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Folder iconTIRR and 53BP1 iCLIP

apibot
Sept. 4, 2018

No Sample

Cutadapt (single-end)
nudt16l1-oht-20180517-ju_trimmed.fastq.gz
141.76 MB
nudt16l1-oht-20180517-ju_trimmed_fastqc.zip
466.14 kB
report.txt
691 B
STAR
nudt16l1-oht-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
35.69 MB
nudt16l1-oht-20180517-ju_trimmed.bam
426.84 MB
nudt16l1-oht-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-oht-20180517-ju_trimmed.bw
132.31 kB
nudt16l1-oht-20180517-ju_trimmed_SJ.out.tab
1.04 MB
nudt16l1-oht-20180517-ju_trimmed.bam.bai
3.61 MB
STAR
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
8.89 MB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_stats.txt
1.80 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed.bam.bai
3.35 MB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed.bam
141.50 MB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed.bw
40.00 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_SJ.out.tab
222.97 kB
iCount xlsites
nudt16l1-oht-20180517-ju_trimmed_skipped.bam
3.63 kB
nudt16l1-oht-20180517-ju_trimmed_single.bed.gz
7.89 MB
nudt16l1-oht-20180517-ju_trimmed_single.bedgraph
35.99 MB
nudt16l1-oht-20180517-ju_trimmed_singleAndMulti.bed.gz
20.54 MB
iCount summary
nudt16l1-oht-20180517-ju_trimmed_single_summary_gene.tsv
1.46 MB
nudt16l1-oht-20180517-ju_trimmed_single_summary_subtype.tsv
658 B
nudt16l1-oht-20180517-ju_trimmed_single_summary_type.tsv
273 B
iCount xlsites
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_singleAndMulti.bed.gz
1.90 MB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_skipped.bam
2.94 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_single.bed.gz
609.55 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_single.bedgraph
2.34 MB
iCount summary
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_single_summary_subtype.tsv
639 B
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_single_summary_gene.tsv
783.02 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_single_summary_type.tsv
267 B
Cutadapt (single-end)
tp53bp1-m-2-20180517-ju_trimmed.fastq.gz
86.27 MB
fastqc
Directory
report.txt
690 B
tp53bp1-m-2-20180517-ju_trimmed_fastqc.zip
483.52 kB
STAR
tp53bp1-m-2-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
18.46 MB
tp53bp1-m-2-20180517-ju_trimmed.bw
48.53 kB
tp53bp1-m-2-20180517-ju_trimmed.bam
338.86 MB
tp53bp1-m-2-20180517-ju_trimmed.bam.bai
3.94 MB
tp53bp1-m-2-20180517-ju_trimmed_stats.txt
1.81 kB
tp53bp1-m-2-20180517-ju_trimmed_SJ.out.tab
275.82 kB
iCount xlsites
tp53bp1-m-2-20180517-ju_trimmed_single.bedgraph
3.44 MB
tp53bp1-m-2-20180517-ju_trimmed_single.bed.gz
889.94 kB
tp53bp1-m-2-20180517-ju_trimmed_singleAndMulti.bed.gz
2.85 MB
tp53bp1-m-2-20180517-ju_trimmed_skipped.bam
2.94 kB
iCount summary
tp53bp1-m-2-20180517-ju_trimmed_single_summary_subtype.tsv
644 B
tp53bp1-m-2-20180517-ju_trimmed_single_summary_type.tsv
265 B
tp53bp1-m-2-20180517-ju_trimmed_single_summary_gene.tsv
880.29 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
693 B
empty-flag-1-20180517-ju_trimmed.fastq.gz
51.12 MB
empty-flag-1-20180517-ju_trimmed_fastqc.zip
