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Folder iconSTAU1 KD polysome profiling

Cristina Militti
Sept. 10, 2019

E95_STAU1_rescue_tot.1

BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_statistics.txt.gz
177 B
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
935.69 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
935.73 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.21 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.94 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.27 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
649.57 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
768.49 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.48 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.34 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam
951.40 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.76 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.85 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_cpm.tab.gz
157.80 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.21 kB
STAR
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
648.87 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam
950.95 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
768.02 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.15 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bw
77.54 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
936.51 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
936.21 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
Subsample FASTQ (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.fastq.gz
934.98 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
769.01 kB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
650.23 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam
951.40 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.34 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.48 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam.bai
264 B
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
921.26 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
1.04 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam
15.59 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_SJ.out.tab
103 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_stats.txt
1.77 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam
1.43 kB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
927.08 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_stats.txt
1.77 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
1.04 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam.bai
368 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_SJ.out.tab
129 B
STAR
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
649.93 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
769.09 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.48 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam
951.48 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.34 kB
Samtools idxstats
idxstat_report.txt
3.87 kB
BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
936.17 kB
featureCounts
featureCounts_rc.txt.summary
395 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_rc.tab.gz
200.20 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_fpkm.tab.gz
173.04 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_featureCounts_rc.txt.gz
4.38 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_cpm.tab.gz
157.79 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_tpm.tab.gz
173.13 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_expressions.txt.gz
487.18 kB
STAR
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
649.37 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam
950.98 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
768.51 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.15 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.54 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.76 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.22 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.85 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_cpm.tab.gz
157.80 kB
QoRTs QC
qorts_report.zip
7.87 MB
qorts_output
Directory
MultiQC
multiqc_data
Directory
multiqc_report.html
1.22 MB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_cpm.tab.gz
153.95 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_rc.tab.gz
153.26 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
155.39 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_expressions.txt.gz
396.95 kB
BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed_preprocessed.fastq.gz
933.66 kB
E95_STAU1_rescue_tot.1_preprocessed_statistics.txt.gz
206 B
STAR
E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
767.29 kB
E95_STAU1_rescue_tot.1_preprocessed.bam
1.04 MB
E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
648.95 kB
E95_STAU1_rescue_tot.1_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab
11.34 kB
E95_STAU1_rescue_tot.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed.bw
77.40 kB
BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed.fastq.gz
932.81 kB
E95_STAU1_rescue_tot.1_statistics.txt.gz
448 B
FASTQ file (paired-end)
E95_STAU1_rescue_tot.2.fastq.gz
108.64 MB
E95_STAU1_rescue_tot.1.fastq.gz
119.27 MB
fastqc
Directory
stderr.txt
2.06 kB
E95_STAU1_rescue_tot.1_fastqc.zip
492.61 kB
E95_STAU1_rescue_tot.2_fastqc.zip
539.32 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
766.81 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
648.57 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
77.54 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
11.15 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.05 MB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.27 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
396.76 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.21 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
156.76 kB
E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
395.66 kB
E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
157.85 kB
E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
154.85 kB

E96_STAU1_rescue_P4-P8.1

STAR
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
552.63 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
618.46 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
72.21 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
8.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
919.79 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
864.58 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
945.14 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.fastq.gz
944.33 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_statistics.txt.gz
204 B
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed.fastq.gz
864.53 kB
STAR
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
617.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
552.65 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam
919.73 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
8.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bw
72.21 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
402.19 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
402.18 kB
STAR
E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab
7.97 kB
E96_STAU1_rescue_P4-P8.1_preprocessed.bam
1021.05 kB
E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
556.92 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
623.05 kB
E96_STAU1_rescue_P4-P8.1_preprocessed.bw
70.81 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz
154.87 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz
157.99 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz
156.80 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz
395.98 kB
STAR
E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
618.19 kB
E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
553.28 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P4-P8.1_preprocessed.bam
1.02 MB
E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.1_preprocessed.bw
72.12 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab
8.46 kB
STAR
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
617.50 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam
1.02 MB
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
552.48 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
8.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bw
72.21 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed.fastq.gz
863.07 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_statistics.txt.gz
204 B
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.fastq.gz
942.85 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz
862.55 kB
E96_STAU1_rescue_P4-P8.1_statistics.txt.gz
425 B
E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz
941.75 kB
FASTQ file (paired-end)
E96_STAU1_rescue_P4-P8.1.fastq.gz
138.71 MB
E96_STAU1_rescue_P4-P8.2.fastq.gz
127.51 MB
fastqc
Directory
stderr.txt
2.14 kB
E96_STAU1_rescue_P4-P8.1_fastqc.zip
484.64 kB
E96_STAU1_rescue_P4-P8.2_fastqc.zip
545.43 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz
155.27 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz
158.40 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.19 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz
397.38 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
397.03 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.1_statistics.txt.gz
425 B
E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz
941.89 kB
E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz
862.67 kB

E96_STAU1_rescue_tot.1

BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_tot.1_preprocessed_statistics.txt.gz
207 B
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.fastq.gz
796.71 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed.fastq.gz
760.03 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
485.27 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.03 MB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
447.98 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
69.94 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
9.52 kB
BBDuk (paired-end)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
797.93 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
760.56 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_statistics.txt.gz
188 B
fastqc
Directory
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.77 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
485.51 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
448.53 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam
1.03 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bw
69.94 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
9.52 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
401.75 kB
FASTQ file (paired-end)
fastqc
Directory
E96_STAU1_rescue_tot.2.fastq.gz
104.50 MB
E96_STAU1_rescue_tot.1.fastq.gz
110.12 MB
stderr.txt
2.06 kB
E96_STAU1_rescue_tot.2_fastqc.zip
533.52 kB
E96_STAU1_rescue_tot.1_fastqc.zip
495.13 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
484.88 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
448.00 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.18 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
9.52 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
69.94 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
156.71 kB
E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
395.52 kB
E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
154.70 kB
E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
157.68 kB
STAR
E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
448.45 kB
E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
484.80 kB
E96_STAU1_rescue_tot.1_preprocessed.bam
1.17 MB
E96_STAU1_rescue_tot.1_preprocessed.bam.bai
1.47 MB
E96_STAU1_rescue_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed.bw
69.54 kB
E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab
9.88 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_tot.1_statistics.txt.gz
411 B
E96_STAU1_rescue_tot.2_preprocessed.fastq.gz
758.38 kB
E96_STAU1_rescue_tot.1_preprocessed.fastq.gz
794.83 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
155.02 kB
E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
396.57 kB
BBDuk (paired-end)
E96_STAU1_rescue_tot.1_preprocessed.fastq.gz
794.73 kB
E96_STAU1_rescue_tot.2_preprocessed.fastq.gz
758.50 kB
fastqc
Directory
E96_STAU1_rescue_tot.1_statistics.txt.gz
411 B
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
396.58 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
485.24 kB
E96_STAU1_rescue_tot.1_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
448.60 kB
E96_STAU1_rescue_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab
9.46 kB
E96_STAU1_rescue_tot.1_preprocessed.bam
1.18 MB
E96_STAU1_rescue_tot.1_preprocessed.bw
69.85 kB
BBDuk (paired-end)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.fastq.gz
796.02 kB
fastqc
Directory
E96_STAU1_rescue_tot.1_preprocessed_statistics.txt.gz
207 B
E96_STAU1_rescue_tot.2_preprocessed_preprocessed.fastq.gz
758.64 kB

