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Folder iconNanoCompore validation m6A miCLIP

Charlotte Capitanchik
Nov. 12, 2019
m6A miCLIP produced from MOLM13 cells in either WT or CRISPR-targetted Mettl3 genetic background. This collection also contains an input sample for each condition.

m6A_MOLM13_WT2_20180522_JU

FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt2-20180522-ju.fastq.gz
179.89 MB
stderr.txt
1.11 kB
m6a-molm13-wt2-20180522-ju_fastqc.zip
472.23 kB
STAR
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bam.bai
3.22 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
15.93 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bam
112.66 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bw
30.45 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_SJ.out.tab
490.59 kB
iCount reads proxy
m6a-molm13-wt2-20180522-jufastqgz_unmapped.fastq.gz
46.54 MB
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_fastqc.zip
447.49 kB
iCount xlsites
m6a-molm13-wt2-20180522-jufastqgz_unmapped_skipped.bam
3.49 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single.bed.gz
1.31 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
2.72 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single.bedgraph
5.72 MB
iCount summary
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_type.tsv
265 B
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_gene.tsv
871.64 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
643 B
Cutadapt (single-end)
fastqc
Directory
m6a-molm13-wt2-20180522-ju_trimmed_fastqc.zip
462.61 kB
m6a-molm13-wt2-20180522-ju_trimmed.fastq.gz
186.88 MB
report.txt
693 B
STAR
m6a-molm13-wt2-20180522-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt2-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
46.54 MB
m6a-molm13-wt2-20180522-ju_trimmed.bam
297.41 MB
m6a-molm13-wt2-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-wt2-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-wt2-20180522-ju_trimmed.bw
106.70 kB
iCount xlsites
m6a-molm13-wt2-20180522-ju_trimmed_single.bed.gz
75.86 kB
m6a-molm13-wt2-20180522-ju_trimmed_singleAndMulti.bed.gz
119.19 kB
m6a-molm13-wt2-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-wt2-20180522-ju_trimmed_single.bedgraph
187 B

m6A_MOLM13_WT1_20180522_JU

iCount reads proxy
fastqc
Directory
m6a-molm13-wt1-20180522-jufastqgz_unmapped.fastq.gz
44.55 MB
stderr.txt
1.48 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_fastqc.zip
418.75 kB
STAR
m6a-molm13-wt1-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
44.55 MB
m6a-molm13-wt1-20180522-ju_trimmed.bam
230.93 MB
m6a-molm13-wt1-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-wt1-20180522-ju_trimmed.bw
106.55 kB
m6a-molm13-wt1-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-wt1-20180522-ju_trimmed.bam.bai
20.56 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m6a-molm13-wt1-20180522-ju_trimmed_fastqc.zip
413.35 kB
m6a-molm13-wt1-20180522-ju_trimmed.fastq.gz
165.76 MB
iCount summary
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_type.tsv
268 B
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_gene.tsv
825.90 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
644 B
STAR
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bam.bai
3.03 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_SJ.out.tab
478.32 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bam
98.20 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bw
29.28 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
16.15 MB
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt1-20180522-ju_fastqc.zip
444.92 kB
stderr.txt
1.11 kB
m6a-molm13-wt1-20180522-ju.fastq.gz
168.81 MB
iCount xlsites
m6a-molm13-wt1-20180522-ju_trimmed_single.bed.gz
72.90 kB
m6a-molm13-wt1-20180522-ju_trimmed_singleAndMulti.bed.gz
111.55 kB
m6a-molm13-wt1-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-wt1-20180522-ju_trimmed_single.bedgraph
187 B
iCount xlsites
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single.bed.gz
1.14 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_skipped.bam
3.15 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
2.32 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single.bedgraph
5.01 MB

