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Folder iconBacterial miCLIP

Igor Ruiz de los Mozos
June 6, 2019

No Sample

iCount RNA-maps
results.tar.gz
169.72 kB
Paraclu
peaks.bed.gz
205 B
FASTQ file (single-end)
fastqc
Directory
demux_nomatch_fastqc.zip
590.23 kB
demux_nomatch.fastq.gz
49.15 MB
stderr.txt
875 B
iCount summary
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
264 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
462 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
24.38 kB
iCount RNA-maps
results.tar.gz
158.47 kB
iCount RNA-maps
results.tar.gz
126.59 kB
FASTQ file (single-end)
m6a-s-aureus-0-8-20180416-ju.fastq.gz
3.98 MB
fastqc
Directory
m6a-s-aureus-0-8-20180416-ju_fastqc.zip
484.55 kB
stderr.txt
1.15 kB
FASTQ file (single-end)
fastqc
Directory
m6a-s-aureus-1-5-20180416-ju.fastq.gz
43.04 MB
m6a-s-aureus-1-5-20180416-ju_fastqc.zip
419.50 kB
stderr.txt
1.15 kB
FASTQ file (single-end)
m6a-e-coli-0-8-20180416-ju_fastqc.zip
445.05 kB
fastqc
Directory
m6a-e-coli-0-8-20180416-ju.fastq.gz
37.97 MB
stderr.txt
1.11 kB
FASTQ file (single-end)
m6a-e-coli-1-5-20180416-ju.fastq.gz
52.29 MB
fastqc
Directory
stderr.txt
1.11 kB
m6a-e-coli-1-5-20180416-ju_fastqc.zip
431.66 kB
FASTQ file (single-end)
igg-e-coli-mix-aureus-and-coli-20180416-ju.fastq.gz
13.66 MB
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-ju_fastqc.zip
462.31 kB
stderr.txt
1.42 kB
FASTQ file (single-end)
stderr.txt
1.15 kB
fastqc
Directory
m1a-s-aureus-0-8-20180416-ju_fastqc.zip
551.93 kB
m1a-s-aureus-0-8-20180416-ju.fastq.gz
107.26 MB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.15 kB
m1a-s-aureus-1-5-20180416-ju_fastqc.zip
547.38 kB
m1a-s-aureus-1-5-20180416-ju.fastq.gz
10.81 MB
FASTQ file (single-end)
fastqc
Directory
m1a-e-coli-0-8-20180416-ju_fastqc.zip
511.56 kB
stderr.txt
1.11 kB
m1a-e-coli-0-8-20180416-ju.fastq.gz
164.68 MB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.11 kB
m1a-e-coli-1-5-20180416-ju.fastq.gz
76.00 MB
m1a-e-coli-1-5-20180416-ju_fastqc.zip
537.96 kB
FASTQ file (single-end)
igg-e-coli-1-5-mix-20180416-ju.fastq.gz
116.39 MB
fastqc
Directory
stderr.txt
1.19 kB
igg-e-coli-1-5-mix-20180416-ju_fastqc.zip
460.31 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
698 B
igg-e-coli-1-5-mix-20180416-ju_trimmed_fastqc.zip
470.99 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed.fastq.gz
108.00 MB
STAR
igg-e-coli-1-5-mix-20180416-ju_trimmed.bam
135.79 MB
igg-e-coli-1-5-mix-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
15.21 MB
igg-e-coli-1-5-mix-20180416-ju_trimmed.bam.bai
4.31 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_stats.txt
1.78 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-1-5-mix-20180416-ju_trimmed_singleAndMulti.bed.gz
36.58 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_single.bed.gz
33.36 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_reads_single.bed.gz
40.11 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_single.bedgraph
322.22 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_skipped.bam
1.37 kB
iCount reads proxy
stderr.txt
1.56 kB
fastqc
Directory
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_fastqc.zip
528.79 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.fastq.gz
15.21 MB
iCount xlsites
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_skipped.bam
460 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single.bed.gz
20.92 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_reads_single.bed.gz
25.48 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
52.21 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single.bedgraph
100.10 kB
iCount summary
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
593 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_type.tsv
321 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_gene.tsv
72.86 kB
Paraclu
peaks.bed.gz
360 B
K-mers
positional_distribution_genome.tsv
154.77 kB
kmer_frequency_genome.tsv
5.20 kB
genome region.png
253.19 kB
Cutadapt (single-end)
fastqc
Directory
m1a-e-coli-1-5-20180416-ju_trimmed.fastq.gz
75.72 MB
report.txt
693 B
m1a-e-coli-1-5-20180416-ju_trimmed_fastqc.zip
537.19 kB
STAR
m1a-e-coli-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
5.04 MB
m1a-e-coli-1-5-20180416-ju_trimmed.bam
96.26 MB
m1a-e-coli-1-5-20180416-ju_trimmed.bw
25.26 kB
m1a-e-coli-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-e-coli-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-e-coli-1-5-20180416-ju_trimmed.bam.bai
4.31 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.fastq.gz
5.04 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_fastqc.zip
582.38 kB
STAR
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
2.67 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bam
8.06 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bw
13.48 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bam.bai
8.52 kB
iCount xlsites
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
12.19 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bed.gz
4.76 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bedgraph
21.09 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_skipped.bam
460 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
5.79 kB
iCount summary
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
262 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
22.32 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
519 B
K-mers
kmer_frequency_genome.tsv
3.54 kB
positional_distribution_genome.tsv
121.88 kB
genome region.png
206.87 kB
Cutadapt (single-end)
report.txt
693 B
m1a-e-coli-0-8-20180416-ju_trimmed_fastqc.zip
512.73 kB
fastqc
Directory
m1a-e-coli-0-8-20180416-ju_trimmed.fastq.gz
166.58 MB
STAR
m1a-e-coli-0-8-20180416-ju_trimmed.bam.bai
4.31 kB
m1a-e-coli-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
18.77 MB
m1a-e-coli-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-e-coli-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-e-coli-0-8-20180416-ju_trimmed.bam
244.31 MB
iCount xlsites
m1a-e-coli-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
45.78 kB
m1a-e-coli-0-8-20180416-ju_trimmed_single.bed.gz
40.17 kB
m1a-e-coli-0-8-20180416-ju_trimmed_skipped.bam
1.37 kB
m1a-e-coli-0-8-20180416-ju_trimmed_reads_single.bed.gz
46.19 kB
m1a-e-coli-0-8-20180416-ju_trimmed_single.bedgraph
412.55 kB
iCount reads proxy
fastqc
Directory
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.fastq.gz
18.77 MB
stderr.txt
1.55 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_fastqc.zip
523.60 kB
STAR
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
11.28 MB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bam
32.85 MB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bam.bai
7.66 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bw
109.07 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
39 B
iCount xlsites
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bed.gz
51.95 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_skipped.bam
460 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
61.25 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
121.11 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bedgraph
258.95 kB
iCount summary
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
601 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
329 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
