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Folder iconSTAU1 KD GRASPS

Cristina Militti
Sept. 10, 2019

No Sample

FASTQ file (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_A.2.fastq.gz
42.58 MB
E145_1x_STAU1_KD_A.1.fastq.gz
48.18 MB
E145_1x_STAU1_KD_A.2_fastqc.zip
536.78 kB
stderr.txt
1.98 kB
E145_1x_STAU1_KD_A.1_fastqc.zip
490.19 kB
FASTQ file (paired-end)
stderr.txt
2.14 kB
fastqc
Directory
E145_1x_STAU1_rescue_B.2.fastq.gz
40.48 MB
E145_1x_STAU1_rescue_B.1.fastq.gz
45.94 MB
E145_1x_STAU1_rescue_B.1_fastqc.zip
487.74 kB
E145_1x_STAU1_rescue_B.2_fastqc.zip
540.31 kB
STAR
E145_1x_STAU1_KD_A.1_preprocessed_unmapped.out.mate1.fastq.gz
582.34 kB
E145_1x_STAU1_KD_A.2_preprocessed_unmapped.out.mate2.fastq.gz
462.76 kB
E145_1x_STAU1_KD_A.1_preprocessed.bam.bai
1.45 MB
E145_1x_STAU1_KD_A.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_KD_A.1_preprocessed.bam
437.33 kB
E145_1x_STAU1_KD_A.1_preprocessed_SJ.out.tab
6.47 kB
E145_1x_STAU1_KD_A.1_preprocessed.bw
53.37 kB
STAR
E145_1x_STAU1_rescue_A.1_preprocessed_unmapped.out.mate1.fastq.gz
547.00 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bam
509.35 kB
E145_1x_STAU1_rescue_A.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_rescue_A.2_preprocessed_unmapped.out.mate2.fastq.gz
434.79 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bw
55.82 kB
E145_1x_STAU1_rescue_A.1_preprocessed_SJ.out.tab
6.86 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bam.bai
1.45 MB
BBDuk (paired-end)
E145_4x_STAU1_rescue.1_preprocessed.fastq.gz
541.81 kB
fastqc
Directory
E145_4x_STAU1_rescue.2_preprocessed.fastq.gz
442.84 kB
E145_4x_STAU1_rescue.1_statistics.txt.gz
376 B
FASTQ file (paired-end)
fastqc
Directory
E145_4x_STAU1_rescue.2.fastq.gz
34.05 MB
E145_4x_STAU1_rescue.1.fastq.gz
38.37 MB
E145_4x_STAU1_rescue.1_fastqc.zip
484.96 kB
stderr.txt
2.06 kB
E145_4x_STAU1_rescue.2_fastqc.zip
536.70 kB
FASTQ file (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_B.1.fastq.gz
41.73 MB
E145_1x_STAU1_KD_B.2.fastq.gz
37.84 MB
E145_1x_STAU1_KD_B.1_fastqc.zip
486.48 kB
E145_1x_STAU1_KD_B.2_fastqc.zip
542.11 kB
stderr.txt
1.98 kB
FASTQ file (paired-end)
E145_1x_STAU1_rescue_A.1.fastq.gz
48.32 MB
fastqc
Directory
E145_1x_STAU1_rescue_A.2.fastq.gz
43.21 MB
stderr.txt
2.14 kB
E145_1x_STAU1_rescue_A.2_fastqc.zip
534.08 kB
E145_1x_STAU1_rescue_A.1_fastqc.zip
484.77 kB
FASTQ file (paired-end)
fastqc
Directory
E145_4x_STAU1_KD.2.fastq.gz
55.43 MB
E145_4x_STAU1_KD.1.fastq.gz
62.34 MB
stderr.txt
1.90 kB
E145_4x_STAU1_KD.2_fastqc.zip
544.48 kB
E145_4x_STAU1_KD.1_fastqc.zip
481.70 kB
BBDuk (paired-end)
E145_1x_STAU1_rescue_A.2_preprocessed.fastq.gz
570.42 kB
fastqc
Directory
E145_1x_STAU1_rescue_A.1_preprocessed.fastq.gz
701.15 kB
E145_1x_STAU1_rescue_A.1_statistics.txt.gz
377 B
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_A.2_preprocessed.fastq.gz
574.23 kB
E145_1x_STAU1_KD_A.1_preprocessed.fastq.gz
711.16 kB
E145_1x_STAU1_KD_A.1_statistics.txt.gz
383 B
HTSeq-count (CPM)
E145_4x_STAU1_rescue.1_preprocessed_rc.tab.gz
153.96 kB
E145_4x_STAU1_rescue.1_preprocessed_expressions.txt.gz
393.35 kB
E145_4x_STAU1_rescue.1_preprocessed_cpm.tab.gz
155.87 kB
E145_4x_STAU1_rescue.1_preprocessed_HTseq_rc.txt.gz
156.04 kB
HTSeq-count (CPM)
E145_4x_STAU1_KD.1_preprocessed_rc.tab.gz
154.37 kB
E145_4x_STAU1_KD.1_preprocessed_cpm.tab.gz
156.87 kB
