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Folder iconInsights of iCLIP experiments

Rahul Arora
May 31, 2019
Ultraviolet (UV) crosslinking and immunoprecipitation (CLIP) identifies the sites on RNAs that are in direct contact with RNA-binding proteins (RBPs). Several variants of CLIP exist, which require different computational approaches for analysis. This variety of approaches can create challenges for a novice user and can hamper insights from multi-study comparisons. Here, we produce data with multiple variants of CLIP and evaluate the data with various computational methods to better understand their suitability. We perform experiments for PTBP1 and eIF4A3 using individual-nucleotide resolution CLIP (iCLIP), employing either UV-C or photoactivatable 4-thiouridine (4SU) combined with UV-A crosslinking and compare the results with published data. As previously noted, the positions of complementary DNA (cDNA)-starts depend on cDNA length in several iCLIP experiments and we now find that this is caused by constrained cDNA-ends, which can result from the sequence and structure constraints of RNA fragmentation. These constraints are overcome when fragmentation by RNase I is efficient and when a broad cDNA size range is obtained. Our study also shows that if RNase does not efficiently cut within the binding sites, the original CLIP method is less capable of identifying the longer binding sites of RBPs. In contrast, we show that a broad size range of cDNAs in iCLIP allows the cDNA-starts to efficiently delineate the complete RNA-binding sites. We demonstrate the advantage of iCLIP and related methods that can amplify cDNAs that truncate at crosslink sites and we show that computational analyses based on cDNAs-starts are appropriate for such methods.