input_MOLM13_MT3 KO total RNA_20180921_JU

FASTQ file (single-end)
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-ju.fastq.gz
66.02 MB
input-molm13-mt3-ko-total-rna-20180921-ju_fastqc.zip
457.65 kB
stderr.txt
1.40 kB
iCount summary
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_type.tsv
263 B
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_subtype.tsv
630 B
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_gene.tsv
383.47 kB
iCount xlsites
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_skipped.bam
3.17 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single.bedgraph
597.19 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_singleAndMulti.bed.gz
400.59 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single.bed.gz
157.79 kB
STAR
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bam.bai
1.94 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bam
21.54 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_SJ.out.tab
76.55 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_stats.txt
1.80 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bw
20.65 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
8.31 MB
iCount reads proxy
stderr.txt
1.77 kB
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.fastq.gz
12.79 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_fastqc.zip
477.11 kB
STAR
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bam.bai
20.07 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bam
91.49 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_unmapped.out.mate1.fastq.gz
12.79 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_stats.txt
1.78 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_SJ.out.tab
0 B
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bw
106.02 kB
Cutadapt (single-end)
report.txt
708 B
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.fastq.gz
67.48 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_fastqc.zip
468.05 kB
iCount RNA-maps
results.tar.gz
471.54 kB
iCount xlsites
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_single.bed.gz
70.77 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_singleAndMulti.bed.gz
95.43 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_single.bedgraph
230 B
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_skipped.bam
3.97 kB

m6A_MOLM13_MT3 KO 1_20180522_JU

STAR
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bw
23.78 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bam.bai
2.50 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
5.51 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_stats.txt
1.80 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bam
33.05 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_SJ.out.tab
170.98 kB
iCount reads proxy
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.fastq.gz
14.94 MB
stderr.txt
1.58 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_fastqc.zip
441.19 kB
iCount xlsites
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single.bed.gz
454.57 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
1.05 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_skipped.bam
3.53 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single.bedgraph
1.85 MB
iCount summary
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_type.tsv
266 B
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
640 B
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_gene.tsv
638.67 kB
STAR
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bam.bai
20.14 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
14.94 MB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bam
75.31 MB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bw
106.17 kB
Cutadapt (single-end)
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.fastq.gz
53.29 MB
report.txt
699 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_fastqc.zip
422.46 kB
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-ju_fastqc.zip
462.67 kB
m6a-molm13-mt3-ko-1-20180522-ju.fastq.gz
54.79 MB
stderr.txt
1.21 kB
iCount xlsites
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_single.bedgraph
192 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_singleAndMulti.bed.gz
84.95 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_single.bed.gz
58.21 kB

m6A_MOLM13_MT3 KO 2_20180522_JU

STAR
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
12.70 MB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bam.bai
20.42 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bam
73.99 MB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bw
106.22 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_SJ.out.tab
0 B
FASTQ file (single-end)
m6a-molm13-mt3-ko-2-20180522-ju.fastq.gz
46.32 MB
fastqc
Directory
stderr.txt
1.21 kB
m6a-molm13-mt3-ko-2-20180522-ju_fastqc.zip
489.35 kB
iCount xlsites
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_singleAndMulti.bed.gz
84.40 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_single.bed.gz
55.81 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_single.bedgraph
192 B
iCount reads proxy
fastqc
Directory
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.fastq.gz
12.70 MB
stderr.txt
1.66 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_fastqc.zip
459.55 kB
iCount xlsites
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single.bed.gz
407.48 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single.bedgraph
1.62 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_skipped.bam
2.93 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
954.76 kB
STAR
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
4.08 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_stats.txt
1.80 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bam.bai
2.47 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bw
23.17 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bam
28.86 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_SJ.out.tab
134.04 kB
iCount summary
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_type.tsv
265 B
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_gene.tsv
609.63 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
638 B
Cutadapt (single-end)
report.txt
698 B
fastqc
Directory
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_fastqc.zip
466.10 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.fastq.gz
47.94 MB

