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CELF4 regulates mRNAs and genes associated with regulation of synaptic function
RNA-binding proteins have emerged as causal agents of complex neurological diseases. Mice deficient for neuronal RNA-binding protein CELF4 have a complex neurological disorder with epilepsy as a prominent feature. Human CELF4 has recently been associated with clinical features similar to those seen in mutant mice. CELF4 is expressed primarily in excitatory neurons, including large pyramidal cells of the cerebral cortex and hippocampus, and it regulates excitatory but not inhibitory neurotransmission. We examined mechanisms underlying neuronal hyperexcitability in Celf4 mutants by identifying CELF4 target mRNAs and assessing their fate in the absence of CELF4 in view of their known functions. CELF4 binds to at least 15%-20% of the transcriptome, with striking specificity for the mRNA 3' untranslated region. CELF4 mRNA targets encode a variety of proteins, many of which are well established in neuron development and function. While the overall abundance of these mRNA targets is often dysregulated in Celf4 deficient mice, the actual expression changes are modest at the steady-state level. In contrast, by examining the transcriptome of polysome fractions and the mRNA distribution along the neuronal cell body-neuropil axis, we found that CELF4 is critical for maintaining mRNA stability and availability for translation. Among biological processes associated with CELF4 targets that accumulate in neuropil of mutants, regulation of synaptic plasticity and transmission are the most prominent. Together with a related study of the impact of CELF4 loss on sodium channel Na(v)1.6 function, we suggest that CELF4 deficiency leads to abnormal neuronal function by combining a specific effect on neuronal excitation with a general impairment of synaptic transmission. These results also expand our understanding of the vital roles RNA-binding proteins play in regulating and shaping the activity of neural circuits.
20110427_LUmb42_CELF4_sequence.fastq.gz
FASTQ file (single-end)
20110427_LUmb42_CELF4_sequence_fastqc.zip
507.39 kB
20110427_LUmb42_CELF4_sequence.fastq.gz
713.05 MB
20110427_LUmb41_CELF4_sequence.fastq.gz
FASTQ file (single-end)
20110427_LUmb41_CELF4_sequence_fastqc.zip
498.71 kB
20110427_LUmb41_CELF4_sequence.fastq.gz
762.59 MB
demux_nomatch.fastq.gz
FASTQ file (single-end)
demux_nomatch.fastq.gz
20.38 MB
demux_nomatch_fastqc.zip
495.17 kB
demux_nomatch.fastq.gz
FASTQ file (single-end)
demux_nomatch.fastq.gz
17.06 MB
demux_nomatch_fastqc.zip
493.08 kB
CELF4_brain:adult_KO_female_mutant_20110427_LUmb41
iCount summary
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_gene.tsv
1.58 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_subtype.tsv
1019 B
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_type.tsv
439 B
Paraclu
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_peaks.bed.gz
44.80 kB
iCount RNA-maps
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.tar.gz
1.49 MB
K-mers
celf4-brain-adult-ko-female-mutant-20110427-lumb41
Directory
celf4-brain-adult-ko-female-mutant-20110427-lumb41.tar.gz
416.68 kB
FASTQ file (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb41.fastq.gz
116.91 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_fastqc.zip
351.32 kB
Cutadapt (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.fastq.gz
117.52 MB
STAR
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bam.bai
3.55 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
13.38 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_SJ.out.tab
584.78 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bam
177.34 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bw
25.73 kB
iCount xlsites
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.bed.gz
8.98 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_singleAndMulti.bed.gz
12.20 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.bedgraph
41.77 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_skipped.bam
2.49 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_reads_single.bed.gz
9.55 MB
CELF4_brain:adult_WT_female_wildtype_20110427_LUmb41
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb41
Directory
celf4-brain-adult-wt-female-wildtype-20110427-lumb41.tar.gz
503.27 kB
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb41.fastq.gz
191.98 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_fastqc.zip
347.40 kB
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.tar.gz
1.66 MB
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_peaks.bed.gz
201.87 kB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.fastq.gz
192.64 MB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bam
266.73 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bam.bai
3.53 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bw
26.37 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
15.03 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_SJ.out.tab
551.38 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_stats.txt
1.80 kB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_skipped.bam
1.98 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_singleAndMulti.bed.gz
17.69 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.bedgraph
63.81 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_reads_single.bed.gz
14.07 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.bed.gz
13.46 MB
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_gene.tsv
1.60 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_type.tsv
439 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_subtype.tsv
1.00 kB
CELF4_brain:adult_KO_female_mutant_20110427_LUmb42
FASTQ file (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb42.fastq.gz
40.01 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_fastqc.zip
353.86 kB
iCount RNA-maps
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.tar.gz
837.38 kB
K-mers
celf4-brain-adult-ko-female-mutant-20110427-lumb42
Directory
celf4-brain-adult-ko-female-mutant-20110427-lumb42.tar.gz
334.78 kB
Cutadapt (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.fastq.gz
39.43 MB
Paraclu
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_peaks.bed.gz