E96_STAU1_KD_P1-P3.1

STAR
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
614.74 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
506.23 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
12.27 kB
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
498.75 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.45 MB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
58.82 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
785.97 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
645.85 kB
HTSeq-count (CPM)
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.46 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.32 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.36 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
400.06 kB
HTSeq-count (CPM)
E96_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz
153.98 kB
E96_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz
393.64 kB
E96_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz
156.01 kB
E96_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz
156.14 kB
STAR
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
498.21 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
614.19 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bam.bai
1.45 MB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bam
572.38 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
12.27 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bw
58.82 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
394.88 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
156.46 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.36 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
154.32 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz
783.05 kB
E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz
643.48 kB
E96_STAU1_KD_P1-P3.1_statistics.txt.gz
368 B
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
1.98 kB
E96_STAU1_KD_P1-P3.1.fastq.gz
38.30 MB
E96_STAU1_KD_P1-P3.2.fastq.gz
35.05 MB
E96_STAU1_KD_P1-P3.1_fastqc.zip
483.96 kB
E96_STAU1_KD_P1-P3.2_fastqc.zip
539.32 kB
STAR
E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai
1.45 MB
E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
498.42 kB
E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
614.07 kB
E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab
12.21 kB
E96_STAU1_KD_P1-P3.1_preprocessed.bam
569.94 kB
E96_STAU1_KD_P1-P3.1_preprocessed.bw
58.33 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed.fastq.gz
644.23 kB
E96_STAU1_KD_P1-P3.1_preprocessed_statistics.txt.gz
206 B
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed.fastq.gz
784.38 kB

E96_STAU1_KD_tot.1

BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.18 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.41 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_statistics.txt.gz
159 B
STAR
E96_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
862.17 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.04 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam
1.11 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bw
96.00 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
15.36 kB
HTSeq-count (CPM)
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.39 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.03 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.54 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.28 kB
BBDuk (paired-end)
E96_STAU1_KD_tot.1_preprocessed.fastq.gz
1.41 MB
fastqc
Directory
E96_STAU1_KD_tot.2_preprocessed.fastq.gz
1.18 MB
E96_STAU1_KD_tot.1_statistics.txt.gz
437 B
STAR
E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
863.66 kB
E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
1.04 MB
E96_STAU1_KD_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed.bam.bai
1.50 MB
E96_STAU1_KD_tot.1_preprocessed.bam
1.25 MB
E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab
15.45 kB
E96_STAU1_KD_tot.1_preprocessed.bw
96.03 kB
FASTQ file (paired-end)
E96_STAU1_KD_tot.2.fastq.gz
101.76 MB
fastqc
Directory
stderr.txt
1.90 kB
E96_STAU1_KD_tot.1_fastqc.zip
485.65 kB
E96_STAU1_KD_tot.1.fastq.gz
110.93 MB
E96_STAU1_KD_tot.2_fastqc.zip
543.19 kB
STAR
E96_STAU1_KD_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.03 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bam
1.26 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
860.99 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_SJ.out.tab
15.36 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bw
96.00 kB
HTSeq-count (CPM)
E96_STAU1_KD_tot.1_preprocessed_preprocessed_cpm.tab.gz
159.03 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.39 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_expressions.txt.gz
398.13 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_rc.tab.gz
155.54 kB
HTSeq-count (CPM)
E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz
157.08 kB
E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz
158.73 kB
E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz
155.24 kB
E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz
396.72 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_tot.1_preprocessed_statistics.txt.gz
206 B
E96_STAU1_KD_tot.2_preprocessed_preprocessed.fastq.gz
1.18 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.fastq.gz
1.41 MB

E96_STAU1_rescue_80S.1

BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed_preprocessed.fastq.gz
582.00 kB
E96_STAU1_rescue_80S.1_preprocessed_statistics.txt.gz
205 B
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.fastq.gz
585.67 kB
BBDuk (paired-end)
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
582.05 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
585.97 kB
fastqc
Directory
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_statistics.txt.gz
160 B
STAR
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
382.14 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
368.12 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam
615.14 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bw
44.91 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_SJ.out.tab
6.53 kB
STAR
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
382.17 kB
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
368.30 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam
615.37 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
6.53 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bw
44.91 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
399.65 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.66 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.fastq.gz
584.99 kB
E96_STAU1_rescue_80S.1_preprocessed_statistics.txt.gz
205 B
E96_STAU1_rescue_80S.2_preprocessed_preprocessed.fastq.gz
581.18 kB
STAR
E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
382.27 kB
E96_STAU1_rescue_80S.1_preprocessed.bam
699.37 kB
E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
369.35 kB
E96_STAU1_rescue_80S.1_preprocessed.bam.bai
1.41 MB
E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab
6.62 kB
E96_STAU1_rescue_80S.1_preprocessed.bw
44.91 kB
E96_STAU1_rescue_80S.1_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz
155.64 kB
E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz
153.48 kB
E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz
155.64 kB
E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz
393.26 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz
156.12 kB
E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz
156.02 kB
E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz
394.45 kB
STAR
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
382.26 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam
706.79 kB
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
368.16 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_SJ.out.tab
6.53 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bw
44.91 kB
FASTQ file (paired-end)
E96_STAU1_rescue_80S.2.fastq.gz
70.14 MB
fastqc
Directory
E96_STAU1_rescue_80S.1.fastq.gz
67.42 MB
stderr.txt
2.06 kB
E96_STAU1_rescue_80S.2_fastqc.zip
538.56 kB
E96_STAU1_rescue_80S.1_fastqc.zip
498.27 kB
BBDuk (paired-end)
E96_STAU1_rescue_80S.1_preprocessed.fastq.gz
583.53 kB
E96_STAU1_rescue_80S.1_statistics.txt.gz
355 B
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed.fastq.gz
580.34 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.50 kB
BBDuk (paired-end)
E96_STAU1_rescue_80S.1_preprocessed.fastq.gz
583.52 kB
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed.fastq.gz
580.72 kB
E96_STAU1_rescue_80S.1_statistics.txt.gz
355 B
STAR
E96_STAU1_rescue_80S.1_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab
6.53 kB
E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
368.27 kB
E96_STAU1_rescue_80S.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_80S.1_preprocessed.bam
705.45 kB
E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
381.29 kB
E96_STAU1_rescue_80S.1_preprocessed.bw
44.90 kB