132.72 kB
iCount RNA-maps
results.tar.gz
250.32 kB
Paraclu
peaks.bed.gz
1.21 kB
K-mers
positional_distribution_genome.tsv
295.58 kB
kmer_frequency_genome.tsv
5.96 kB
genome region.png
266.73 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m1a-s-aureus-1-5-20180416-ju_trimmed.fastq.gz
3.70 MB
m1a-s-aureus-1-5-20180416-ju_trimmed_fastqc.zip
605.14 kB
STAR
m1a-s-aureus-1-5-20180416-ju_trimmed.bam
6.91 MB
m1a-s-aureus-1-5-20180416-ju_trimmed.bam.bai
3.41 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
883.42 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-s-aureus-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-s-aureus-1-5-20180416-ju_trimmed.bw
12.33 kB
iCount xlsites
m1a-s-aureus-1-5-20180416-ju_trimmed_skipped.bam
1.17 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
3.19 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_single.bed.gz
1.78 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_single.bedgraph
12.83 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_reads_single.bed.gz
2.21 kB
iCount reads proxy
fastqc
Directory
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.fastq.gz
883.42 kB
stderr.txt
1.52 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_fastqc.zip
674.27 kB
STAR
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam.bai
5.16 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
744.13 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bw
6.79 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam
1.61 MB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_skipped.bam
457 B
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
5.05 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
1.51 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bedgraph
5.77 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bed.gz
1.39 kB
iCount summary
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
252 B
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
4.89 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
264 B
iCount RNA-maps
results.tar.gz
102.71 kB
Paraclu
peaks.bed.gz
35 B
Cutadapt (single-end)
report.txt
695 B
m1a-s-aureus-0-8-20180416-ju_trimmed.fastq.gz
106.48 MB
fastqc
Directory
m1a-s-aureus-0-8-20180416-ju_trimmed_fastqc.zip
544.36 kB
STAR
m1a-s-aureus-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
16.90 MB
m1a-s-aureus-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-s-aureus-0-8-20180416-ju_trimmed.bam.bai
3.77 kB
m1a-s-aureus-0-8-20180416-ju_trimmed.bam
218.49 MB
m1a-s-aureus-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
m1a-s-aureus-0-8-20180416-ju_trimmed_single.bed.gz
19.91 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
25.76 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_skipped.bam
1.17 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_reads_single.bed.gz
24.02 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_single.bedgraph
145.24 kB
iCount reads proxy
fastqc
Directory
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.fastq.gz
16.90 MB
stderr.txt
1.52 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_fastqc.zip
535.96 kB
STAR
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam
33.19 MB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
12.69 MB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam.bai
5.34 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bw
22.92 kB
iCount xlsites
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_skipped.bam
457 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bed.gz
7.56 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
24.29 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bedgraph
34.46 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
8.76 kB
iCount RNA-maps
results.tar.gz
160.46 kB
Paraclu
peaks.bed.gz
303 B
K-mers
kmer_frequency_genome.tsv
4.38 kB
positional_distribution_genome.tsv
139.55 kB
genome region.png
212.23 kB
Cutadapt (single-end)
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_fastqc.zip
505.36 kB
report.txt
708 B
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.fastq.gz
6.28 MB
STAR
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
1.22 MB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_stats.txt
1.78 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bw
25.13 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bam.bai
4.24 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bam
7.24 MB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_singleAndMulti.bed.gz
17.30 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_skipped.bam
1.37 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_reads_single.bed.gz
19.21 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_single.bedgraph
133.74 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_single.bed.gz
16.25 kB
iCount reads proxy
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.fastq.gz
1.22 MB
stderr.txt
1.79 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_fastqc.zip
603.76 kB
STAR
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
857.98 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bam
2.06 MB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bam.bai
8.02 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bw
9.79 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_skipped.bam
460 B
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single.bed.gz
2.55 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_reads_single.bed.gz
3.05 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
7.82 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single.bedgraph
11.06 kB
iCount summary
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_type.tsv
313 B
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_gene.tsv
13.07 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
570 B
Paraclu
peaks.bed.gz
88 B
K-mers
genome region.png
113.13 kB
positional_distribution_genome.tsv
33.52 kB
kmer_frequency_genome.tsv
449 B
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m6a-e-coli-1-5-20180416-ju_trimmed.fastq.gz
49.91 MB
m6a-e-coli-1-5-20180416-ju_trimmed_fastqc.zip
445.30 kB
iCount xlsites
m6a-e-coli-1-5-20180416-ju_trimmed_skipped.bam
1.37 kB
m6a-e-coli-1-5-20180416-ju_trimmed_reads_single.bed.gz
41.17 kB
m6a-e-coli-1-5-20180416-ju_trimmed_single.bed.gz
38.94 kB
m6a-e-coli-1-5-20180416-ju_trimmed_single.bedgraph
375.12 kB
m6a-e-coli-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
43.10 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.55 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.fastq.gz
5.08 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_fastqc.zip
494.33 kB
STAR
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bam
9.77 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bam.bai
6.73 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
3.44 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bw
93.90 kB
iCount xlsites
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bed.gz
56.72 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
112.60 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bedgraph
290.91 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
63.35 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_skipped.bam
460 B
iCount summary
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