460.64 kB
STAR
empty-flag-1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
22.13 MB
empty-flag-1-20180517-ju_trimmed.bam
124.60 MB
empty-flag-1-20180517-ju_trimmed.bam.bai
2.74 MB
empty-flag-1-20180517-ju_trimmed_SJ.out.tab
427.84 kB
empty-flag-1-20180517-ju_trimmed.bw
37.83 kB
empty-flag-1-20180517-ju_trimmed_stats.txt
1.81 kB
iCount xlsites
empty-flag-1-20180517-ju_trimmed_singleAndMulti.bed.gz
1.67 MB
empty-flag-1-20180517-ju_trimmed_skipped.bam
3.58 kB
empty-flag-1-20180517-ju_trimmed_single.bedgraph
4.19 MB
empty-flag-1-20180517-ju_trimmed_single.bed.gz
1009.79 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
nudt16l1-loop-2-20180517-ju_trimmed_fastqc.zip
466.33 kB
nudt16l1-loop-2-20180517-ju_trimmed.fastq.gz
118.64 MB
STAR
nudt16l1-loop-2-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
30.56 MB
nudt16l1-loop-2-20180517-ju_trimmed.bam.bai
3.99 MB
nudt16l1-loop-2-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-loop-2-20180517-ju_trimmed_SJ.out.tab
766.43 kB
nudt16l1-loop-2-20180517-ju_trimmed.bam
342.36 MB
nudt16l1-loop-2-20180517-ju_trimmed.bw
115.34 kB
iCount xlsites
nudt16l1-loop-2-20180517-ju_trimmed_skipped.bam
3.52 kB
nudt16l1-loop-2-20180517-ju_trimmed_single.bed.gz
5.38 MB
nudt16l1-loop-2-20180517-ju_trimmed_single.bedgraph
23.86 MB
nudt16l1-loop-2-20180517-ju_trimmed_singleAndMulti.bed.gz
14.49 MB
iCount summary
nudt16l1-loop-2-20180517-ju_trimmed_single_summary_subtype.tsv
648 B
nudt16l1-loop-2-20180517-ju_trimmed_single_summary_gene.tsv
1.28 MB
nudt16l1-loop-2-20180517-ju_trimmed_single_summary_type.tsv
270 B
Cutadapt (single-end)
fastqc
Directory
report.txt
695 B
tp53bp1-m-1553-1-20180517-ju_trimmed_fastqc.zip
499.25 kB
tp53bp1-m-1553-1-20180517-ju_trimmed.fastq.gz
39.31 MB
STAR
tp53bp1-m-1553-1-20180517-ju_trimmed_stats.txt
1.80 kB
tp53bp1-m-1553-1-20180517-ju_trimmed.bam
176.96 MB
tp53bp1-m-1553-1-20180517-ju_trimmed.bam.bai
3.18 MB
tp53bp1-m-1553-1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
8.99 MB
tp53bp1-m-1553-1-20180517-ju_trimmed.bw
36.74 kB
tp53bp1-m-1553-1-20180517-ju_trimmed_SJ.out.tab
161.56 kB
iCount xlsites
tp53bp1-m-1553-1-20180517-ju_trimmed_single.bed.gz
449.37 kB
tp53bp1-m-1553-1-20180517-ju_trimmed_single.bedgraph
1.69 MB
tp53bp1-m-1553-1-20180517-ju_trimmed_singleAndMulti.bed.gz
1.66 MB
tp53bp1-m-1553-1-20180517-ju_trimmed_skipped.bam
3.38 kB
iCount summary
tp53bp1-m-1553-1-20180517-ju_trimmed_single_summary_subtype.tsv
641 B
tp53bp1-m-1553-1-20180517-ju_trimmed_single_summary_type.tsv
268 B
tp53bp1-m-1553-1-20180517-ju_trimmed_single_summary_gene.tsv
709.68 kB
Cutadapt (single-end)
report.txt
689 B
fastqc
Directory
nudt16l1-1-20180517-ju_trimmed.fastq.gz
129.01 MB
nudt16l1-1-20180517-ju_trimmed_fastqc.zip
458.02 kB
STAR
nudt16l1-1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
33.46 MB
nudt16l1-1-20180517-ju_trimmed.bam.bai
3.55 MB
nudt16l1-1-20180517-ju_trimmed.bam
359.05 MB
nudt16l1-1-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-1-20180517-ju_trimmed_SJ.out.tab
978.61 kB
nudt16l1-1-20180517-ju_trimmed.bw
147.49 kB
iCount xlsites
nudt16l1-1-20180517-ju_trimmed_singleAndMulti.bed.gz