E95_STAU1_rescue_80S.1

BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_80S.1_preprocessed.fastq.gz
749.27 kB
E95_STAU1_rescue_80S.2_preprocessed.fastq.gz
676.21 kB
E95_STAU1_rescue_80S.1_statistics.txt.gz
345 B
BBDuk (paired-end)
E95_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
678.81 kB
fastqc
Directory
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
752.42 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_statistics.txt.gz
192 B
STAR
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
519.31 kB
E95_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
454.88 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.41 MB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bw
51.95 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
9.79 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam
693.47 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.10 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.16 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.03 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.63 kB
STAR
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
518.22 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
454.78 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed.bam.bai
1.41 MB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed.bam
793.89 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed.bw
51.95 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_SJ.out.tab
9.79 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_80S.2_preprocessed_preprocessed.fastq.gz
677.07 kB
E95_STAU1_rescue_80S.1_preprocessed_statistics.txt.gz
205 B
E95_STAU1_rescue_80S.1_preprocessed_preprocessed.fastq.gz
749.85 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.10 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.15 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
154.02 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.51 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_rescue_80S.2.fastq.gz
57.38 MB
E95_STAU1_rescue_80S.1.fastq.gz
58.35 MB
E95_STAU1_rescue_80S.1_fastqc.zip
495.82 kB
E95_STAU1_rescue_80S.2_fastqc.zip
541.14 kB
stderr.txt
2.06 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz
155.84 kB
E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz
153.69 kB
E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz
393.57 kB
E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz
155.99 kB
STAR
E95_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
517.63 kB
E95_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
454.09 kB
E95_STAU1_rescue_80S.1_preprocessed.bam.bai
1.41 MB
E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab
9.60 kB
E95_STAU1_rescue_80S.1_preprocessed.bam
799.00 kB
E95_STAU1_rescue_80S.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_80S.1_preprocessed.bw
52.50 kB

E95_STAU1_KD_P4-P8.1

STAR
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.89 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
1.41 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
13.57 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
107.35 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.40 MB
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.95 MB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.88 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
404.64 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
160.17 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
156.15 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed.fastq.gz
2.39 MB
E95_STAU1_KD_P4-P8.1_preprocessed_statistics.txt.gz
205 B
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed.fastq.gz
1.95 MB
STAR
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.89 MB
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam
1.61 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bw
107.35 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
13.57 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz
155.83 kB
E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz
159.84 kB
E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz
398.21 kB
E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.59 kB
STAR
E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
1.88 MB
E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P4-P8.1_preprocessed.bam
1.62 MB
E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab
13.55 kB
E95_STAU1_KD_P4-P8.1_preprocessed.bw
108.13 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.1.fastq.gz
62.32 MB
E95_STAU1_KD_P4-P8.2.fastq.gz
56.47 MB
E95_STAU1_KD_P4-P8.1_fastqc.zip
490.07 kB
E95_STAU1_KD_P4-P8.2_fastqc.zip
537.84 kB
stderr.txt
1.98 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz
1.95 MB
E95_STAU1_KD_P4-P8.1_statistics.txt.gz
383 B
E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz
2.39 MB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.88 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
399.49 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
156.15 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
160.17 kB

E95_STAU1_KD_tot.1

BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.48 MB
E95_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.22 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_statistics.txt.gz
140 B
STAR
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam
941.20 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.17 MB
E95_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
967.26 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
10.41 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bw
80.31 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.24 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
402.17 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.39 kB
BBDuk (paired-end)
E95_STAU1_KD_tot.2_preprocessed.fastq.gz
1.22 MB
fastqc
Directory
E95_STAU1_KD_tot.1_statistics.txt.gz
377 B
E95_STAU1_KD_tot.1_preprocessed.fastq.gz
1.48 MB
STAR
E95_STAU1_KD_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
966.63 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed.bw
80.31 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_SJ.out.tab
10.41 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed.bam
1.03 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.17 MB
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.24 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.39 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_expressions.txt.gz
397.01 kB
FASTQ file (paired-end)
E95_STAU1_KD_tot.1.fastq.gz
78.92 MB
fastqc
Directory
E95_STAU1_KD_tot.2.fastq.gz
71.73 MB
stderr.txt
1.90 kB
E95_STAU1_KD_tot.1_fastqc.zip
491.85 kB
E95_STAU1_KD_tot.2_fastqc.zip
545.11 kB
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz
156.85 kB
E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz
154.96 kB
E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz
158.02 kB
E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz
395.87 kB
STAR
E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
1.17 MB
E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
964.45 kB
E95_STAU1_KD_tot.1_preprocessed.bam
1.03 MB
E95_STAU1_KD_tot.1_preprocessed.bam.bai
1.49 MB
E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab
10.66 kB
E95_STAU1_KD_tot.1_preprocessed.bw
80.40 kB
E95_STAU1_KD_tot.1_preprocessed_stats.txt
1.78 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_tot.2_preprocessed_preprocessed.fastq.gz
1.22 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed.fastq.gz
1.48 MB
E95_STAU1_KD_tot.1_preprocessed_statistics.txt.gz
204 B

E95_STAU1_rescue_P4-P8.1

BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.16 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1009.49 kB
STAR
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
731.76 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
880.55 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
74.58 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
842.06 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
10.87 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
402.04 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.19 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.26 kB
STAR
E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
727.93 kB
E95_STAU1_rescue_P4-P8.1_preprocessed.bam
953.26 kB
E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai
1.48 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
875.62 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_P4-P8.1_preprocessed.bw
75.08 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab
10.61 kB
BBDuk (paired-end)
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.fastq.gz
1.15 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_statistics.txt.gz
206 B
fastqc
Directory
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed.fastq.gz
1006.84 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P4-P8.1_statistics.txt.gz
419 B
E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz
1006.13 kB
E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz
1.15 MB
HTSeq-count (CPM)
E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz
156.77 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz
395.74 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz
154.84 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz
157.99 kB
STAR
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
880.18 kB
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
730.75 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam.bai
1.48 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam
943.40 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bw
74.58 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
10.87 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_rescue_P4-P8.2.fastq.gz
75.84 MB
E95_STAU1_rescue_P4-P8.1.fastq.gz
83.12 MB
stderr.txt
2.14 kB
E95_STAU1_rescue_P4-P8.2_fastqc.zip
539.51 kB
E95_STAU1_rescue_P4-P8.1_fastqc.zip
478.86 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
396.88 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.26 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.19 kB

E96_STAU1_KD_80S.1

BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
1007.64 kB
STAR
E96_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
763.64 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
893.37 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.44 MB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam
795.23 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bw
59.75 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.73 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.07 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
400.06 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.48 kB
STAR
E96_STAU1_KD_80S.1_preprocessed.bam
896.21 kB
E96_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
896.27 kB
E96_STAU1_KD_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
766.35 kB
E96_STAU1_KD_80S.1_preprocessed.bam.bai
1.44 MB
E96_STAU1_KD_80S.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_80S.1_preprocessed.bw
58.78 kB
E96_STAU1_KD_80S.1_preprocessed_SJ.out.tab
11.42 kB
STAR
E96_STAU1_KD_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
893.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bam.bai
1.44 MB
E96_STAU1_KD_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
762.99 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bam
908.19 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_SJ.out.tab
11.73 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bw
59.75 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_rc.tab.gz
154.07 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.48 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.89 kB
FASTQ file (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.1.fastq.gz
50.85 MB
stderr.txt
1.90 kB
E96_STAU1_KD_80S.2.fastq.gz
50.53 MB
E96_STAU1_KD_80S.1_fastqc.zip
488.84 kB
E96_STAU1_KD_80S.2_fastqc.zip
547.84 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz
155.89 kB
E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz
155.78 kB
E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz
153.65 kB
E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz
393.43 kB
BBDuk (paired-end)
E96_STAU1_KD_80S.1_statistics.txt.gz
374 B
fastqc
Directory
E96_STAU1_KD_80S.1_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.2_preprocessed.fastq.gz
1004.74 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.2_preprocessed_preprocessed.fastq.gz
1005.29 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.1_preprocessed_statistics.txt.gz
205 B

