bed.gz
157.14 kB
ni-2_premapped_to_ncRNAs_reads_single.bed.gz
169.14 kB
ni-2_premapped_to_ncRNAs_single.bedgraph
156 B
ni-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
STAR
ni-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
192.02 MB
ni-2_mapped_to_genome.bam.bai
2.65 MB
ni-2_mapped_to_genome_stats.txt
1.82 kB
ni-2_mapped_to_genome.bam
1.33 GB
ni-2_mapped_to_genome_SJ.out.tab
4.15 MB
iCount summary
ni-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ni-2_mapped_to_genome_single_summary_type.tsv
480 B
ni-2_mapped_to_genome_single_summary_gene.tsv
2.35 MB
Paraclu
ni-2_mapped_to_genome_single_peaks.bed.gz
666.97 kB
PEKA
ni-2_mapped_to_genome
Directory
ni-2_mapped_to_genome.tar.gz
558.37 kB
iCount peaks
ni-2_mapped_to_genome_single_peaks.bed.gz
3.64 MB
ni-2_mapped_to_genome_single_scores.tsv.gz
39.34 MB
ni-2_mapped_to_genome_single_peaks.bedgraph
13.16 MB
NI_2_noUV
FASTQ file (single-end)
ni-2-nouv.fastq.gz
57.89 MB
ni-2-nouv_fastqc.zip
528.57 kB
iCount RNA-maps
ni-2-nouv_mapped_to_genome_single.tar.gz
547.15 kB
Paraclu
ni-2-nouv_mapped_to_genome_single_peaks.bed.gz
1.68 kB
Cutadapt (single-end)
ni-2-nouv_trimmed.fastq.gz
51.94 MB
STAR
ni-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
39.35 MB
ni-2-nouv_trimmed.bam.bai
22.60 kB
ni-2-nouv_trimmed.bam
71.49 MB
ni-2-nouv_trimmed_stats.txt
1.78 kB
ni-2-nouv_trimmed.bw
276.96 kB
ni-2-nouv_trimmed_SJ.out.tab
0 B
iCount xlsites
ni-2-nouv_premapped_to_ncRNAs_single.bed.gz
48.20 kB
ni-2-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ni-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
100.51 kB
ni-2-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ni-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
52.50 kB
iCLIP reads proxy
ni-2-nouv_mapped_to_genome.fastq.gz
39.35 MB
STAR
ni-2-nouv_mapped_to_genome.bam.bai
2.36 MB
ni-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
29.83 MB
ni-2-nouv_mapped_to_genome_stats.txt
1.80 kB
ni-2-nouv_mapped_to_genome.bw
5.48 kB
ni-2-nouv_mapped_to_genome.bam
52.98 MB
ni-2-nouv_mapped_to_genome_SJ.out.tab
94.23 kB
iCount xlsites
ni-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
722.00 kB
ni-2-nouv_mapped_to_genome_single.bed.gz
254.80 kB
ni-2-nouv_mapped_to_genome_skipped.bam
1.85 kB
ni-2-nouv_mapped_to_genome_reads_single.bed.gz
291.18 kB
ni-2-nouv_mapped_to_genome_single.bedgraph
1008.52 kB
iCount summary
ni-2-nouv_mapped_to_genome_single_summary_subtype.tsv
1016 B
ni-2-nouv_mapped_to_genome_single_summary_type.tsv
459 B
ni-2-nouv_mapped_to_genome_single_summary_gene.tsv
658.42 kB
PEKA
ni-2-nouv_mapped_to_genome
Directory
ni-2-nouv_mapped_to_genome.tar.gz
270.32 kB
iCount peaks
ni-2-nouv_mapped_to_genome_single_peaks.bed.gz