21.09 MB
nudt16l1-1-20180517-ju_trimmed_single.bed.gz
8.04 MB
nudt16l1-1-20180517-ju_trimmed_single.bedgraph
36.47 MB
nudt16l1-1-20180517-ju_trimmed_skipped.bam
4.03 kB
iCount summary
nudt16l1-1-20180517-ju_trimmed_single_summary_subtype.tsv
656 B
nudt16l1-1-20180517-ju_trimmed_single_summary_gene.tsv
1.44 MB
nudt16l1-1-20180517-ju_trimmed_single_summary_type.tsv
271 B
Cutadapt (single-end)
fastqc
Directory
tp53bp1-m-1553-oht-20180517-ju_trimmed.fastq.gz
84.75 MB
tp53bp1-m-1553-oht-20180517-ju_trimmed_fastqc.zip
490.70 kB
report.txt
697 B
Cutadapt (single-end)
nudt16l1-20180517-ju_trimmed.fastq.gz
224.52 MB
report.txt
688 B
fastqc
Directory
nudt16l1-20180517-ju_trimmed_fastqc.zip
466.95 kB
STAR
tp53bp1-m-1553-oht-20180517-ju_trimmed.bam
397.51 MB
tp53bp1-m-1553-oht-20180517-ju_trimmed.bam.bai
3.70 MB
tp53bp1-m-1553-oht-20180517-ju_trimmed_SJ.out.tab
231.02 kB
tp53bp1-m-1553-oht-20180517-ju_trimmed_stats.txt
1.81 kB
tp53bp1-m-1553-oht-20180517-ju_trimmed.bw
42.46 kB
tp53bp1-m-1553-oht-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
18.85 MB
STAR
nudt16l1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
63.90 MB
nudt16l1-20180517-ju_trimmed.bam
516.04 MB
nudt16l1-20180517-ju_trimmed.bam.bai
3.30 MB
nudt16l1-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-20180517-ju_trimmed_SJ.out.tab
1.23 MB
nudt16l1-20180517-ju_trimmed.bw
160.38 kB
iCount xlsites
tp53bp1-m-1553-oht-20180517-ju_trimmed_skipped.bam
2.94 kB
tp53bp1-m-1553-oht-20180517-ju_trimmed_singleAndMulti.bed.gz
2.37 MB
tp53bp1-m-1553-oht-20180517-ju_trimmed_single.bedgraph
2.46 MB
tp53bp1-m-1553-oht-20180517-ju_trimmed_single.bed.gz
642.03 kB
iCount xlsites
nudt16l1-20180517-ju_trimmed_skipped.bam
4.44 kB
nudt16l1-20180517-ju_trimmed_single.bed.gz
11.51 MB
nudt16l1-20180517-ju_trimmed_singleAndMulti.bed.gz
22.61 MB
nudt16l1-20180517-ju_trimmed_single.bedgraph
53.26 MB
iCount summary
tp53bp1-m-1553-oht-20180517-ju_trimmed_single_summary_subtype.tsv
641 B
tp53bp1-m-1553-oht-20180517-ju_trimmed_single_summary_type.tsv
265 B
tp53bp1-m-1553-oht-20180517-ju_trimmed_single_summary_gene.tsv
800.68 kB
iCount summary
nudt16l1-20180517-ju_trimmed_single_summary_gene.tsv
1.44 MB
nudt16l1-20180517-ju_trimmed_single_summary_subtype.tsv
658 B
nudt16l1-20180517-ju_trimmed_single_summary_type.tsv
274 B
Cutadapt (single-end)
fastqc
Directory
empty-flag-oht-1-20180517-ju_trimmed.fastq.gz
11.09 MB
report.txt
694 B
empty-flag-oht-1-20180517-ju_trimmed_fastqc.zip
506.53 kB
STAR
empty-flag-oht-1-20180517-ju_trimmed.bam.bai
2.17 MB
empty-flag-oht-1-20180517-ju_trimmed.bam
43.67 MB
empty-flag-oht-1-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
2.69 MB
empty-flag-oht-1-20180517-ju_trimmed_stats.txt
1.80 kB
empty-flag-oht-1-20180517-ju_trimmed_SJ.out.tab
48.66 kB
empty-flag-oht-1-20180517-ju_trimmed.bw
25.13 kB
iCount xlsites
empty-flag-oht-1-20180517-ju_trimmed_single.bed.gz
146.45 kB
empty-flag-oht-1-20180517-ju_trimmed_singleAndMulti.bed.gz
570.29 kB
empty-flag-oht-1-20180517-ju_trimmed_single.bedgraph
532.40 kB
empty-flag-oht-1-20180517-ju_trimmed_skipped.bam
2.94 kB
iCount summary
