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Folder iconmiha_par_clip_test

Miha Milek
Feb. 25, 2020

No Sample

Cutadapt (single-end)
fastqc
Directory
uniq.PUM2_SRR048968_trimmed.fastq.gz
20.23 MB
report.txt
656 B
Paraclu
uniq.PUM2_SRR048968_trimmed_single_peaks.bed.gz
991 B
Paraclu
hdlbp2.RTstops_peaks.bed.gz
464.69 kB
Import sites (BED6 format)
IGF2BP1_SRR048950.RTstops.bed.gz
3.86 MB
K-mers
hdlbp2.RTstops.tar.gz
11.31 MB
hdlbp2.RTstops
0 B
Paraclu
IGF2BP1_SRR048951_genomeTC_peaks.bed.gz
68.99 kB
K-mers
IGF2BP1_SRR048950.RTstops
0 B
IGF2BP1_SRR048950.RTstops.tar.gz
7.97 MB
Paraclu
IGF2BP1_SRR048950.RTstops_peaks.bed.gz
23.31 kB
K-mers
IGF2BP1_SRR048951.RTstops
0 B
IGF2BP1_SRR048951.RTstops.tar.gz
9.18 MB
Paraclu
hdlbp3_genomeTC_peaks.bed.gz
172.72 kB
FASTQ file (single-end)
uniq.IGF2BP1_SRR048950.fastq.gz
15.70 MB
fastqc
Directory
stderr.txt
1.09 kB
uniq.IGF2BP1_SRR048950_fastqc.zip
341.25 kB
FASTQ file (single-end)
fastqc
Directory
uniq.IGF2BP1_SRR048951.fastq.gz
21.40 MB
stderr.txt
1.09 kB
uniq.IGF2BP1_SRR048951_fastqc.zip
289.24 kB
FASTQ file (single-end)
uniq.PUM2_SRR048968.fastq.gz
30.52 MB
fastqc
Directory
stderr.txt
1.03 kB
uniq.PUM2_SRR048968_fastqc.zip
369.52 kB
iCount RNA-maps
uniq.PUM2_SRR048968_trimmed_single.tar.gz
557.24 kB
Import sites (BED6 format)
PUM2_SRR048968_genomeTC.bed.gz
563.59 kB
Paraclu
PUM2_SRR048968_genomeTC_peaks.bed.gz
8.20 kB
STAR
uniq.PUM2_SRR048968_trimmed_unmapped.out.mate1.fastq.gz
8.92 MB
uniq.PUM2_SRR048968_trimmed.bam.bai
3.93 MB
uniq.PUM2_SRR048968_trimmed_stats.txt
1.80 kB
uniq.PUM2_SRR048968_trimmed_SJ.out.tab
205.50 kB
uniq.PUM2_SRR048968_trimmed.bw
7.07 MB
uniq.PUM2_SRR048968_trimmed.bam
55.80 MB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
1.68 MB
iCount xlsites
uniq.PUM2_SRR048968_trimmed_singleAndMulti.bed.gz
6.31 MB
uniq.PUM2_SRR048968_trimmed_single.bed.gz
1.19 MB
uniq.PUM2_SRR048968_trimmed_skipped.bam
3.63 kB
uniq.PUM2_SRR048968_trimmed_reads_single.bed.gz
1.23 MB
uniq.PUM2_SRR048968_trimmed_single.bedgraph
4.83 MB
iCount summary
uniq.PUM2_SRR048968_trimmed_single_summary_type.tsv
427 B
uniq.PUM2_SRR048968_trimmed_single_summary_subtype.tsv
1.03 kB
uniq.PUM2_SRR048968_trimmed_single_summary_gene.tsv
1.42 MB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
4.55 MB
K-mers
uniq.PUM2_SRR048968.tar.gz
134 B
Import sites (BED6 format)
hdlbp2_genomeTC.bed.gz
6.27 MB
Import sites (BED6 format)
hdlbp3_genomeTC.bed.gz
4.27 MB
Paraclu
hdlbp2_genomeTC_peaks.bed.gz
261.99 kB
K-mers
hdlbp3_genomeTC
Directory
hdlbp3_genomeTC.tar.gz
9.59 MB
K-mers
hdlbp2_genomeTC.tar.gz
10.23 MB
hdlbp2_genomeTC
Directory
Import sites (BED6 format)
PUM2_SRR048968.RTstops.bed.gz
2.00 MB
Paraclu
PUM2_SRR048968.RTstops_peaks.bed.gz
28.62 kB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
4.55 MB
Import sites (BED6 format)
IGF2BP1_SRR048951_genomeTC.bed.gz
2.97 MB
K-mers
hdlbp2_genomeTC
Directory
hdlbp2_genomeTC.tar.gz
10.24 MB
K-mers
PUM2_SRR048968.RTstops
0 B
PUM2_SRR048968.RTstops.tar.gz
6.70 MB
Import sites (BED6 format)
hdlbp2.RTstops.bed.gz
13.44 MB
Import sites (BED6 format)
IGF2BP1_SRR048951.RTstops.bed.gz
3.50 MB
Import sites (BED6 format)
IGF2BP1_SRR048950_genomeTC.bed.gz
1.89 MB
K-mers
hdlbp3_genomeTC
Directory
hdlbp3_genomeTC.tar.gz
9.60 MB
K-mers
hdlbp2_genomeTC
Directory
hdlbp2_genomeTC.tar.gz
10.23 MB
Paraclu
IGF2BP1_SRR048950_genomeTC_peaks.bed.gz
16.41 kB
Paraclu
IGF2BP1_SRR048951.RTstops_peaks.bed.gz
78.80 kB
K-mers
IGF2BP1_SRR048950_genomeTC
Directory
IGF2BP1_SRR048950_genomeTC.tar.gz
6.97 MB
K-mers
IGF2BP1_SRR048951_genomeTC
Directory
IGF2BP1_SRR048951_genomeTC.tar.gz
8.61 MB