23.71 kB
ni-2-nouv_mapped_to_genome_single_scores.tsv.gz
610.30 kB
ni-2-nouv_mapped_to_genome_single_peaks.bedgraph
26.61 kB
EV_2
FASTQ file (single-end)
ev-2_fastqc.zip
424.02 kB
iCount summary
ev-2_mapped_to_genome_single_summary_type.tsv
480 B
ev-2_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ev-2_mapped_to_genome_single_summary_gene.tsv
1.55 MB
iCount RNA-maps
ev-2_mapped_to_genome_single.tar.gz
1.25 MB
PEKA
ev-2_mapped_to_genome
Directory
ev-2_mapped_to_genome.tar.gz
450.20 kB
Cutadapt (single-end)
ev-2_trimmed.fastq.gz
633.14 MB
STAR
ev-2_trimmed.bam.bai
22.76 kB
ev-2_trimmed.bam
876.04 MB
ev-2_trimmed_SJ.out.tab
0 B
ev-2_trimmed_stats.txt
1.79 kB
ev-2_trimmed_unmapped.out.mate1.fastq.gz
499.12 MB
iCount xlsites
ev-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-2_premapped_to_ncRNAs_reads_single.bed.gz
170.33 kB
ev-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
469.10 kB
ev-2_premapped_to_ncRNAs_single.bed.gz
149.26 kB
ev-2_premapped_to_ncRNAs_single.bedgraph
156 B
iCLIP reads proxy
ev-2_mapped_to_genome.fastq.gz
499.12 MB
STAR
ev-2_mapped_to_genome.bam.bai
3.75 MB
ev-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
134.67 MB
ev-2_mapped_to_genome.bam
651.59 MB
ev-2_mapped_to_genome_stats.txt
1.82 kB
ev-2_mapped_to_genome_SJ.out.tab
983.74 kB
iCount xlsites
ev-2_mapped_to_genome_single.bed.gz
2.86 MB
ev-2_mapped_to_genome_skipped.bam
3.30 kB
ev-2_mapped_to_genome_singleAndMulti.bed.gz
9.13 MB
ev-2_mapped_to_genome_reads_single.bed.gz
3.38 MB
ev-2_mapped_to_genome_single.bedgraph
12.41 MB
Paraclu
ev-2_mapped_to_genome_single_peaks.bed.gz
44.61 kB
iCount peaks
ev-2_mapped_to_genome_single_peaks.bed.gz
591.09 kB
ev-2_mapped_to_genome_single_scores.tsv.gz
5.80 MB
ev-2_mapped_to_genome_single_peaks.bedgraph
1.20 MB
EV_3
FASTQ file (single-end)
ev-3_fastqc.zip
407.83 kB
iCount summary
ev-3_mapped_to_genome_single_summary_type.tsv
485 B
ev-3_mapped_to_genome_single_summary_gene.tsv
2.29 MB
ev-3_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
Paraclu
ev-3_mapped_to_genome_single_peaks.bed.gz
480.04 kB
iCount RNA-maps
ev-3_mapped_to_genome_single.tar.gz
3.12 MB
Cutadapt (single-end)
ev-3_trimmed.fastq.gz
888.71 MB
STAR
ev-3_trimmed_unmapped.out.mate1.fastq.gz
726.17 MB
ev-3_trimmed.bam.bai
22.66 kB
ev-3_trimmed_stats.txt
1.79 kB
ev-3_trimmed_SJ.out.tab
0 B
iCount xlsites
ev-3_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
676.50 kB
ev-3_premapped_to_ncRNAs_reads_single.bed.gz
251.83 kB
ev-3_premapped_to_ncRNAs_single.bed.gz
235.64 kB
ev-3_premapped_to_ncRNAs_single.bedgraph
156 B
iCLIP reads proxy
ev-3_mapped_to_genome.fastq.gz
726.17 MB
STAR
ev-3_mapped_to_genome.bam
1.07 GB
ev-3_mapped_to_genome_stats.txt