E96_STAU1_KD_P4-P8.1

BBDuk (paired-end)
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
177 B
fastqc
Directory
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.76 MB
STAR
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.34 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
103.91 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
1.31 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
19.83 kB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.64 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.52 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.54 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.76 kB
STAR
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
19.83 kB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam
1.49 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bw
103.91 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.34 MB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.64 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.76 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
159.54 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
398.39 kB
FASTQ file (paired-end)
E96_STAU1_KD_P4-P8.2.fastq.gz
107.47 MB
fastqc
Directory
E96_STAU1_KD_P4-P8.1.fastq.gz
119.94 MB
E96_STAU1_KD_P4-P8.2_fastqc.zip
537.72 kB
stderr.txt
1.98 kB
E96_STAU1_KD_P4-P8.1_fastqc.zip
480.61 kB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz
155.39 kB
E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz
159.00 kB
E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.26 kB
E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz
397.08 kB
STAR
E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed.bw
102.95 kB
E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab
19.63 kB
E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
1.34 MB
E96_STAU1_KD_P4-P8.1_preprocessed.bam
1.48 MB
E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz
1.75 MB
E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_statistics.txt.gz
445 B
BBDuk (paired-end)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.fastq.gz
1.76 MB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_preprocessed_statistics.txt.gz
203 B
fastqc
Directory

E95_STAU1_KD_80S.1

BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
772.88 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_statistics.txt.gz
176 B
fastqc
Directory
E95_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
657.32 kB
STAR
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
610.87 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
507.84 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.41 MB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam
492.90 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
9.13 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bw
47.63 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
155.82 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.44 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
153.91 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz
155.68 kB
E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz
155.60 kB
E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz
393.14 kB
E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz
153.56 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_cpm.tab.gz
155.82 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_rc.tab.gz
153.91 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.27 kB
FASTQ file (paired-end)
E95_STAU1_KD_80S.2.fastq.gz
42.24 MB
E95_STAU1_KD_80S.1.fastq.gz
43.99 MB
stderr.txt
1.90 kB
fastqc
Directory
E95_STAU1_KD_80S.1_fastqc.zip
495.51 kB
E95_STAU1_KD_80S.2_fastqc.zip
536.26 kB
BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed.fastq.gz
769.17 kB
E95_STAU1_KD_80S.1_statistics.txt.gz
334 B
fastqc
Directory
E95_STAU1_KD_80S.2_preprocessed.fastq.gz
654.83 kB
STAR
E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
508.61 kB
E95_STAU1_KD_80S.1_preprocessed.bam.bai
1.42 MB
E95_STAU1_KD_80S.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
609.49 kB
E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab
9.36 kB
E95_STAU1_KD_80S.1_preprocessed.bw
47.93 kB
E95_STAU1_KD_80S.1_preprocessed.bam
557.73 kB
BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed_statistics.txt.gz
206 B
fastqc
Directory
E95_STAU1_KD_80S.1_preprocessed_preprocessed.fastq.gz
770.87 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed.fastq.gz
655.28 kB
STAR
E95_STAU1_KD_80S.1_preprocessed_preprocessed_SJ.out.tab
9.13 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
507.23 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bam
562.49 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
610.23 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bw
47.63 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bam.bai
1.41 MB

E96_STAU1_rescue_P1-P3.1

BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_statistics.txt.gz
207 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
196 B
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.26 MB
FASTQ file (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2.fastq.gz
171.20 MB
E96_STAU1_rescue_P1-P3.1.fastq.gz
180.96 MB
E96_STAU1_rescue_P1-P3.1_fastqc.zip
490.67 kB
stderr.txt
2.14 kB
E96_STAU1_rescue_P1-P3.2_fastqc.zip
538.17 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
864.89 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam
1.50 MB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
788.82 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
13.34 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bw
82.41 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
82.41 kB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
789.35 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
13.34 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
865.76 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.52 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
403.75 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.76 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.52 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
863.63 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bam
1.71 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
789.61 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed.bw
82.31 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab
13.34 kB
STAR
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
788.50 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
864.41 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam
1.72 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
13.34 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bw
82.41 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
398.60 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.52 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
397.10 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
158.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.05 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.14 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai
1.49 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
866.54 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bam
1.70 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab
13.59 kB
E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
791.87 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bw
82.12 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_statistics.txt.gz
454 B
E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
1.34 MB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.51 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
398.29 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
159.26 kB
BBDuk (paired-end)
E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
1.34 MB
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_statistics.txt.gz
454 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_statistics.txt.gz
207 B

E95_STAU1_KD_P1-P3.1

STAR
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.36 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.37 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
19.89 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.73 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
99.40 kB
BBDuk (paired-end)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.24 MB
fastqc
Directory
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.80 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
159 B
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.57 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.55 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.75 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.75 kB
STAR
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bam
1.56 MB
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.36 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.73 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
19.89 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed.bw
99.40 kB
BBDuk (paired-end)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed.fastq.gz
2.23 MB
fastqc
Directory
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed.fastq.gz
1.80 MB
E95_STAU1_KD_P1-P3.1_preprocessed_statistics.txt.gz
207 B
STAR
E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
1.73 MB
E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P1-P3.1_preprocessed.bam
1.56 MB
E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
1.36 MB
E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab
19.42 kB
E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P1-P3.1_preprocessed.bw
99.12 kB
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
1.98 kB
E95_STAU1_KD_P1-P3.2.fastq.gz
127.03 MB
E95_STAU1_KD_P1-P3.1_fastqc.zip
491.56 kB
E95_STAU1_KD_P1-P3.2_fastqc.zip
542.77 kB
E95_STAU1_KD_P1-P3.1.fastq.gz
142.14 MB
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.57 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
398.59 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.55 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.75 kB
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz
159.15 kB
E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.13 kB
E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz
397.74 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz
1.80 MB
E95_STAU1_KD_P1-P3.1_statistics.txt.gz
415 B
E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz
2.23 MB