E145_4x_STAU1_KD.1_preprocessed_expressions.txt.gz
394.69 kB
E145_4x_STAU1_KD.1_preprocessed_HTseq_rc.txt.gz
156.36 kB
HTSeq-count (CPM)
E145_1x_STAU1_rescue_B.1_preprocessed_HTseq_rc.txt.gz
156.17 kB
E145_1x_STAU1_rescue_B.1_preprocessed_rc.tab.gz
154.16 kB
E145_1x_STAU1_rescue_B.1_preprocessed_expressions.txt.gz
393.82 kB
E145_1x_STAU1_rescue_B.1_preprocessed_cpm.tab.gz
156.29 kB
BBDuk (paired-end)
fastqc
Directory
E145_4x_STAU1_KD.2_preprocessed.fastq.gz
791.75 kB
E145_4x_STAU1_KD.1_preprocessed.fastq.gz
992.60 kB
E145_4x_STAU1_KD.1_statistics.txt.gz
382 B
HTSeq-count (CPM)
E145_1x_STAU1_KD_B.1_preprocessed_HTseq_rc.txt.gz
156.34 kB
E145_1x_STAU1_KD_B.1_preprocessed_rc.tab.gz
154.40 kB
E145_1x_STAU1_KD_B.1_preprocessed_expressions.txt.gz
394.43 kB
E145_1x_STAU1_KD_B.1_preprocessed_cpm.tab.gz
156.84 kB
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_B.2_preprocessed.fastq.gz
746.87 kB
E145_1x_STAU1_KD_B.1_statistics.txt.gz
377 B
E145_1x_STAU1_KD_B.1_preprocessed.fastq.gz
916.53 kB
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_rescue_B.1_statistics.txt.gz
398 B
E145_1x_STAU1_rescue_B.2_preprocessed.fastq.gz
653.79 kB
E145_1x_STAU1_rescue_B.1_preprocessed.fastq.gz
823.54 kB
HTSeq-count (CPM)
E145_1x_STAU1_KD_A.1_preprocessed_HTseq_rc.txt.gz
156.03 kB
E145_1x_STAU1_KD_A.1_preprocessed_cpm.tab.gz
155.88 kB
E145_1x_STAU1_KD_A.1_preprocessed_rc.tab.gz
153.97 kB
E145_1x_STAU1_KD_A.1_preprocessed_expressions.txt.gz
393.22 kB
HTSeq-count (CPM)
E145_1x_STAU1_rescue_A.1_preprocessed_HTseq_rc.txt.gz
156.16 kB
E145_1x_STAU1_rescue_A.1_preprocessed_rc.tab.gz
154.11 kB
E145_1x_STAU1_rescue_A.1_preprocessed_cpm.tab.gz
156.22 kB
E145_1x_STAU1_rescue_A.1_preprocessed_expressions.txt.gz
393.68 kB
STAR
E145_4x_STAU1_KD.2_preprocessed_unmapped.out.mate2.fastq.gz
631.66 kB
E145_4x_STAU1_KD.1_preprocessed.bam
631.73 kB
E145_4x_STAU1_KD.1_preprocessed_unmapped.out.mate1.fastq.gz
802.97 kB
E145_4x_STAU1_KD.1_preprocessed.bam.bai
1.46 MB
E145_4x_STAU1_KD.1_preprocessed.bw
65.95 kB
E145_4x_STAU1_KD.1_preprocessed_stats.txt
1.78 kB
E145_4x_STAU1_KD.1_preprocessed_SJ.out.tab
9.72 kB
STAR
E145_4x_STAU1_rescue.2_preprocessed_unmapped.out.mate2.fastq.gz
327.18 kB
E145_4x_STAU1_rescue.1_preprocessed_unmapped.out.mate1.fastq.gz
414.42 kB
E145_4x_STAU1_rescue.1_preprocessed.bam
439.80 kB
E145_4x_STAU1_rescue.1_preprocessed.bam.bai
1.43 MB
E145_4x_STAU1_rescue.1_preprocessed_stats.txt
1.78 kB
E145_4x_STAU1_rescue.1_preprocessed_SJ.out.tab
6.71 kB
E145_4x_STAU1_rescue.1_preprocessed.bw
52.17 kB
STAR
E145_1x_STAU1_rescue_B.2_preprocessed_unmapped.out.mate2.fastq.gz
520.56 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bam.bai
1.47 MB
E145_1x_STAU1_rescue_B.1_preprocessed_unmapped.out.mate1.fastq.gz
665.68 kB
E145_1x_STAU1_rescue_B.1_preprocessed_SJ.out.tab
8.39 kB
E145_1x_STAU1_rescue_B.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bam
536.99 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bw
59.60 kB
STAR
E145_1x_STAU1_KD_B.1_preprocessed_unmapped.out.mate1.fastq.gz
720.77 kB
E145_1x_STAU1_KD_B.2_preprocessed_unmapped.out.mate2.fastq.gz
575.24 kB
E145_1x_STAU1_KD_B.1_preprocessed.bam.bai
1.45 MB
E145_1x_STAU1_KD_B.1_preprocessed.bam
636.89 kB
E145_1x_STAU1_KD_B.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_KD_B.1_preprocessed_SJ.out.tab
8.86 kB
E145_1x_STAU1_KD_B.1_preprocessed.bw
63.11 kB