1.82 kB
ev-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
191.35 MB
ev-3_mapped_to_genome.bam.bai
2.61 MB
ev-3_mapped_to_genome_SJ.out.tab
3.65 MB
iCount xlsites
ev-3_mapped_to_genome_skipped.bam
11.47 kB
ev-3_mapped_to_genome_singleAndMulti.bed.gz
40.17 MB
ev-3_mapped_to_genome_single.bed.gz
16.58 MB
ev-3_mapped_to_genome_reads_single.bed.gz
18.60 MB
ev-3_mapped_to_genome_single.bedgraph
78.90 MB
PEKA
ev-3_mapped_to_genome
Directory
ev-3_mapped_to_genome.tar.gz
544.69 kB
iCount peaks
ev-3_mapped_to_genome_single_peaks.bed.gz
2.67 MB
ev-3_mapped_to_genome_single_scores.tsv.gz
33.53 MB
ev-3_mapped_to_genome_single_peaks.bedgraph
9.53 MB
EV_1_noUV
FASTQ file (single-end)
ev-1-nouv.fastq.gz
65.80 MB
ev-1-nouv_fastqc.zip
496.86 kB
Cutadapt (single-end)
ev-1-nouv_trimmed.fastq.gz
63.16 MB
iCLIP reads proxy
ev-1-nouv_mapped_to_genome.fastq.gz
26.50 MB
Paraclu
ev-1-nouv_mapped_to_genome_single_peaks.bed.gz
314 B
iCount RNA-maps
ev-1-nouv_mapped_to_genome_single.tar.gz
463.87 kB
STAR
ev-1-nouv_trimmed.bam
122.47 MB
ev-1-nouv_trimmed_unmapped.out.mate1.fastq.gz
26.50 MB
ev-1-nouv_trimmed_SJ.out.tab
0 B
ev-1-nouv_trimmed_stats.txt
1.79 kB
ev-1-nouv_trimmed.bam.bai
22.05 kB
iCount xlsites
ev-1-nouv_premapped_to_ncRNAs_single.bed.gz
39.78 kB
ev-1-nouv_premapped_to_ncRNAs_reads_single.bed.gz
45.40 kB
ev-1-nouv_premapped_to_ncRNAs_single.bedgraph
166 B
ev-1-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ev-1-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
107.40 kB
STAR
ev-1-nouv_mapped_to_genome.bam.bai
1.89 MB
ev-1-nouv_mapped_to_genome.bam
32.09 MB
ev-1-nouv_mapped_to_genome_SJ.out.tab
34.52 kB
ev-1-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.24 MB
ev-1-nouv_mapped_to_genome_stats.txt
1.80 kB
ev-1-nouv_mapped_to_genome.bw
5.01 kB
iCount xlsites
ev-1-nouv_mapped_to_genome_skipped.bam
1.38 kB
ev-1-nouv_mapped_to_genome_singleAndMulti.bed.gz
316.93 kB
ev-1-nouv_mapped_to_genome_reads_single.bed.gz
122.91 kB
ev-1-nouv_mapped_to_genome_single.bed.gz
106.10 kB
ev-1-nouv_mapped_to_genome_single.bedgraph
388.03 kB
iCount summary
ev-1-nouv_mapped_to_genome_single_summary_subtype.tsv
940 B
ev-1-nouv_mapped_to_genome_single_summary_type.tsv
455 B
ev-1-nouv_mapped_to_genome_single_summary_gene.tsv
420.91 kB
PEKA
ev-1-nouv_mapped_to_genome
Directory
ev-1-nouv_mapped_to_genome.tar.gz
278.03 kB
iCount peaks
ev-1-nouv_mapped_to_genome_single_peaks.bedgraph
37.29 kB
ev-1-nouv_mapped_to_genome_single_scores.tsv.gz
286.92 kB
ev-1-nouv_mapped_to_genome_single_peaks.bed.gz
37.88 kB
Ras_2
FASTQ file (single-end)
ras-2_fastqc.zip
392.65 kB
iCLIP reads proxy
ras-2_mapped_to_genome.fastq.gz
1.63 GB
iCount summary
