FASTQ file (single-end)
demux_nomatch.fastq.gz
2.43 GB
demux_nomatch_fastqc.zip
491.52 kB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed.fastq.gz
1.07 GB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed.fastq.gz
920.62 MB
FASTQ file (single-end)
TTP_iCLIP_20140723_L2_fastqc.zip
454.88 kB
TTP_iCLIP_20140723_L2.fastq.gz
4.64 GB
Paraclu
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single_peaks.bed.gz
3.29 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single.tar.gz
470.43 kB
FASTQ file (single-end)
demux_nomatch.fastq.gz
314.73 MB
demux_nomatch_fastqc.zip
424.39 kB
Upload iCount sample annotation
TTP_20140723_BISL2_annotation_sheet.tab.gz
950 B
TTP_20140723_BISL2_annotation_sheet.xlsx
14.89 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1.fastq.gz
659.60 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_fastqc.zip
342.29 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.tar.gz
492.10 kB
Paraclu
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single_peaks.bed.gz
9.90 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_fastqc.zip
342.79 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2.fastq.gz
729.42 MB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1.fastq.gz
1009.57 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_fastqc.zip
352.54 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2.fastq.gz
660.50 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_fastqc.zip
361.07 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
443 B
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1.fastq.gz
1.24 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_fastqc.zip
358.08 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2.fastq.gz
846.59 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_fastqc.zip
365.55 kB
FASTQ file (single-end)
demux_nomatch_fastqc.zip
483.30 kB
demux_nomatch.fastq.gz
2.10 GB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single_peaks.bed.gz
6.82 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1.fastq.gz
972.08 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_fastqc.zip
358.98 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1.fastq.gz
1.13 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_fastqc.zip
364.73 kB
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_type.tsv
439 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_gene.tsv
886.18 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_subtype.tsv
1012 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
453 B
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1.fastq.gz
752.60 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_fastqc.zip
362.99 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_fastqc.zip
332.52 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2.fastq.gz
1.30 GB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_peaks.bed.gz
30.28 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single_peaks.bed.gz
7.15 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2.tar.gz
324.13 kB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed.fastq.gz
1.34 GB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2.fastq.gz
1.32 GB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_fastqc.zip
346.41 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1.fastq.gz
1008.69 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_fastqc.zip
341.59 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_fastqc.zip
347.61 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1.fastq.gz
961.72 MB
Upload iCount sample annotation
TTP_20140723_BGIL1_annotation_sheet.xlsx
15.04 kB
TTP_20140723_BGIL1_annotation_sheet.tab.gz
959 B
FASTQ file (single-end)
TTP_20140723_BGIL2_fastqc.zip
474.27 kB
TTP_20140723_BGIL2.fastq.gz
6.60 GB
FASTQ file (single-end)
TTP_iCLIP_20140723_BISL1_fastqc.zip
447.25 kB
TTP_iCLIP_20140723_BISL1.fastq.gz
3.26 GB
Upload iCount sample annotation
TTP_20140723_BISL1_annotation_sheet.xlsx
14.92 kB
TTP_20140723_BISL1_annotation_sheet.tab.gz
948 B
FASTQ file (single-end)
TTP_iCLIP_20140723_L1_fastqc.zip
454.26 kB
TTP_iCLIP_20140723_L1.fastq.gz
4.99 GB
Upload iCount sample annotation
TTP_20140723_BGIL2_annotation_sheet.xlsx
14.92 kB
TTP_20140723_BGIL2_annotation_sheet.tab.gz
928 B
Upload iCount sample annotation
TTP_20140723_L1_annotation_sheet.xlsx
14.91 kB
TTP_20140723_L1_annotation_sheet.tab.gz
939 B
Upload iCount sample annotation
TTP_20140723_L2_annotation_sheet.xlsx
14.92 kB
TTP_20140723_L2_annotation_sheet.tab.gz
945 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
447 B
FASTQ file (single-end)
TTP_20140723_BGIL1_fastqc.zip
472.81 kB
TTP_20140723_BGIL1.fastq.gz
6.73 GB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
368 B
FASTQ file (single-end)
TTP_iCLIP_20140723_BISL2_fastqc.zip
446.31 kB
TTP_iCLIP_20140723_BISL2.fastq.gz
3.63 GB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
447 B
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1.fastq.gz
621.57 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_fastqc.zip
347.12 kB
FASTQ file (single-end)
demux_nomatch_fastqc.zip
439.91 kB
demux_nomatch.fastq.gz
359.81 MB
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single_summary_type.tsv
440 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single_summary_subtype.tsv
1017 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single_summary_gene.tsv
822.35 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_type.tsv
439 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_gene.tsv
679.68 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_summary_subtype.tsv
1016 B
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1.fastq.gz
694.54 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_fastqc.zip
352.63 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single_summary_type.tsv
440 B
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single_summary_gene.tsv
906.37 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single_summary_subtype.tsv
1018 B
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single.tar.gz
533.81 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1.tar.gz
334.67 kB
iCount summary
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single_summary_subtype.tsv
1020 B
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single_summary_type.tsv
441 B
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single_summary_gene.tsv
1014.84 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single.tar.gz
598.12 kB
K-mers
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2.tar.gz
355.92 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1.fastq.gz
909.38 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_fastqc.zip
375.56 kB
iCount summary
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single_summary_type.tsv
435 B
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single_summary_gene.tsv
617.92 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single_summary_subtype.tsv
1009 B
Paraclu