No Sample

Paraclu
peaks.bed.gz
34.48 kB
STAR
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bam
335.44 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bam.bai
3.69 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_SJ.out.tab
541.43 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bw
93.42 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
54.94 MB
FASTQ file (single-end)
ptbp1-hela-un1504-ih-20190611-ju_fastqc.zip
352.85 kB
fastqc
Directory
ptbp1-hela-un1504-ih-20190611-ju.fastq.gz
135.37 MB
stderr.txt
1.23 kB
K-mers
eif4a3-hela-un1504-ih-20190611-ju-3.tar.gz
459.78 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
669 B
K-mers
eif4a3-hela-un1504-ih-20190611-ju-1.tar.gz
325.95 kB
Upload iCount sample annotation
Haberman_annottaion_file_2.tab.gz
890 B
Haberman_annottaion_file_2.xlsx
15.57 kB
iCount xlsites
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.bed.gz
7.62 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_skipped.bam
4.94 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
8.58 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.bedgraph
34.88 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
13.19 MB
iCount RNA-maps
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.tar.gz
832.84 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_type.tsv
446 B
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_gene.tsv
1.87 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_subtype.tsv
1.01 kB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-3.fastq.gz
1.07 GB
eif4a3-hela-un1504-ih-20190611-ju-3_fastqc.zip
407.34 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_subtype.tsv
1006 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_type.tsv
430 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_gene.tsv
942.96 kB
iCount summary
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
438 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.00 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.64 MB
K-mers
eif4a3-hela-un1504-ih-20190611-ju-2.tar.gz
419.63 kB
K-mers
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1.tar.gz
257.71 kB
K-mers
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju.tar.gz
408.60 kB
K-mers
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju.tar.gz
426.31 kB
K-mers
eif4a3-hela-un1504-ih-20190611-ju.tar.gz
431.05 kB
K-mers
ptbp1-hek293-noab-h-un1504-ih-20190611-ju.tar.gz
471.09 kB
iCount summary
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_type.tsv
433 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_subtype.tsv
1011 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_gene.tsv
1.34 MB
iCount RNA-maps
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.tar.gz
623.88 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_type.tsv
443 B
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_subtype.tsv
1.00 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_gene.tsv
1.53 MB
Paraclu
peaks.bed.gz
23.51 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
206 B
STAR
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bam.bai
4.00 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_unmapped.out.mate1.fastq.gz
20.65 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bw
55.51 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bam
131.08 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_SJ.out.tab
206.10 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_stats.txt
1.80 kB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.tar.gz
1.06 MB
Paraclu
peaks.bed.gz
12.93 kB
K-mers
other_exon region.png
207.86 kB
kmer_frequency_ncRNA.tsv
5.85 kB
positional_distribution_intron.tsv
551.51 kB
kmer_frequency_intron.tsv
5.87 kB
intron region.png
187.18 kB
positional_distribution_ncRNA.tsv
468.95 kB
kmer_frequency_utr3.tsv
5.83 kB
kmer_frequency_genome.tsv
5.87 kB
utr3 region.png
241.60 kB
ncRNA region.png
223.89 kB
kmer_frequency_other_exon.tsv
5.70 kB
positional_distribution_genome.tsv
563.45 kB
positional_distribution_utr3.tsv
471.33 kB
positional_distribution_other_exon.tsv
295.77 kB
genome region.png
173.20 kB
iCount RNA-maps
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.tar.gz
1.03 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-un1504-ih-20190611-ju_trimmed_fastqc.zip
364.19 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.fastq.gz
137.23 MB
report.txt
700 B
iCount summary
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
442 B
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
2.17 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.01 kB
Upload iCount sample annotation
Haberman_annotation_file.xlsx
24.49 kB
Haberman_annotation_file.tab.gz
1.09 kB
FASTQ file (single-end)
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju.fastq.gz
213.76 MB
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_fastqc.zip
312.91 kB
stderr.txt
1.44 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.bed.gz
9.52 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_skipped.bam
4.34 kB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_singleAndMulti.bed.gz
19.63 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.bedgraph
44.29 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_reads_single.bed.gz
11.35 MB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_singleAndMulti.bed.gz
9.11 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.bedgraph
19.93 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.bed.gz
4.39 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_skipped.bam
3.54 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_reads_single.bed.gz
5.24 MB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_skipped.bam
2.93 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.bed.gz
932.41 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_singleAndMulti.bed.gz
1.96 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_reads_single.bed.gz
1.08 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.bedgraph
3.98 MB
iCount xlsites
ptbp1-hela-un1504-ih-20190611-ju_trimmed_skipped.bam
3.50 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
11.50 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single.bed.gz
6.60 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
7.18 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single.bedgraph
30.87 MB
STAR
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bam.bai
2.81 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bam
140.86 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_stats.txt
1.81 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_unmapped.out.mate1.fastq.gz
28.96 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_SJ.out.tab
1.33 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bw
26.70 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
703 B
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.fastq.gz
1.06 GB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_fastqc.zip
387.64 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
9.19 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_skipped.bam
3.09 kB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.bedgraph
22.54 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.bed.gz
4.71 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
5.64 MB
Paraclu
peaks.bed.gz
203.54 kB
Cutadapt (single-end)
report.txt
703 B
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_fastqc.zip
392.55 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.fastq.gz
487.91 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
701 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_fastqc.zip
446.24 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.fastq.gz
97.95 MB
Cutadapt (single-end)
eif4a3-hela-un1504-ih-20190611-ju_trimmed.fastq.gz
528.56 MB
fastqc
Directory
report.txt
701 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_fastqc.zip
382.93 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_fastqc.zip
320.17 kB
report.txt
709 B
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.fastq.gz
629.19 MB
Cutadapt (single-end)
report.txt
711 B
fastqc
Directory
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_fastqc.zip
324.90 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.fastq.gz
347.76 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.fastq.gz
79.04 MB
report.txt
712 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_fastqc.zip
317.72 kB
iCount xlsites
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_skipped.bam
6.96 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
37.73 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.bed.gz
21.50 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
24.09 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.bedgraph
100.73 MB
iCount RNA-maps
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.tar.gz
1.37 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
710 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_fastqc.zip
314.27 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.fastq.gz
218.15 MB
STAR
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.bam
575.39 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.bam.bai
3.02 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
98.61 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_SJ.out.tab
974.14 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
22.05 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
13.57 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.bed.gz
12.05 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_skipped.bam
4.37 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.bedgraph
55.74 MB
Paraclu
peaks.bed.gz
75.03 kB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.tar.gz
1.59 MB
iCount xlsites
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_singleAndMulti.bed.gz
5.25 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.bed.gz
2.87 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_reads_single.bed.gz
3.25 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.bedgraph
12.73 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_skipped.bam
3.31 kB
iCount RNA-maps
results.tar.gz
875.03 kB
iCount summary
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.49 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1021 B
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
437 B
Paraclu
peaks.bed.gz
85.93 kB
iCount summary
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.00 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
441 B
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.96 MB
STAR
eif4a3-hela-un1504-ih-20190611-ju_trimmed.bam.bai
3.77 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed.bam
730.75 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
98.70 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_stats.txt
1.82 kB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_SJ.out.tab
3.68 MB
Paraclu
peaks.bed.gz
4.11 kB
STAR
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bam.bai
3.90 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
21.98 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bam
274.80 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_SJ.out.tab
295.89 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bw
89.83 kB
FASTQ file (single-end)
fastqc
Directory
NH_merged_fastq_file.fastq.gz
6.26 GB
stderr.txt
1015 B
NH_merged_fastq_file_fastqc.zip
520.92 kB
FASTQ file (single-end)
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1.fastq.gz
77.66 MB
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_fastqc.zip
315.21 kB
stderr.txt
1.48 kB
STAR
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_stats.txt
1.82 kB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_unmapped.out.mate1.fastq.gz
124.65 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_SJ.out.tab
3.54 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.bam.bai
4.05 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.bam
1.54 GB
FASTQ file (single-end)
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_fastqc.zip
322.43 kB
fastqc
Directory
stderr.txt
1.40 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju.fastq.gz
616.42 MB
FASTQ file (single-end)
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju.fastq.gz
341.25 MB
fastqc
Directory
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_fastqc.zip
331.72 kB
stderr.txt
1.51 kB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.tar.gz
2.51 MB
Paraclu
peaks.bed.gz
128.07 kB
STAR
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
174.84 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.bam.bai
2.56 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.bam
1005.76 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_SJ.out.tab
1.55 MB
STAR
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_unmapped.out.mate1.fastq.gz
55.26 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_stats.txt
1.81 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.bam.bai
4.15 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_SJ.out.tab
1.89 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.bam
681.18 MB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-2_fastqc.zip
404.96 kB
eif4a3-hela-un1504-ih-20190611-ju-2.fastq.gz
492.40 MB
FASTQ file (single-end)
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju-1.fastq.gz
99.10 MB
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-1_fastqc.zip
443.47 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1023 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
439 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.54 MB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.tar.gz
2.36 MB
FASTQ file (single-end)
Iclip_experiment_sample.fastq.gz
176.09 MB
fastqc
Directory
Iclip_experiment_sample_fastqc.zip
549.73 kB
stderr.txt
1.05 kB
Paraclu
peaks.bed.gz
249.46 kB
FASTQ file (single-end)
eif4a3-hela-un1504-ih-20190611-ju.fastq.gz
528.34 MB
stderr.txt
1.25 kB
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju_fastqc.zip
386.48 kB