591 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
324 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
131.44 kB
iCount RNA-maps
results.tar.gz
295.38 kB
Paraclu
peaks.bed.gz
838 B
K-mers
kmer_frequency_genome.tsv
6.02 kB
genome region.png
230.37 kB
positional_distribution_genome.tsv
243.47 kB
Cutadapt (single-end)
fastqc
Directory
m6a-e-coli-0-8-20180416-ju_trimmed.fastq.gz
36.07 MB
report.txt
694 B
m6a-e-coli-0-8-20180416-ju_trimmed_fastqc.zip
455.39 kB
iCount xlsites
m6a-e-coli-0-8-20180416-ju_trimmed_single.bed.gz
22.64 kB
m6a-e-coli-0-8-20180416-ju_trimmed_skipped.bam
1.37 kB
m6a-e-coli-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
24.24 kB
m6a-e-coli-0-8-20180416-ju_trimmed_reads_single.bed.gz
26.96 kB
m6a-e-coli-0-8-20180416-ju_trimmed_single.bedgraph
177.78 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.fastq.gz
3.30 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_fastqc.zip
530.21 kB
STAR
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
1.75 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bam.bai
8.55 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bam
5.40 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bw
23.95 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_skipped.bam
460 B
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bed.gz
7.07 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
8.54 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bedgraph
32.12 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
20.78 kB
iCount summary
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
32.43 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
263 B
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
522 B
iCount RNA-maps
results.tar.gz
199.02 kB
Paraclu
peaks.bed.gz
139 B
K-mers
positional_distribution_genome.tsv
108.10 kB
kmer_frequency_genome.tsv
2.43 kB
genome region.png
194.26 kB
STAR
m6a-s-aureus-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
6.44 MB
m6a-s-aureus-1-5-20180416-ju_trimmed.bam
52.66 MB
m6a-s-aureus-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-s-aureus-1-5-20180416-ju_trimmed.bam.bai
3.77 kB
m6a-s-aureus-1-5-20180416-ju_trimmed.bw
12.57 kB
iCount xlsites
m6a-s-aureus-1-5-20180416-ju_trimmed_skipped.bam
1.17 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_single.bed.gz
29.49 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
33.92 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_reads_single.bed.gz
33.47 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_single.bedgraph
184.28 kB
iCount reads proxy
fastqc
Directory
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.fastq.gz
6.44 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_fastqc.zip
518.17 kB
stderr.txt
1.52 kB
STAR
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
3.24 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam.bai
4.44 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam
20.74 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bw
35.03 kB
iCount xlsites
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_skipped.bam
457 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
47.01 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bed.gz
21.76 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
25.77 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bedgraph
109.82 kB
iCount summary
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
526 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
263 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
51.48 kB
iCount RNA-maps
results.tar.gz
234.77 kB
Paraclu
peaks.bed.gz
425 B
K-mers
kmer_frequency_genome.tsv
4.93 kB
genome region.png
273.03 kB
positional_distribution_genome.tsv
157.87 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
695 B
m6a-s-aureus-0-8-20180416-ju_trimmed_fastqc.zip
508.23 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.fastq.gz
3.91 MB
STAR
m6a-s-aureus-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
782.98 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.bam.bai
3.62 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.bw
12.43 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-s-aureus-0-8-20180416-ju_trimmed.bam
4.47 MB
iCount xlsites
m6a-s-aureus-0-8-20180416-ju_trimmed_reads_single.bed.gz
10.95 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
9.69 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_single.bed.gz
8.93 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_single.bedgraph
44.71 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_skipped.bam
1.17 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.52 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.fastq.gz
782.98 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_fastqc.zip
620.23 kB
STAR
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
401.31 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam
2.14 MB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bw
5.59 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam.bai
4.52 kB
iCount xlsites
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bed.gz
1.51 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_skipped.bam
457 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
6.36 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
1.83 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bedgraph
6.58 kB
iCount summary
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
327 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
6.43 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
256 B
Paraclu
peaks.bed.gz
67 B
K-mers
positional_distribution_genome.tsv
36.27 kB
kmer_frequency_genome.tsv
446 B
genome region.png
111.77 kB
Upload iCount sample annotation
Bacterial_annotation_June_2019.tab.gz
835 B
Bacterial_annotation_June_2019.xlsx
19.26 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
695 B
iCount RNA-maps
results.tar.gz
251.83 kB
STAR
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
9.01 MB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bam
26.10 MB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bw
53.36 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bam.bai
8.23 kB
Cutadapt (single-end)
m6a-s-aureus-1-5-20180416-ju_trimmed.fastq.gz
38.37 MB
report.txt
696 B
fastqc
Directory
m6a-s-aureus-1-5-20180416-ju_trimmed_fastqc.zip
442.13 kB
iCount xlsites
m1a-e-coli-1-5-20180416-ju_trimmed_reads_single.bed.gz
29.81 kB
m1a-e-coli-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
26.81 kB
m1a-e-coli-1-5-20180416-ju_trimmed_skipped.bam
1.37 kB
m1a-e-coli-1-5-20180416-ju_trimmed_single.bedgraph
235.68 kB
m1a-e-coli-1-5-20180416-ju_trimmed_single.bed.gz
24.60 kB
STAR
m6a-e-coli-1-5-20180416-ju_trimmed.bam
77.84 MB
m6a-e-coli-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
5.08 MB
m6a-e-coli-1-5-20180416-ju_trimmed.bam.bai
4.31 kB
m6a-e-coli-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-e-coli-1-5-20180416-ju_trimmed.bw
25.23 kB
m6a-e-coli-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
STAR
m6a-e-coli-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
3.30 MB
m6a-e-coli-0-8-20180416-ju_trimmed.bam.bai
4.31 kB
m6a-e-coli-0-8-20180416-ju_trimmed.bam
44.54 MB
m6a-e-coli-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-e-coli-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-e-coli-0-8-20180416-ju_trimmed.bw
25.22 kB