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single_peaks.bed.gz
3.88 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single.tar.gz
468.68 kB
K-mers
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1.tar.gz
301.92 kB
iCount summary
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single_summary_type.tsv
438 B
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single_summary_subtype.tsv
1017 B
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single_summary_gene.tsv
658.72 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single.tar.gz
458.41 kB
K-mers
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2.tar.gz
208.40 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_fastqc.zip
357.02 kB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1.fastq.gz
1.05 GB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_fastqc.zip
334.13 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1.fastq.gz
951.38 MB
iCount summary
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single_summary_type.tsv
437 B
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single_summary_subtype.tsv
1014 B
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single_summary_gene.tsv
802.54 kB
Paraclu
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single_peaks.bed.gz
5.10 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single.tar.gz
467.03 kB
K-mers
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1.tar.gz
299.39 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single.tar.gz
498.23 kB
Paraclu
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single_peaks.bed.gz
5.03 kB
K-mers
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1.tar.gz
301.48 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1.fastq.gz
1.06 GB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_fastqc.zip
365.66 kB
iCount summary
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single_summary_subtype.tsv
1011 B
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single_summary_type.tsv
436 B
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single_summary_gene.tsv
840.09 kB
iCount summary
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single_summary_subtype.tsv
1013 B
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single_summary_gene.tsv
964.68 kB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single_summary_type.tsv
440 B
Paraclu
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single_peaks.bed.gz
5.33 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single.tar.gz
543.09 kB
K-mers
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1.tar.gz
317.96 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single_peaks.bed.gz
4.98 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2.tar.gz
334.56 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single.tar.gz
572.97 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single_summary_type.tsv
442 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single_summary_gene.tsv
681.27 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single_summary_subtype.tsv
1018 B
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single_peaks.bed.gz
4.81 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single.tar.gz
481.88 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1.tar.gz
312.55 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.tar.gz
818.86 kB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2.tar.gz
395.68 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2.fastq.gz
624.62 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_fastqc.zip
352.60 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_peaks.bed.gz
5.17 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.tar.gz
521.84 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2.tar.gz
327.20 kB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed.fastq.gz
676.80 MB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed.fastq.gz
637.87 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed.fastq.gz
707.22 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed.fastq.gz
774.93 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed.fastq.gz
930.20 MB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed.fastq.gz
1.30 GB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed.fastq.gz
958.66 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed.fastq.gz
989.48 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed.fastq.gz
1.07 GB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed.fastq.gz
680.04 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed.fastq.gz
1.01 GB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed.fastq.gz
744.34 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed.fastq.gz
640.07 MB
FASTQ file (single-end)
demux_nomatch.fastq.gz
480.54 MB
demux_nomatch_fastqc.zip
434.96 kB
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2.fastq.gz
788.59 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_fastqc.zip
357.61 kB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_unmapped.out.mate1.fastq.gz
115.23 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed.bam
798.74 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed.bam.bai
2.72 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_SJ.out.tab
85.54 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_stats.txt
1.82 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_unmapped.out.mate1.fastq.gz
143.84 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed.bam.bai
2.53 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_SJ.out.tab
59.09 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed.bam
972.96 MB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed.bam.bai
2.87 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed.bam
821.42 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_unmapped.out.mate1.fastq.gz
122.07 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_SJ.out.tab
91.11 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_unmapped.out.mate1.fastq.gz
128.81 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed.bam.bai
2.96 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_SJ.out.tab
99.61 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_stats.txt
1.81 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed.bam
893.60 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
437 B
FASTQ file (single-end)
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1.fastq.gz
1.04 GB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_fastqc.zip
348.25 kB
STAR
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed.bam.bai
3.10 MB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_unmapped.out.mate1.fastq.gz
235.94 MB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed.bam
1.74 GB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_SJ.out.tab
163.77 kB
STAR
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_stats.txt
1.81 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_unmapped.out.mate1.fastq.gz
232.46 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed.bam
