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Folder iconhnRNPA2 condensation properties

Rahul Arora
Jan. 15, 2020

HNRNPA2B1_HEK293_nuc_20140613_LUg3738_1

FASTQ file (single-end)
hnrnpa2b1-hek293-nuc-20140613-lug3738-1.fastq.gz
35.16 MB
fastqc
Directory
stderr.txt
1.42 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_fastqc.zip
438.55 kB
K-mers
hnrnpa2b1-hek293-nuc-20140613-lug3738-1.tar.gz
124.47 kB
iCount summary
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_subtype.tsv
720 B
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_type.tsv
420 B
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_gene.tsv
96.02 kB
iCount RNA-maps
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.tar.gz
263.59 kB
Paraclu
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_peaks.bed.gz
165 B
Cutadapt (single-end)
report.txt
674 B
fastqc
Directory
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.fastq.gz
35.81 MB
STAR
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bam.bai
1.62 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_unmapped.out.mate1.fastq.gz
2.23 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_SJ.out.tab
5.22 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bam
31.11 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_stats.txt
1.79 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bw
17.13 kB
iCount xlsites
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_singleAndMulti.bed.gz
83.84 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.bedgraph
65.13 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_skipped.bam
2.90 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_reads_single.bed.gz
23.22 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.bed.gz
20.52 kB

HNRNPA2B1_HEK293_cyt_20140613_LUg3738

STAR
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_unmapped.out.mate1.fastq.gz
18.97 MB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_stats.txt
1.81 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.bam.bai
2.69 MB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_SJ.out.tab
61.52 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.bam
787.79 MB
FASTQ file (single-end)
fastqc
Directory
hnrnpa2b1-hek293-cyt-20140613-lug3738_fastqc.zip
434.21 kB
stderr.txt
1.38 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738.fastq.gz
347.97 MB
iCount summary
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_type.tsv
434 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_subtype.tsv
1003 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_gene.tsv
769.21 kB
Paraclu
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_peaks.bed.gz
1.15 kB
iCount RNA-maps
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.tar.gz
463.92 kB
K-mers
hnrnpa2b1-hek293-cyt-20140613-lug3738.tar.gz
310.21 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
673 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.fastq.gz
354.45 MB
iCount xlsites
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_skipped.bam
3.09 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.bed.gz
238.66 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_reads_single.bed.gz
279.47 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_singleAndMulti.bed.gz
763.67 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.bedgraph
860.58 kB

hnRNPA2_20140613_LUg3738.fastq.gz

FASTQ file (single-end)
fastqc
Directory
hnRNPA2_20140613_LUg3738.fastq.gz
4.56 GB
stderr.txt
1.13 kB
hnRNPA2_20140613_LUg3738_fastqc.zip
451.69 kB

demux_nomatch.fastq.gz

FASTQ file (single-end)
demux_nomatch.fastq.gz
3.79 GB
fastqc
Directory
stderr.txt
935 B
demux_nomatch_fastqc.zip
460.05 kB

HNRNPA2B1_HEK293_nuc_20140613_LUg3738

STAR
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bam
123.25 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_unmapped.out.mate1.fastq.gz
10.65 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_stats.txt
1.80 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bam.bai
2.73 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bw
24.72 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_SJ.out.tab
34.72 kB
FASTQ file (single-end)
fastqc
Directory
hnrnpa2b1-hek293-nuc-20140613-lug3738.fastq.gz
121.24 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_fastqc.zip
388.76 kB
stderr.txt
1.38 kB
Paraclu
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_peaks.bed.gz
649 B
iCount RNA-maps
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.tar.gz
452.59 kB
K-mers
hnrnpa2b1-hek293-nuc-20140613-lug3738.tar.gz
296.74 kB
Cutadapt (single-end)
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.fastq.gz
123.69 MB
fastqc
Directory
report.txt
673 B
iCount xlsites
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_skipped.bam
2.90 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.bed.gz
329.11 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_reads_single.bed.gz
394.55 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_singleAndMulti.bed.gz
791.09 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.bedgraph
1.21 MB
iCount summary
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_type.tsv
428 B
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_gene.tsv
774.51 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_subtype.tsv
933 B

