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Folder iconHypro-Seq asynchronous 45S-47S-Malat1

Miha Modic
March 11, 2022

MOD4690A1_S176

FASTQ file (paired-end)
MOD4690A1_S176_L001_R1_001.fastq.gz
1.02 GB
MOD4690A1_S176_L002_R1_001.fastq.gz
1.03 GB
MOD4690A1_S176_L001_R2_001.fastq.gz
1.01 GB
MOD4690A1_S176_L002_R2_001.fastq.gz
1.01 GB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A1_S176_L001_R1_001_fastqc.zip
859.33 kB
MOD4690A1_S176_L001_R2_001_fastqc.zip
866.76 kB
MOD4690A1_S176_L002_R1_001_fastqc.zip
865.90 kB
MOD4690A1_S176_L002_R2_001_fastqc.zip
870.46 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A1_S176_L001_R1_001_preprocessed.fastq.gz
949.52 MB
MOD4690A1_S176_L001_R2_001_preprocessed.fastq.gz
950.69 MB
MOD4690A1_S176_L001_R1_001_statistics.txt.gz
1.05 kB
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.fastq.gz
30.12 MB
MOD4690A1_S176_L001_R2_001_preprocessed_downsampled.fastq.gz
30.16 MB
fastqc
Directory
STAR
MOD4690A1_S176_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
491.17 MB
MOD4690A1_S176_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
493.94 MB
MOD4690A1_S176_L001_R1_001_preprocessed.bam.bai
4.20 MB
MOD4690A1_S176_L001_R1_001_preprocessed.bam
1.25 GB
MOD4690A1_S176_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A1_S176_L001_R1_001_preprocessed_SJ.out.tab
1.02 MB
STAR
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
11.98 MB
MOD4690A1_S176_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
12.02 MB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.bam.bai
57.79 kB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.bam
45.63 MB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_SJ.out.tab
123.58 kB
STAR
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
29.75 MB
MOD4690A1_S176_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
29.78 MB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
featureCounts
results
Directory
featureCounts_rc.txt.summary
360 B
MOD4690A1_S176_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.62 MB
MOD4690A1_S176_L001_R1_001_preprocessed_rc.tab.gz
205.83 kB
MOD4690A1_S176_L001_R1_001_preprocessed_tpm.tab.gz
315.31 kB
MOD4690A1_S176_L001_R1_001_preprocessed_cpm.tab.gz
232.91 kB
MOD4690A1_S176_L001_R1_001_preprocessed_expressions.txt.gz
610.12 kB

MOD4690A4_S179

FASTQ file (paired-end)
MOD4690A4_S179_L001_R1_001.fastq.gz
561.60 MB
MOD4690A4_S179_L002_R1_001.fastq.gz
561.77 MB
MOD4690A4_S179_L001_R2_001.fastq.gz
565.79 MB
MOD4690A4_S179_L002_R2_001.fastq.gz
562.34 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A4_S179_L001_R1_001_fastqc.zip
825.30 kB
MOD4690A4_S179_L001_R2_001_fastqc.zip
837.90 kB
MOD4690A4_S179_L002_R1_001_fastqc.zip
829.43 kB
MOD4690A4_S179_L002_R2_001_fastqc.zip
841.01 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
BBDuk (paired-end)
MOD4690A4_S179_L001_R1_001_preprocessed.fastq.gz
671.80 MB
MOD4690A4_S179_L001_R2_001_preprocessed.fastq.gz
659.26 MB
MOD4690A4_S179_L001_R1_001_statistics.txt.gz
851 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.fastq.gz
35.79 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled.fastq.gz
35.20 MB
fastqc
Directory
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
100.85 MB
MOD4690A4_S179_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
98.93 MB
MOD4690A4_S179_L001_R1_001_preprocessed.bam.bai
4.03 MB
MOD4690A4_S179_L001_R1_001_preprocessed.bam
1.62 GB
MOD4690A4_S179_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A4_S179_L001_R1_001_preprocessed_SJ.out.tab
4.73 MB
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
16.05 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
16.05 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam.bai
63.85 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam
48.46 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_SJ.out.tab
164.08 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A4_S179_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A4_S179_L001_R1_001_preprocessed_rc.tab.gz
221.16 kB
MOD4690A4_S179_L001_R1_001_preprocessed_tpm.tab.gz
396.43 kB
MOD4690A4_S179_L001_R1_001_preprocessed_cpm.tab.gz
281.04 kB
MOD4690A4_S179_L001_R1_001_preprocessed_expressions.txt.gz
754.08 kB
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.44 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.84 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB

