PEKA
5mer analysis of PR100_Flag_upper_PK_digest_grouped_cdna.tar.gz
1.27 MB
PEKA
5mer analysis of PR100_Flag_lower_PK_digest_grouped_cdna.tar.gz
1.35 MB
PEKA
5mer analysis of PR100_Flag_selected_PK_digest_grouped_cdna.tar.gz
1.42 MB
FASTQ file (CLIP)
20170510-ju-1.fastq.gz
108.06 MB
20170510-ju-1_fastqc.zip
840.00 kB
FASTQ file (CLIP)
20170510-ju-15.fastq.gz
24.07 MB
20170510-ju-15_fastqc.zip
772.14 kB
FASTQ file (CLIP)
20170510-ju-14.fastq.gz
89.42 MB
20170510-ju-14_fastqc.zip
796.52 kB
FASTQ file (CLIP)
20170510-ju-13.fastq.gz
302.44 MB
20170510-ju-13_fastqc.zip
741.46 kB
FASTQ file (CLIP)
20170510-ju-12.fastq.gz
165.46 MB
20170510-ju-12_fastqc.zip
789.23 kB
Cutadapt (single-end)
20170510-ju-15_trimmed.fastq.gz
17.30 MB
FASTQ file (CLIP)
20170510-ju-11.fastq.gz
22.34 MB
20170510-ju-11_fastqc.zip
760.96 kB
FASTQ file (CLIP)
20170510-ju-10.fastq.gz
71.13 MB
20170510-ju-10_fastqc.zip
905.74 kB
Cutadapt (single-end)
20170510-ju-14_trimmed.fastq.gz
78.57 MB
FASTQ file (CLIP)
20170510-ju-9.fastq.gz
23.65 MB
20170510-ju-9_fastqc.zip
852.69 kB
FASTQ file (CLIP)
20170510-ju-8.fastq.gz
11.10 MB
20170510-ju-8_fastqc.zip
809.37 kB
FASTQ file (CLIP)
20170510-ju-7.fastq.gz
7.47 MB
20170510-ju-7_fastqc.zip
869.73 kB
FASTQ file (CLIP)
20170510-ju-6.fastq.gz
207.60 MB
20170510-ju-6_fastqc.zip
962.12 kB
Cutadapt (single-end)
20170510-ju-13_trimmed.fastq.gz
160.22 MB
FASTQ file (CLIP)
20170510-ju-5.fastq.gz
520.22 MB
20170510-ju-5_fastqc.zip
951.13 kB
FASTQ file (CLIP)
20170510-ju-4.fastq.gz
106.54 MB
20170510-ju-4_fastqc.zip
786.05 kB
iCount group
PR100_Flag_selected_PK_digest_grouped_cdna.bed.gz
4.85 MB
PR100_Flag_selected_PK_digest_grouped_reads.bed.gz
5.66 MB
PR100_Flag_selected_PK_digest_grouped_cdna.bedgraph
20.07 MB
iCount annotate
PR100_Flag_selected_PK_digest_grouped_cdna_annotated.bed.gz
6.48 MB
PR100_Flag_selected_PK_digest_grouped_cdna_annotated.bedgraph
20.07 MB
FASTQ file (CLIP)
20170510-ju-2.fastq.gz
119.61 MB
20170510-ju-2_fastqc.zip
916.87 kB
iCount summary
PR100_Flag_selected_PK_digest_grouped_cdna_summary_type.tsv
447 B
PR100_Flag_selected_PK_digest_grouped_cdna_summary_subtype.tsv
1.01 kB
PR100_Flag_selected_PK_digest_grouped_cdna_summary_gene.tsv
2.94 MB
iCount RNA-maps
PR100_Flag_selected_PK_digest_grouped_cdna.tar.gz
1.37 MB
Paraclu
PR100_Flag_selected_PK_digest_grouped_cdna_peaks.bed.gz
51.08 kB
STAR
20170510-ju-15_trimmed_unmapped.out.mate1.fastq.gz
9.59 MB
20170510-ju-15_trimmed.bam.bai
1.57 MB
20170510-ju-15_trimmed.bam
38.39 MB
20170510-ju-15_trimmed_stats.txt