No Sample

FASTQ file (single-end)
hnrnpa2b1-hek293-nuc-20140613-lug3738-1.fastq.gz
35.16 MB
fastqc
Directory
stderr.txt
1.42 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_fastqc.zip
438.55 kB
FASTQ file (single-end)
fastqc
Directory
hnRNPA2_20140613_LUg3738.fastq.gz
4.56 GB
stderr.txt
1.13 kB
hnRNPA2_20140613_LUg3738_fastqc.zip
451.69 kB
STAR
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_unmapped.out.mate1.fastq.gz
18.97 MB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_stats.txt
1.81 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.bam.bai
2.69 MB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_SJ.out.tab
61.52 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.bam
787.79 MB
STAR
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bam
123.25 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_unmapped.out.mate1.fastq.gz
10.65 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_stats.txt
1.80 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bam.bai
2.73 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.bw
24.72 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_SJ.out.tab
34.72 kB
Upload iCount sample annotation
Annotation_20140613_LUg3738.xlsx
10.57 kB
Annotation_20140613_LUg3738.tab.gz
1.09 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
346 B
FASTQ file (single-end)
demux_nomatch.fastq.gz
3.79 GB
fastqc
Directory
stderr.txt
935 B
demux_nomatch_fastqc.zip
460.05 kB
FASTQ file (single-end)
fastqc
Directory
hnrnpa2b1-hek293-cyt-20140613-lug3738_fastqc.zip
434.21 kB
stderr.txt
1.38 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738.fastq.gz
347.97 MB
iCount summary
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_type.tsv
434 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_subtype.tsv
1003 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_summary_gene.tsv
769.21 kB
Paraclu
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single_peaks.bed.gz
1.15 kB
iCount RNA-maps
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.tar.gz
463.92 kB
K-mers
hnrnpa2b1-hek293-cyt-20140613-lug3738.tar.gz
310.21 kB
K-mers
hnrnpa2b1-hek293-nuc-20140613-lug3738-1.tar.gz
124.47 kB
iCount summary
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_subtype.tsv
720 B
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_type.tsv
420 B
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_summary_gene.tsv
96.02 kB
iCount RNA-maps
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.tar.gz
263.59 kB
Paraclu
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single_peaks.bed.gz
165 B
FASTQ file (single-end)
fastqc
Directory
hnrnpa2b1-hek293-nuc-20140613-lug3738.fastq.gz
121.24 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738_fastqc.zip
388.76 kB
stderr.txt
1.38 kB
Paraclu
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_peaks.bed.gz
649 B
iCount RNA-maps
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.tar.gz
452.59 kB
K-mers
hnrnpa2b1-hek293-nuc-20140613-lug3738.tar.gz
296.74 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
673 B
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed.fastq.gz
354.45 MB
Cutadapt (single-end)
report.txt
674 B
fastqc
Directory
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.fastq.gz
35.81 MB
Cutadapt (single-end)
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed.fastq.gz
123.69 MB
fastqc
Directory
report.txt
673 B
STAR
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bam.bai
1.62 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_unmapped.out.mate1.fastq.gz
2.23 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_SJ.out.tab
5.22 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bam
31.11 MB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_stats.txt
1.79 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed.bw
17.13 kB
iCount xlsites
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_singleAndMulti.bed.gz
83.84 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.bedgraph
65.13 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_skipped.bam
2.90 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_reads_single.bed.gz
23.22 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738-1_trimmed_single.bed.gz
20.52 kB
iCount xlsites
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_skipped.bam
2.90 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.bed.gz
329.11 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_reads_single.bed.gz
394.55 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_singleAndMulti.bed.gz
791.09 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single.bedgraph
1.21 MB
iCount xlsites
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_skipped.bam
3.09 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.bed.gz
238.66 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_reads_single.bed.gz
279.47 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_singleAndMulti.bed.gz
763.67 kB
hnrnpa2b1-hek293-cyt-20140613-lug3738_trimmed_single.bedgraph
860.58 kB
iCount summary
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_type.tsv
428 B
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_gene.tsv
774.51 kB
hnrnpa2b1-hek293-nuc-20140613-lug3738_trimmed_single_summary_subtype.tsv
933 B