1.40 GB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed.bam.bai
2.37 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_SJ.out.tab
55.45 kB
STAR
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_unmapped.out.mate1.fastq.gz
280.96 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed.bam.bai
2.91 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed.bam
1.27 GB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_SJ.out.tab
113.74 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_stats.txt
1.82 kB
STAR
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_unmapped.out.mate1.fastq.gz
199.85 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed.bam.bai
2.86 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed.bam
1.45 GB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_SJ.out.tab
93.23 kB
STAR
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed.bam.bai
2.69 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_unmapped.out.mate1.fastq.gz
438.91 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed.bam
1.84 GB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_SJ.out.tab
78.09 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_unmapped.out.mate1.fastq.gz
131.71 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed.bam.bai
2.56 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed.bam
924.58 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_SJ.out.tab
104.50 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_stats.txt
1.82 kB
STAR
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed.bam.bai
3.16 MB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_unmapped.out.mate1.fastq.gz
159.79 MB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_stats.txt
1.81 kB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed.bam
1.34 GB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_SJ.out.tab
116.45 kB
STAR
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_unmapped.out.mate1.fastq.gz
245.26 MB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed.bam.bai
3.13 MB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_SJ.out.tab
123.75 kB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed.bam
1.37 GB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_unmapped.out.mate1.fastq.gz
202.12 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed.bam
1.28 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed.bam.bai
2.59 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_SJ.out.tab
69.55 kB
FASTQ file (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_fastqc.zip
342.49 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2.fastq.gz
906.85 MB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_unmapped.out.mate1.fastq.gz
118.42 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed.bam.bai
3.71 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed.bam
1010.95 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_SJ.out.tab
236.20 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed.bam.bai
2.90 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed.bam
903.37 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_SJ.out.tab
90.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_unmapped.out.mate1.fastq.gz
139.75 MB
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_gene.tsv
1.34 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_type.tsv
446 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_subtype.tsv
1.00 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single.tar.gz
827.28 kB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single_peaks.bed.gz
35.97 kB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2.tar.gz
414.88 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single_peaks.bed.gz
7.92 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1.tar.gz
324.59 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single.tar.gz
533.27 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_subtype.tsv
1015 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_type.tsv
437 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single_summary_gene.tsv
986.67 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single.tar.gz
578.88 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single_peaks.bed.gz
6.66 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2.tar.gz
329.48 kB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_peaks.bed.gz
6.43 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.tar.gz
542.76 kB
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_skipped.bam
1.73 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single.bed.gz
418.38 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_reads_single.bed.gz
498.99 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_singleAndMulti.bed.gz
1.22 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single.bedgraph
1.60 MB
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_singleAndMulti.bed.gz
1.37 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_reads_single.bed.gz
549.59 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_skipped.bam
1.63 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.bedgraph
1.78 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.bed.gz
464.83 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1_trimmed_single.tar.gz
531.22 kB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_skipped.bam
1.58 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.bed.gz
269.59 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_reads_single.bed.gz
308.98 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_singleAndMulti.bed.gz
901.68 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single.bedgraph
1013.40 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1_trimmed_single_peaks.bed.gz
4.32 kB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single.tar.gz
555.31 kB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single_peaks.bed.gz
13.73 kB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1.tar.gz
344.08 kB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed.fastq.gz
1.01 GB
iCount RNA-maps
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single.tar.gz
567.47 kB
Paraclu
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single_peaks.bed.gz
12.79 kB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1.tar.gz
340.95 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1.tar.gz
321.17 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single_peaks.bed.gz
8.00 kB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single.tar.gz
503.54 kB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed.fastq.gz
1.15 GB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single_summary_subtype.tsv
1014 B
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single_summary_gene.tsv
1.03 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single_summary_type.tsv
442 B
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single.tar.gz