MOD4690A3_S178

FASTQ file (paired-end)
MOD4690A3_S178_L001_R1_001.fastq.gz
533.14 MB
MOD4690A3_S178_L002_R1_001.fastq.gz
534.17 MB
MOD4690A3_S178_L001_R2_001.fastq.gz
545.59 MB
MOD4690A3_S178_L002_R2_001.fastq.gz
543.28 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A3_S178_L001_R1_001_fastqc.zip
814.25 kB
MOD4690A3_S178_L001_R2_001_fastqc.zip
841.24 kB
MOD4690A3_S178_L002_R1_001_fastqc.zip
820.54 kB
MOD4690A3_S178_L002_R2_001_fastqc.zip
843.03 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A3_S178_L001_R1_001_preprocessed.fastq.gz
662.24 MB
MOD4690A3_S178_L001_R2_001_preprocessed.fastq.gz
652.93 MB
MOD4690A3_S178_L001_R1_001_statistics.txt.gz
860 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.fastq.gz
36.22 MB
MOD4690A3_S178_L001_R2_001_preprocessed_downsampled.fastq.gz
35.74 MB
fastqc
Directory
STAR
MOD4690A3_S178_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
86.43 MB
MOD4690A3_S178_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
85.14 MB
MOD4690A3_S178_L001_R1_001_preprocessed.bam.bai
3.91 MB
MOD4690A3_S178_L001_R1_001_preprocessed.bam
1.58 GB
MOD4690A3_S178_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A3_S178_L001_R1_001_preprocessed_SJ.out.tab
4.65 MB
STAR
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
16.07 MB
MOD4690A3_S178_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
16.11 MB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam.bai
65.02 kB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam
49.35 MB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_SJ.out.tab
165.39 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A3_S178_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A3_S178_L001_R1_001_preprocessed_rc.tab.gz
220.91 kB
MOD4690A3_S178_L001_R1_001_preprocessed_tpm.tab.gz
390.85 kB
MOD4690A3_S178_L001_R1_001_preprocessed_cpm.tab.gz
280.56 kB
MOD4690A3_S178_L001_R1_001_preprocessed_expressions.txt.gz
747.65 kB
STAR
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.82 MB
MOD4690A3_S178_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
35.38 MB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A10_S185

FASTQ file (paired-end)
MOD4690A10_S185_L001_R1_001.fastq.gz
598.95 MB
MOD4690A10_S185_L002_R1_001.fastq.gz
599.80 MB
MOD4690A10_S185_L001_R2_001.fastq.gz
607.34 MB
MOD4690A10_S185_L002_R2_001.fastq.gz
604.34 MB
fastqc
Directory
stderr.txt
4.75 kB
MOD4690A10_S185_L001_R1_001_fastqc.zip
822.79 kB
MOD4690A10_S185_L001_R2_001_fastqc.zip
849.30 kB
MOD4690A10_S185_L002_R1_001_fastqc.zip
834.61 kB
MOD4690A10_S185_L002_R2_001_fastqc.zip
848.57 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A10_S185_L001_R1_001_preprocessed.fastq.gz
682.79 MB
MOD4690A10_S185_L001_R2_001_preprocessed.fastq.gz
667.25 MB
MOD4690A10_S185_L001_R1_001_statistics.txt.gz
890 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.fastq.gz
34.82 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled.fastq.gz
34.11 MB
fastqc
Directory
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
109.04 MB
MOD4690A10_S185_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
107.23 MB
MOD4690A10_S185_L001_R1_001_preprocessed.bam.bai
3.99 MB
MOD4690A10_S185_L001_R1_001_preprocessed.bam
1.69 GB
MOD4690A10_S185_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A10_S185_L001_R1_001_preprocessed_SJ.out.tab
4.74 MB
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
13.78 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
13.77 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam.bai
68.85 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam
52.38 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_SJ.out.tab
173.51 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
361 B
MOD4690A10_S185_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A10_S185_L001_R1_001_preprocessed_rc.tab.gz
219.84 kB
MOD4690A10_S185_L001_R1_001_preprocessed_tpm.tab.gz
390.83 kB
MOD4690A10_S185_L001_R1_001_preprocessed_cpm.tab.gz
277.49 kB
MOD4690A10_S185_L001_R1_001_preprocessed_expressions.txt.gz
743.71 kB
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
34.39 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
33.74 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam
617 B
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A2_S177

FASTQ file (paired-end)
MOD4690A2_S177_L001_R1_001.fastq.gz
577.00 MB
MOD4690A2_S177_L002_R1_001.fastq.gz
579.11 MB
MOD4690A2_S177_L001_R2_001.fastq.gz
585.65 MB
MOD4690A2_S177_L002_R2_001.fastq.gz
584.63 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A2_S177_L001_R1_001_fastqc.zip
828.92 kB
MOD4690A2_S177_L001_R2_001_fastqc.zip
849.20 kB
MOD4690A2_S177_L002_R1_001_fastqc.zip
834.62 kB
MOD4690A2_S177_L002_R2_001_fastqc.zip
851.54 kB
Samtools idxstats
idxstat_report.txt
1.47 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A2_S177_L001_R1_001_preprocessed.fastq.gz
639.93 MB
MOD4690A2_S177_L001_R2_001_preprocessed.fastq.gz
634.08 MB
MOD4690A2_S177_L001_R1_001_statistics.txt.gz
1006 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.fastq.gz
34.71 MB
MOD4690A2_S177_L001_R2_001_preprocessed_downsampled.fastq.gz
34.41 MB
fastqc
Directory
STAR
MOD4690A2_S177_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
199.61 MB
MOD4690A2_S177_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
199.34 MB
MOD4690A2_S177_L001_R1_001_preprocessed.bam.bai
4.17 MB
MOD4690A2_S177_L001_R1_001_preprocessed.bam
1.23 GB
MOD4690A2_S177_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A2_S177_L001_R1_001_preprocessed_SJ.out.tab
2.65 MB
STAR
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.66 MB
MOD4690A2_S177_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.67 MB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam.bai
55.19 kB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam
40.51 MB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_SJ.out.tab
149.74 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A2_S177_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A2_S177_L001_R1_001_preprocessed_rc.tab.gz
217.55 kB
MOD4690A2_S177_L001_R1_001_preprocessed_tpm.tab.gz
388.15 kB
MOD4690A2_S177_L001_R1_001_preprocessed_cpm.tab.gz
261.12 kB
MOD4690A2_S177_L001_R1_001_preprocessed_expressions.txt.gz
723.44 kB
STAR
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
34.35 MB
MOD4690A2_S177_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.05 MB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A5_S180

