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Folder iconK562_m1G_miCLIP

Patrick Toolan-Kerr
Nov. 19, 2019

Copy of m1G_K562__20180515_JU

iCount summary
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_subtype.tsv
645 B
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_type.tsv
268 B
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_gene.tsv
1.27 MB
Reads (single-end)
fastqc
Directory
stderr.txt
975 B
demux_NNNNCCTGCNNN.fastq.gz
744.63 MB
demux_NNNNCCTGCNNN_fastqc.zip
440.15 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
670 B
demux_NNNNCCTGCNNN_trimmed_fastqc.zip
439.78 kB
demux_NNNNCCTGCNNN_trimmed.fastq.gz
772.10 MB
iCount xlsites
demux_NNNNCCTGCNNN_trimmed_single.bed.gz
1.96 MB
demux_NNNNCCTGCNNN_trimmed_skipped.bam
35.25 kB
demux_NNNNCCTGCNNN_trimmed_single.bedgraph
7.85 MB
demux_NNNNCCTGCNNN_trimmed_singleAndMulti.bed.gz
8.12 MB
STAR
demux_NNNNCCTGCNNN_trimmed_unmapped.out.mate1.fastq.gz
555.75 MB
demux_NNNNCCTGCNNN_trimmed.bam.bai
4.05 MB
demux_NNNNCCTGCNNN_trimmed_stats.txt
1.81 kB
demux_NNNNCCTGCNNN_trimmed.bam
2.38 GB
demux_NNNNCCTGCNNN_trimmed_SJ.out.tab
940.61 kB

Copy of m1G_K562_Total RNA_20180518_PTK

iCount summary
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_type.tsv
269 B
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_subtype.tsv
643 B
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_gene.tsv
939.56 kB
STAR
demux_NNNNCATTTNNN_trimmed.bam
1.67 GB
demux_NNNNCATTTNNN_trimmed_unmapped.out.mate1.fastq.gz
171.83 MB
demux_NNNNCATTTNNN_trimmed_stats.txt
1.82 kB
demux_NNNNCATTTNNN_trimmed_SJ.out.tab
494.57 kB
demux_NNNNCATTTNNN_trimmed.bw
3.23 MB
demux_NNNNCATTTNNN_trimmed.bam.bai
4.21 MB
Reads (single-end)
fastqc
Directory
demux_NNNNCATTTNNN_fastqc.zip
534.25 kB
demux_NNNNCATTTNNN.fastq.gz
392.51 MB
stderr.txt
975 B
Cutadapt (single-end)
fastqc
Directory
demux_NNNNCATTTNNN_trimmed_fastqc.zip
499.57 kB
demux_NNNNCATTTNNN_trimmed.fastq.gz
380.31 MB
report.txt
687 B
iCount xlsites
demux_NNNNCATTTNNN_trimmed_single.bed.gz
952.36 kB
demux_NNNNCATTTNNN_trimmed_singleAndMulti.bed.gz
3.53 MB
demux_NNNNCATTTNNN_trimmed_single.bedgraph
3.78 MB
demux_NNNNCATTTNNN_trimmed_skipped.bam
5.50 kB

No Sample

iCount summary
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_subtype.tsv
645 B
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_type.tsv
268 B
demux_NNNNCCTGCNNN_trimmed_single_summary.tsv_summary_gene.tsv
1.27 MB
Reads (single-end)
fastqc
Directory
stderr.txt
975 B
demux_NNNNCCTGCNNN.fastq.gz
744.63 MB
demux_NNNNCCTGCNNN_fastqc.zip
440.15 kB
iCount summary
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_type.tsv
269 B
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_subtype.tsv
643 B
demux_NNNNCATTTNNN_trimmed_single_summary.tsv_summary_gene.tsv
939.56 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
670 B
demux_NNNNCCTGCNNN_trimmed_fastqc.zip
439.78 kB
demux_NNNNCCTGCNNN_trimmed.fastq.gz
772.10 MB
STAR
demux_NNNNCATTTNNN_trimmed.bam
1.67 GB
demux_NNNNCATTTNNN_trimmed_unmapped.out.mate1.fastq.gz
171.83 MB
demux_NNNNCATTTNNN_trimmed_stats.txt
1.82 kB
demux_NNNNCATTTNNN_trimmed_SJ.out.tab
494.57 kB
demux_NNNNCATTTNNN_trimmed.bw
3.23 MB
demux_NNNNCATTTNNN_trimmed.bam.bai
4.21 MB
Reads (single-end)
fastqc
Directory
demux_NNNNCATTTNNN_fastqc.zip
534.25 kB
demux_NNNNCATTTNNN.fastq.gz
392.51 MB
stderr.txt
975 B
iCount xlsites
demux_NNNNCCTGCNNN_trimmed_single.bed.gz
1.96 MB
demux_NNNNCCTGCNNN_trimmed_skipped.bam
35.25 kB
demux_NNNNCCTGCNNN_trimmed_single.bedgraph
7.85 MB
demux_NNNNCCTGCNNN_trimmed_singleAndMulti.bed.gz
8.12 MB
STAR
demux_NNNNCCTGCNNN_trimmed_unmapped.out.mate1.fastq.gz
555.75 MB
demux_NNNNCCTGCNNN_trimmed.bam.bai
4.05 MB
demux_NNNNCCTGCNNN_trimmed_stats.txt
1.81 kB
demux_NNNNCCTGCNNN_trimmed.bam
2.38 GB
demux_NNNNCCTGCNNN_trimmed_SJ.out.tab
940.61 kB
Cutadapt (single-end)
fastqc
Directory
demux_NNNNCATTTNNN_trimmed_fastqc.zip
499.57 kB
demux_NNNNCATTTNNN_trimmed.fastq.gz
380.31 MB
report.txt
687 B
iCount xlsites
demux_NNNNCATTTNNN_trimmed_single.bed.gz
952.36 kB
demux_NNNNCATTTNNN_trimmed_singleAndMulti.bed.gz
3.53 MB
demux_NNNNCATTTNNN_trimmed_single.bedgraph
3.78 MB
demux_NNNNCATTTNNN_trimmed_skipped.bam
5.50 kB