PTBP1_HEK293_siCtrl_L_Un1504_Ih_20190611_JU

iCount xlsites
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.bed.gz
7.62 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_skipped.bam
4.94 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
8.58 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.bedgraph
34.88 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
13.19 MB
iCount RNA-maps
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single.tar.gz
832.84 kB
iCount summary
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
438 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.00 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.64 MB
K-mers
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju.tar.gz
408.60 kB
STAR
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bam.bai
3.69 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_SJ.out.tab
541.43 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bam
335.44 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.bw
93.42 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
54.94 MB
FASTQ file (single-end)
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju.fastq.gz
213.76 MB
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_fastqc.zip
312.91 kB
stderr.txt
1.44 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
710 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed_fastqc.zip
314.27 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju_trimmed.fastq.gz
218.15 MB
Paraclu
peaks.bed.gz
34.48 kB

PTBP1_HEK293_NoAb_H_Un1504_Ih_20190611_JU

K-mers
ptbp1-hek293-noab-h-un1504-ih-20190611-ju.tar.gz
471.09 kB
iCount summary
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
442 B
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
2.17 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.01 kB
Paraclu
peaks.bed.gz
203.54 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_fastqc.zip
320.17 kB
report.txt
709 B
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.fastq.gz
629.19 MB
iCount xlsites
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_skipped.bam
6.96 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
37.73 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.bed.gz
21.50 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
24.09 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.bedgraph
100.73 MB
iCount RNA-maps
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_single.tar.gz
1.37 MB
FASTQ file (single-end)
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_fastqc.zip
322.43 kB
fastqc
Directory
stderr.txt
1.40 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju.fastq.gz
616.42 MB
STAR
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
174.84 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.bam.bai
2.56 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed.bam
1005.76 MB
ptbp1-hek293-noab-h-un1504-ih-20190611-ju_trimmed_SJ.out.tab
1.55 MB

eIF4A3_Hela__Un1504_Ih_20190611_JU_2

K-mers
eif4a3-hela-un1504-ih-20190611-ju-2.tar.gz
419.63 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_type.tsv
443 B
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_subtype.tsv
1.00 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single_summary_gene.tsv
1.53 MB
Paraclu
peaks.bed.gz
23.51 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_singleAndMulti.bed.gz
9.11 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.bedgraph
19.93 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.bed.gz
4.39 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_skipped.bam
3.54 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_reads_single.bed.gz
5.24 MB
Cutadapt (single-end)
report.txt
703 B
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_fastqc.zip
392.55 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.fastq.gz
487.91 MB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_single.tar.gz
1.59 MB
STAR
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_unmapped.out.mate1.fastq.gz
55.26 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_stats.txt
1.81 kB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.bam.bai
4.15 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed_SJ.out.tab
1.89 MB
eif4a3-hela-un1504-ih-20190611-ju-2_trimmed.bam
681.18 MB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-2_fastqc.zip
404.96 kB
eif4a3-hela-un1504-ih-20190611-ju-2.fastq.gz
492.40 MB