m6a-molm13-wt1-20180515-ju.fastq.gz

Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
m6a-molm13-wt1-20180515-ju_trimmed.fastq.gz
369.20 MB
Paraclu
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_peaks.bed.gz
14.04 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_fastqc.zip
449.90 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.fastq.gz
100.23 MB
iCount xlsites
m6a-molm13-wt1-20180515-jufastqgz_unmapped_reads_single.bed.gz
1.33 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_skipped.bam
5.36 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_singleAndMulti.bed.gz
2.95 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.bed.gz
1.14 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.bedgraph
4.88 MB
K-mers
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.tar.gz
2.16 MB
iCount summary
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_subtype.tsv
1.09 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_type.tsv
476 B
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_gene.tsv
1.31 MB
STAR
m6a-molm13-wt1-20180515-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
27.31 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bam.bai
3.75 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_SJ.out.tab
388.34 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bam
218.79 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bw
32.67 kB
iCount xlsites
m6a-molm13-wt1-20180515-ju_trimmed_skipped.bam
3.96 kB
m6a-molm13-wt1-20180515-ju_trimmed_reads_single.bed.gz
79.22 kB
m6a-molm13-wt1-20180515-ju_trimmed_singleAndMulti.bed.gz
113.15 kB
m6a-molm13-wt1-20180515-ju_trimmed_single.bed.gz
71.65 kB
m6a-molm13-wt1-20180515-ju_trimmed_single.bedgraph
218 B
STAR
m6a-molm13-wt1-20180515-ju_trimmed_unmapped.out.mate1.fastq.gz
100.23 MB
m6a-molm13-wt1-20180515-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt1-20180515-ju_trimmed_stats.txt
1.79 kB
m6a-molm13-wt1-20180515-ju_trimmed.bam
571.76 MB
m6a-molm13-wt1-20180515-ju_trimmed_SJ.out.tab
0 B
FASTQ file (single-end)
m6a-molm13-wt1-20180515-ju.fastq.gz
355.76 MB
fastqc
Directory
m6a-molm13-wt1-20180515-ju_fastqc.zip
455.14 kB
stderr.txt
1.11 kB
iCount RNA-maps
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.tar.gz
750.66 kB

m6a-molm13-wt2-20180515-ju.fastq.gz

Cutadapt (single-end)
fastqc
Directory
m6a-molm13-wt2-20180515-ju_trimmed.fastq.gz
411.66 MB
report.txt
664 B
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.fastq.gz
107.18 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_fastqc.zip
449.69 kB
K-mers
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.tar.gz
2.40 MB
iCount summary
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_type.tsv
477 B
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_gene.tsv
1.27 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_subtype.tsv
1.09 kB
iCount xlsites
m6a-molm13-wt2-20180515-ju_trimmed_single.bed.gz
70.90 kB
m6a-molm13-wt2-20180515-ju_trimmed_singleAndMulti.bed.gz
110.78 kB
m6a-molm13-wt2-20180515-ju_trimmed_skipped.bam
3.96 kB
m6a-molm13-wt2-20180515-ju_trimmed_reads_single.bed.gz
78.45 kB
m6a-molm13-wt2-20180515-ju_trimmed_single.bedgraph
218 B
iCount RNA-maps
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.tar.gz
744.99 kB
Paraclu
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_peaks.bed.gz
15.36 kB
iCount xlsites
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.bed.gz
1.07 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_skipped.bam
4.25 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_singleAndMulti.bed.gz
2.64 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_reads_single.bed.gz
1.25 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.bedgraph
4.60 MB
STAR
m6a-molm13-wt2-20180515-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
29.08 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bam.bai
3.53 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_SJ.out.tab
402.17 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bam
237.37 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bw
31.73 kB
STAR
m6a-molm13-wt2-20180515-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt2-20180515-ju_trimmed.bam
636.22 MB
m6a-molm13-wt2-20180515-ju_trimmed_unmapped.out.mate1.fastq.gz
107.18 MB
m6a-molm13-wt2-20180515-ju_trimmed_stats.txt
1.79 kB
m6a-molm13-wt2-20180515-ju_trimmed_SJ.out.tab
0 B
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt2-20180515-ju.fastq.gz
396.42 MB
stderr.txt
1.11 kB
m6a-molm13-wt2-20180515-ju_fastqc.zip
465.11 kB