uniq.IGF2BP1_SRR048950.fastq.gz

FASTQ file (single-end)
uniq.IGF2BP1_SRR048950.fastq.gz
15.70 MB
fastqc
Directory
stderr.txt
1.09 kB
uniq.IGF2BP1_SRR048950_fastqc.zip
341.25 kB

uniq.IGF2BP1_SRR048951.fastq.gz

FASTQ file (single-end)
fastqc
Directory
uniq.IGF2BP1_SRR048951.fastq.gz
21.40 MB
stderr.txt
1.09 kB
uniq.IGF2BP1_SRR048951_fastqc.zip
289.24 kB

Sites (hdlbp2.RTstops.bed)

Paraclu
hdlbp2.RTstops_peaks.bed.gz
464.69 kB
K-mers
hdlbp2.RTstops.tar.gz
11.31 MB
hdlbp2.RTstops
0 B
Import sites (BED6 format)
hdlbp2.RTstops.bed.gz
13.44 MB

Sites (PUM2_SRR048968.RTstops.bed)

Import sites (BED6 format)
PUM2_SRR048968.RTstops.bed.gz
2.00 MB
Paraclu
PUM2_SRR048968.RTstops_peaks.bed.gz
28.62 kB
K-mers
PUM2_SRR048968.RTstops
0 B
PUM2_SRR048968.RTstops.tar.gz
6.70 MB

Sites (hdlbp2_genomeTC.bed)

Import sites (BED6 format)
hdlbp2_genomeTC.bed.gz
6.27 MB
Paraclu
hdlbp2_genomeTC_peaks.bed.gz
261.99 kB
K-mers
hdlbp2_genomeTC.tar.gz
10.23 MB
hdlbp2_genomeTC
Directory
K-mers
hdlbp2_genomeTC
Directory
hdlbp2_genomeTC.tar.gz
10.23 MB

Sites (hdlbp3_genomeTC.bed)

Paraclu
hdlbp3_genomeTC_peaks.bed.gz
172.72 kB
Import sites (BED6 format)
hdlbp3_genomeTC.bed.gz
4.27 MB
K-mers
hdlbp3_genomeTC
Directory
hdlbp3_genomeTC.tar.gz
9.60 MB

Sites (IGF2BP1_SRR048950.RTstops.bed)