5.65 kB
STAR
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bam.bai
3.31 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
4.52 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_SJ.out.tab
150.89 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bam
57.90 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bw
12.19 kB
iCount xlsites
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_skipped.bam
1.69 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.bed.gz
2.61 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_reads_single.bed.gz
2.83 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.bedgraph
11.65 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_singleAndMulti.bed.gz
3.63 MB
iCount summary
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_type.tsv
426 B
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_gene.tsv
1.24 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_subtype.tsv
1001 B
CELF4_brain:adult_WT_female_wildtype_20110427_LUmb42_1
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1
Directory
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1.tar.gz
448.70 kB
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_fastqc.zip
342.87 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1.fastq.gz
123.81 MB
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_peaks.bed.gz
130.85 kB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.fastq.gz
124.83 MB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_unmapped.out.mate1.fastq.gz
9.07 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bam
174.90 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_stats.txt
1.80 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bam.bai
3.61 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bw
19.52 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_SJ.out.tab
341.74 kB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_skipped.bam
2.02 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_reads_single.bed.gz
8.54 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.bed.gz
8.04 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_singleAndMulti.bed.gz
11.20 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.bedgraph
37.86 MB
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_type.tsv
435 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_gene.tsv
1.48 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_subtype.tsv
1021 B
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.tar.gz
1.29 MB
CELF4_brain:adult_WT_male_wildtype_20110427_LUmb42
Cutadapt (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.fastq.gz
165.50 MB
Paraclu
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_peaks.bed.gz
236.02 kB
K-mers
celf4-brain-adult-wt-male-wildtype-20110427-lumb42
Directory
celf4-brain-adult-wt-male-wildtype-20110427-lumb42.tar.gz
506.44 kB
FASTQ file (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb42.fastq.gz
163.71 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_fastqc.zip
337.29 kB
iCount summary
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_type.tsv
442 B
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_gene.tsv
1.72 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.tar.gz
1.69 MB
STAR
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
13.43 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_stats.txt
1.81 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bam.bai
3.42 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_SJ.out.tab
580.15 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bw
27.84 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bam
260.68 MB
iCount xlsites
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_skipped.bam
2.72 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.bed.gz
13.49 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.bedgraph
63.82 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_singleAndMulti.bed.gz
20.45 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_reads_single.bed.gz
13.84 MB
CELF4_brain:adult_KO_male_mutant_20110427_LUmb42
K-mers
celf4-brain-adult-ko-male-mutant-20110427-lumb42.tar.gz
360.03 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42
Directory
FASTQ file (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb42.fastq.gz
57.16 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_fastqc.zip
349.95 kB
Paraclu
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_peaks.bed.gz
11.38 kB
iCount RNA-maps
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.tar.gz
1015.70 kB
Cutadapt (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.fastq.gz
57.60 MB
STAR
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
5.93 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bw
15.81 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_SJ.out.tab
252.82 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bam.bai
3.38 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bam
82.74 MB
iCount xlsites
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_singleAndMulti.bed.gz
5.13 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_reads_single.bed.gz
4.14 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.bed.gz
3.83 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.bedgraph
17.40 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_skipped.bam
1.73 kB
iCount summary
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_subtype.tsv
1003 B
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_gene.tsv
1.35 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_type.tsv
431 B
No Sample
iCount RNA-maps
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.tar.gz
837.38 kB
FASTQ file (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb41.fastq.gz
54.65 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_fastqc.zip
356.93 kB
Upload iCount sample annotation
20110427_LUmb42_annotation_sheet.tab.gz
982 B
20110427_LUmb42_annotation_sheet.xlsx
15.09 kB
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1
Directory
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1.tar.gz
448.70 kB
FASTQ file (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb41.fastq.gz
223.97 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_fastqc.zip
341.78 kB