E95_STAU1_rescue_P1-P3.1

BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.47 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
193 B
STAR
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.79 MB
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.88 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.79 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.52 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
22.37 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
114.59 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.95 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
160.76 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
156.10 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
405.16 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P1-P3.1_preprocessed_statistics.txt.gz
206 B
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed.fastq.gz
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.fastq.gz
2.46 MB
STAR
E95_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
1.79 MB
E95_STAU1_rescue_P1-P3.1_preprocessed.bam.bai
1.52 MB
E95_STAU1_rescue_P1-P3.1_preprocessed.bam
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab
22.01 kB
E95_STAU1_rescue_P1-P3.1_preprocessed.bw
113.78 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_stats.txt
1.79 kB
STAR
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.79 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam.bai
1.52 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam
2.12 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_stats.txt
1.79 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
22.37 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bw
114.59 kB
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
2.14 kB
E95_STAU1_rescue_P1-P3.1.fastq.gz
197.55 MB
E95_STAU1_rescue_P1-P3.2.fastq.gz
180.22 MB
E95_STAU1_rescue_P1-P3.1_fastqc.zip
484.04 kB
E95_STAU1_rescue_P1-P3.2_fastqc.zip
542.23 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.55 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.74 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
160.42 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
399.27 kB
BBDuk (paired-end)
E95_STAU1_rescue_P1-P3.1_statistics.txt.gz
442 B
fastqc
Directory
E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
2.46 MB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.95 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
156.10 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
400.02 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
160.76 kB