FASTQ file (paired-end)
MOD4690A5_S180_L001_R1_001.fastq.gz
483.92 MB
MOD4690A5_S180_L002_R1_001.fastq.gz
485.14 MB
MOD4690A5_S180_L001_R2_001.fastq.gz
492.75 MB
MOD4690A5_S180_L002_R2_001.fastq.gz
490.90 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A5_S180_L001_R1_001_fastqc.zip
824.35 kB
MOD4690A5_S180_L001_R2_001_fastqc.zip
841.84 kB
MOD4690A5_S180_L002_R1_001_fastqc.zip
831.61 kB
MOD4690A5_S180_L002_R2_001_fastqc.zip
837.44 kB
Samtools idxstats
idxstat_report.txt
1.46 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A5_S180_L001_R1_001_preprocessed.fastq.gz
573.61 MB
MOD4690A5_S180_L001_R2_001_preprocessed.fastq.gz
567.60 MB
MOD4690A5_S180_L001_R1_001_statistics.txt.gz
850 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.fastq.gz
36.01 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled.fastq.gz
35.65 MB
fastqc
Directory
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
87.40 MB
MOD4690A5_S180_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
86.66 MB
MOD4690A5_S180_L001_R1_001_preprocessed.bam.bai
4.02 MB
MOD4690A5_S180_L001_R1_001_preprocessed.bam
1.42 GB
MOD4690A5_S180_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A5_S180_L001_R1_001_preprocessed_SJ.out.tab
4.45 MB
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.27 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.32 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam.bai
60.09 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam
45.95 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_SJ.out.tab
156.42 kB
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.64 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
35.32 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A5_S180_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A5_S180_L001_R1_001_preprocessed_rc.tab.gz
222.04 kB
MOD4690A5_S180_L001_R1_001_preprocessed_tpm.tab.gz
415.42 kB
MOD4690A5_S180_L001_R1_001_preprocessed_cpm.tab.gz
281.84 kB
MOD4690A5_S180_L001_R1_001_preprocessed_expressions.txt.gz
775.69 kB

MOD4690A7_S182

FASTQ file (paired-end)
MOD4690A7_S182_L001_R1_001.fastq.gz
480.71 MB
MOD4690A7_S182_L002_R1_001.fastq.gz
481.21 MB
MOD4690A7_S182_L001_R2_001.fastq.gz
485.39 MB
MOD4690A7_S182_L002_R2_001.fastq.gz
483.17 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A7_S182_L001_R1_001_fastqc.zip
825.43 kB
MOD4690A7_S182_L001_R2_001_fastqc.zip
836.99 kB
MOD4690A7_S182_L002_R1_001_fastqc.zip
833.70 kB
MOD4690A7_S182_L002_R2_001_fastqc.zip
840.79 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A7_S182_L001_R1_001_preprocessed.fastq.gz
563.64 MB
MOD4690A7_S182_L001_R2_001_preprocessed.fastq.gz
553.87 MB
MOD4690A7_S182_L001_R1_001_statistics.txt.gz
843 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.fastq.gz
35.42 MB
MOD4690A7_S182_L001_R2_001_preprocessed_downsampled.fastq.gz
34.84 MB
fastqc
Directory
STAR
MOD4690A7_S182_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
79.87 MB
MOD4690A7_S182_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
78.62 MB
MOD4690A7_S182_L001_R1_001_preprocessed.bam.bai
3.81 MB
MOD4690A7_S182_L001_R1_001_preprocessed.bam
1.44 GB
MOD4690A7_S182_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A7_S182_L001_R1_001_preprocessed_SJ.out.tab
4.31 MB
STAR
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
15.52 MB
MOD4690A7_S182_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
15.53 MB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.bam.bai
63.68 kB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.bam
49.62 MB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_SJ.out.tab
162.65 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A7_S182_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A7_S182_L001_R1_001_preprocessed_rc.tab.gz
219.55 kB
MOD4690A7_S182_L001_R1_001_preprocessed_tpm.tab.gz
393.10 kB
MOD4690A7_S182_L001_R1_001_preprocessed_cpm.tab.gz
274.76 kB
MOD4690A7_S182_L001_R1_001_preprocessed_expressions.txt.gz
743.45 kB
STAR
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.06 MB
MOD4690A7_S182_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.52 MB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A8_S183