ras-2_mapped_to_genome_single_summary_type.tsv
490 B
ras-2_mapped_to_genome_single_summary_gene.tsv
2.76 MB
ras-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
Paraclu
ras-2_mapped_to_genome_single_peaks.bed.gz
1.01 MB
Cutadapt (single-end)
ras-2_trimmed.fastq.gz
1.96 GB
STAR
ras-2_trimmed_unmapped.out.mate1.fastq.gz
1.63 GB
ras-2_trimmed.bam
2.63 GB
ras-2_trimmed.bam.bai
22.70 kB
ras-2_trimmed_stats.txt
1.79 kB
ras-2_trimmed_SJ.out.tab
0 B
iCount xlsites
ras-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
727.03 kB
ras-2_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-2_premapped_to_ncRNAs_single.bed.gz
272.92 kB
ras-2_premapped_to_ncRNAs_single.bedgraph
158 B
ras-2_premapped_to_ncRNAs_reads_single.bed.gz
288.74 kB
STAR
ras-2_mapped_to_genome.bam
2.31 GB
ras-2_mapped_to_genome.bam.bai
3.00 MB
ras-2_mapped_to_genome_SJ.out.tab
6.11 MB
ras-2_mapped_to_genome_stats.txt
1.82 kB
ras-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
332.11 MB
iCount xlsites
ras-2_mapped_to_genome_singleAndMulti.bed.gz
87.60 MB
ras-2_mapped_to_genome_single.bed.gz
42.76 MB
ras-2_mapped_to_genome_skipped.bam
29.08 kB
ras-2_mapped_to_genome_single.bedgraph
203.69 MB
ras-2_mapped_to_genome_reads_single.bed.gz
47.54 MB
iCount RNA-maps
ras-2_mapped_to_genome_single.tar.gz
4.57 MB
PEKA
ras-2_mapped_to_genome
Directory
ras-2_mapped_to_genome.tar.gz
601.67 kB
iCount peaks
ras-2_mapped_to_genome_single_peaks.bed.gz
6.71 MB
ras-2_mapped_to_genome_single_scores.tsv.gz
91.35 MB
ras-2_mapped_to_genome_single_peaks.bedgraph
25.57 MB
Ras_2_noUV
FASTQ file (single-end)
ras-2-nouv.fastq.gz
85.84 MB
ras-2-nouv_fastqc.zip
495.87 kB
Cutadapt (single-end)
ras-2-nouv_trimmed.fastq.gz
80.07 MB
iCLIP reads proxy
ras-2-nouv_mapped_to_genome.fastq.gz
41.13 MB
iCount RNA-maps
ras-2-nouv_mapped_to_genome_single.tar.gz
592.29 kB
Paraclu
ras-2-nouv_mapped_to_genome_single_peaks.bed.gz
2.44 kB
PEKA
ras-2-nouv_mapped_to_genome
Directory
ras-2-nouv_mapped_to_genome.tar.gz
297.92 kB
STAR
ras-2-nouv_trimmed_stats.txt
1.79 kB
ras-2-nouv_trimmed.bam.bai
22.60 kB
ras-2-nouv_trimmed.bam
153.89 MB
ras-2-nouv_trimmed_SJ.out.tab
0 B
ras-2-nouv_trimmed_unmapped.out.mate1.fastq.gz
41.13 MB
iCount xlsites
ras-2-nouv_premapped_to_ncRNAs_single.bed.gz
77.24 kB
ras-2-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
ras-2-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
197.56 kB
ras-2-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
ras-2-nouv_premapped_to_ncRNAs_reads_single.bed.gz
82.28 kB
STAR
ras-2-nouv_mapped_to_genome.bam
58.89 MB
ras-2-nouv_mapped_to_genome_stats.txt
1.81 kB
ras-2-nouv_mapped_to_genome.bam.bai
2.91 MB
ras-2-nouv_mapped_to_genome.bw
6.46 kB