Cutadapt (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.fastq.gz
165.50 MB
FASTQ file (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb42.fastq.gz
40.01 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_fastqc.zip
353.86 kB
Paraclu
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_peaks.bed.gz
236.02 kB
Cutadapt (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.fastq.gz
226.46 MB
iCount RNA-maps
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.tar.gz
1.01 MB
iCount summary
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_gene.tsv
1.58 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_subtype.tsv
1019 B
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_summary_type.tsv
439 B
Paraclu
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single_peaks.bed.gz
44.80 kB
iCount RNA-maps
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.tar.gz
1.49 MB
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42.fastq.gz
152.38 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_fastqc.zip
337.12 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
456 B
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb41
Directory
celf4-brain-adult-wt-female-wildtype-20110427-lumb41.tar.gz
503.27 kB
K-mers
celf4-brain-adult-wt-male-wildtype-20110427-lumb41
Directory
celf4-brain-adult-wt-male-wildtype-20110427-lumb41.tar.gz
529.83 kB
K-mers
celf4-brain-adult-ko-male-mutant-20110427-lumb41
Directory
celf4-brain-adult-ko-male-mutant-20110427-lumb41.tar.gz
364.80 kB
K-mers
celf4-brain-adult-ko-female-mutant-20110427-lumb41
Directory
celf4-brain-adult-ko-female-mutant-20110427-lumb41.tar.gz
416.68 kB
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb42.tar.gz
493.48 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42
Directory
K-mers
celf4-brain-adult-ko-male-mutant-20110427-lumb42.tar.gz
360.03 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42
Directory
K-mers
celf4-brain-adult-wt-male-wildtype-20110427-lumb42
Directory
celf4-brain-adult-wt-male-wildtype-20110427-lumb42.tar.gz
506.44 kB
K-mers
celf4-brain-adult-ko-female-mutant-20110427-lumb42
Directory
celf4-brain-adult-ko-female-mutant-20110427-lumb42.tar.gz
334.78 kB
Upload iCount sample annotation
20110427_LUmb41_annotation_sheet.xlsx
14.96 kB
20110427_LUmb41_annotation_sheet.tab.gz
961 B
FASTQ file (single-end)
20110427_LUmb41_CELF4_sequence_fastqc.zip
498.71 kB
20110427_LUmb41_CELF4_sequence.fastq.gz
762.59 MB
FASTQ file (single-end)
20110427_LUmb42_CELF4_sequence_fastqc.zip
507.39 kB
20110427_LUmb42_CELF4_sequence.fastq.gz
713.05 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
535 B
FASTQ file (single-end)
demux_nomatch.fastq.gz
20.38 MB
demux_nomatch_fastqc.zip
495.17 kB
FASTQ file (single-end)
demux_nomatch.fastq.gz
17.06 MB
demux_nomatch_fastqc.zip
493.08 kB
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_fastqc.zip
342.87 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1.fastq.gz
123.81 MB
FASTQ file (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb42.fastq.gz
163.71 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_fastqc.zip
337.29 kB
FASTQ file (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb41.fastq.gz
116.91 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_fastqc.zip
351.32 kB
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb41.fastq.gz
191.98 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_fastqc.zip
347.40 kB
Paraclu
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_peaks.bed.gz
310.03 kB
iCount RNA-maps
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.tar.gz
1.89 MB
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.tar.gz
1.66 MB
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_peaks.bed.gz
201.87 kB
Paraclu
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_peaks.bed.gz
12.76 kB
Cutadapt (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.fastq.gz
55.12 MB
FASTQ file (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb42.fastq.gz
57.16 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_fastqc.zip
349.95 kB
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_peaks.bed.gz
130.85 kB
iCount summary
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_type.tsv
442 B
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_gene.tsv
1.72 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.tar.gz
1.69 MB
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_peaks.bed.gz
194.29 kB
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.tar.gz
1.57 MB
Paraclu
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_peaks.bed.gz
11.38 kB
iCount RNA-maps
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.tar.gz
1015.70 kB
Cutadapt (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.fastq.gz
39.43 MB
Paraclu
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_peaks.bed.gz
5.65 kB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.fastq.gz
192.64 MB
Cutadapt (single-end)
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.fastq.gz
117.52 MB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.fastq.gz
124.83 MB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.fastq.gz
154.00 MB
Cutadapt (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.fastq.gz
57.60 MB
STAR
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bam.bai
3.45 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_stats.txt
1.81 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bw
28.73 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bam
327.90 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
14.10 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_SJ.out.tab
696.97 kB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bam
266.73 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bam.bai
3.53 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed.bw
26.37 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
15.03 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_SJ.out.tab
551.38 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_stats.txt
1.80 kB
STAR
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bam
82.14 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bam.bai
3.38 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_SJ.out.tab
310.43 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