FASTQ file (paired-end)
MOD4690A8_S183_L001_R1_001.fastq.gz
457.90 MB
MOD4690A8_S183_L002_R1_001.fastq.gz
458.02 MB
MOD4690A8_S183_L001_R2_001.fastq.gz
460.74 MB
MOD4690A8_S183_L002_R2_001.fastq.gz
458.40 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A8_S183_L001_R1_001_fastqc.zip
825.81 kB
MOD4690A8_S183_L001_R2_001_fastqc.zip
837.62 kB
MOD4690A8_S183_L002_R1_001_fastqc.zip
831.58 kB
MOD4690A8_S183_L002_R2_001_fastqc.zip
842.73 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A8_S183_L001_R1_001_preprocessed.fastq.gz
538.70 MB
MOD4690A8_S183_L001_R2_001_preprocessed.fastq.gz
528.98 MB
MOD4690A8_S183_L001_R1_001_statistics.txt.gz
823 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.fastq.gz
35.91 MB
MOD4690A8_S183_L001_R2_001_preprocessed_downsampled.fastq.gz
35.31 MB
fastqc
Directory
STAR
MOD4690A8_S183_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
80.82 MB
MOD4690A8_S183_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
79.68 MB
MOD4690A8_S183_L001_R1_001_preprocessed.bam.bai
3.59 MB
MOD4690A8_S183_L001_R1_001_preprocessed.bam
1.31 GB
MOD4690A8_S183_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A8_S183_L001_R1_001_preprocessed_SJ.out.tab
4.35 MB
STAR
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
15.84 MB
MOD4690A8_S183_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
15.86 MB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.bam.bai
63.62 kB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.bam
49.05 MB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_SJ.out.tab
165.67 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A8_S183_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A8_S183_L001_R1_001_preprocessed_rc.tab.gz
219.59 kB
MOD4690A8_S183_L001_R1_001_preprocessed_tpm.tab.gz
392.67 kB
MOD4690A8_S183_L001_R1_001_preprocessed_cpm.tab.gz
274.97 kB
MOD4690A8_S183_L001_R1_001_preprocessed_expressions.txt.gz
743.37 kB
STAR
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.53 MB
MOD4690A8_S183_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.98 MB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A6_S181

FASTQ file (paired-end)
MOD4690A6_S181_L001_R1_001.fastq.gz
473.68 MB
MOD4690A6_S181_L002_R1_001.fastq.gz
474.13 MB
MOD4690A6_S181_L001_R2_001.fastq.gz
481.34 MB
MOD4690A6_S181_L002_R2_001.fastq.gz
478.88 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A6_S181_L001_R1_001_fastqc.zip
823.72 kB
MOD4690A6_S181_L001_R2_001_fastqc.zip
839.83 kB
MOD4690A6_S181_L002_R1_001_fastqc.zip
828.72 kB
MOD4690A6_S181_L002_R2_001_fastqc.zip
840.74 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A6_S181_L001_R1_001_preprocessed.fastq.gz
573.79 MB
MOD4690A6_S181_L001_R2_001_preprocessed.fastq.gz
564.35 MB
MOD4690A6_S181_L001_R1_001_statistics.txt.gz
888 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.fastq.gz
36.78 MB
MOD4690A6_S181_L001_R2_001_preprocessed_downsampled.fastq.gz
36.21 MB
fastqc
Directory
STAR
MOD4690A6_S181_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
83.73 MB
MOD4690A6_S181_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
82.28 MB
MOD4690A6_S181_L001_R1_001_preprocessed.bam.bai
3.67 MB
MOD4690A6_S181_L001_R1_001_preprocessed.bam
1.37 GB
MOD4690A6_S181_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A6_S181_L001_R1_001_preprocessed_SJ.out.tab
4.56 MB
STAR
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.36 MB
MOD4690A6_S181_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.38 MB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam.bai
61.32 kB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam
46.67 MB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_SJ.out.tab
160.44 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A6_S181_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A6_S181_L001_R1_001_preprocessed_rc.tab.gz
220.97 kB
MOD4690A6_S181_L001_R1_001_preprocessed_tpm.tab.gz
400.26 kB
MOD4690A6_S181_L001_R1_001_preprocessed_cpm.tab.gz
279.25 kB
MOD4690A6_S181_L001_R1_001_preprocessed_expressions.txt.gz
756.47 kB
STAR
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
36.38 MB
MOD4690A6_S181_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
35.86 MB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

MOD4690A9_S184

FASTQ file (paired-end)
MOD4690A9_S184_L001_R1_001.fastq.gz
497.48 MB
MOD4690A9_S184_L002_R1_001.fastq.gz
499.59 MB
MOD4690A9_S184_L001_R2_001.fastq.gz
513.99 MB
MOD4690A9_S184_L002_R2_001.fastq.gz
513.26 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A9_S184_L001_R1_001_fastqc.zip
827.90 kB
MOD4690A9_S184_L001_R2_001_fastqc.zip
854.78 kB
MOD4690A9_S184_L002_R1_001_fastqc.zip
830.74 kB
MOD4690A9_S184_L002_R2_001_fastqc.zip
852.14 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A9_S184_L001_R1_001_preprocessed.fastq.gz
559.81 MB
MOD4690A9_S184_L001_R2_001_preprocessed.fastq.gz
555.37 MB
MOD4690A9_S184_L001_R1_001_statistics.txt.gz
920 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.fastq.gz
35.27 MB
MOD4690A9_S184_L001_R2_001_preprocessed_downsampled.fastq.gz
35.01 MB
fastqc
Directory
STAR
MOD4690A9_S184_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
88.28 MB
MOD4690A9_S184_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
87.82 MB
MOD4690A9_S184_L001_R1_001_preprocessed.bam.bai
3.64 MB
MOD4690A9_S184_L001_R1_001_preprocessed.bam
1.35 GB
MOD4690A9_S184_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A9_S184_L001_R1_001_preprocessed_SJ.out.tab
3.58 MB
STAR
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.61 MB
MOD4690A9_S184_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.66 MB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.bam.bai
54.66 kB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.bam
43.52 MB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_SJ.out.tab
128.33 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A9_S184_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A9_S184_L001_R1_001_preprocessed_rc.tab.gz
218.75 kB
MOD4690A9_S184_L001_R1_001_preprocessed_tpm.tab.gz
377.88 kB
MOD4690A9_S184_L001_R1_001_preprocessed_cpm.tab.gz
273.48 kB
MOD4690A9_S184_L001_R1_001_preprocessed_expressions.txt.gz
725.95 kB
STAR
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
34.95 MB
MOD4690A9_S184_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.68 MB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B