m6A_S. aureus_ 0.8_20180416_JU

iCount RNA-maps
results.tar.gz
126.59 kB
FASTQ file (single-end)
m6a-s-aureus-0-8-20180416-ju.fastq.gz
3.98 MB
fastqc
Directory
m6a-s-aureus-0-8-20180416-ju_fastqc.zip
484.55 kB
stderr.txt
1.15 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
695 B
m6a-s-aureus-0-8-20180416-ju_trimmed_fastqc.zip
508.23 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.fastq.gz
3.91 MB
STAR
m6a-s-aureus-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
782.98 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.bam.bai
3.62 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-s-aureus-0-8-20180416-ju_trimmed.bw
12.43 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-s-aureus-0-8-20180416-ju_trimmed.bam
4.47 MB
iCount xlsites
m6a-s-aureus-0-8-20180416-ju_trimmed_reads_single.bed.gz
10.95 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
9.69 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_single.bed.gz
8.93 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_single.bedgraph
44.71 kB
m6a-s-aureus-0-8-20180416-ju_trimmed_skipped.bam
1.17 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.52 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.fastq.gz
782.98 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_fastqc.zip
620.23 kB
STAR
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
401.31 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam
2.14 MB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bw
5.59 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam.bai
4.52 kB
iCount xlsites
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bed.gz
1.51 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_skipped.bam
457 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
6.36 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
1.83 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bedgraph
6.58 kB
iCount summary
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
327 B
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
6.43 kB
m6a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
256 B
Paraclu
peaks.bed.gz
67 B
K-mers
positional_distribution_genome.tsv
36.27 kB
kmer_frequency_genome.tsv
446 B
genome region.png
111.77 kB