E145_4x_STAU1_KD.1

FASTQ file (paired-end)
fastqc
Directory
E145_4x_STAU1_KD.2.fastq.gz
55.43 MB
E145_4x_STAU1_KD.1.fastq.gz
62.34 MB
stderr.txt
1.90 kB
E145_4x_STAU1_KD.2_fastqc.zip
544.48 kB
E145_4x_STAU1_KD.1_fastqc.zip
481.70 kB
HTSeq-count (CPM)
E145_4x_STAU1_KD.1_preprocessed_rc.tab.gz
154.37 kB
E145_4x_STAU1_KD.1_preprocessed_cpm.tab.gz
156.87 kB
E145_4x_STAU1_KD.1_preprocessed_expressions.txt.gz
394.69 kB
E145_4x_STAU1_KD.1_preprocessed_HTseq_rc.txt.gz
156.36 kB
BBDuk (paired-end)
fastqc
Directory
E145_4x_STAU1_KD.2_preprocessed.fastq.gz
791.75 kB
E145_4x_STAU1_KD.1_preprocessed.fastq.gz
992.60 kB
E145_4x_STAU1_KD.1_statistics.txt.gz
382 B
STAR
E145_4x_STAU1_KD.2_preprocessed_unmapped.out.mate2.fastq.gz
631.66 kB
E145_4x_STAU1_KD.1_preprocessed.bam
631.73 kB
E145_4x_STAU1_KD.1_preprocessed_unmapped.out.mate1.fastq.gz
802.97 kB
E145_4x_STAU1_KD.1_preprocessed.bam.bai
1.46 MB
E145_4x_STAU1_KD.1_preprocessed.bw
65.95 kB
E145_4x_STAU1_KD.1_preprocessed_stats.txt
1.78 kB
E145_4x_STAU1_KD.1_preprocessed_SJ.out.tab
9.72 kB