No Sample

FASTQ file (paired-end)
MOD4690A5_S180_L001_R1_001.fastq.gz
483.92 MB
MOD4690A5_S180_L002_R1_001.fastq.gz
485.14 MB
MOD4690A5_S180_L001_R2_001.fastq.gz
492.75 MB
MOD4690A5_S180_L002_R2_001.fastq.gz
490.90 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A5_S180_L001_R1_001_fastqc.zip
824.35 kB
MOD4690A5_S180_L001_R2_001_fastqc.zip
841.84 kB
MOD4690A5_S180_L002_R1_001_fastqc.zip
831.61 kB
MOD4690A5_S180_L002_R2_001_fastqc.zip
837.44 kB
FASTQ file (paired-end)
MOD4690A2_S177_L001_R1_001.fastq.gz
577.00 MB
MOD4690A2_S177_L002_R1_001.fastq.gz
579.11 MB
MOD4690A2_S177_L001_R2_001.fastq.gz
585.65 MB
MOD4690A2_S177_L002_R2_001.fastq.gz
584.63 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A2_S177_L001_R1_001_fastqc.zip
828.92 kB
MOD4690A2_S177_L001_R2_001_fastqc.zip
849.20 kB
MOD4690A2_S177_L002_R1_001_fastqc.zip
834.62 kB
MOD4690A2_S177_L002_R2_001_fastqc.zip
851.54 kB
FASTQ file (paired-end)
MOD4690A10_S185_L001_R1_001.fastq.gz
598.95 MB
MOD4690A10_S185_L002_R1_001.fastq.gz
599.80 MB
MOD4690A10_S185_L001_R2_001.fastq.gz
607.34 MB
MOD4690A10_S185_L002_R2_001.fastq.gz
604.34 MB
fastqc
Directory
stderr.txt
4.75 kB
MOD4690A10_S185_L001_R1_001_fastqc.zip
822.79 kB
MOD4690A10_S185_L001_R2_001_fastqc.zip
849.30 kB
MOD4690A10_S185_L002_R1_001_fastqc.zip
834.61 kB
MOD4690A10_S185_L002_R2_001_fastqc.zip
848.57 kB
FASTQ file (paired-end)
MOD4690A3_S178_L001_R1_001.fastq.gz
533.14 MB
MOD4690A3_S178_L002_R1_001.fastq.gz
534.17 MB
MOD4690A3_S178_L001_R2_001.fastq.gz
545.59 MB
MOD4690A3_S178_L002_R2_001.fastq.gz
543.28 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A3_S178_L001_R1_001_fastqc.zip
814.25 kB
MOD4690A3_S178_L001_R2_001_fastqc.zip
841.24 kB
MOD4690A3_S178_L002_R1_001_fastqc.zip
820.54 kB
MOD4690A3_S178_L002_R2_001_fastqc.zip
843.03 kB
FASTQ file (paired-end)
MOD4690A7_S182_L001_R1_001.fastq.gz
480.71 MB
MOD4690A7_S182_L002_R1_001.fastq.gz
481.21 MB
MOD4690A7_S182_L001_R2_001.fastq.gz
485.39 MB
MOD4690A7_S182_L002_R2_001.fastq.gz
483.17 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A7_S182_L001_R1_001_fastqc.zip
825.43 kB
MOD4690A7_S182_L001_R2_001_fastqc.zip
836.99 kB
MOD4690A7_S182_L002_R1_001_fastqc.zip
833.70 kB
MOD4690A7_S182_L002_R2_001_fastqc.zip
840.79 kB
FASTQ file (paired-end)
MOD4690A6_S181_L001_R1_001.fastq.gz
473.68 MB
MOD4690A6_S181_L002_R1_001.fastq.gz
474.13 MB
MOD4690A6_S181_L001_R2_001.fastq.gz
481.34 MB
MOD4690A6_S181_L002_R2_001.fastq.gz
478.88 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A6_S181_L001_R1_001_fastqc.zip
823.72 kB
MOD4690A6_S181_L001_R2_001_fastqc.zip
839.83 kB
MOD4690A6_S181_L002_R1_001_fastqc.zip
828.72 kB
MOD4690A6_S181_L002_R2_001_fastqc.zip
840.74 kB
FASTQ file (paired-end)
MOD4690A4_S179_L001_R1_001.fastq.gz
561.60 MB
MOD4690A4_S179_L002_R1_001.fastq.gz
561.77 MB
MOD4690A4_S179_L001_R2_001.fastq.gz
565.79 MB
MOD4690A4_S179_L002_R2_001.fastq.gz
562.34 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A4_S179_L001_R1_001_fastqc.zip
825.30 kB
MOD4690A4_S179_L001_R2_001_fastqc.zip
837.90 kB
MOD4690A4_S179_L002_R1_001_fastqc.zip
829.43 kB
MOD4690A4_S179_L002_R2_001_fastqc.zip
841.01 kB
FASTQ file (paired-end)
MOD4690A9_S184_L001_R1_001.fastq.gz
497.48 MB
MOD4690A9_S184_L002_R1_001.fastq.gz
499.59 MB
MOD4690A9_S184_L001_R2_001.fastq.gz
513.99 MB
MOD4690A9_S184_L002_R2_001.fastq.gz
513.26 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A9_S184_L001_R1_001_fastqc.zip
827.90 kB
MOD4690A9_S184_L001_R2_001_fastqc.zip
854.78 kB
MOD4690A9_S184_L002_R1_001_fastqc.zip
830.74 kB
MOD4690A9_S184_L002_R2_001_fastqc.zip
852.14 kB
FASTQ file (paired-end)
MOD4690A1_S176_L001_R1_001.fastq.gz
1.02 GB
MOD4690A1_S176_L002_R1_001.fastq.gz
1.03 GB
MOD4690A1_S176_L001_R2_001.fastq.gz
1.01 GB
MOD4690A1_S176_L002_R2_001.fastq.gz
1.01 GB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A1_S176_L001_R1_001_fastqc.zip
859.33 kB
MOD4690A1_S176_L001_R2_001_fastqc.zip
866.76 kB
MOD4690A1_S176_L002_R1_001_fastqc.zip
865.90 kB
MOD4690A1_S176_L002_R2_001_fastqc.zip
870.46 kB
FASTQ file (paired-end)
MOD4690A8_S183_L001_R1_001.fastq.gz
457.90 MB
MOD4690A8_S183_L002_R1_001.fastq.gz
458.02 MB
MOD4690A8_S183_L001_R2_001.fastq.gz
460.74 MB
MOD4690A8_S183_L002_R2_001.fastq.gz
458.40 MB
fastqc
Directory
stderr.txt
4.67 kB
MOD4690A8_S183_L001_R1_001_fastqc.zip
825.81 kB