ras-2-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
29.47 MB
ras-2-nouv_mapped_to_genome_SJ.out.tab
123.98 kB
iCount xlsites
ras-2-nouv_mapped_to_genome_single.bed.gz
442.60 kB
ras-2-nouv_mapped_to_genome_singleAndMulti.bed.gz
1.20 MB
ras-2-nouv_mapped_to_genome_reads_single.bed.gz
498.50 kB
ras-2-nouv_mapped_to_genome_skipped.bam
1.57 kB
ras-2-nouv_mapped_to_genome_single.bedgraph
1.77 MB
iCount summary
ras-2-nouv_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
ras-2-nouv_mapped_to_genome_single_summary_type.tsv
464 B
ras-2-nouv_mapped_to_genome_single_summary_gene.tsv
840.17 kB
iCount peaks
ras-2-nouv_mapped_to_genome_single_peaks.bed.gz
43.05 kB
ras-2-nouv_mapped_to_genome_single_scores.tsv.gz
1.03 MB
ras-2-nouv_mapped_to_genome_single_peaks.bedgraph
54.98 kB
Ras_3_noUV
FASTQ file (single-end)
ras-3-nouv.fastq.gz
38.74 MB
ras-3-nouv_fastqc.zip
506.10 kB
Cutadapt (single-end)
ras-3-nouv_trimmed.fastq.gz
36.51 MB
iCLIP reads proxy
ras-3-nouv_mapped_to_genome.fastq.gz
22.29 MB
Paraclu
ras-3-nouv_mapped_to_genome_single_peaks.bed.gz
1.43 kB
STAR
ras-3-nouv_trimmed_unmapped.out.mate1.fastq.gz
22.29 MB
ras-3-nouv_trimmed.bam
56.47 MB
ras-3-nouv_trimmed_stats.txt
1.79 kB
ras-3-nouv_trimmed.bam.bai
22.62 kB
ras-3-nouv_trimmed_SJ.out.tab
0 B
ras-3-nouv_trimmed.bw
277.05 kB
iCount xlsites
ras-3-nouv_premapped_to_ncRNAs_reads_single.bed.gz
65.56 kB
ras-3-nouv_premapped_to_ncRNAs_single.bed.gz
61.39 kB
ras-3-nouv_premapped_to_ncRNAs_singleAndMulti.bed.gz
153.06 kB
ras-3-nouv_premapped_to_ncRNAs_single.bedgraph
168 B
ras-3-nouv_premapped_to_ncRNAs_skipped.bam
4.29 kB
STAR
ras-3-nouv_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.42 MB
ras-3-nouv_mapped_to_genome.bam.bai
2.53 MB
ras-3-nouv_mapped_to_genome.bam
33.59 MB
ras-3-nouv_mapped_to_genome_SJ.out.tab
79.19 kB
ras-3-nouv_mapped_to_genome_stats.txt
1.80 kB
ras-3-nouv_mapped_to_genome.bw
6.03 kB
iCount xlsites
ras-3-nouv_mapped_to_genome_single.bedgraph
1.04 MB
ras-3-nouv_mapped_to_genome_skipped.bam
1.55 kB
ras-3-nouv_mapped_to_genome_singleAndMulti.bed.gz
791.89 kB
ras-3-nouv_mapped_to_genome_reads_single.bed.gz
301.04 kB
ras-3-nouv_mapped_to_genome_single.bed.gz
268.50 kB
iCount RNA-maps
ras-3-nouv_mapped_to_genome_single.tar.gz
527.42 kB
iCount summary
ras-3-nouv_mapped_to_genome_single_summary_subtype.tsv
1008 B
ras-3-nouv_mapped_to_genome_single_summary_type.tsv
460 B
ras-3-nouv_mapped_to_genome_single_summary_gene.tsv
660.29 kB
PEKA
ras-3-nouv_mapped_to_genome
Directory
ras-3-nouv_mapped_to_genome.tar.gz
275.78 kB
iCount peaks
ras-3-nouv_mapped_to_genome_single_peaks.bed.gz
25.83 kB
ras-3-nouv_mapped_to_genome_single_scores.tsv.gz
658.72 kB
ras-3-nouv_mapped_to_genome_single_peaks.bedgraph
31.52 kB