No Sample

STAR
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
614.74 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
506.23 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
12.27 kB
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
498.75 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.45 MB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
58.82 kB
STAR
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.36 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.37 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
19.89 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.73 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
99.40 kB
STAR
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.89 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
1.41 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
13.57 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
107.35 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
STAR
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
552.63 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
618.46 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
72.21 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
8.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
919.79 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
772.88 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_statistics.txt.gz
176 B
fastqc
Directory
E95_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
657.32 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_statistics.txt.gz
207 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed_preprocessed.fastq.gz
582.00 kB
E96_STAU1_rescue_80S.1_preprocessed_statistics.txt.gz
205 B
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.fastq.gz
585.67 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.48 MB
E95_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.22 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_statistics.txt.gz
140 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_tot.1_preprocessed_statistics.txt.gz
207 B
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.fastq.gz
796.71 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed.fastq.gz
760.03 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
1007.64 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
785.97 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
645.85 kB
BBDuk (paired-end)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.24 MB
fastqc
Directory
E95_STAU1_KD_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.80 MB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
159 B
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.40 MB
E95_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.95 MB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
864.58 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
945.14 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
196 B
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.26 MB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.fastq.gz
944.33 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_statistics.txt.gz
204 B
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed.fastq.gz
864.53 kB
BBDuk (paired-end)
E95_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
678.81 kB
fastqc
Directory
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
752.42 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_statistics.txt.gz
192 B
BBDuk (paired-end)
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed.fastq.gz
582.05 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.fastq.gz
585.97 kB
fastqc
Directory
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_statistics.txt.gz
160 B
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.16 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1009.49 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.18 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.41 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_statistics.txt.gz
159 B
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed.fastq.gz
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.fastq.gz
2.47 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_statistics.txt.gz
193 B
STAR
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
610.87 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
507.84 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.41 MB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam
492.90 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
9.13 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bw
47.63 kB
BBDuk (paired-end)
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_statistics.txt.gz
177 B
fastqc
Directory
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.76 MB
STAR
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
382.14 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
368.12 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bam
615.14 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed.bw
44.91 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_SJ.out.tab
6.53 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
864.89 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bam
1.50 MB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
788.82 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_SJ.out.tab
13.34 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.bw
82.41 kB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
82.41 kB
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
789.35 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
13.34 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.50 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
865.76 kB
STAR
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam
941.20 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.17 MB
E95_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
967.26 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
10.41 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bw
80.31 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
485.27 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.03 MB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
447.98 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
69.94 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
9.52 kB
STAR
E96_STAU1_KD_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
763.64 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
893.37 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.44 MB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bam
795.23 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed.bw
59.75 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
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E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
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STAR
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
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E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
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E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam
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E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_stats.txt
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E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
8.49 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bw
72.21 kB
BBDuk (paired-end)
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797.93 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
760.56 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_statistics.txt.gz
188 B
fastqc
Directory
BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
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177 B
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed.fastq.gz
935.69 kB
STAR
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519.31 kB
E95_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
454.88 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.41 MB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bw
51.95 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
9.79 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam
693.47 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
STAR
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
382.17 kB
E96_STAU1_rescue_80S.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
368.30 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam
615.37 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
6.53 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed.bw
44.91 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
STAR
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731.76 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
880.55 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
74.58 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
842.06 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
10.87 kB
STAR
E96_STAU1_KD_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
862.17 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.04 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bam
1.11 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed.bw
96.00 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
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STAR
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1.79 MB
E95_STAU1_rescue_P1-P3.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam
1.88 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_stats.txt
1.79 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bam.bai
1.52 MB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
22.37 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed.bw
114.59 kB
STAR
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1.34 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bw
103.91 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed.bam
1.31 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
19.83 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.77 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
155.82 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.44 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
153.91 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
399.65 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.52 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
403.75 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
BBDuk (paired-end)
fastqc
Directory
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935.73 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.24 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
402.17 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.39 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.21 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.94 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.27 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
485.51 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
448.53 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam
1.03 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bw
69.94 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
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E96_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
649.57 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
768.49 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.48 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.34 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed.bam
951.40 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
401.75 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.76 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.85 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_cpm.tab.gz
157.80 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_expressions.txt.gz
401.21 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.07 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
400.06 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.48 kB
STAR
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
648.87 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bam
950.95 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
768.02 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.15 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed.bw
77.54 kB
HTSeq-count (CPM)
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156.46 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.32 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.36 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
400.06 kB
BBDuk (paired-end)
fastqc
Directory
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936.51 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
1.05 MB
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.57 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.55 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.75 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.75 kB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.88 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
404.64 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
160.17 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
156.15 kB
HTSeq-count (CPM)
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157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
402.19 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
BBDuk (paired-end)
fastqc
Directory
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1.05 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.fastq.gz
936.21 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_statistics.txt.gz
140 B
Subsample FASTQ (paired-end)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.fastq.gz
1.05 MB
fastqc
Directory
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934.98 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.76 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.52 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
402.18 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.10 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.16 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
