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Folder iconHNRNPA2B1 test upload 2015

Klara Kuret
March 6, 2022
HNRNPA2B1 test upload 2015

iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNAGGGNN_20151023_JU1_5_renamed.fastq.gz

FASTQ file (single-end)
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNAGGGNN_20151023_JU1_5_renamed.fastq.gz
752.99 MB
fastqc
Directory
stderr.txt
2.03 kB
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNAGGGNN_20151023_JU1_5_renamed_fastqc.zip
541.13 kB

iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNATCGNN_20151023_JU1_6_renamed.fastq.gz

FASTQ file (single-end)
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNATCGNN_20151023_JU1_6_renamed.fastq.gz
92.32 MB
fastqc
Directory
stderr.txt
2.03 kB
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNATCGNN_20151023_JU1_6_renamed_fastqc.zip
584.82 kB

HNRNPA2B1_293Flp_siCtrl_20151023_JU1_1

FASTQ file (CLIP)
hnrnpa2b1-293flp-sictrl-20151023-ju1-1.fastq.gz
69.04 MB
fastqc
Directory
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_fastqc.zip
462.01 kB
Cutadapt (single-end)
report.txt
673 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.fastq.gz
69.70 MB
fastqc
Directory
STAR
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
5.32 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.bam.bai
3.73 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.bam
188.73 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_stats.txt
1.80 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_SJ.out.tab
482.99 kB
Paraclu
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_peaks.bed.gz
7.88 kB
PEKA
4mer analysis of hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome.tar.gz
452.67 kB
iCount RNA-maps
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.tar.gz
1.10 MB
iCount summary
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_type.tsv
605 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1003 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_gene.tsv
2.35 MB
iCount xlsites
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_skipped.bam
3.41 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.bed.gz
6.15 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
8.95 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_reads_single.bed.gz
6.22 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.bedgraph
27.97 MB

HNRNPA2B1_293Flp_siCtrl_20151023_JU1

FASTQ file (CLIP)
hnrnpa2b1-293flp-sictrl-20151023-ju1.fastq.gz
562.97 MB
fastqc
Directory
hnrnpa2b1-293flp-sictrl-20151023-ju1_fastqc.zip
449.66 kB
iCount summary
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_type.tsv
623 B
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_gene.tsv
3.28 MB
Paraclu
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_peaks.bed.gz
311.55 kB
Cutadapt (single-end)
report.txt
672 B
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.fastq.gz
569.16 MB
fastqc
Directory
STAR
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_unmapped.out.mate1.fastq.gz
43.93 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.bam.bai
3.52 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.bam
1.27 GB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_stats.txt
1.81 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_SJ.out.tab
2.34 MB
iCount xlsites
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_skipped.bam
5.04 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.bed.gz
49.84 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_singleAndMulti.bed.gz
68.12 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_reads_single.bed.gz
50.33 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.bedgraph
236.96 MB
PEKA
4mer analysis of hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome.tar.gz
740.65 kB
iCount RNA-maps
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.tar.gz
2.95 MB

No Sample

FASTQ file (single-end)
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNATCGNN_20151023_JU1_6_renamed.fastq.gz
92.32 MB
fastqc
Directory
stderr.txt
2.03 kB
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNATCGNN_20151023_JU1_6_renamed_fastqc.zip
584.82 kB
FASTQ file (single-end)
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNAGGGNN_20151023_JU1_5_renamed.fastq.gz
752.99 MB
fastqc
Directory
stderr.txt
2.03 kB
iCLIP_HNRNPA2B1_293Flp_siCtrl_Hs_NNNAGGGNN_20151023_JU1_5_renamed_fastqc.zip
541.13 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
267 B
FASTQ file (CLIP)
hnrnpa2b1-293flp-sictrl-20151023-ju1-1.fastq.gz
69.04 MB
fastqc
Directory
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_fastqc.zip
462.01 kB
Cutadapt (single-end)
report.txt
673 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.fastq.gz
69.70 MB
fastqc
Directory
STAR
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
5.32 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.bam.bai
3.73 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed.bam
188.73 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_stats.txt
1.80 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_trimmed_SJ.out.tab
482.99 kB
FASTQ file (CLIP)
hnrnpa2b1-293flp-sictrl-20151023-ju1.fastq.gz
562.97 MB
fastqc
Directory
hnrnpa2b1-293flp-sictrl-20151023-ju1_fastqc.zip
449.66 kB
Paraclu
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_peaks.bed.gz
7.88 kB
iCount summary
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_type.tsv
623 B
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_summary_gene.tsv
3.28 MB
Paraclu
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single_peaks.bed.gz
311.55 kB
Cutadapt (single-end)
report.txt
672 B
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.fastq.gz
569.16 MB
fastqc
Directory
STAR
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_unmapped.out.mate1.fastq.gz
43.93 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.bam.bai
3.52 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed.bam
1.27 GB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_stats.txt
1.81 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_trimmed_SJ.out.tab
2.34 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
269 B
iCount xlsites
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_skipped.bam
5.04 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.bed.gz
49.84 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_singleAndMulti.bed.gz
68.12 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_reads_single.bed.gz
50.33 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.bedgraph
236.96 MB
PEKA
4mer analysis of hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome.tar.gz
740.65 kB
iCount RNA-maps
hnrnpa2b1-293flp-sictrl-20151023-ju1_mapped_to_genome_single.tar.gz
2.95 MB
PEKA
4mer analysis of hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome.tar.gz
452.67 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
269 B
iCount RNA-maps
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.tar.gz
1.10 MB
iCount summary
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_type.tsv
605 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1003 B
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single_summary_gene.tsv
2.35 MB
iCount xlsites
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_skipped.bam
3.41 kB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.bed.gz
6.15 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
8.95 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_reads_single.bed.gz
6.22 MB
hnrnpa2b1-293flp-sictrl-20151023-ju1-1_mapped_to_genome_single.bedgraph
27.97 MB
Upload iCount sample annotation
HNRNPA2B1_20151023_JU1_annotation_sheet_v2.xlsx
10.27 kB
HNRNPA2B1_20151023_JU1_annotation_sheet_v2.tab.gz
1.07 kB