1.79 kB
20170510-ju-15_trimmed_SJ.out.tab
4.92 kB
20170510-ju-15_trimmed.bw
19.14 kB
Cutadapt (single-end)
20170510-ju-12_trimmed.fastq.gz
69.05 MB
Cutadapt (single-end)
20170510-ju-11_trimmed.fastq.gz
16.93 MB
Cutadapt (single-end)
20170510-ju-10_trimmed.fastq.gz
46.26 MB
Cutadapt (single-end)
20170510-ju-9_trimmed.fastq.gz
21.39 MB
Cutadapt (single-end)
20170510-ju-8_trimmed.fastq.gz
6.29 MB
Cutadapt (single-end)
20170510-ju-7_trimmed.fastq.gz
4.56 MB
Cutadapt (single-end)
20170510-ju-6_trimmed.fastq.gz
191.74 MB
STAR
20170510-ju-14_trimmed_unmapped.out.mate1.fastq.gz
36.48 MB
20170510-ju-14_trimmed.bam.bai
1.79 MB
20170510-ju-14_trimmed.bam
212.88 MB
20170510-ju-14_trimmed_stats.txt
1.80 kB
20170510-ju-14_trimmed_SJ.out.tab
11.48 kB
Cutadapt (single-end)
20170510-ju-5_trimmed.fastq.gz
422.14 MB
Cutadapt (single-end)
20170510-ju-4_trimmed.fastq.gz
56.51 MB
Cutadapt (single-end)
20170510-ju-3_trimmed.fastq.gz
22.26 MB
Cutadapt (single-end)
20170510-ju-2_trimmed.fastq.gz
71.88 MB
Cutadapt (single-end)
20170510-ju-1_trimmed.fastq.gz
59.78 MB
STAR
20170510-ju-13_trimmed_unmapped.out.mate1.fastq.gz
67.55 MB
20170510-ju-13_trimmed.bam.bai
2.55 MB
20170510-ju-13_trimmed.bam
399.67 MB
20170510-ju-13_trimmed_stats.txt
1.81 kB
20170510-ju-13_trimmed_SJ.out.tab
40.01 kB
iCount xlsites
20170510-ju-15_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-15_mapped_to_genome_single.bed.gz
10.68 kB
20170510-ju-15_mapped_to_genome_singleAndMulti.bed.gz
79.86 kB
20170510-ju-15_mapped_to_genome_reads_single.bed.gz
11.37 kB
20170510-ju-15_mapped_to_genome_single.bedgraph
33.96 kB
STAR
20170510-ju-12_trimmed_unmapped.out.mate1.fastq.gz
46.24 MB
20170510-ju-12_trimmed.bam.bai
1.96 MB
20170510-ju-12_trimmed.bam
120.20 MB
20170510-ju-12_trimmed_stats.txt
1.80 kB
20170510-ju-12_trimmed_SJ.out.tab
14.60 kB
20170510-ju-12_trimmed.bw
21.23 kB
STAR
20170510-ju-11_trimmed_unmapped.out.mate1.fastq.gz
11.38 MB
20170510-ju-11_trimmed.bam.bai
1.66 MB
20170510-ju-11_trimmed.bam
33.17 MB
20170510-ju-11_trimmed_stats.txt
1.79 kB
20170510-ju-11_trimmed_SJ.out.tab
5.62 kB
20170510-ju-11_trimmed.bw
19.27 kB
STAR
20170510-ju-9_trimmed_unmapped.out.mate1.fastq.gz
14.20 MB
20170510-ju-9_trimmed.bam.bai
1.62 MB
20170510-ju-9_trimmed.bam
44.38 MB
20170510-ju-9_trimmed_stats.txt
1.79 kB
20170510-ju-9_trimmed_SJ.out.tab
4.40 kB
20170510-ju-9_trimmed.bw
19.17 kB
STAR
20170510-ju-10_trimmed_unmapped.out.mate1.fastq.gz
34.37 MB
20170510-ju-10_trimmed.bam.bai
1.86 MB
20170510-ju-10_trimmed.bam
76.30 MB