MOD4690A8_S183_L001_R2_001_fastqc.zip
837.62 kB
MOD4690A8_S183_L002_R1_001_fastqc.zip
831.58 kB
MOD4690A8_S183_L002_R2_001_fastqc.zip
842.73 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
Samtools idxstats
idxstat_report.txt
1.46 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
Samtools idxstats
idxstat_report.txt
1.44 kB
Samtools idxstats
idxstat_report.txt
1.47 kB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
Samtools idxstats
idxstat_report.txt
1.44 kB
MultiQC
multiqc_data
Directory
multiqc_report.html
1.28 MB
BBDuk (paired-end)
MOD4690A5_S180_L001_R1_001_preprocessed.fastq.gz
573.61 MB
MOD4690A5_S180_L001_R2_001_preprocessed.fastq.gz
567.60 MB
MOD4690A5_S180_L001_R1_001_statistics.txt.gz
850 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A4_S179_L001_R1_001_preprocessed.fastq.gz
671.80 MB
MOD4690A4_S179_L001_R2_001_preprocessed.fastq.gz
659.26 MB
MOD4690A4_S179_L001_R1_001_statistics.txt.gz
851 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A10_S185_L001_R1_001_preprocessed.fastq.gz
682.79 MB
MOD4690A10_S185_L001_R2_001_preprocessed.fastq.gz
667.25 MB
MOD4690A10_S185_L001_R1_001_statistics.txt.gz
890 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A6_S181_L001_R1_001_preprocessed.fastq.gz
573.79 MB
MOD4690A6_S181_L001_R2_001_preprocessed.fastq.gz
564.35 MB
MOD4690A6_S181_L001_R1_001_statistics.txt.gz
888 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A2_S177_L001_R1_001_preprocessed.fastq.gz
639.93 MB
MOD4690A2_S177_L001_R2_001_preprocessed.fastq.gz
634.08 MB
MOD4690A2_S177_L001_R1_001_statistics.txt.gz
1006 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A1_S176_L001_R1_001_preprocessed.fastq.gz
949.52 MB
MOD4690A1_S176_L001_R2_001_preprocessed.fastq.gz
950.69 MB
MOD4690A1_S176_L001_R1_001_statistics.txt.gz
1.05 kB
fastqc
Directory
BBDuk (paired-end)
MOD4690A7_S182_L001_R1_001_preprocessed.fastq.gz
563.64 MB
MOD4690A7_S182_L001_R2_001_preprocessed.fastq.gz
553.87 MB
MOD4690A7_S182_L001_R1_001_statistics.txt.gz
843 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A3_S178_L001_R1_001_preprocessed.fastq.gz
662.24 MB
MOD4690A3_S178_L001_R2_001_preprocessed.fastq.gz
652.93 MB
MOD4690A3_S178_L001_R1_001_statistics.txt.gz
860 B
fastqc
Directory
BBDuk (paired-end)
MOD4690A9_S184_L001_R1_001_preprocessed.fastq.gz
559.81 MB
MOD4690A9_S184_L001_R2_001_preprocessed.fastq.gz
555.37 MB
MOD4690A9_S184_L001_R1_001_statistics.txt.gz
920 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.fastq.gz
36.01 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled.fastq.gz
35.65 MB
fastqc
Directory
BBDuk (paired-end)
MOD4690A8_S183_L001_R1_001_preprocessed.fastq.gz
538.70 MB
MOD4690A8_S183_L001_R2_001_preprocessed.fastq.gz
528.98 MB
MOD4690A8_S183_L001_R1_001_statistics.txt.gz
823 B
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.fastq.gz
35.79 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled.fastq.gz
35.20 MB
fastqc
Directory
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
87.40 MB
MOD4690A5_S180_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
86.66 MB
MOD4690A5_S180_L001_R1_001_preprocessed.bam.bai
4.02 MB
MOD4690A5_S180_L001_R1_001_preprocessed.bam
1.42 GB
MOD4690A5_S180_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A5_S180_L001_R1_001_preprocessed_SJ.out.tab
4.45 MB
Subsample FASTQ (paired-end)
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.fastq.gz
34.82 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled.fastq.gz
34.11 MB
fastqc
Directory
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
100.85 MB
MOD4690A4_S179_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
98.93 MB
MOD4690A4_S179_L001_R1_001_preprocessed.bam.bai
4.03 MB
MOD4690A4_S179_L001_R1_001_preprocessed.bam
1.62 GB
MOD4690A4_S179_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A4_S179_L001_R1_001_preprocessed_SJ.out.tab
4.73 MB
Subsample FASTQ (paired-end)
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.fastq.gz
36.78 MB
MOD4690A6_S181_L001_R2_001_preprocessed_downsampled.fastq.gz
36.21 MB
fastqc
Directory
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
109.04 MB
MOD4690A10_S185_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
107.23 MB
MOD4690A10_S185_L001_R1_001_preprocessed.bam.bai
3.99 MB
MOD4690A10_S185_L001_R1_001_preprocessed.bam
1.69 GB