Iclip_experiment_sample.fastq.gz

FASTQ file (single-end)
Iclip_experiment_sample.fastq.gz
176.09 MB
fastqc
Directory
Iclip_experiment_sample_fastqc.zip
549.73 kB
stderr.txt
1.05 kB

PTBP1_Hela__Un1504_Ih_20190611_JU

FASTQ file (single-end)
fastqc
Directory
ptbp1-hela-un1504-ih-20190611-ju.fastq.gz
135.37 MB
stderr.txt
1.23 kB
ptbp1-hela-un1504-ih-20190611-ju_fastqc.zip
352.85 kB
K-mers
other_exon region.png
207.86 kB
kmer_frequency_ncRNA.tsv
5.85 kB
positional_distribution_intron.tsv
551.51 kB
kmer_frequency_intron.tsv
5.87 kB
intron region.png
187.18 kB
positional_distribution_ncRNA.tsv
468.95 kB
kmer_frequency_utr3.tsv
5.83 kB
kmer_frequency_genome.tsv
5.87 kB
utr3 region.png
241.60 kB
ncRNA region.png
223.89 kB
kmer_frequency_other_exon.tsv
5.70 kB
positional_distribution_genome.tsv
563.45 kB
positional_distribution_utr3.tsv
471.33 kB
positional_distribution_other_exon.tsv
295.77 kB
genome region.png
173.20 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-un1504-ih-20190611-ju_trimmed_fastqc.zip
364.19 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.fastq.gz
137.23 MB
report.txt
700 B
iCount xlsites
ptbp1-hela-un1504-ih-20190611-ju_trimmed_skipped.bam
3.50 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
11.50 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single.bed.gz
6.60 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
7.18 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single.bedgraph
30.87 MB
iCount RNA-maps
results.tar.gz
875.03 kB
iCount summary
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.49 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1021 B
ptbp1-hela-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
437 B
Paraclu
peaks.bed.gz
85.93 kB
STAR
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bam.bai
3.90 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
21.98 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bam
274.80 MB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed_SJ.out.tab
295.89 kB
ptbp1-hela-un1504-ih-20190611-ju_trimmed.bw
89.83 kB

NH_merged_fastq_file.fastq.gz

FASTQ file (single-end)
fastqc
Directory
NH_merged_fastq_file.fastq.gz
6.26 GB
stderr.txt
1015 B
NH_merged_fastq_file_fastqc.zip
520.92 kB

PTBP1_HEK293_siCtrl_L_Un1504_Ih_20190611_JU_1

K-mers
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1.tar.gz
257.71 kB
iCount summary
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_type.tsv
433 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_subtype.tsv
1011 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single_summary_gene.tsv
1.34 MB
iCount RNA-maps
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.tar.gz
623.88 kB
STAR
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bam.bai
4.00 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_unmapped.out.mate1.fastq.gz
20.65 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bw
55.51 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.bam
131.08 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_SJ.out.tab
206.10 kB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_stats.txt
1.80 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed.fastq.gz
79.04 MB
report.txt
712 B
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_fastqc.zip
317.72 kB
iCount xlsites
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_singleAndMulti.bed.gz
5.25 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.bed.gz
2.87 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_reads_single.bed.gz
3.25 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_single.bedgraph
12.73 MB
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_trimmed_skipped.bam
3.31 kB
Paraclu
peaks.bed.gz
4.11 kB
FASTQ file (single-end)
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1.fastq.gz
77.66 MB
fastqc
Directory
ptbp1-hek293-sictrl-l-un1504-ih-20190611-ju-1_fastqc.zip
315.21 kB
stderr.txt
1.48 kB