20170510-ju-10_trimmed_stats.txt
1.80 kB
20170510-ju-10_trimmed_SJ.out.tab
10.27 kB
20170510-ju-10_trimmed.bw
20.31 kB
STAR
20170510-ju-8_trimmed_unmapped.out.mate1.fastq.gz
5.09 MB
20170510-ju-8_trimmed.bam.bai
1.50 MB
20170510-ju-8_trimmed.bam
9.95 MB
20170510-ju-8_trimmed_stats.txt
1.79 kB
20170510-ju-8_trimmed_SJ.out.tab
2.02 kB
20170510-ju-8_trimmed.bw
18.27 kB
STAR
20170510-ju-7_trimmed_unmapped.out.mate1.fastq.gz
3.37 MB
20170510-ju-7_trimmed.bam.bai
1.51 MB
20170510-ju-7_trimmed.bam
7.41 MB
20170510-ju-7_trimmed_stats.txt
1.79 kB
20170510-ju-7_trimmed_SJ.out.tab
1.60 kB
20170510-ju-7_trimmed.bw
17.71 kB
STAR
20170510-ju-6_trimmed_unmapped.out.mate1.fastq.gz
181.64 MB
20170510-ju-6_trimmed.bam.bai
1.75 MB
20170510-ju-6_trimmed.bam
235.64 MB
20170510-ju-6_trimmed_stats.txt
1.80 kB
20170510-ju-6_trimmed_SJ.out.tab
8.21 kB
20170510-ju-6_trimmed.bw
20.32 kB
iCount xlsites
20170510-ju-14_mapped_to_genome_skipped.bam
13.44 kB
20170510-ju-14_mapped_to_genome_single.bed.gz
32.80 kB
20170510-ju-14_mapped_to_genome_singleAndMulti.bed.gz
219.31 kB
20170510-ju-14_mapped_to_genome_reads_single.bed.gz
34.88 kB
20170510-ju-14_mapped_to_genome_single.bedgraph
112.11 kB
iCount peaks
PR100_Flag_selected_PK_digest_grouped_cdna_peaks.bed.gz
1.10 MB
PR100_Flag_selected_PK_digest_grouped_cdna_scores.tsv.gz
4.33 MB
PR100_Flag_selected_PK_digest_grouped_cdna_peaks.bedgraph
3.34 MB
iCount peaks
PR100_Flag_NXL_PK_digest_grouped_cdna_peaks.bed.gz
27.81 kB
PR100_Flag_NXL_PK_digest_grouped_cdna_scores.tsv.gz
457.41 kB
PR100_Flag_NXL_PK_digest_grouped_cdna_peaks.bedgraph
54.14 kB
iCount peaks
GA100_Flag_NXL_PK_digest_grouped_cdna_peaks.bed.gz
18.26 kB
GA100_Flag_NXL_PK_digest_grouped_cdna_scores.tsv.gz
195.70 kB
GA100_Flag_NXL_PK_digest_grouped_cdna_peaks.bedgraph
33.79 kB
iCount peaks
Flag_XL_PK_digest_grouped_cdna_peaks.bed.gz
39.98 kB
Flag_XL_PK_digest_grouped_cdna_scores.tsv.gz
252.97 kB
Flag_XL_PK_digest_grouped_cdna_peaks.bedgraph
67.83 kB
iCount peaks
GA100_Flag_XL_PK_digest_grouped_cdna_peaks.bed.gz
35.29 kB
GA100_Flag_XL_PK_digest_grouped_cdna_scores.tsv.gz
524.18 kB
GA100_Flag_XL_PK_digest_grouped_cdna_peaks.bedgraph
68.81 kB
STAR
20170510-ju-5_trimmed_unmapped.out.mate1.fastq.gz
413.41 MB
20170510-ju-5_trimmed.bam.bai
1.86 MB
20170510-ju-5_trimmed.bam
513.04 MB
20170510-ju-5_trimmed_stats.txt
1.80 kB
20170510-ju-5_trimmed_SJ.out.tab
12.90 kB
20170510-ju-5_trimmed.bw
21.44 kB
STAR
20170510-ju-4_trimmed_unmapped.out.mate1.fastq.gz
32.97 MB
20170510-ju-4_trimmed.bam.bai
2.05 MB
20170510-ju-4_trimmed.bam