m6A_S. aureus_ 1.5_20180416_JU

FASTQ file (single-end)
fastqc
Directory
m6a-s-aureus-1-5-20180416-ju.fastq.gz
43.04 MB
m6a-s-aureus-1-5-20180416-ju_fastqc.zip
419.50 kB
stderr.txt
1.15 kB
STAR
m6a-s-aureus-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
6.44 MB
m6a-s-aureus-1-5-20180416-ju_trimmed.bam
52.66 MB
m6a-s-aureus-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-s-aureus-1-5-20180416-ju_trimmed.bam.bai
3.77 kB
m6a-s-aureus-1-5-20180416-ju_trimmed.bw
12.57 kB
iCount xlsites
m6a-s-aureus-1-5-20180416-ju_trimmed_skipped.bam
1.17 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_single.bed.gz
29.49 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
33.92 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_reads_single.bed.gz
33.47 kB
m6a-s-aureus-1-5-20180416-ju_trimmed_single.bedgraph
184.28 kB
iCount reads proxy
fastqc
Directory
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.fastq.gz
6.44 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_fastqc.zip
518.17 kB
stderr.txt
1.52 kB
STAR
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
3.24 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam.bai
4.44 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam
20.74 MB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped.bw
35.03 kB
iCount xlsites
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_skipped.bam
457 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
47.01 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bed.gz
21.76 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
25.77 kB
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bedgraph
109.82 kB
iCount summary
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
526 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
263 B
m6a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
51.48 kB
iCount RNA-maps
results.tar.gz
234.77 kB
Paraclu
peaks.bed.gz
425 B
K-mers
kmer_frequency_genome.tsv
4.93 kB
genome region.png
273.03 kB
positional_distribution_genome.tsv
157.87 kB
Cutadapt (single-end)
m6a-s-aureus-1-5-20180416-ju_trimmed.fastq.gz
38.37 MB
report.txt
696 B
fastqc
Directory
m6a-s-aureus-1-5-20180416-ju_trimmed_fastqc.zip
442.13 kB

IgG_E. coli_mix aureus and coli_20180416_JU

iCount RNA-maps
results.tar.gz
158.47 kB
FASTQ file (single-end)
igg-e-coli-mix-aureus-and-coli-20180416-ju.fastq.gz
13.66 MB
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-ju_fastqc.zip
462.31 kB
stderr.txt
1.42 kB
Cutadapt (single-end)
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_fastqc.zip
505.36 kB
report.txt
708 B
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.fastq.gz
6.28 MB
STAR
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
1.22 MB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_stats.txt
1.78 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bw
25.13 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bam.bai
4.24 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed.bam
7.24 MB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_singleAndMulti.bed.gz
17.30 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_skipped.bam
1.37 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_reads_single.bed.gz
19.21 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_single.bedgraph
133.74 kB
igg-e-coli-mix-aureus-and-coli-20180416-ju_trimmed_single.bed.gz
16.25 kB
iCount reads proxy
fastqc
Directory
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.fastq.gz
1.22 MB
stderr.txt
1.79 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_fastqc.zip
603.76 kB
STAR
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
857.98 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bam
2.06 MB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bam.bai
8.02 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped.bw
9.79 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_skipped.bam
460 B
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single.bed.gz
2.55 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_reads_single.bed.gz
3.05 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
7.82 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single.bedgraph
11.06 kB
iCount summary
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_type.tsv
313 B
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_gene.tsv
13.07 kB
igg-e-coli-mix-aureus-and-coli-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
570 B
Paraclu
peaks.bed.gz
88 B
K-mers
genome region.png
113.13 kB
positional_distribution_genome.tsv
33.52 kB
kmer_frequency_genome.tsv
449 B