Import sites (BED6 format)
IGF2BP1_SRR048950.RTstops.bed.gz
3.86 MB
K-mers
IGF2BP1_SRR048950.RTstops
0 B
IGF2BP1_SRR048950.RTstops.tar.gz
7.97 MB
Paraclu
IGF2BP1_SRR048950.RTstops_peaks.bed.gz
23.31 kB

Sites (IGF2BP1_SRR048951.RTstops.bed)

K-mers
IGF2BP1_SRR048951.RTstops
0 B
IGF2BP1_SRR048951.RTstops.tar.gz
9.18 MB
Import sites (BED6 format)
IGF2BP1_SRR048951.RTstops.bed.gz
3.50 MB
Paraclu
IGF2BP1_SRR048951.RTstops_peaks.bed.gz
78.80 kB

Sites (IGF2BP1_SRR048950_genomeTC.bed)

Import sites (BED6 format)
IGF2BP1_SRR048950_genomeTC.bed.gz
1.89 MB
Paraclu
IGF2BP1_SRR048950_genomeTC_peaks.bed.gz
16.41 kB
K-mers
IGF2BP1_SRR048950_genomeTC
Directory
IGF2BP1_SRR048950_genomeTC.tar.gz
6.97 MB

Sites (IGF2BP1_SRR048951_genomeTC.bed)

Paraclu
IGF2BP1_SRR048951_genomeTC_peaks.bed.gz
68.99 kB
Import sites (BED6 format)
IGF2BP1_SRR048951_genomeTC.bed.gz
2.97 MB
K-mers
IGF2BP1_SRR048951_genomeTC
Directory
IGF2BP1_SRR048951_genomeTC.tar.gz
8.61 MB

Sites (PUM2_SRR048968_genomeTC.bed)

Import sites (BED6 format)
PUM2_SRR048968_genomeTC.bed.gz
563.59 kB
Paraclu
PUM2_SRR048968_genomeTC_peaks.bed.gz
8.20 kB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
1.68 MB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
4.55 MB
K-mers
PUM2_SRR048968_genomeTC
Directory
PUM2_SRR048968_genomeTC.tar.gz
4.55 MB

uniq.PUM2_SRR048968.fastq.gz

Paraclu
uniq.PUM2_SRR048968_trimmed_single_peaks.bed.gz
991 B
FASTQ file (single-end)
uniq.PUM2_SRR048968.fastq.gz
30.52 MB
fastqc
Directory
stderr.txt
1.03 kB
uniq.PUM2_SRR048968_fastqc.zip
369.52 kB
iCount RNA-maps
uniq.PUM2_SRR048968_trimmed_single.tar.gz
557.24 kB
Cutadapt (single-end)
uniq.PUM2_SRR048968_trimmed.fastq.gz
20.23 MB
fastqc
Directory
report.txt
656 B
STAR
uniq.PUM2_SRR048968_trimmed_unmapped.out.mate1.fastq.gz
8.92 MB
uniq.PUM2_SRR048968_trimmed.bam.bai
3.93 MB
uniq.PUM2_SRR048968_trimmed_stats.txt
1.80 kB
uniq.PUM2_SRR048968_trimmed_SJ.out.tab
205.50 kB
uniq.PUM2_SRR048968_trimmed.bw
7.07 MB
uniq.PUM2_SRR048968_trimmed.bam
55.80 MB
iCount xlsites
uniq.PUM2_SRR048968_trimmed_singleAndMulti.bed.gz
6.31 MB
uniq.PUM2_SRR048968_trimmed_single.bed.gz
1.19 MB
uniq.PUM2_SRR048968_trimmed_skipped.bam
3.63 kB
uniq.PUM2_SRR048968_trimmed_reads_single.bed.gz
1.23 MB
uniq.PUM2_SRR048968_trimmed_single.bedgraph
4.83 MB
iCount summary
uniq.PUM2_SRR048968_trimmed_single_summary_type.tsv
427 B
uniq.PUM2_SRR048968_trimmed_single_summary_subtype.tsv
1.03 kB
uniq.PUM2_SRR048968_trimmed_single_summary_gene.tsv
1.42 MB
K-mers
uniq.PUM2_SRR048968.tar.gz
134 B