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Folder iconDDX18 AATA

Miha Modic
Jan. 14, 2022

No Sample

STAR
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam.bai
1.95 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam
334.93 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_stats.txt
1.81 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_SJ.out.tab
292.01 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_unmapped.out.mate1.fastq.gz
223.14 MB
iCount xlsites
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_skipped.bam
75.91 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bed.gz
496.13 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_singleAndMulti.bed.gz
973.60 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_reads_single.bed.gz
543.53 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bedgraph
1.96 MB
iCount RNA-maps
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.tar.gz
993 B
Paraclu
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_peaks.bed.gz
145 B
iCount summary
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_type.tsv
294 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_subtype.tsv
177 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_gene.tsv
316 B
FASTQ file (single-end)
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19.fastq.gz
267.19 MB
fastqc
Directory
stderr.txt
1.79 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_fastqc.zip
474.17 kB
Upload iCount sample annotation
sample annotation aata.xlsx
9.41 kB
sample annotation aata.tab.gz
224 B
Paraclu
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_peaks.bed.gz
172 B
Cutadapt (single-end)
report.txt
696 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.fastq.gz
278.06 MB
fastqc
Directory
STAR
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_unmapped.out.mate1.fastq.gz
242.12 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam.bai
38.33 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam
293.65 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_stats.txt
1.80 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_SJ.out.tab
2.87 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bw
1.53 MB
iCount xlsites
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_skipped.bam
50.55 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bed.gz
3.11 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_singleAndMulti.bed.gz
16.08 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_reads_single.bed.gz
3.69 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bedgraph
178 B
iCount RNA-maps
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.tar.gz
993 B
Cutadapt (single-end)
report.txt
696 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.fastq.gz
278.06 MB
fastqc
Directory
Upload iCount sample annotation
name_annotation_sheet.xlsx
221.14 kB
name_annotation_sheet.tab.gz
471 B
Upload iCount sample annotation
sample annotation aata.xlsx
10.31 kB
sample annotation aata.tab.gz
480 B
Upload iCount sample annotation
sample annotation aata.xlsx
10.33 kB
sample annotation aata.tab.gz
481 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
189 B

DDX18-FLAG AATA

FASTQ file (single-end)
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19.fastq.gz
267.19 MB
fastqc
Directory
stderr.txt
1.79 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_fastqc.zip
474.17 kB
Paraclu
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_peaks.bed.gz
172 B
Cutadapt (single-end)
report.txt
696 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.fastq.gz
278.06 MB
fastqc
Directory
STAR
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_unmapped.out.mate1.fastq.gz
242.12 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam.bai
38.33 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam
293.65 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_stats.txt
1.80 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_SJ.out.tab
2.87 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bw
1.53 MB
iCount xlsites
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_skipped.bam
50.55 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bed.gz
3.11 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_singleAndMulti.bed.gz
16.08 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_reads_single.bed.gz
3.69 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bedgraph
178 B
iCount RNA-maps
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.tar.gz
993 B
Cutadapt (single-end)
report.txt
696 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.fastq.gz
278.06 MB
fastqc
Directory
STAR
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_unmapped.out.mate1.fastq.gz
223.14 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam.bai
1.95 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed.bam
334.93 MB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_stats.txt
1.81 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_trimmed_SJ.out.tab
292.01 kB
iCount xlsites
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_skipped.bam
75.91 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bed.gz
496.13 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_singleAndMulti.bed.gz
973.60 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_reads_single.bed.gz
543.53 kB
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.bedgraph
1.96 MB
iCount RNA-maps
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single.tar.gz
993 B
Paraclu
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_peaks.bed.gz
145 B
iCount summary
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_type.tsv
294 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_subtype.tsv
177 B
iCLIP_FLAG-DDX18_hESC_H9_1-400_Hs_NNNAATANN_20170607_Mm_19_mapped_to_genome_single_summary_gene.tsv
316 B