114.98 MB
20170510-ju-4_trimmed_stats.txt
1.80 kB
20170510-ju-4_trimmed_SJ.out.tab
20.17 kB
STAR
20170510-ju-3_trimmed_unmapped.out.mate1.fastq.gz
12.42 MB
20170510-ju-3_trimmed.bam.bai
1.79 MB
20170510-ju-3_trimmed.bam
47.14 MB
20170510-ju-3_trimmed_stats.txt
1.80 kB
20170510-ju-3_trimmed_SJ.out.tab
9.96 kB
20170510-ju-3_trimmed.bw
20.43 kB
STAR
20170510-ju-2_trimmed_unmapped.out.mate1.fastq.gz
51.88 MB
20170510-ju-2_trimmed.bam.bai
2.09 MB
20170510-ju-2_trimmed.bam
109.57 MB
20170510-ju-2_trimmed_stats.txt
1.80 kB
20170510-ju-2_trimmed_SJ.out.tab
14.36 kB
20170510-ju-2_trimmed.bw
21.88 kB
STAR
20170510-ju-1_trimmed_unmapped.out.mate1.fastq.gz
28.40 MB
20170510-ju-1_trimmed.bam.bai
2.77 MB
20170510-ju-1_trimmed.bam
94.41 MB
20170510-ju-1_trimmed_stats.txt
1.80 kB
20170510-ju-1_trimmed_SJ.out.tab
46.54 kB
20170510-ju-1_trimmed.bw
23.76 kB
iCount summary
20170510-ju-15_mapped_to_genome_single_summary_type.tsv
577 B
20170510-ju-15_mapped_to_genome_single_summary_subtype.tsv
833 B
20170510-ju-15_mapped_to_genome_single_summary_gene.tsv
67.80 kB
FASTQ file (single-end)
PR100_iCLIP_20171130_RB_all_samples.fastq.gz
10.36 GB
PR100_iCLIP_20171130_RB_all_samples_fastqc.zip
497.24 kB
Paraclu
20170510-ju-15_mapped_to_genome_single_peaks.bed.gz
226 B
iCount RNA-maps
20170510-ju-15_mapped_to_genome_single.tar.gz
274.18 kB
iCount xlsites
20170510-ju-11_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-11_mapped_to_genome_single.bed.gz
17.71 kB
20170510-ju-11_mapped_to_genome_singleAndMulti.bed.gz
123.88 kB
20170510-ju-11_mapped_to_genome_reads_single.bed.gz
18.41 kB
20170510-ju-11_mapped_to_genome_single.bedgraph
58.99 kB
iCount xlsites
20170510-ju-12_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-12_mapped_to_genome_single.bed.gz
47.10 kB
20170510-ju-12_mapped_to_genome_singleAndMulti.bed.gz
305.40 kB
20170510-ju-12_mapped_to_genome_reads_single.bed.gz
48.79 kB
20170510-ju-12_mapped_to_genome_single.bedgraph
162.92 kB
iCount xlsites
20170510-ju-9_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-9_mapped_to_genome_single.bed.gz
13.32 kB
20170510-ju-9_mapped_to_genome_singleAndMulti.bed.gz
105.90 kB
20170510-ju-9_mapped_to_genome_reads_single.bed.gz
13.69 kB
20170510-ju-9_mapped_to_genome_single.bedgraph
43.35 kB
iCount xlsites
20170510-ju-8_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-8_mapped_to_genome_single.bed.gz
7.11 kB
20170510-ju-8_mapped_to_genome_singleAndMulti.bed.gz
48.07 kB
20170510-ju-8_mapped_to_genome_reads_single.bed.gz
7.42 kB