MOD4690A10_S185_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A10_S185_L001_R1_001_preprocessed_SJ.out.tab
4.74 MB
STAR
MOD4690A9_S184_L001_R1_001_preprocessed.bam.bai
3.64 MB
MOD4690A9_S184_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
88.28 MB
MOD4690A9_S184_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
87.82 MB
MOD4690A9_S184_L001_R1_001_preprocessed.bam
1.35 GB
MOD4690A9_S184_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A9_S184_L001_R1_001_preprocessed_SJ.out.tab
3.58 MB
Subsample FASTQ (paired-end)
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.fastq.gz
34.71 MB
MOD4690A2_S177_L001_R2_001_preprocessed_downsampled.fastq.gz
34.41 MB
fastqc
Directory
STAR
MOD4690A6_S181_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
83.73 MB
MOD4690A6_S181_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
82.28 MB
MOD4690A6_S181_L001_R1_001_preprocessed.bam.bai
3.67 MB
MOD4690A6_S181_L001_R1_001_preprocessed.bam
1.37 GB
MOD4690A6_S181_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A6_S181_L001_R1_001_preprocessed_SJ.out.tab
4.56 MB
Subsample FASTQ (paired-end)
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled.fastq.gz
30.12 MB
MOD4690A1_S176_L001_R2_001_preprocessed_downsampled.fastq.gz
30.16 MB
fastqc
Directory
STAR
MOD4690A2_S177_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
199.61 MB
MOD4690A2_S177_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
199.34 MB
MOD4690A2_S177_L001_R1_001_preprocessed.bam.bai
4.17 MB
MOD4690A2_S177_L001_R1_001_preprocessed.bam
1.23 GB
MOD4690A2_S177_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A2_S177_L001_R1_001_preprocessed_SJ.out.tab
2.65 MB
Subsample FASTQ (paired-end)
MOD4690A7_S182_L001_R1_001_preprocessed_downsampled.fastq.gz
35.42 MB
MOD4690A7_S182_L001_R2_001_preprocessed_downsampled.fastq.gz
34.84 MB
fastqc
Directory
Subsample FASTQ (paired-end)
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.fastq.gz
36.22 MB
MOD4690A3_S178_L001_R2_001_preprocessed_downsampled.fastq.gz
35.74 MB
fastqc
Directory
STAR
MOD4690A7_S182_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
79.87 MB
MOD4690A7_S182_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
78.62 MB
MOD4690A7_S182_L001_R1_001_preprocessed.bam.bai
3.81 MB
MOD4690A7_S182_L001_R1_001_preprocessed.bam
1.44 GB
MOD4690A7_S182_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A7_S182_L001_R1_001_preprocessed_SJ.out.tab
4.31 MB
STAR
MOD4690A3_S178_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
86.43 MB
MOD4690A3_S178_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
85.14 MB
MOD4690A3_S178_L001_R1_001_preprocessed.bam.bai
3.91 MB
MOD4690A3_S178_L001_R1_001_preprocessed.bam
1.58 GB
MOD4690A3_S178_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A3_S178_L001_R1_001_preprocessed_SJ.out.tab
4.65 MB
STAR
MOD4690A1_S176_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
491.17 MB
MOD4690A1_S176_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
493.94 MB
MOD4690A1_S176_L001_R1_001_preprocessed.bam.bai
4.20 MB
MOD4690A1_S176_L001_R1_001_preprocessed.bam
1.25 GB
MOD4690A1_S176_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A1_S176_L001_R1_001_preprocessed_SJ.out.tab
1.02 MB
Subsample FASTQ (paired-end)
MOD4690A9_S184_L001_R1_001_preprocessed_downsampled.fastq.gz
35.27 MB
MOD4690A9_S184_L001_R2_001_preprocessed_downsampled.fastq.gz
35.01 MB
fastqc
Directory
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.27 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.32 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam.bai
60.09 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam
45.95 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_SJ.out.tab
156.42 kB
Subsample FASTQ (paired-end)
MOD4690A8_S183_L001_R1_001_preprocessed_downsampled.fastq.gz
35.91 MB
MOD4690A8_S183_L001_R2_001_preprocessed_downsampled.fastq.gz
35.31 MB
fastqc
Directory
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
16.05 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
16.05 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam.bai
63.85 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam
48.46 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_SJ.out.tab
164.08 kB
STAR
MOD4690A8_S183_L001_R1_001_preprocessed_unmapped.out.mate1.fastq.gz
80.82 MB