154.03 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.63 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
769.01 kB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
650.23 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bam
951.40 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_SJ.out.tab
11.34 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed.bw
77.48 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
399.66 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam.bai
264 B
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
921.26 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
1.04 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam
15.59 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_SJ.out.tab
103 B
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_stats.txt
1.77 kB
HTSeq-count (CPM)
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402.04 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.19 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
158.26 kB
HTSeq-count (CPM)
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157.39 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.03 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.54 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.28 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.95 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
160.76 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
156.10 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
405.16 kB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_HTseq_rc.txt.gz
157.64 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_expressions.txt.gz
403.52 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_cpm.tab.gz
159.54 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_preprocessed_rc.tab.gz
155.76 kB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam
1.43 kB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
927.08 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_stats.txt
1.77 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
1.04 MB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_preprocessed_preprocessed_preprocessed_downsampled.bam.bai
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STAR
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STAR
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HTSeq-count (CPM)
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HTSeq-count (CPM)
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Directory
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110.12 MB
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2.06 kB
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STAR
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STAR
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1.61 MB
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STAR
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1.02 MB
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STAR
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STAR
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1.79 MB
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2.12 MB
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1.45 MB
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STAR
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1.51 MB
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1.56 MB
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1.36 MB
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1.73 MB
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HTSeq-count (CPM)
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STAR
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864.41 kB
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1.78 kB
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1.72 MB
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1.50 MB
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STAR
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706.79 kB
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1.42 MB
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STAR
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1.48 MB
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1.02 MB
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8.49 kB
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BBDuk (paired-end)
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1.41 MB
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Directory
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1.18 MB
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BBDuk (paired-end)
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Directory
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BBDuk (paired-end)
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2.23 MB
fastqc
Directory
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1.80 MB
E95_STAU1_KD_P1-P3.1_preprocessed_statistics.txt.gz
207 B
BBDuk (paired-end)
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Directory
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863.07 kB
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204 B
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942.85 kB
BBDuk (paired-end)
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Directory
E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz
862.55 kB
E96_STAU1_rescue_P4-P8.1_statistics.txt.gz
425 B
E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz
941.75 kB
STAR
E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
1.73 MB
E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P1-P3.1_preprocessed.bam
1.56 MB
E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
1.36 MB
E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab
19.42 kB
E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P1-P3.1_preprocessed.bw
99.12 kB
BBDuk (paired-end)
E95_STAU1_rescue_tot.1_preprocessed.fastq.gz
1.05 MB
fastqc
Directory
E95_STAU1_rescue_tot.2_preprocessed.fastq.gz
932.81 kB
E95_STAU1_rescue_tot.1_statistics.txt.gz
448 B
STAR
E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
863.66 kB
E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
1.04 MB
E96_STAU1_KD_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed.bam.bai
1.50 MB
E96_STAU1_KD_tot.1_preprocessed.bam
1.25 MB
E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab
15.45 kB
E96_STAU1_KD_tot.1_preprocessed.bw
96.03 kB
HTSeq-count (CPM)
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
394.88 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
156.46 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.36 kB
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
154.32 kB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz
155.83 kB
E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz
159.84 kB
E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz
398.21 kB
E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.59 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz
155.68 kB
E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz
155.60 kB
E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz
393.14 kB
E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz
153.56 kB
FASTQ file (paired-end)
E95_STAU1_rescue_tot.2.fastq.gz
108.64 MB
E95_STAU1_rescue_tot.1.fastq.gz
119.27 MB
fastqc
Directory
stderr.txt
2.06 kB
E95_STAU1_rescue_tot.1_fastqc.zip
492.61 kB
E95_STAU1_rescue_tot.2_fastqc.zip
539.32 kB
FASTQ file (paired-end)
E96_STAU1_KD_tot.2.fastq.gz
101.76 MB
fastqc
Directory
stderr.txt
1.90 kB
E96_STAU1_KD_tot.1_fastqc.zip
485.65 kB
E96_STAU1_KD_tot.1.fastq.gz
110.93 MB
E96_STAU1_KD_tot.2_fastqc.zip
543.19 kB
FASTQ file (paired-end)
E96_STAU1_rescue_P4-P8.1.fastq.gz
138.71 MB
E96_STAU1_rescue_P4-P8.2.fastq.gz
127.51 MB
fastqc
Directory
stderr.txt
2.14 kB
E96_STAU1_rescue_P4-P8.1_fastqc.zip
484.64 kB
E96_STAU1_rescue_P4-P8.2_fastqc.zip
545.43 kB
STAR
E96_STAU1_KD_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
893.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bam.bai
1.44 MB
E96_STAU1_KD_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
762.99 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bam
908.19 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_SJ.out.tab
11.73 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.bw
59.75 kB
STAR
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
880.18 kB
E95_STAU1_rescue_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
730.75 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam.bai
1.48 MB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bam
943.40 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed.bw
74.58 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
10.87 kB
STAR
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_SJ.out.tab
19.83 kB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bam
1.49 MB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.bw
103.91 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.34 MB
STAR
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
766.81 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.49 MB
E95_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
648.57 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
77.54 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
11.15 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.05 MB
STAR
E96_STAU1_KD_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
1.03 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bam
1.26 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
860.99 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_SJ.out.tab
15.36 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.bw
96.00 kB
STAR
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
484.88 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
448.00 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bam
1.18 MB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_SJ.out.tab
9.52 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.bw
69.94 kB
HTSeq-count (CPM)
E95_STAU1_KD_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_cpm.tab.gz
155.82 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_rc.tab.gz
153.91 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.27 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.20 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_rc.tab.gz
154.07 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.48 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.89 kB
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.24 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.39 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_tot.1_preprocessed_preprocessed_expressions.txt.gz
397.01 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz
155.27 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz
158.40 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.19 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz
397.38 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.10 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.15 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
154.02 kB
E95_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.51 kB
FASTQ file (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.1.fastq.gz
50.85 MB
stderr.txt
1.90 kB
E96_STAU1_KD_80S.2.fastq.gz
50.53 MB
E96_STAU1_KD_80S.1_fastqc.zip
488.84 kB
E96_STAU1_KD_80S.2_fastqc.zip
547.84 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
398.60 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.31 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.52 kB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.64 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.76 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
159.54 kB
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
398.39 kB
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
1.98 kB
E95_STAU1_KD_P1-P3.2.fastq.gz
127.03 MB
E95_STAU1_KD_P1-P3.1_fastqc.zip
491.56 kB
E95_STAU1_KD_P1-P3.2_fastqc.zip
542.77 kB
E95_STAU1_KD_P1-P3.1.fastq.gz
142.14 MB
FASTQ file (paired-end)
E95_STAU1_KD_80S.2.fastq.gz
42.24 MB
E95_STAU1_KD_80S.1.fastq.gz
43.99 MB
stderr.txt
1.90 kB
fastqc
Directory
E95_STAU1_KD_80S.1_fastqc.zip
495.51 kB
E95_STAU1_KD_80S.2_fastqc.zip
536.26 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_rescue_80S.2.fastq.gz
57.38 MB
E95_STAU1_rescue_80S.1.fastq.gz
58.35 MB
E95_STAU1_rescue_80S.1_fastqc.zip
495.82 kB
E95_STAU1_rescue_80S.2_fastqc.zip
541.14 kB
stderr.txt
2.06 kB
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
2.14 kB
E95_STAU1_rescue_P1-P3.1.fastq.gz
197.55 MB
E95_STAU1_rescue_P1-P3.2.fastq.gz
180.22 MB
E95_STAU1_rescue_P1-P3.1_fastqc.zip
484.04 kB
E95_STAU1_rescue_P1-P3.2_fastqc.zip
542.23 kB
FASTQ file (paired-end)
E95_STAU1_KD_tot.1.fastq.gz
78.92 MB
fastqc
Directory
E95_STAU1_KD_tot.2.fastq.gz
71.73 MB
stderr.txt
1.90 kB
E95_STAU1_KD_tot.1_fastqc.zip
491.85 kB
E95_STAU1_KD_tot.2_fastqc.zip
545.11 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_rescue_P4-P8.2.fastq.gz
75.84 MB
E95_STAU1_rescue_P4-P8.1.fastq.gz
83.12 MB
stderr.txt
2.14 kB
E95_STAU1_rescue_P4-P8.2_fastqc.zip
539.51 kB
E95_STAU1_rescue_P4-P8.1_fastqc.zip
478.86 kB
FASTQ file (paired-end)
E96_STAU1_rescue_80S.2.fastq.gz
70.14 MB
fastqc
Directory
E96_STAU1_rescue_80S.1.fastq.gz
67.42 MB
stderr.txt
2.06 kB
E96_STAU1_rescue_80S.2_fastqc.zip
538.56 kB
E96_STAU1_rescue_80S.1_fastqc.zip
498.27 kB
FASTQ file (paired-end)
E96_STAU1_rescue_P1-P3.2.fastq.gz
171.20 MB
E96_STAU1_rescue_P1-P3.1.fastq.gz
180.96 MB
fastqc
Directory
E96_STAU1_rescue_P1-P3.1_fastqc.zip
490.67 kB
stderr.txt
2.14 kB
E96_STAU1_rescue_P1-P3.2_fastqc.zip
538.17 kB
FASTQ file (paired-end)
E96_STAU1_KD_P4-P8.2.fastq.gz
107.47 MB
fastqc
Directory
E96_STAU1_KD_P4-P8.1.fastq.gz
119.94 MB
E96_STAU1_KD_P4-P8.2_fastqc.zip
537.72 kB
stderr.txt
1.98 kB
E96_STAU1_KD_P4-P8.1_fastqc.zip
480.61 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.27 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
396.76 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.21 kB
HTSeq-count (CPM)
E96_STAU1_KD_tot.1_preprocessed_preprocessed_cpm.tab.gz
159.03 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.39 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_expressions.txt.gz
398.13 kB
E96_STAU1_KD_tot.1_preprocessed_preprocessed_rc.tab.gz