empty-flag-oht-1-20180517-ju_trimmed_single_summary_gene.tsv
407.92 kB
empty-flag-oht-1-20180517-ju_trimmed_single_summary_subtype.tsv
625 B
empty-flag-oht-1-20180517-ju_trimmed_single_summary_type.tsv
261 B
Cutadapt (single-end)
fastqc
Directory
nudt16l1-10e-20180517-ju_trimmed.fastq.gz
161.14 MB
nudt16l1-10e-20180517-ju_trimmed_fastqc.zip
458.92 kB
report.txt
691 B
STAR
nudt16l1-10e-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
40.40 MB
nudt16l1-10e-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-10e-20180517-ju_trimmed.bam.bai
3.38 MB
nudt16l1-10e-20180517-ju_trimmed.bam
454.60 MB
nudt16l1-10e-20180517-ju_trimmed.bw
154.44 kB
nudt16l1-10e-20180517-ju_trimmed_SJ.out.tab
1.18 MB
iCount xlsites
nudt16l1-10e-20180517-ju_trimmed_single.bed.gz
9.60 MB
nudt16l1-10e-20180517-ju_trimmed_singleAndMulti.bed.gz
24.74 MB
nudt16l1-10e-20180517-ju_trimmed_single.bedgraph
43.82 MB
nudt16l1-10e-20180517-ju_trimmed_skipped.bam
3.92 kB
iCount summary
nudt16l1-10e-20180517-ju_trimmed_single_summary_type.tsv
272 B
nudt16l1-10e-20180517-ju_trimmed_single_summary_subtype.tsv
659 B
nudt16l1-10e-20180517-ju_trimmed_single_summary_gene.tsv
1.50 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
693 B
tp53bp1-m-1553-20180517-ju_trimmed.fastq.gz
69.06 MB
tp53bp1-m-1553-20180517-ju_trimmed_fastqc.zip
494.05 kB
iCount xlsites
tp53bp1-m-1553-20180517-ju_trimmed_skipped.bam
2.94 kB
tp53bp1-m-1553-20180517-ju_trimmed_single.bed.gz
577.01 kB
tp53bp1-m-1553-20180517-ju_trimmed_single.bedgraph
2.20 MB
tp53bp1-m-1553-20180517-ju_trimmed_singleAndMulti.bed.gz
2.08 MB
iCount summary
tp53bp1-m-1553-20180517-ju_trimmed_single_summary_type.tsv
269 B
tp53bp1-m-1553-20180517-ju_trimmed_single_summary_subtype.tsv
640 B
tp53bp1-m-1553-20180517-ju_trimmed_single_summary_gene.tsv
782.74 kB
Cutadapt (single-end)
fastqc
Directory
tp53bp1-m-20180517-ju_trimmed_fastqc.zip
493.12 kB
tp53bp1-m-20180517-ju_trimmed.fastq.gz
20.95 MB
report.txt
688 B
STAR
tp53bp1-m-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
4.91 MB
tp53bp1-m-20180517-ju_trimmed.bam
78.49 MB
tp53bp1-m-20180517-ju_trimmed.bam.bai
2.76 MB
tp53bp1-m-20180517-ju_trimmed_stats.txt
1.80 kB
tp53bp1-m-20180517-ju_trimmed_SJ.out.tab
99.51 kB
tp53bp1-m-20180517-ju_trimmed.bw
30.53 kB
STAR
tp53bp1-m-1495-oht-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
49.36 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed.bam.bai
4.57 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed_SJ.out.tab
712.17 kB
tp53bp1-m-1495-oht-20180517-ju_trimmed.bam
964.11 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed.bw
80.79 kB
tp53bp1-m-1495-oht-20180517-ju_trimmed_stats.txt
1.81 kB
iCount xlsites
tp53bp1-m-20180517-ju_trimmed_single.bedgraph
1.12 MB
tp53bp1-m-20180517-ju_trimmed_skipped.bam
2.94 kB
tp53bp1-m-20180517-ju_trimmed_singleAndMulti.bed.gz
1.08 MB
tp53bp1-m-20180517-ju_trimmed_single.bed.gz
302.86 kB
iCount summary
tp53bp1-m-20180517-ju_trimmed_single_summary_subtype.tsv
634 B
tp53bp1-m-20180517-ju_trimmed_single_summary_type.tsv
263 B
tp53bp1-m-20180517-ju_trimmed_single_summary_gene.tsv
599.37 kB
iCount xlsites