MOD4690A8_S183_L001_R2_001_preprocessed_unmapped.out.mate2.fastq.gz
79.68 MB
MOD4690A8_S183_L001_R1_001_preprocessed.bam.bai
3.59 MB
MOD4690A8_S183_L001_R1_001_preprocessed.bam
1.31 GB
MOD4690A8_S183_L001_R1_001_preprocessed_stats.txt
1.82 kB
MOD4690A8_S183_L001_R1_001_preprocessed_SJ.out.tab
4.35 MB
STAR
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.64 MB
MOD4690A5_S180_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
35.32 MB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A5_S180_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
13.78 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
13.77 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam.bai
68.85 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam
52.38 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_SJ.out.tab
173.51 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A5_S180_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A5_S180_L001_R1_001_preprocessed_rc.tab.gz
222.04 kB
MOD4690A5_S180_L001_R1_001_preprocessed_tpm.tab.gz
415.42 kB
MOD4690A5_S180_L001_R1_001_preprocessed_cpm.tab.gz
281.84 kB
MOD4690A5_S180_L001_R1_001_preprocessed_expressions.txt.gz
775.69 kB
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A4_S179_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A4_S179_L001_R1_001_preprocessed_rc.tab.gz
221.16 kB
MOD4690A4_S179_L001_R1_001_preprocessed_tpm.tab.gz
396.43 kB
MOD4690A4_S179_L001_R1_001_preprocessed_cpm.tab.gz
281.04 kB
MOD4690A4_S179_L001_R1_001_preprocessed_expressions.txt.gz
754.08 kB
STAR
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.36 MB
MOD4690A6_S181_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.38 MB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam.bai
61.32 kB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled.bam
46.67 MB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A6_S181_L001_R1_001_preprocessed_downsampled_SJ.out.tab
160.44 kB
STAR
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.44 MB
MOD4690A4_S179_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
34.84 MB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A4_S179_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
featureCounts
results
Directory
featureCounts_rc.txt.summary
361 B
MOD4690A10_S185_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.63 MB
MOD4690A10_S185_L001_R1_001_preprocessed_rc.tab.gz
219.84 kB
MOD4690A10_S185_L001_R1_001_preprocessed_tpm.tab.gz
390.83 kB
MOD4690A10_S185_L001_R1_001_preprocessed_cpm.tab.gz
277.49 kB
MOD4690A10_S185_L001_R1_001_preprocessed_expressions.txt.gz
743.71 kB
STAR
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam
616 B
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
35.82 MB
MOD4690A3_S178_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
35.38 MB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A3_S178_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
STAR
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
17.66 MB
MOD4690A2_S177_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
17.67 MB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam.bai
55.19 kB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled.bam
40.51 MB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_stats.txt
1.80 kB
MOD4690A2_S177_L001_R1_001_preprocessed_downsampled_SJ.out.tab
149.74 kB
STAR
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
34.39 MB
MOD4690A10_S185_L001_R2_001_preprocessed_downsampled_unmapped.out.mate2.fastq.gz
33.74 MB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam.bai
56 B
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled.bam
617 B
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_stats.txt
1.77 kB
MOD4690A10_S185_L001_R1_001_preprocessed_downsampled_SJ.out.tab
0 B
featureCounts
results
Directory
featureCounts_rc.txt.summary
359 B
MOD4690A6_S181_L001_R1_001_preprocessed_featureCounts_rc.txt.gz
3.64 MB
MOD4690A6_S181_L001_R1_001_preprocessed_rc.tab.gz
220.97 kB
MOD4690A6_S181_L001_R1_001_preprocessed_tpm.tab.gz
400.26 kB
MOD4690A6_S181_L001_R1_001_preprocessed_cpm.tab.gz
279.25 kB
MOD4690A6_S181_L001_R1_001_preprocessed_expressions.txt.gz
756.47 kB
STAR
MOD4690A1_S176_L001_R1_001_preprocessed_downsampled_unmapped.out.mate1.fastq.gz
11.98 MB
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