input_MOLM13_WT total RNA_20180921_JU

STAR
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_stats.txt
1.80 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bam.bai
2.26 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
32.95 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bam
70.29 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_SJ.out.tab
169.71 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bw
23.82 kB
Cutadapt (single-end)
report.txt
704 B
fastqc
Directory
input-molm13-wt-total-rna-20180921-ju_trimmed_fastqc.zip
454.66 kB
input-molm13-wt-total-rna-20180921-ju_trimmed.fastq.gz
217.37 MB
iCount xlsites
input-molm13-wt-total-rna-20180921-ju_trimmed_skipped.bam
3.97 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_single.bedgraph
222 B
input-molm13-wt-total-rna-20180921-ju_trimmed_single.bed.gz
88.40 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_singleAndMulti.bed.gz
128.52 kB
iCount xlsites
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_singleAndMulti.bed.gz
836.35 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_skipped.bam
3.52 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single.bed.gz
335.76 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single.bedgraph
1.31 MB
iCount RNA-maps
results.tar.gz
588.74 kB
iCount reads proxy
fastqc
Directory
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.fastq.gz
43.42 MB
stderr.txt
1.69 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_fastqc.zip
466.23 kB
iCount summary
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_type.tsv
265 B
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_subtype.tsv
636 B
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_gene.tsv
551.58 kB
FASTQ file (single-end)
input-molm13-wt-total-rna-20180921-ju_fastqc.zip
450.88 kB
fastqc
Directory
input-molm13-wt-total-rna-20180921-ju.fastq.gz
213.07 MB
stderr.txt
1.32 kB
STAR
input-molm13-wt-total-rna-20180921-ju_trimmed.bam
294.82 MB
input-molm13-wt-total-rna-20180921-ju_trimmed.bam.bai
20.56 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_stats.txt
1.78 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_SJ.out.tab
0 B
input-molm13-wt-total-rna-20180921-ju_trimmed_unmapped.out.mate1.fastq.gz
43.42 MB
input-molm13-wt-total-rna-20180921-ju_trimmed.bw
106.52 kB