E145_1x_STAU1_KD_A.1

STAR
E145_1x_STAU1_KD_A.1_preprocessed_unmapped.out.mate1.fastq.gz
582.34 kB
E145_1x_STAU1_KD_A.2_preprocessed_unmapped.out.mate2.fastq.gz
462.76 kB
E145_1x_STAU1_KD_A.1_preprocessed.bam.bai
1.45 MB
E145_1x_STAU1_KD_A.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_KD_A.1_preprocessed.bam
437.33 kB
E145_1x_STAU1_KD_A.1_preprocessed_SJ.out.tab
6.47 kB
E145_1x_STAU1_KD_A.1_preprocessed.bw
53.37 kB
FASTQ file (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_A.2.fastq.gz
42.58 MB
E145_1x_STAU1_KD_A.1.fastq.gz
48.18 MB
E145_1x_STAU1_KD_A.2_fastqc.zip
536.78 kB
stderr.txt
1.98 kB
E145_1x_STAU1_KD_A.1_fastqc.zip
490.19 kB
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_A.2_preprocessed.fastq.gz
574.23 kB
E145_1x_STAU1_KD_A.1_preprocessed.fastq.gz
711.16 kB
E145_1x_STAU1_KD_A.1_statistics.txt.gz
383 B
HTSeq-count (CPM)
E145_1x_STAU1_KD_A.1_preprocessed_HTseq_rc.txt.gz
156.03 kB
E145_1x_STAU1_KD_A.1_preprocessed_cpm.tab.gz
155.88 kB
E145_1x_STAU1_KD_A.1_preprocessed_rc.tab.gz
153.97 kB
E145_1x_STAU1_KD_A.1_preprocessed_expressions.txt.gz
393.22 kB

E145_1x_STAU1_KD_B.1

FASTQ file (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_B.1.fastq.gz
41.73 MB
E145_1x_STAU1_KD_B.2.fastq.gz
37.84 MB
E145_1x_STAU1_KD_B.1_fastqc.zip
486.48 kB
E145_1x_STAU1_KD_B.2_fastqc.zip
542.11 kB
stderr.txt
1.98 kB
HTSeq-count (CPM)
E145_1x_STAU1_KD_B.1_preprocessed_HTseq_rc.txt.gz
156.34 kB
E145_1x_STAU1_KD_B.1_preprocessed_rc.tab.gz
154.40 kB
E145_1x_STAU1_KD_B.1_preprocessed_expressions.txt.gz
394.43 kB
E145_1x_STAU1_KD_B.1_preprocessed_cpm.tab.gz
156.84 kB
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_KD_B.2_preprocessed.fastq.gz
746.87 kB
E145_1x_STAU1_KD_B.1_statistics.txt.gz
377 B
E145_1x_STAU1_KD_B.1_preprocessed.fastq.gz
916.53 kB
STAR
E145_1x_STAU1_KD_B.1_preprocessed_unmapped.out.mate1.fastq.gz
720.77 kB
E145_1x_STAU1_KD_B.2_preprocessed_unmapped.out.mate2.fastq.gz
575.24 kB
E145_1x_STAU1_KD_B.1_preprocessed.bam.bai
1.45 MB
E145_1x_STAU1_KD_B.1_preprocessed.bam
636.89 kB
E145_1x_STAU1_KD_B.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_KD_B.1_preprocessed_SJ.out.tab
8.86 kB
E145_1x_STAU1_KD_B.1_preprocessed.bw
63.11 kB

E145_4x_STAU1_rescue.1

BBDuk (paired-end)
E145_4x_STAU1_rescue.1_preprocessed.fastq.gz
541.81 kB
fastqc
Directory
E145_4x_STAU1_rescue.2_preprocessed.fastq.gz
442.84 kB
E145_4x_STAU1_rescue.1_statistics.txt.gz
376 B
FASTQ file (paired-end)
fastqc
Directory
E145_4x_STAU1_rescue.2.fastq.gz
34.05 MB
E145_4x_STAU1_rescue.1.fastq.gz
38.37 MB
E145_4x_STAU1_rescue.1_fastqc.zip
484.96 kB
stderr.txt
2.06 kB
E145_4x_STAU1_rescue.2_fastqc.zip
536.70 kB
HTSeq-count (CPM)
E145_4x_STAU1_rescue.1_preprocessed_rc.tab.gz
153.96 kB
E145_4x_STAU1_rescue.1_preprocessed_expressions.txt.gz
393.35 kB
E145_4x_STAU1_rescue.1_preprocessed_cpm.tab.gz
155.87 kB
E145_4x_STAU1_rescue.1_preprocessed_HTseq_rc.txt.gz
156.04 kB
STAR
E145_4x_STAU1_rescue.2_preprocessed_unmapped.out.mate2.fastq.gz
327.18 kB
E145_4x_STAU1_rescue.1_preprocessed_unmapped.out.mate1.fastq.gz
414.42 kB
E145_4x_STAU1_rescue.1_preprocessed.bam
439.80 kB
E145_4x_STAU1_rescue.1_preprocessed.bam.bai
1.43 MB
E145_4x_STAU1_rescue.1_preprocessed_stats.txt
1.78 kB
E145_4x_STAU1_rescue.1_preprocessed_SJ.out.tab
6.71 kB
E145_4x_STAU1_rescue.1_preprocessed.bw
52.17 kB