m1A_E. coli_0.8_20180416_JU

FASTQ file (single-end)
fastqc
Directory
m1a-e-coli-0-8-20180416-ju_fastqc.zip
511.56 kB
stderr.txt
1.11 kB
m1a-e-coli-0-8-20180416-ju.fastq.gz
164.68 MB
Cutadapt (single-end)
report.txt
693 B
m1a-e-coli-0-8-20180416-ju_trimmed_fastqc.zip
512.73 kB
fastqc
Directory
m1a-e-coli-0-8-20180416-ju_trimmed.fastq.gz
166.58 MB
STAR
m1a-e-coli-0-8-20180416-ju_trimmed.bam.bai
4.31 kB
m1a-e-coli-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
18.77 MB
m1a-e-coli-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-e-coli-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-e-coli-0-8-20180416-ju_trimmed.bam
244.31 MB
iCount xlsites
m1a-e-coli-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
45.78 kB
m1a-e-coli-0-8-20180416-ju_trimmed_single.bed.gz
40.17 kB
m1a-e-coli-0-8-20180416-ju_trimmed_skipped.bam
1.37 kB
m1a-e-coli-0-8-20180416-ju_trimmed_reads_single.bed.gz
46.19 kB
m1a-e-coli-0-8-20180416-ju_trimmed_single.bedgraph
412.55 kB
iCount reads proxy
fastqc
Directory
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.fastq.gz
18.77 MB
stderr.txt
1.55 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_fastqc.zip
523.60 kB
STAR
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
11.28 MB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bam
32.85 MB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bam.bai
7.66 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped.bw
109.07 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
39 B
iCount xlsites
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bed.gz
51.95 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_skipped.bam
460 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
61.25 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
121.11 kB
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bedgraph
258.95 kB
iCount summary
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
601 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
329 B
m1a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
132.72 kB
iCount RNA-maps
results.tar.gz
250.32 kB
Paraclu
peaks.bed.gz
1.21 kB
K-mers
positional_distribution_genome.tsv
295.58 kB
kmer_frequency_genome.tsv
5.96 kB
genome region.png
266.73 kB

m6A_E. coli_1.5_20180416_JU

FASTQ file (single-end)
fastqc
Directory
m6a-e-coli-1-5-20180416-ju.fastq.gz
52.29 MB
stderr.txt
1.11 kB
m6a-e-coli-1-5-20180416-ju_fastqc.zip
431.66 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m6a-e-coli-1-5-20180416-ju_trimmed.fastq.gz
49.91 MB
m6a-e-coli-1-5-20180416-ju_trimmed_fastqc.zip
445.30 kB
iCount xlsites
m6a-e-coli-1-5-20180416-ju_trimmed_skipped.bam
1.37 kB
m6a-e-coli-1-5-20180416-ju_trimmed_reads_single.bed.gz
41.17 kB
m6a-e-coli-1-5-20180416-ju_trimmed_single.bed.gz
38.94 kB
m6a-e-coli-1-5-20180416-ju_trimmed_single.bedgraph
375.12 kB
m6a-e-coli-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
43.10 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.55 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.fastq.gz
5.08 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_fastqc.zip
494.33 kB
STAR
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bam
9.77 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bam.bai
6.73 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
3.44 MB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped.bw
93.90 kB
iCount xlsites
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bed.gz
56.72 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
112.60 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bedgraph
290.91 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
63.35 kB
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_skipped.bam
460 B
iCount summary
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
591 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
324 B
m6a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
131.44 kB
iCount RNA-maps
results.tar.gz
295.38 kB
Paraclu
peaks.bed.gz
838 B
K-mers
kmer_frequency_genome.tsv
6.02 kB
genome region.png
230.37 kB
positional_distribution_genome.tsv
243.47 kB
STAR
m6a-e-coli-1-5-20180416-ju_trimmed.bam
77.84 MB
m6a-e-coli-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
5.08 MB
m6a-e-coli-1-5-20180416-ju_trimmed.bam.bai
4.31 kB
m6a-e-coli-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-e-coli-1-5-20180416-ju_trimmed.bw
25.23 kB
m6a-e-coli-1-5-20180416-ju_trimmed_SJ.out.tab
0 B

IgG_E. coli_1.5_mix_20180416_JU

FASTQ file (single-end)
igg-e-coli-1-5-mix-20180416-ju.fastq.gz
116.39 MB
fastqc
Directory
stderr.txt
1.19 kB
igg-e-coli-1-5-mix-20180416-ju_fastqc.zip
460.31 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
698 B
igg-e-coli-1-5-mix-20180416-ju_trimmed_fastqc.zip
470.99 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed.fastq.gz
108.00 MB
STAR
igg-e-coli-1-5-mix-20180416-ju_trimmed.bam
135.79 MB
igg-e-coli-1-5-mix-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
15.21 MB
igg-e-coli-1-5-mix-20180416-ju_trimmed.bam.bai
4.31 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_stats.txt
1.78 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
igg-e-coli-1-5-mix-20180416-ju_trimmed_singleAndMulti.bed.gz
36.58 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_single.bed.gz
33.36 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_reads_single.bed.gz
40.11 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_single.bedgraph
322.22 kB
igg-e-coli-1-5-mix-20180416-ju_trimmed_skipped.bam
1.37 kB
iCount reads proxy
stderr.txt
1.56 kB
fastqc
Directory
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_fastqc.zip
528.79 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.fastq.gz
15.21 MB
iCount xlsites
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_skipped.bam
460 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single.bed.gz
20.92 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_reads_single.bed.gz
25.48 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
52.21 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single.bedgraph
100.10 kB
iCount summary
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
593 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_type.tsv
321 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_single_summary_gene.tsv
72.86 kB
Paraclu
peaks.bed.gz
360 B
K-mers
positional_distribution_genome.tsv
154.77 kB
kmer_frequency_genome.tsv
5.20 kB
genome region.png
253.19 kB
iCount RNA-maps
results.tar.gz
251.83 kB
STAR
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
9.01 MB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bam
26.10 MB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bw
53.36 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
igg-e-coli-1-5-mix-20180416-jufastqgz_unmapped.bam.bai
8.23 kB