No Sample

iCount reads proxy
fastqc
Directory
m6a-molm13-wt1-20180522-jufastqgz_unmapped.fastq.gz
44.55 MB
stderr.txt
1.48 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_fastqc.zip
418.75 kB
STAR
m6a-molm13-wt1-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
44.55 MB
m6a-molm13-wt1-20180522-ju_trimmed.bam
230.93 MB
m6a-molm13-wt1-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-wt1-20180522-ju_trimmed.bw
106.55 kB
m6a-molm13-wt1-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-wt1-20180522-ju_trimmed.bam.bai
20.56 kB
Cutadapt (single-end)
fastqc
Directory
m6a-molm13-wt2-20180515-ju_trimmed.fastq.gz
411.66 MB
report.txt
664 B
Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
m6a-molm13-wt1-20180515-ju_trimmed.fastq.gz
369.20 MB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.fastq.gz
107.18 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_fastqc.zip
449.69 kB
K-mers
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.tar.gz
2.40 MB
iCount summary
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_type.tsv
477 B
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_gene.tsv
1.27 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_summary_subtype.tsv
1.09 kB
iCount xlsites
m6a-molm13-wt2-20180515-ju_trimmed_single.bed.gz
70.90 kB
m6a-molm13-wt2-20180515-ju_trimmed_singleAndMulti.bed.gz
110.78 kB
m6a-molm13-wt2-20180515-ju_trimmed_skipped.bam
3.96 kB
m6a-molm13-wt2-20180515-ju_trimmed_reads_single.bed.gz
78.45 kB
m6a-molm13-wt2-20180515-ju_trimmed_single.bedgraph
218 B
Paraclu
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_peaks.bed.gz
14.04 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m6a-molm13-wt1-20180522-ju_trimmed_fastqc.zip
413.35 kB
m6a-molm13-wt1-20180522-ju_trimmed.fastq.gz
165.76 MB
iCount reads proxy
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.fastq.gz
14.94 MB
stderr.txt
1.58 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_fastqc.zip
441.19 kB
STAR
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_stats.txt
1.80 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bam.bai
2.26 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
32.95 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bam
70.29 MB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_SJ.out.tab
169.71 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.bw
23.82 kB
STAR
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
12.70 MB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bam.bai
20.42 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bam
73.99 MB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.bw
106.22 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_SJ.out.tab
0 B
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_fastqc.zip
449.90 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.fastq.gz
100.23 MB
iCount xlsites
m6a-molm13-wt1-20180515-jufastqgz_unmapped_reads_single.bed.gz
1.33 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_skipped.bam
5.36 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_singleAndMulti.bed.gz
2.95 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.bed.gz
1.14 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.bedgraph
4.88 MB
iCount RNA-maps
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.tar.gz
744.99 kB
K-mers
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.tar.gz
2.16 MB
iCount summary
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_subtype.tsv
1.09 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_type.tsv
476 B
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single_summary_gene.tsv
1.31 MB
STAR
m6a-molm13-wt1-20180515-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
27.31 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bam.bai
3.75 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped_SJ.out.tab
388.34 kB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bam
218.79 MB
m6a-molm13-wt1-20180515-jufastqgz_unmapped.bw
32.67 kB
iCount xlsites
m6a-molm13-wt1-20180515-ju_trimmed_skipped.bam
3.96 kB
m6a-molm13-wt1-20180515-ju_trimmed_reads_single.bed.gz
79.22 kB
m6a-molm13-wt1-20180515-ju_trimmed_singleAndMulti.bed.gz
113.15 kB
m6a-molm13-wt1-20180515-ju_trimmed_single.bed.gz
71.65 kB
m6a-molm13-wt1-20180515-ju_trimmed_single.bedgraph
218 B
STAR
m6a-molm13-wt1-20180515-ju_trimmed_unmapped.out.mate1.fastq.gz
100.23 MB
m6a-molm13-wt1-20180515-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt1-20180515-ju_trimmed_stats.txt
1.79 kB
m6a-molm13-wt1-20180515-ju_trimmed.bam
571.76 MB
m6a-molm13-wt1-20180515-ju_trimmed_SJ.out.tab
0 B
Paraclu
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single_peaks.bed.gz
15.36 kB
iCount xlsites
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.bed.gz
1.07 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_skipped.bam
4.25 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_singleAndMulti.bed.gz
2.64 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_reads_single.bed.gz
1.25 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_single.bedgraph
4.60 MB
STAR
m6a-molm13-wt2-20180515-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
29.08 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bam.bai
3.53 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_SJ.out.tab
402.17 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bam
237.37 MB
m6a-molm13-wt2-20180515-jufastqgz_unmapped.bw
31.73 kB
STAR
m6a-molm13-wt2-20180515-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt2-20180515-ju_trimmed.bam
636.22 MB
m6a-molm13-wt2-20180515-ju_trimmed_unmapped.out.mate1.fastq.gz
107.18 MB
m6a-molm13-wt2-20180515-ju_trimmed_stats.txt
1.79 kB
m6a-molm13-wt2-20180515-ju_trimmed_SJ.out.tab
0 B
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt2-20180515-ju.fastq.gz