155.54 kB
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.57 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
398.59 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
159.55 kB
E95_STAU1_KD_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
155.75 kB
HTSeq-count (CPM)
E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz
156.85 kB
E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz
154.96 kB
E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz
158.02 kB
E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz
395.87 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.55 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.74 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
160.42 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
399.27 kB
HTSeq-count (CPM)
E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz
155.84 kB
E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz
153.69 kB
E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz
393.57 kB
E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz
155.99 kB
HTSeq-count (CPM)
E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz
155.89 kB
E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz
155.78 kB
E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz
153.65 kB
E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz
393.43 kB
HTSeq-count (CPM)
E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz
155.32 kB
E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz
159.15 kB
E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.13 kB
E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz
397.74 kB
HTSeq-count (CPM)
E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
156.76 kB
E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
395.66 kB
E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
157.85 kB
E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
154.85 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
397.10 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
158.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.05 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.14 kB
HTSeq-count (CPM)
E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz
157.08 kB
E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz
158.73 kB
E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz
155.24 kB
E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz
396.72 kB
HTSeq-count (CPM)
E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz
155.39 kB
E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz
159.00 kB
E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz
157.26 kB
E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz
397.08 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
156.71 kB
E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
395.52 kB
E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
154.70 kB
E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
157.68 kB
BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed.fastq.gz
769.17 kB
E95_STAU1_KD_80S.1_statistics.txt.gz
334 B
fastqc
Directory
E95_STAU1_KD_80S.2_preprocessed.fastq.gz
654.83 kB
STAR
E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai
1.51 MB
E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
1.50 MB
E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
1.88 MB
E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_P4-P8.1_preprocessed.bam
1.62 MB
E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab
13.55 kB
E95_STAU1_KD_P4-P8.1_preprocessed.bw
108.13 kB
STAR
E95_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
517.63 kB
E95_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
454.09 kB
E95_STAU1_rescue_80S.1_preprocessed.bam.bai
1.41 MB
E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab
9.60 kB
E95_STAU1_rescue_80S.1_preprocessed.bam
799.00 kB
E95_STAU1_rescue_80S.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_rescue_80S.1_preprocessed.bw
52.50 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz
1.80 MB
E95_STAU1_KD_P1-P3.1_statistics.txt.gz
415 B
E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz
2.23 MB
STAR
E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
1.17 MB
E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
964.45 kB
E95_STAU1_KD_tot.1_preprocessed.bam
1.03 MB
E95_STAU1_KD_tot.1_preprocessed.bam.bai
1.49 MB
E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab
10.66 kB
E95_STAU1_KD_tot.1_preprocessed.bw
80.40 kB
E95_STAU1_KD_tot.1_preprocessed_stats.txt
1.78 kB
BBDuk (paired-end)
E95_STAU1_rescue_P1-P3.1_statistics.txt.gz
442 B
fastqc
Directory
E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
2.13 MB
E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
2.46 MB
STAR
E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai
1.49 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
866.54 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bam
1.70 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab
13.59 kB
E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
791.87 kB
E96_STAU1_rescue_P1-P3.1_preprocessed.bw
82.12 kB
BBDuk (paired-end)
E96_STAU1_KD_80S.1_statistics.txt.gz
374 B
fastqc
Directory
E96_STAU1_KD_80S.1_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.2_preprocessed.fastq.gz
1004.74 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz
783.05 kB
E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz
643.48 kB
E96_STAU1_KD_P1-P3.1_statistics.txt.gz
368 B
STAR
E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai
1.51 MB
E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P4-P8.1_preprocessed.bw
102.95 kB
E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab
19.63 kB
E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz
1.34 MB
E96_STAU1_KD_P4-P8.1_preprocessed.bam
1.48 MB
E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate2.fastq.gz
1.07 MB
STAR
E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
448.45 kB
E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
484.80 kB
E96_STAU1_rescue_tot.1_preprocessed.bam
1.17 MB
E96_STAU1_rescue_tot.1_preprocessed.bam.bai
1.47 MB
E96_STAU1_rescue_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed.bw
69.54 kB
E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab
9.88 kB
BBDuk (paired-end)
E96_STAU1_rescue_80S.1_preprocessed.fastq.gz
583.53 kB
E96_STAU1_rescue_80S.1_statistics.txt.gz
355 B
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed.fastq.gz
580.34 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_statistics.txt.gz
454 B
E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
1.34 MB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz
1.75 MB
E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_statistics.txt.gz
445 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_tot.1_statistics.txt.gz
411 B
E96_STAU1_rescue_tot.2_preprocessed.fastq.gz
758.38 kB
E96_STAU1_rescue_tot.1_preprocessed.fastq.gz
794.83 kB
STAR
E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
508.61 kB
E95_STAU1_KD_80S.1_preprocessed.bam.bai
1.42 MB
E95_STAU1_KD_80S.1_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
609.49 kB
E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab
9.36 kB
E95_STAU1_KD_80S.1_preprocessed.bw
47.93 kB
E95_STAU1_KD_80S.1_preprocessed.bam
557.73 kB
FASTQ file (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.1.fastq.gz
62.32 MB
E95_STAU1_KD_P4-P8.2.fastq.gz
56.47 MB
E95_STAU1_KD_P4-P8.1_fastqc.zip
490.07 kB
E95_STAU1_KD_P4-P8.2_fastqc.zip
537.84 kB
stderr.txt
1.98 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz
1.95 MB
E95_STAU1_KD_P4-P8.1_statistics.txt.gz
383 B
E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz
2.39 MB
FASTQ file (paired-end)
fastqc
Directory
stderr.txt
1.98 kB
E96_STAU1_KD_P1-P3.1.fastq.gz
38.30 MB
E96_STAU1_KD_P1-P3.2.fastq.gz
35.05 MB
E96_STAU1_KD_P1-P3.1_fastqc.zip
483.96 kB
E96_STAU1_KD_P1-P3.2_fastqc.zip
539.32 kB
STAR
E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai
1.45 MB
E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate2.fastq.gz
498.42 kB
E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz
614.07 kB
E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab
12.21 kB
E96_STAU1_KD_P1-P3.1_preprocessed.bam
569.94 kB
E96_STAU1_KD_P1-P3.1_preprocessed.bw
58.33 kB
HTSeq-count (CPM)
E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz
157.43 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz
155.51 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz
398.29 kB
E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz
159.26 kB
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz
155.02 kB
E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz
396.57 kB
HTSeq-count (CPM)
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.95 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_rc.tab.gz
156.10 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_expressions.txt.gz
400.02 kB
E95_STAU1_rescue_P1-P3.1_preprocessed_preprocessed_cpm.tab.gz
160.76 kB
HTSeq-count (CPM)
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.88 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
399.49 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
156.15 kB
E95_STAU1_KD_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
160.17 kB
BBDuk (paired-end)
E96_STAU1_rescue_tot.1_preprocessed.fastq.gz
794.73 kB
E96_STAU1_rescue_tot.2_preprocessed.fastq.gz
758.50 kB
fastqc
Directory
E96_STAU1_rescue_tot.1_statistics.txt.gz
411 B
HTSeq-count (CPM)
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.12 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
396.88 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.26 kB
E95_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.19 kB
HTSeq-count (CPM)
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_HTseq_rc.txt.gz
156.03 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_cpm.tab.gz
156.17 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_rc.tab.gz
153.89 kB
E96_STAU1_rescue_80S.1_preprocessed_preprocessed_expressions.txt.gz
394.50 kB
BBDuk (paired-end)
E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz
1.34 MB
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_statistics.txt.gz
454 B
HTSeq-count (CPM)
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_cpm.tab.gz
158.34 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.20 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_rc.tab.gz
155.29 kB
E96_STAU1_rescue_P4-P8.1_preprocessed_preprocessed_expressions.txt.gz
397.03 kB
BBDuk (paired-end)
E96_STAU1_rescue_80S.1_preprocessed.fastq.gz
583.52 kB
fastqc
Directory
E96_STAU1_rescue_80S.2_preprocessed.fastq.gz
580.72 kB
E96_STAU1_rescue_80S.1_statistics.txt.gz
355 B
HTSeq-count (CPM)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_rc.tab.gz
155.01 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_cpm.tab.gz
158.03 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_HTseq_rc.txt.gz
157.02 kB
E96_STAU1_rescue_tot.1_preprocessed_preprocessed_expressions.txt.gz
396.58 kB
BBDuk (paired-end)
E95_STAU1_KD_80S.1_preprocessed_statistics.txt.gz
206 B
fastqc
Directory
E95_STAU1_KD_80S.1_preprocessed_preprocessed.fastq.gz
770.87 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed.fastq.gz
655.28 kB
BBDuk (paired-end)
fastqc
Directory
E95_STAU1_KD_tot.2_preprocessed_preprocessed.fastq.gz
1.22 MB
E95_STAU1_KD_tot.1_preprocessed_preprocessed.fastq.gz
1.48 MB
E95_STAU1_KD_tot.1_preprocessed_statistics.txt.gz
204 B
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P4-P8.1_statistics.txt.gz
425 B
E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz
941.89 kB
E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz
862.67 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_80S.2_preprocessed_preprocessed.fastq.gz
1005.29 kB
E96_STAU1_KD_80S.1_preprocessed_preprocessed.fastq.gz
1.13 MB
E96_STAU1_KD_80S.1_preprocessed_statistics.txt.gz
205 B
STAR
E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz
485.24 kB
E96_STAU1_rescue_tot.1_preprocessed.bam.bai
1.48 MB
E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate2.fastq.gz
448.60 kB
E96_STAU1_rescue_tot.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab
9.46 kB
E96_STAU1_rescue_tot.1_preprocessed.bam
1.18 MB
E96_STAU1_rescue_tot.1_preprocessed.bw
69.85 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_P1-P3.2_preprocessed_preprocessed.fastq.gz
644.23 kB
E96_STAU1_KD_P1-P3.1_preprocessed_statistics.txt.gz
206 B
E96_STAU1_KD_P1-P3.1_preprocessed_preprocessed.fastq.gz
784.38 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_rescue_P1-P3.2_preprocessed_preprocessed.fastq.gz
1.26 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_preprocessed.fastq.gz
1.34 MB
E96_STAU1_rescue_P1-P3.1_preprocessed_statistics.txt.gz
207 B
STAR
E96_STAU1_rescue_80S.1_preprocessed.bam.bai
1.42 MB
E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab
6.53 kB
E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate2.fastq.gz
368.27 kB
E96_STAU1_rescue_80S.1_preprocessed_stats.txt
1.78 kB
E96_STAU1_rescue_80S.1_preprocessed.bam
705.45 kB
E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz
381.29 kB
E96_STAU1_rescue_80S.1_preprocessed.bw
44.90 kB
BBDuk (paired-end)
E96_STAU1_KD_P4-P8.1_preprocessed_preprocessed.fastq.gz
1.76 MB
E96_STAU1_KD_P4-P8.2_preprocessed_preprocessed.fastq.gz
1.44 MB
E96_STAU1_KD_P4-P8.1_preprocessed_statistics.txt.gz
203 B
fastqc
Directory
BBDuk (paired-end)
E96_STAU1_rescue_tot.1_preprocessed_preprocessed.fastq.gz
796.02 kB
fastqc
Directory
E96_STAU1_rescue_tot.1_preprocessed_statistics.txt.gz
207 B
E96_STAU1_rescue_tot.2_preprocessed_preprocessed.fastq.gz
758.64 kB
BBDuk (paired-end)
fastqc
Directory
E96_STAU1_KD_tot.1_preprocessed_statistics.txt.gz
206 B
E96_STAU1_KD_tot.2_preprocessed_preprocessed.fastq.gz
1.18 MB
E96_STAU1_KD_tot.1_preprocessed_preprocessed.fastq.gz
1.41 MB
STAR
E95_STAU1_KD_80S.1_preprocessed_preprocessed_SJ.out.tab
9.13 kB
E95_STAU1_KD_80S.2_preprocessed_preprocessed_unmapped.out.mate2.fastq.gz
507.23 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bam
562.49 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_unmapped.out.mate1.fastq.gz
610.23 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bw
47.63 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed_stats.txt
1.78 kB
E95_STAU1_KD_80S.1_preprocessed_preprocessed.bam.bai
1.41 MB