E145_1x_STAU1_rescue_B.1

FASTQ file (paired-end)
fastqc
Directory
E145_1x_STAU1_rescue_B.2.fastq.gz
40.48 MB
E145_1x_STAU1_rescue_B.1.fastq.gz
45.94 MB
E145_1x_STAU1_rescue_B.1_fastqc.zip
487.74 kB
E145_1x_STAU1_rescue_B.2_fastqc.zip
540.31 kB
stderr.txt
2.14 kB
HTSeq-count (CPM)
E145_1x_STAU1_rescue_B.1_preprocessed_HTseq_rc.txt.gz
156.17 kB
E145_1x_STAU1_rescue_B.1_preprocessed_rc.tab.gz
154.16 kB
E145_1x_STAU1_rescue_B.1_preprocessed_expressions.txt.gz
393.82 kB
E145_1x_STAU1_rescue_B.1_preprocessed_cpm.tab.gz
156.29 kB
BBDuk (paired-end)
fastqc
Directory
E145_1x_STAU1_rescue_B.1_statistics.txt.gz
398 B
E145_1x_STAU1_rescue_B.2_preprocessed.fastq.gz
653.79 kB
E145_1x_STAU1_rescue_B.1_preprocessed.fastq.gz
823.54 kB
STAR
E145_1x_STAU1_rescue_B.2_preprocessed_unmapped.out.mate2.fastq.gz
520.56 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bam.bai
1.47 MB
E145_1x_STAU1_rescue_B.1_preprocessed_unmapped.out.mate1.fastq.gz
665.68 kB
E145_1x_STAU1_rescue_B.1_preprocessed_SJ.out.tab
8.39 kB
E145_1x_STAU1_rescue_B.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bam
536.99 kB
E145_1x_STAU1_rescue_B.1_preprocessed.bw
59.60 kB

E145_1x_STAU1_rescue_A.1

STAR
E145_1x_STAU1_rescue_A.1_preprocessed_unmapped.out.mate1.fastq.gz
547.00 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bam
509.35 kB
E145_1x_STAU1_rescue_A.1_preprocessed_stats.txt
1.78 kB
E145_1x_STAU1_rescue_A.2_preprocessed_unmapped.out.mate2.fastq.gz
434.79 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bw
55.82 kB
E145_1x_STAU1_rescue_A.1_preprocessed_SJ.out.tab
6.86 kB
E145_1x_STAU1_rescue_A.1_preprocessed.bam.bai
1.45 MB
FASTQ file (paired-end)
E145_1x_STAU1_rescue_A.1.fastq.gz
48.32 MB
fastqc
Directory
E145_1x_STAU1_rescue_A.2.fastq.gz
43.21 MB
stderr.txt
2.14 kB
E145_1x_STAU1_rescue_A.2_fastqc.zip
534.08 kB
E145_1x_STAU1_rescue_A.1_fastqc.zip
484.77 kB
BBDuk (paired-end)
E145_1x_STAU1_rescue_A.2_preprocessed.fastq.gz
570.42 kB
fastqc
Directory
E145_1x_STAU1_rescue_A.1_preprocessed.fastq.gz
701.15 kB
E145_1x_STAU1_rescue_A.1_statistics.txt.gz
377 B
HTSeq-count (CPM)
E145_1x_STAU1_rescue_A.1_preprocessed_HTseq_rc.txt.gz
156.16 kB
E145_1x_STAU1_rescue_A.1_preprocessed_rc.tab.gz
154.11 kB
E145_1x_STAU1_rescue_A.1_preprocessed_cpm.tab.gz
156.22 kB
E145_1x_STAU1_rescue_A.1_preprocessed_expressions.txt.gz
393.68 kB