m6A_E. coli_ 0.8_20180416_JU

FASTQ file (single-end)
m6a-e-coli-0-8-20180416-ju_fastqc.zip
445.05 kB
fastqc
Directory
m6a-e-coli-0-8-20180416-ju.fastq.gz
37.97 MB
stderr.txt
1.11 kB
Cutadapt (single-end)
fastqc
Directory
m6a-e-coli-0-8-20180416-ju_trimmed.fastq.gz
36.07 MB
report.txt
694 B
m6a-e-coli-0-8-20180416-ju_trimmed_fastqc.zip
455.39 kB
iCount xlsites
m6a-e-coli-0-8-20180416-ju_trimmed_single.bed.gz
22.64 kB
m6a-e-coli-0-8-20180416-ju_trimmed_skipped.bam
1.37 kB
m6a-e-coli-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
24.24 kB
m6a-e-coli-0-8-20180416-ju_trimmed_reads_single.bed.gz
26.96 kB
m6a-e-coli-0-8-20180416-ju_trimmed_single.bedgraph
177.78 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.fastq.gz
3.30 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_fastqc.zip
530.21 kB
STAR
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
1.75 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bam.bai
8.55 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bam
5.40 MB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped.bw
23.95 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_skipped.bam
460 B
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bed.gz
7.07 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
8.54 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single.bedgraph
32.12 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
20.78 kB
iCount summary
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
32.43 kB
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
263 B
m6a-e-coli-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
522 B
iCount RNA-maps
results.tar.gz
199.02 kB
Paraclu
peaks.bed.gz
139 B
K-mers
positional_distribution_genome.tsv
108.10 kB
kmer_frequency_genome.tsv
2.43 kB
genome region.png
194.26 kB
STAR
m6a-e-coli-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
3.30 MB
m6a-e-coli-0-8-20180416-ju_trimmed.bam.bai
4.31 kB
m6a-e-coli-0-8-20180416-ju_trimmed.bam
44.54 MB
m6a-e-coli-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
m6a-e-coli-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m6a-e-coli-0-8-20180416-ju_trimmed.bw
25.22 kB

m1A_S. aureus_0.8_20180416_JU

iCount summary
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_type.tsv
264 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
462 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single_summary_gene.tsv
24.38 kB
FASTQ file (single-end)
stderr.txt
1.15 kB
fastqc
Directory
m1a-s-aureus-0-8-20180416-ju_fastqc.zip
551.93 kB
m1a-s-aureus-0-8-20180416-ju.fastq.gz
107.26 MB
Cutadapt (single-end)
report.txt
695 B
m1a-s-aureus-0-8-20180416-ju_trimmed.fastq.gz
106.48 MB
fastqc
Directory
m1a-s-aureus-0-8-20180416-ju_trimmed_fastqc.zip
544.36 kB
STAR
m1a-s-aureus-0-8-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
16.90 MB
m1a-s-aureus-0-8-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-s-aureus-0-8-20180416-ju_trimmed.bam.bai
3.77 kB
m1a-s-aureus-0-8-20180416-ju_trimmed.bam
218.49 MB
m1a-s-aureus-0-8-20180416-ju_trimmed_SJ.out.tab
0 B
iCount xlsites
m1a-s-aureus-0-8-20180416-ju_trimmed_single.bed.gz
19.91 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_singleAndMulti.bed.gz
25.76 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_skipped.bam
1.17 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_reads_single.bed.gz
24.02 kB
m1a-s-aureus-0-8-20180416-ju_trimmed_single.bedgraph
145.24 kB
iCount reads proxy
fastqc
Directory
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.fastq.gz
16.90 MB
stderr.txt
1.52 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_fastqc.zip
535.96 kB
STAR
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam
33.19 MB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
12.69 MB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bam.bai
5.34 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped.bw
22.92 kB
iCount xlsites
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_skipped.bam
457 B
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bed.gz
7.56 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
24.29 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_single.bedgraph
34.46 kB
m1a-s-aureus-0-8-20180416-jufastqgz_unmapped_reads_single.bed.gz
8.76 kB
iCount RNA-maps
results.tar.gz
160.46 kB
Paraclu
peaks.bed.gz
303 B
K-mers
kmer_frequency_genome.tsv
4.38 kB
positional_distribution_genome.tsv
139.55 kB
genome region.png
212.23 kB