553.70 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single_peaks.bed.gz
17.87 kB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1.tar.gz
343.83 kB
FASTQ file (single-end)
demux_nomatch.fastq.gz
514.27 MB
demux_nomatch_fastqc.zip
441.51 kB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single.bed.gz
482.63 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_singleAndMulti.bed.gz
1.54 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_reads_single.bed.gz
552.61 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single.bedgraph
1.81 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_skipped.bam
13.91 kB
Paraclu
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-bisl1_trimmed_single_peaks.bed.gz
7.88 kB
iCount xlsites
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_reads_single.bed.gz
257.57 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single.bed.gz
221.45 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_single.bedgraph
842.44 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_skipped.bam
1.56 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-20140723-bgil2-1_trimmed_singleAndMulti.bed.gz
787.78 kB
iCount xlsites
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_skipped.bam
2.28 kB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single.bed.gz
637.34 kB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_singleAndMulti.bed.gz
2.04 MB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_reads_single.bed.gz
786.17 kB
zfp36-bmdm-ttpaagfp-dox6h-20140723-bgil2_trimmed_single.bedgraph
2.53 MB
iCount xlsites
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_skipped.bam
68.11 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_singleAndMulti.bed.gz
1.55 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single.bed.gz
380.92 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_reads_single.bed.gz
431.42 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-ko-20140723-bgil1-1_trimmed_single.bedgraph
1.42 MB
iCount xlsites
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_skipped.bam
1.78 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_singleAndMulti.bed.gz
1.30 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single.bed.gz
357.93 kB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single.bedgraph
1.33 MB
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_reads_single.bed.gz
405.32 kB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single.bed.gz
532.48 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_skipped.bam
1.38 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_singleAndMulti.bed.gz
1.19 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_reads_single.bed.gz
661.58 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single.bedgraph
2.11 MB
iCount xlsites
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_singleAndMulti.bed.gz
1.09 MB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_reads_single.bed.gz
293.39 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single.bedgraph
1011.99 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single.bed.gz
262.84 kB
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_skipped.bam
1.79 kB
iCount xlsites
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single.bedgraph
1.87 MB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_skipped.bam
2.34 kB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_singleAndMulti.bed.gz
1.77 MB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_reads_single.bed.gz
576.63 kB
zfp36-bmdm-ttpgfp-dox6h-ko-20140723-bgil1_trimmed_single.bed.gz
497.77 kB
iCount xlsites
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single.bed.gz
407.31 kB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_skipped.bam
2.71 kB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_reads_single.bed.gz
455.70 kB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_single.bedgraph
1.51 MB
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1_trimmed_singleAndMulti.bed.gz
1.73 MB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_skipped.bam
1.97 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_reads_single.bed.gz
338.62 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single.bed.gz
287.88 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_singleAndMulti.bed.gz
981.71 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-1_trimmed_single.bedgraph
1.06 MB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_skipped.bam
3.95 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.bed.gz
441.10 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_reads_single.bed.gz
530.89 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.bedgraph
1.68 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_singleAndMulti.bed.gz
1.30 MB
Paraclu
zfp36-bmdm-ttpaagfp-dox6hlps4h-20140723-bgil2_trimmed_single_peaks.bed.gz
2.76 kB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed.fastq.gz
803.59 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed.fastq.gz
867.52 MB
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed.fastq.gz
1.27 GB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1-1.tar.gz
324.34 kB
Cutadapt (single-end)
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed.fastq.gz
982.34 MB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single_summary_type.tsv
439 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single_summary_gene.tsv
859.55 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2-2_trimmed_single_summary_subtype.tsv
1015 B
Cutadapt (single-end)
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed.fastq.gz
1.05 GB
iCount summary
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single_summary_type.tsv
440 B
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single_summary_subtype.tsv
1018 B
zfp36-bmdm-ttpgfp-dox6hlps4h-ko-20140723-bgil1_trimmed_single_summary_gene.tsv
808.92 kB
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_skipped.bam
5.25 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_singleAndMulti.bed.gz
3.99 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.bed.gz
1.66 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_reads_single.bed.gz
2.05 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single.bedgraph
7.26 MB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_subtype.tsv
1014 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_gene.tsv
849.49 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_type.tsv
439 B
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_SJ.out.tab
129.40 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_unmapped.out.mate1.fastq.gz
176.84 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed.bam
1.13 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed.bam.bai
3.33 MB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed.bam.bai
3.82 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed.bam
1.24 GB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_SJ.out.tab
280.71 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_unmapped.out.mate1.fastq.gz
