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Folder iconCas13_V5 iCLIP

Tajda Klobučar
Dec. 7, 2021
Anja's first attempt for clipping Cas13 using gRNA 1 and 2. And V5 antiobody to pulldown (NB600-381\tNovusBiological Antibody). Anja has more details written down. Pretty high cycles for final PCR (18 and 16 I think?)

FAR4523A18-A31_S2_L002_R1_001.fastq.gz

FASTQ file (single-end)
FAR4523A18-A31_S2_L002_R1_001.fastq.gz
21.48 GB
fastqc
Directory
stderr.txt
1.23 kB
FAR4523A18-A31_S2_L002_R1_001_fastqc.zip
538.53 kB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
12.92 GB
fastqc
Directory
demux_nomatch_fastqc.zip
551.54 kB

No Sample

FASTQ file (single-end)
FAR4523A18-A31_S2_L002_R1_001.fastq.gz
21.48 GB
fastqc
Directory
stderr.txt
1.23 kB
FAR4523A18-A31_S2_L002_R1_001_fastqc.zip
538.53 kB
Upload iCount sample annotation
name_annotation_sheet_Anja_Cas13.xlsx
223.14 kB
name_annotation_sheet_Anja_Cas13.tab.gz
614 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
250 B
FASTQ file (CLIP)
demux_nomatch.fastq.gz
12.92 GB
fastqc
Directory
demux_nomatch_fastqc.zip
551.54 kB