PTBP1_HEK293_siCtrl_H_Un1504_Ih_20190611_JU

K-mers
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju.tar.gz
426.31 kB
iCount RNA-maps
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.tar.gz
1.03 MB
Cutadapt (single-end)
report.txt
711 B
fastqc
Directory
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_fastqc.zip
324.90 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.fastq.gz
347.76 MB
STAR
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.bam
575.39 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed.bam.bai
3.02 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
98.61 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_SJ.out.tab
974.14 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
22.05 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
13.57 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.bed.gz
12.05 MB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_skipped.bam
4.37 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single.bedgraph
55.74 MB
Paraclu
peaks.bed.gz
75.03 kB
iCount summary
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1.00 kB
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
441 B
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.96 MB
FASTQ file (single-end)
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju.fastq.gz
341.25 MB
fastqc
Directory
ptbp1-hek293-sictrl-h-un1504-ih-20190611-ju_fastqc.zip
331.72 kB
stderr.txt
1.51 kB

eIF4A3_Hela__Un1504_Ih_20190611_JU

K-mers
eif4a3-hela-un1504-ih-20190611-ju.tar.gz
431.05 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju_trimmed_singleAndMulti.bed.gz
9.19 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_skipped.bam
3.09 kB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.bedgraph
22.54 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.bed.gz
4.71 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_reads_single.bed.gz
5.64 MB
Cutadapt (single-end)
eif4a3-hela-un1504-ih-20190611-ju_trimmed.fastq.gz
528.56 MB
fastqc
Directory
report.txt
701 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_fastqc.zip
382.93 kB
STAR
eif4a3-hela-un1504-ih-20190611-ju_trimmed.bam.bai
3.77 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed.bam
730.75 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_unmapped.out.mate1.fastq.gz
98.70 MB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_stats.txt
1.82 kB
eif4a3-hela-un1504-ih-20190611-ju_trimmed_SJ.out.tab
3.68 MB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_subtype.tsv
1023 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_type.tsv
439 B
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single_summary_gene.tsv
1.54 MB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju_trimmed_single.tar.gz
2.36 MB
Paraclu
peaks.bed.gz
249.46 kB
FASTQ file (single-end)
eif4a3-hela-un1504-ih-20190611-ju.fastq.gz
528.34 MB
stderr.txt
1.25 kB
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju_fastqc.zip
386.48 kB

eIF4A3_Hela__Un1504_Ih_20190611_JU_1

K-mers
eif4a3-hela-un1504-ih-20190611-ju-1.tar.gz
325.95 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_subtype.tsv
1006 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_type.tsv
430 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single_summary_gene.tsv
942.96 kB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.tar.gz
1.06 MB
Paraclu
peaks.bed.gz
12.93 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_skipped.bam
2.93 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.bed.gz
932.41 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_singleAndMulti.bed.gz
1.96 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_reads_single.bed.gz
1.08 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_single.bedgraph
3.98 MB
STAR
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bam.bai
2.81 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bam
140.86 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_stats.txt
1.81 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_unmapped.out.mate1.fastq.gz
28.96 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_SJ.out.tab
1.33 MB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.bw
26.70 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
701 B
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed_fastqc.zip
446.24 kB
eif4a3-hela-un1504-ih-20190611-ju-1_trimmed.fastq.gz
97.95 MB
FASTQ file (single-end)
fastqc
Directory
eif4a3-hela-un1504-ih-20190611-ju-1.fastq.gz
99.10 MB
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-1_fastqc.zip
443.47 kB

eIF4A3_Hela__Un1504_Ih_20190611_JU_3

K-mers
eif4a3-hela-un1504-ih-20190611-ju-3.tar.gz
459.78 kB
iCount summary
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_type.tsv
446 B
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_gene.tsv
1.87 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single_summary_subtype.tsv
1.01 kB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.28 kB
eif4a3-hela-un1504-ih-20190611-ju-3.fastq.gz
1.07 GB
eif4a3-hela-un1504-ih-20190611-ju-3_fastqc.zip
407.34 kB
iCount xlsites
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.bed.gz
9.52 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_skipped.bam
4.34 kB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_singleAndMulti.bed.gz
19.63 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.bedgraph
44.29 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_reads_single.bed.gz
11.35 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
703 B
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.fastq.gz
1.06 GB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_fastqc.zip
387.64 kB
STAR
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_stats.txt
1.82 kB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_unmapped.out.mate1.fastq.gz
124.65 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_SJ.out.tab
3.54 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.bam.bai
4.05 MB
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed.bam
1.54 GB
iCount RNA-maps
eif4a3-hela-un1504-ih-20190611-ju-3_trimmed_single.tar.gz
2.51 MB
Paraclu
peaks.bed.gz
128.07 kB