152.34 MB
K-mers
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl1.tar.gz
323.57 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_unmapped.out.mate1.fastq.gz
254.67 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed.bam
1.64 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed.bam.bai
3.08 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_SJ.out.tab
110.41 kB
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_subtype.tsv
1.00 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_type.tsv
441 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-bisl2_trimmed_single_summary_gene.tsv
1.22 MB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_unmapped.out.mate1.fastq.gz
168.32 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed.bam.bai
2.92 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_SJ.out.tab
124.91 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed.bam
1.17 GB
K-mers
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-bisl1.tar.gz
311.57 kB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_unmapped.out.mate1.fastq.gz
175.90 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_SJ.out.tab
117.75 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed.bam.bai
3.10 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed.bam
1.23 GB
STAR
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_unmapped.out.mate1.fastq.gz
189.72 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed.bam
1.27 GB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_SJ.out.tab
132.88 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed.bam.bai
3.19 MB
STAR
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed.bam
1.50 GB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_unmapped.out.mate1.fastq.gz
219.81 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_SJ.out.tab
79.49 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed.bam.bai
2.92 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_stats.txt
1.82 kB
K-mers
zfp36-bmdm-ttpaagfp-dox6h-ko-20140723-bgil1-1.tar.gz
302.80 kB
STAR
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_unmapped.out.mate1.fastq.gz
194.16 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed.bam.bai
3.23 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_stats.txt
1.82 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_SJ.out.tab
168.23 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed.bam
1.38 GB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single.bed.gz
575.97 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_skipped.bam
1.85 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_reads_single.bed.gz
664.78 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_singleAndMulti.bed.gz
1.97 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2_trimmed_single.bedgraph
2.17 MB
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_skipped.bam
2.53 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single.bed.gz
1.85 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_reads_single.bed.gz
2.24 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_singleAndMulti.bed.gz
5.05 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l2_trimmed_single.bedgraph
7.96 MB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_skipped.bam
63.59 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single.bedgraph
1.53 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_singleAndMulti.bed.gz
1.55 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_reads_single.bed.gz
470.54 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single.bed.gz
416.89 kB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_skipped.bam
1.81 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_singleAndMulti.bed.gz
1.60 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_reads_single.bed.gz
745.22 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single.bed.gz
617.64 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single.bedgraph
2.39 MB
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single.bed.gz
530.78 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_skipped.bam
2.18 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_singleAndMulti.bed.gz
1.73 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_reads_single.bed.gz
609.76 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single.bedgraph
1.98 MB
iCount RNA-maps
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single.tar.gz
499.87 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single_summary_type.tsv
439 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single_summary_gene.tsv
953.88 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-2_trimmed_single_summary_subtype.tsv
1020 B
iCount xlsites
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single.bed.gz
601.52 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_skipped.bam
3.80 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_reads_single.bed.gz
686.81 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single.bedgraph
2.25 MB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_singleAndMulti.bed.gz
1.95 MB
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single_summary_type.tsv
440 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single_summary_gene.tsv
932.78 kB
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1-1_trimmed_single_summary_subtype.tsv
1016 B
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single_summary_subtype.tsv
1019 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single_summary_gene.tsv
839.23 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l2-1_trimmed_single_summary_type.tsv
442 B
iCount summary
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_subtype.tsv
1017 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_type.tsv
437 B
zfp36-bmdm-ttpaagfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_gene.tsv
1014.08 kB
iCount summary
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_type.tsv
440 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_subtype.tsv
1019 B
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single_summary_gene.tsv
776.54 kB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_skipped.bam
87.57 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_singleAndMulti.bed.gz
2.32 MB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_reads_single.bed.gz
736.87 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single.bed.gz
662.19 kB
zfp36-bmdm-ttpgfp-ko-dox6h-20140723-l1_trimmed_single.bedgraph
2.47 MB
iCount xlsites
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_skipped.bam
2.08 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single.bedgraph
1.28 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_singleAndMulti.bed.gz
1.28 MB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_reads_single.bed.gz
392.35 kB
zfp36-bmdm-ttpgfp-ko-dox6hlps1h-20140723-l1_trimmed_single.bed.gz
351.78 kB
TTP/ZFP36: a regulator of inflammation
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