m1A_S. aureus_1.5_20180416_JU

FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.15 kB
m1a-s-aureus-1-5-20180416-ju_fastqc.zip
547.38 kB
m1a-s-aureus-1-5-20180416-ju.fastq.gz
10.81 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
m1a-s-aureus-1-5-20180416-ju_trimmed.fastq.gz
3.70 MB
m1a-s-aureus-1-5-20180416-ju_trimmed_fastqc.zip
605.14 kB
STAR
m1a-s-aureus-1-5-20180416-ju_trimmed.bam
6.91 MB
m1a-s-aureus-1-5-20180416-ju_trimmed.bam.bai
3.41 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
883.42 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-s-aureus-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-s-aureus-1-5-20180416-ju_trimmed.bw
12.33 kB
iCount xlsites
m1a-s-aureus-1-5-20180416-ju_trimmed_skipped.bam
1.17 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
3.19 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_single.bed.gz
1.78 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_single.bedgraph
12.83 kB
m1a-s-aureus-1-5-20180416-ju_trimmed_reads_single.bed.gz
2.21 kB
iCount reads proxy
fastqc
Directory
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.fastq.gz
883.42 kB
stderr.txt
1.52 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_fastqc.zip
674.27 kB
STAR
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam.bai
5.16 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
744.13 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bw
6.79 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped.bam
1.61 MB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
iCount xlsites
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_skipped.bam
457 B
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
5.05 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
1.51 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bedgraph
5.77 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single.bed.gz
1.39 kB
iCount summary
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
252 B
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
4.89 kB
m1a-s-aureus-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
264 B
iCount RNA-maps
results.tar.gz
102.71 kB
Paraclu
peaks.bed.gz
35 B

m1A_E. coli_1.5_20180416_JU

FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.11 kB
m1a-e-coli-1-5-20180416-ju.fastq.gz
76.00 MB
m1a-e-coli-1-5-20180416-ju_fastqc.zip
537.96 kB
Cutadapt (single-end)
fastqc
Directory
m1a-e-coli-1-5-20180416-ju_trimmed.fastq.gz
75.72 MB
report.txt
693 B
m1a-e-coli-1-5-20180416-ju_trimmed_fastqc.zip
537.19 kB
STAR
m1a-e-coli-1-5-20180416-ju_trimmed_unmapped.out.mate1.fastq.gz
5.04 MB
m1a-e-coli-1-5-20180416-ju_trimmed.bam
96.26 MB
m1a-e-coli-1-5-20180416-ju_trimmed.bw
25.26 kB
m1a-e-coli-1-5-20180416-ju_trimmed_SJ.out.tab
0 B
m1a-e-coli-1-5-20180416-ju_trimmed_stats.txt
1.78 kB
m1a-e-coli-1-5-20180416-ju_trimmed.bam.bai
4.31 kB
iCount reads proxy
fastqc
Directory
stderr.txt
1.48 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.fastq.gz
5.04 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_fastqc.zip
582.38 kB
STAR
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
2.67 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bam
8.06 MB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_stats.txt
1.78 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_SJ.out.tab
0 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bw
13.48 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped.bam.bai
8.52 kB
iCount xlsites
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_singleAndMulti.bed.gz
12.19 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bed.gz
4.76 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single.bedgraph
21.09 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_skipped.bam
460 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_reads_single.bed.gz
5.79 kB
iCount summary
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_type.tsv
262 B
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_gene.tsv
22.32 kB
m1a-e-coli-1-5-20180416-jufastqgz_unmapped_single_summary_subtype.tsv
519 B
iCount RNA-maps
results.tar.gz
169.72 kB
Paraclu
peaks.bed.gz
205 B
K-mers
kmer_frequency_genome.tsv
3.54 kB
positional_distribution_genome.tsv
121.88 kB
genome region.png
206.87 kB
iCount xlsites
m1a-e-coli-1-5-20180416-ju_trimmed_reads_single.bed.gz
29.81 kB
m1a-e-coli-1-5-20180416-ju_trimmed_singleAndMulti.bed.gz
26.81 kB
m1a-e-coli-1-5-20180416-ju_trimmed_skipped.bam
1.37 kB
m1a-e-coli-1-5-20180416-ju_trimmed_single.bedgraph
235.68 kB
m1a-e-coli-1-5-20180416-ju_trimmed_single.bed.gz
24.60 kB

demux_nomatch.fastq.gz

FASTQ file (single-end)
fastqc
Directory
demux_nomatch_fastqc.zip
590.23 kB
demux_nomatch.fastq.gz
49.15 MB
stderr.txt
875 B