tp53bp1-m-1495-oht-20180517-ju_trimmed_skipped.bam
3.98 kB
tp53bp1-m-1495-oht-20180517-ju_trimmed_singleAndMulti.bed.gz
6.12 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed_single.bed.gz
2.07 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed_single.bedgraph
8.60 MB
iCount summary
tp53bp1-m-1495-oht-20180517-ju_trimmed_single_summary_type.tsv
271 B
tp53bp1-m-1495-oht-20180517-ju_trimmed_single_summary_subtype.tsv
651 B
tp53bp1-m-1495-oht-20180517-ju_trimmed_single_summary_gene.tsv
1.11 MB
Cutadapt (single-end)
fastqc
Directory
empty-flag-20180517-ju_trimmed.fastq.gz
11.83 MB
report.txt
690 B
empty-flag-20180517-ju_trimmed_fastqc.zip
527.06 kB
STAR
empty-flag-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
6.58 MB
empty-flag-20180517-ju_trimmed.bam.bai
2.89 MB
empty-flag-20180517-ju_trimmed.bam
35.28 MB
empty-flag-20180517-ju_trimmed_stats.txt
1.80 kB
empty-flag-20180517-ju_trimmed.bw
27.72 kB
empty-flag-20180517-ju_trimmed_SJ.out.tab
75.96 kB
iCount xlsites
empty-flag-20180517-ju_trimmed_single.bed.gz
268.94 kB
empty-flag-20180517-ju_trimmed_skipped.bam
3.25 kB
empty-flag-20180517-ju_trimmed_singleAndMulti.bed.gz
974.28 kB
empty-flag-20180517-ju_trimmed_single.bedgraph
1014.40 kB
iCount summary
empty-flag-20180517-ju_trimmed_single_summary_type.tsv
262 B
empty-flag-20180517-ju_trimmed_single_summary_gene.tsv
548.83 kB
empty-flag-20180517-ju_trimmed_single_summary_subtype.tsv
630 B
Cutadapt (single-end)
fastqc
Directory
report.txt
692 B
nudt16l1-loop-20180517-ju_trimmed.fastq.gz
93.46 MB
nudt16l1-loop-20180517-ju_trimmed_fastqc.zip
462.68 kB
STAR
nudt16l1-loop-20180517-ju_trimmed_unmapped.out.mate1.fastq.gz
23.51 MB
nudt16l1-loop-20180517-ju_trimmed.bam
275.68 MB
nudt16l1-loop-20180517-ju_trimmed_SJ.out.tab
747.55 kB
nudt16l1-loop-20180517-ju_trimmed.bam.bai
3.95 MB
nudt16l1-loop-20180517-ju_trimmed_stats.txt
1.81 kB
nudt16l1-loop-20180517-ju_trimmed.bw
114.48 kB
iCount xlsites
nudt16l1-loop-20180517-ju_trimmed_skipped.bam
3.27 kB
nudt16l1-loop-20180517-ju_trimmed_singleAndMulti.bed.gz
14.99 MB
nudt16l1-loop-20180517-ju_trimmed_single.bed.gz
5.62 MB
nudt16l1-loop-20180517-ju_trimmed_single.bedgraph
25.26 MB
iCount summary
nudt16l1-loop-20180517-ju_trimmed_single_summary_type.tsv
272 B
nudt16l1-loop-20180517-ju_trimmed_single_summary_subtype.tsv
654 B
nudt16l1-loop-20180517-ju_trimmed_single_summary_gene.tsv
1.34 MB
iCount peaks
nudt16l1-oht-20180517-ju_trimmed_single_peaks.bed.gz
854.62 kB
nudt16l1-oht-20180517-ju_trimmed_single_scores.tsv.gz
6.51 MB
nudt16l1-oht-20180517-ju_trimmed_single_peaks.bedgraph
3.22 MB
iCount peaks
nudt16l1-2-20180517-ju_trimmed_single_peaks.bed.gz
739.34 kB
nudt16l1-2-20180517-ju_trimmed_single_peaks.bedgraph
2.59 MB
nudt16l1-2-20180517-ju_trimmed_single_scores.tsv.gz
6.91 MB
iCount peaks
tp53bp1-m-wt-oht-20180517-ju_trimmed_single_peaks.bed.gz
155.32 kB
tp53bp1-m-wt-oht-20180517-ju_trimmed_single_peaks.bedgraph
318.33 kB
tp53bp1-m-wt-oht-20180517-ju_trimmed_single_scores.tsv.gz
575.91 kB
iCount peaks
tp53bp1-m-1-20180517-ju_trimmed_single_peaks.bed.gz
103.29 kB
tp53bp1-m-1-20180517-ju_trimmed_single_scores.tsv.gz
2.79 MB