5.81 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bw
16.40 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_stats.txt
1.80 kB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_unmapped.out.mate1.fastq.gz
9.07 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bam
174.90 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_stats.txt
1.80 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bam.bai
3.61 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed.bw
19.52 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_SJ.out.tab
341.74 kB
STAR
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bam.bai
3.55 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
13.38 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_SJ.out.tab
584.78 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bam
177.34 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed.bw
25.73 kB
STAR
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
13.43 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_stats.txt
1.81 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bam.bai
3.42 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_SJ.out.tab
580.15 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bw
27.84 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed.bam
260.68 MB
STAR
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bam.bai
3.31 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
4.52 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_SJ.out.tab
150.89 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bam
57.90 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed.bw
12.19 kB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
10.64 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bam.bai
3.55 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bam
218.50 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bw
24.07 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_SJ.out.tab
450.98 kB
STAR
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
5.93 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bw
15.81 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_SJ.out.tab
252.82 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bam.bai
3.38 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed.bam
82.74 MB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_skipped.bam
1.98 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_singleAndMulti.bed.gz
17.69 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.bedgraph
63.81 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_reads_single.bed.gz
14.07 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single.bed.gz
13.46 MB
iCount xlsites
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_skipped.bam
2.63 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.bed.gz
17.17 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_singleAndMulti.bed.gz
23.14 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.bedgraph
81.62 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_reads_single.bed.gz
17.65 MB
iCount xlsites
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_skipped.bam
1.88 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.bedgraph
17.93 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.bed.gz
3.94 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_singleAndMulti.bed.gz
5.29 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_reads_single.bed.gz
4.22 MB
iCount xlsites
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.bed.gz
8.98 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_singleAndMulti.bed.gz
12.20 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_single.bedgraph
41.77 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_skipped.bam
2.49 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb41_trimmed_reads_single.bed.gz
9.55 MB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_skipped.bam
2.02 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_reads_single.bed.gz
8.54 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.bed.gz
8.04 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_singleAndMulti.bed.gz
11.20 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.bedgraph
37.86 MB
iCount xlsites
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_skipped.bam
2.72 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.bed.gz
13.49 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_single.bedgraph
63.82 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_singleAndMulti.bed.gz
20.45 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb42_trimmed_reads_single.bed.gz
13.84 MB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_skipped.bam
2.03 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.bed.gz
11.83 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_singleAndMulti.bed.gz
15.57 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_reads_single.bed.gz
12.23 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.bedgraph
56.18 MB
iCount xlsites
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_singleAndMulti.bed.gz
5.13 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_reads_single.bed.gz
4.14 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.bed.gz
3.83 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single.bedgraph
17.40 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_skipped.bam
1.73 kB
iCount xlsites
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_skipped.bam
1.69 kB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.bed.gz
2.61 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_reads_single.bed.gz
2.83 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single.bedgraph
11.65 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_singleAndMulti.bed.gz
3.63 MB
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_gene.tsv
1.60 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_type.tsv
439 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb41_trimmed_single_summary_subtype.tsv
1.00 kB
iCount summary
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_gene.tsv
1.70 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_subtype.tsv
1.01 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_type.tsv
446 B