396.42 MB
stderr.txt
1.11 kB
m6a-molm13-wt2-20180515-ju_fastqc.zip
465.11 kB
iCount summary
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_type.tsv
268 B
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_gene.tsv
825.90 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
644 B
FASTQ file (single-end)
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-ju.fastq.gz
66.02 MB
input-molm13-mt3-ko-total-rna-20180921-ju_fastqc.zip
457.65 kB
stderr.txt
1.40 kB
FASTQ file (single-end)
m6a-molm13-mt3-ko-2-20180522-ju.fastq.gz
46.32 MB
fastqc
Directory
stderr.txt
1.21 kB
m6a-molm13-mt3-ko-2-20180522-ju_fastqc.zip
489.35 kB
iCount xlsites
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_singleAndMulti.bed.gz
84.40 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_single.bed.gz
55.81 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_single.bedgraph
192 B
iCount reads proxy
fastqc
Directory
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.fastq.gz
12.70 MB
stderr.txt
1.66 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_fastqc.zip
459.55 kB
iCount xlsites
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single.bed.gz
407.48 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single.bedgraph
1.62 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_skipped.bam
2.93 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
954.76 kB
STAR
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
4.08 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_stats.txt
1.80 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bam.bai
2.47 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bw
23.17 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped.bam
28.86 MB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_SJ.out.tab
134.04 kB
iCount summary
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_type.tsv
265 B
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_gene.tsv
609.63 kB
m6a-molm13-mt3-ko-2-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
638 B
Cutadapt (single-end)
report.txt
698 B
fastqc
Directory
m6a-molm13-mt3-ko-2-20180522-ju_trimmed_fastqc.zip
466.10 kB
m6a-molm13-mt3-ko-2-20180522-ju_trimmed.fastq.gz
47.94 MB
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt2-20180522-ju.fastq.gz
179.89 MB
stderr.txt
1.11 kB
m6a-molm13-wt2-20180522-ju_fastqc.zip
472.23 kB
STAR
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bam.bai
3.22 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
15.93 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bam
112.66 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped.bw
30.45 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_SJ.out.tab
490.59 kB
iCount reads proxy
m6a-molm13-wt2-20180522-jufastqgz_unmapped.fastq.gz
46.54 MB
fastqc
Directory
stderr.txt
1.48 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_fastqc.zip
447.49 kB
iCount xlsites
m6a-molm13-wt2-20180522-jufastqgz_unmapped_skipped.bam
3.49 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single.bed.gz
1.31 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
2.72 MB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single.bedgraph
5.72 MB
iCount summary
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_type.tsv
265 B
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_gene.tsv
871.64 kB
m6a-molm13-wt2-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
643 B
Cutadapt (single-end)
fastqc
Directory
m6a-molm13-wt2-20180522-ju_trimmed_fastqc.zip
462.61 kB
m6a-molm13-wt2-20180522-ju_trimmed.fastq.gz
186.88 MB
report.txt
693 B
STAR
m6a-molm13-wt2-20180522-ju_trimmed.bam.bai
20.56 kB
m6a-molm13-wt2-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
46.54 MB
m6a-molm13-wt2-20180522-ju_trimmed.bam
297.41 MB
m6a-molm13-wt2-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-wt2-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-wt2-20180522-ju_trimmed.bw
106.70 kB
STAR
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bam.bai
3.03 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_SJ.out.tab
478.32 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_stats.txt
1.81 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bam
98.20 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped.bw
29.28 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
16.15 MB
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-wt1-20180522-ju_fastqc.zip
444.92 kB
stderr.txt
1.11 kB
m6a-molm13-wt1-20180522-ju.fastq.gz
168.81 MB
iCount xlsites
m6a-molm13-wt1-20180522-ju_trimmed_single.bed.gz
72.90 kB
m6a-molm13-wt1-20180522-ju_trimmed_singleAndMulti.bed.gz
111.55 kB
m6a-molm13-wt1-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-wt1-20180522-ju_trimmed_single.bedgraph
187 B
iCount xlsites
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single.bed.gz
1.14 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_skipped.bam
3.15 kB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
2.32 MB
m6a-molm13-wt1-20180522-jufastqgz_unmapped_single.bedgraph
5.01 MB
iCount xlsites
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single.bed.gz
454.57 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_singleAndMulti.bed.gz
1.05 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_skipped.bam
3.53 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single.bedgraph
1.85 MB
STAR
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bam.bai
2.50 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
5.51 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_stats.txt
1.80 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bam
33.05 MB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_SJ.out.tab
170.98 kB
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped.bw
23.78 kB
iCount summary