tp53bp1-m-1-20180517-ju_trimmed_single_peaks.bedgraph
263.78 kB
iCount group
TIRR_with_damage_grouped_cdna.bed.gz
7.89 MB
TIRR_with_damage_grouped_cdna.bedgraph
35.99 MB
K-mers
TIRR_without_damage_grouped_cdna.tar.gz
9.23 MB
K-mers
Controls_with_damage_grouped_cdna.tar.gz
2.43 MB
iCount group
TIRR_without_damage_grouped_cdna.bedgraph
136.75 MB
TIRR_without_damage_grouped_cdna.bed.gz
29.36 MB
iCount annotate
TIRR_without_damage_grouped_cdna_annotated.bed.gz
36.22 MB
TIRR_without_damage_grouped_cdna_annotated.bedgraph
136.75 MB
iCount summary
TIRR_without_damage_grouped_cdna_summary_subtype.tsv
664 B
TIRR_without_damage_grouped_cdna_summary_gene.tsv
1.84 MB
TIRR_without_damage_grouped_cdna_summary_type.tsv
275 B
iCount annotate
TIRR_with_damage_grouped_cdna_annotated.bed.gz
10.30 MB
TIRR_with_damage_grouped_cdna_annotated.bedgraph
35.99 MB
iCount group
Controls_with_damage_grouped_cdna.bed.gz
242.42 kB
Controls_with_damage_grouped_cdna.bedgraph
905.88 kB
iCount annotate
Controls_with_damage_grouped_cdna_annotated.bedgraph
905.88 kB
Controls_with_damage_grouped_cdna_annotated.bed.gz
371.63 kB
iCount summary
Controls_with_damage_grouped_cdna_summary_subtype.tsv
631 B
Controls_with_damage_grouped_cdna_summary_type.tsv
264 B
Controls_with_damage_grouped_cdna_summary_gene.tsv
540.70 kB
iCount RNA-maps
Controls_with_damage_grouped_cdna.tar.gz
514.45 kB
Paraclu
Controls_with_damage_grouped_cdna_peaks.bed.gz
1.87 kB
iCount group
Controls_without_damage_grouped_cdna.bedgraph
8.23 MB
Controls_without_damage_grouped_cdna.bed.gz
1.93 MB
iCount annotate
Controls_without_damage_grouped_cdna_annotated.bedgraph
8.23 MB
Controls_without_damage_grouped_cdna_annotated.bed.gz
2.71 MB
iCount summary
Controls_without_damage_grouped_cdna_summary_gene.tsv
1.05 MB
Controls_without_damage_grouped_cdna_summary_subtype.tsv
645 B
Controls_without_damage_grouped_cdna_summary_type.tsv
269 B
iCount RNA-maps
Controls_without_damage_grouped_cdna.tar.gz
908.25 kB
Paraclu
Controls_without_damage_grouped_cdna_peaks.bed.gz
16.81 kB
K-mers
Controls_without_damage_grouped_cdna.tar.gz
2.81 MB
iCount group
TIRR_LOOP_Merge_grouped_cdna.bedgraph
47.53 MB
TIRR_LOOP_Merge_grouped_cdna.bed.gz
10.46 MB
iCount group
TIRR_10E_Merge_grouped_cdna.bedgraph
70.88 MB
TIRR_10E_Merge_grouped_cdna.bed.gz
15.43 MB
iCount summary
TIRR_with_damage_grouped_cdna_summary_subtype.tsv
658 B
TIRR_with_damage_grouped_cdna_summary_type.tsv
273 B
TIRR_with_damage_grouped_cdna_summary_gene.tsv
1.46 MB
iCount RNA-maps
TIRR_with_damage_grouped_cdna.tar.gz
1.51 MB
Paraclu
TIRR_with_damage_grouped_cdna_peaks.bed.gz
102.85 kB
iCount RNA-maps
TIRR_without_damage_grouped_cdna.tar.gz
2.62 MB
Paraclu
TIRR_without_damage_grouped_cdna_peaks.bed.gz
523.43 kB
K-mers
TIRR_with_damage_grouped_cdna.tar.gz
3.56 MB
Cutadapt (single-end)
report.txt
698 B
fastqc
Directory
tp53bp1-m-1495-oht-20180517-ju_trimmed.fastq.gz
234.09 MB
tp53bp1-m-1495-oht-20180517-ju_trimmed_fastqc.zip
480.48 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
697 B
tp53bp1-m-wt-oht-1-20180517-ju_trimmed_fastqc.zip
476.09 kB
tp53bp1-m-wt-oht-1-20180517-ju_trimmed.fastq.gz
40.20 MB