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_type.tsv
435 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_gene.tsv
1.48 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single_summary_subtype.tsv
1021 B
iCount summary
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_type.tsv
426 B
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_gene.tsv
1.24 MB
celf4-brain-adult-ko-female-mutant-20110427-lumb42_trimmed_single_summary_subtype.tsv
1001 B
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb42-1_trimmed_single.tar.gz
1.29 MB
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_gene.tsv
1.57 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_type.tsv
442 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_subtype.tsv
1.00 kB
iCount summary
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_gene.tsv
1.35 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_subtype.tsv
1001 B
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_type.tsv
428 B
iCount summary
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_subtype.tsv
1003 B
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_gene.tsv
1.35 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb42_trimmed_single_summary_type.tsv
431 B
CELF4_brain:adult_KO_male_mutant_20110427_LUmb41
iCount RNA-maps
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.tar.gz
1.01 MB
FASTQ file (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb41.fastq.gz
54.65 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_fastqc.zip
356.93 kB
K-mers
celf4-brain-adult-ko-male-mutant-20110427-lumb41
Directory
celf4-brain-adult-ko-male-mutant-20110427-lumb41.tar.gz
364.80 kB
Paraclu
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_peaks.bed.gz
12.76 kB
Cutadapt (single-end)
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.fastq.gz
55.12 MB
STAR
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bam
82.14 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bam.bai
3.38 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_SJ.out.tab
310.43 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
5.81 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed.bw
16.40 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_stats.txt
1.80 kB
iCount xlsites
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_skipped.bam
1.88 kB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.bedgraph
17.93 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single.bed.gz
3.94 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_singleAndMulti.bed.gz
5.29 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_reads_single.bed.gz
4.22 MB
iCount summary
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_gene.tsv
1.35 MB
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_subtype.tsv
1001 B
celf4-brain-adult-ko-male-mutant-20110427-lumb41_trimmed_single_summary_type.tsv
428 B
CELF4_brain:adult_WT_male_wildtype_20110427_LUmb41
FASTQ file (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb41.fastq.gz
223.97 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_fastqc.zip
341.78 kB
Cutadapt (single-end)
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.fastq.gz
226.46 MB
K-mers
celf4-brain-adult-wt-male-wildtype-20110427-lumb41
Directory
celf4-brain-adult-wt-male-wildtype-20110427-lumb41.tar.gz
529.83 kB
Paraclu
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_peaks.bed.gz
310.03 kB
iCount RNA-maps
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.tar.gz
1.89 MB
STAR
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bam.bai
3.45 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_stats.txt
1.81 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bw
28.73 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed.bam
327.90 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_unmapped.out.mate1.fastq.gz
14.10 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_SJ.out.tab
696.97 kB
iCount xlsites
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_skipped.bam
2.63 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.bed.gz
17.17 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_singleAndMulti.bed.gz
23.14 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single.bedgraph
81.62 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_reads_single.bed.gz
17.65 MB
iCount summary
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_gene.tsv
1.70 MB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_subtype.tsv
1.01 kB
celf4-brain-adult-wt-male-wildtype-20110427-lumb41_trimmed_single_summary_type.tsv
446 B
CELF4_brain:adult_WT_female_wildtype_20110427_LUmb42
FASTQ file (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42.fastq.gz
152.38 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_fastqc.zip
337.12 kB
K-mers
celf4-brain-adult-wt-female-wildtype-20110427-lumb42.tar.gz
493.48 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42
Directory
Paraclu
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_peaks.bed.gz
194.29 kB
iCount RNA-maps
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.tar.gz
1.57 MB
Cutadapt (single-end)
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.fastq.gz
154.00 MB
STAR
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_unmapped.out.mate1.fastq.gz
10.64 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_stats.txt
1.80 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bam.bai
3.55 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bam
218.50 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed.bw
24.07 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_SJ.out.tab
450.98 kB
iCount xlsites
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_skipped.bam
2.03 kB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.bed.gz
11.83 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_singleAndMulti.bed.gz
15.57 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_reads_single.bed.gz
12.23 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single.bedgraph
56.18 MB
iCount summary
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_gene.tsv
1.57 MB
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_type.tsv
442 B
celf4-brain-adult-wt-female-wildtype-20110427-lumb42_trimmed_single_summary_subtype.tsv
1.00 kB