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_type.tsv
266 B
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_subtype.tsv
640 B
m6a-molm13-mt3-ko-1-20180522-jufastqgz_unmapped_single_summary_gene.tsv
638.67 kB
STAR
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bam.bai
20.14 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_unmapped.out.mate1.fastq.gz
14.94 MB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_SJ.out.tab
0 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_stats.txt
1.78 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bam
75.31 MB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.bw
106.17 kB
Cutadapt (single-end)
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-ju_trimmed.fastq.gz
53.29 MB
report.txt
699 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_fastqc.zip
422.46 kB
FASTQ file (single-end)
fastqc
Directory
m6a-molm13-mt3-ko-1-20180522-ju_fastqc.zip
462.67 kB
m6a-molm13-mt3-ko-1-20180522-ju.fastq.gz
54.79 MB
stderr.txt
1.21 kB
iCount xlsites
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_single.bedgraph
192 B
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_singleAndMulti.bed.gz
84.95 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-mt3-ko-1-20180522-ju_trimmed_single.bed.gz
58.21 kB
iCount summary
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_type.tsv
263 B
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_subtype.tsv
630 B
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single_summary_gene.tsv
383.47 kB
iCount xlsites
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_skipped.bam
3.17 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single.bedgraph
597.19 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_singleAndMulti.bed.gz
400.59 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_single.bed.gz
157.79 kB
STAR
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bam.bai
1.94 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bam
21.54 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_SJ.out.tab
76.55 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_stats.txt
1.80 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.bw
20.65 kB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
8.31 MB
iCount reads proxy
stderr.txt
1.77 kB
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped.fastq.gz
12.79 MB
input-molm13-mt3-ko-total-rna-20180921-jufastqgz_unmapped_fastqc.zip
477.11 kB
STAR
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bam.bai
20.07 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bam
91.49 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_unmapped.out.mate1.fastq.gz
12.79 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_stats.txt
1.78 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_SJ.out.tab
0 B
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.bw
106.02 kB
Cutadapt (single-end)
report.txt
708 B
fastqc
Directory
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed.fastq.gz
67.48 MB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_fastqc.zip
468.05 kB
iCount RNA-maps
results.tar.gz
471.54 kB
Cutadapt (single-end)
report.txt
704 B
fastqc
Directory
input-molm13-wt-total-rna-20180921-ju_trimmed_fastqc.zip
454.66 kB
input-molm13-wt-total-rna-20180921-ju_trimmed.fastq.gz
217.37 MB
iCount xlsites
input-molm13-wt-total-rna-20180921-ju_trimmed_skipped.bam
3.97 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_single.bedgraph
222 B
input-molm13-wt-total-rna-20180921-ju_trimmed_single.bed.gz
88.40 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_singleAndMulti.bed.gz
128.52 kB
iCount xlsites
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_singleAndMulti.bed.gz
836.35 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_skipped.bam
3.52 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single.bed.gz
335.76 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single.bedgraph
1.31 MB
iCount RNA-maps
results.tar.gz
588.74 kB
iCount reads proxy
fastqc
Directory
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped.fastq.gz
43.42 MB
stderr.txt
1.69 kB
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_fastqc.zip
466.23 kB
iCount summary
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_type.tsv
265 B
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_subtype.tsv
636 B
input-molm13-wt-total-rna-20180921-jufastqgz_unmapped_single_summary_gene.tsv
551.58 kB
FASTQ file (single-end)
input-molm13-wt-total-rna-20180921-ju_fastqc.zip
450.88 kB
fastqc
Directory
input-molm13-wt-total-rna-20180921-ju.fastq.gz
213.07 MB
stderr.txt
1.32 kB
iCount xlsites
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_single.bed.gz
70.77 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_singleAndMulti.bed.gz
95.43 kB
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_single.bedgraph
230 B
input-molm13-mt3-ko-total-rna-20180921-ju_trimmed_skipped.bam
3.97 kB
iCount xlsites
m6a-molm13-wt2-20180522-ju_trimmed_single.bed.gz
75.86 kB
m6a-molm13-wt2-20180522-ju_trimmed_singleAndMulti.bed.gz
119.19 kB
m6a-molm13-wt2-20180522-ju_trimmed_skipped.bam
3.97 kB
m6a-molm13-wt2-20180522-ju_trimmed_single.bedgraph
187 B
STAR
input-molm13-wt-total-rna-20180921-ju_trimmed.bam
294.82 MB
input-molm13-wt-total-rna-20180921-ju_trimmed.bam.bai
20.56 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_stats.txt
1.78 kB
input-molm13-wt-total-rna-20180921-ju_trimmed_SJ.out.tab
0 B
input-molm13-wt-total-rna-20180921-ju_trimmed_unmapped.out.mate1.fastq.gz
43.42 MB
input-molm13-wt-total-rna-20180921-ju_trimmed.bw
106.52 kB
FASTQ file (single-end)
m6a-molm13-wt1-20180515-ju.fastq.gz
355.76 MB
fastqc
Directory
m6a-molm13-wt1-20180515-ju_fastqc.zip
455.14 kB
stderr.txt
1.11 kB
iCount RNA-maps
m6a-molm13-wt1-20180515-jufastqgz_unmapped_single.tar.gz
750.66 kB