20170510-ju-8_mapped_to_genome_single.bedgraph
23.29 kB
iCount xlsites
20170510-ju-7_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-7_mapped_to_genome_single.bed.gz
6.72 kB
20170510-ju-7_mapped_to_genome_singleAndMulti.bed.gz
38.64 kB
20170510-ju-7_mapped_to_genome_reads_single.bed.gz
7.24 kB
20170510-ju-7_mapped_to_genome_single.bedgraph
20.92 kB
iCount xlsites
20170510-ju-10_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-10_mapped_to_genome_single.bed.gz
32.50 kB
20170510-ju-10_mapped_to_genome_singleAndMulti.bed.gz
231.14 kB
20170510-ju-10_mapped_to_genome_reads_single.bed.gz
33.55 kB
20170510-ju-10_mapped_to_genome_single.bedgraph
110.95 kB
iCount summary
20170510-ju-14_mapped_to_genome_single_summary_type.tsv
591 B
20170510-ju-14_mapped_to_genome_single_summary_subtype.tsv
854 B
20170510-ju-14_mapped_to_genome_single_summary_gene.tsv
174.46 kB
iCount xlsites
20170510-ju-6_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-6_mapped_to_genome_single.bed.gz
24.08 kB
20170510-ju-6_mapped_to_genome_singleAndMulti.bed.gz
170.04 kB
20170510-ju-6_mapped_to_genome_reads_single.bed.gz
25.07 kB
20170510-ju-6_mapped_to_genome_single.bedgraph
80.43 kB
Paraclu
20170510-ju-14_mapped_to_genome_single_peaks.bed.gz
919 B
PEKA
4mer analysis of 20170510-ju-14_mapped_to_genome.tar.gz
68.38 kB
iCount RNA-maps
20170510-ju-14_mapped_to_genome_single.tar.gz
298.23 kB
iCount xlsites
20170510-ju-5_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-5_mapped_to_genome_single.bed.gz
31.12 kB
20170510-ju-5_mapped_to_genome_singleAndMulti.bed.gz
246.28 kB
20170510-ju-5_mapped_to_genome_reads_single.bed.gz
31.94 kB
20170510-ju-5_mapped_to_genome_single.bedgraph
103.21 kB
iCount xlsites
20170510-ju-3_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-3_mapped_to_genome_single.bed.gz
23.85 kB
20170510-ju-3_mapped_to_genome_singleAndMulti.bed.gz
185.35 kB
20170510-ju-3_mapped_to_genome_reads_single.bed.gz
24.88 kB
20170510-ju-3_mapped_to_genome_single.bedgraph
77.83 kB
iCount xlsites
20170510-ju-4_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-4_mapped_to_genome_single.bed.gz
50.75 kB
20170510-ju-4_mapped_to_genome_singleAndMulti.bed.gz
367.13 kB
20170510-ju-4_mapped_to_genome_reads_single.bed.gz
53.57 kB
20170510-ju-4_mapped_to_genome_single.bedgraph
170.57 kB
iCount xlsites
20170510-ju-13_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-13_mapped_to_genome_single.bed.gz
105.93 kB
20170510-ju-13_mapped_to_genome_singleAndMulti.bed.gz
711.98 kB
20170510-ju-13_mapped_to_genome_reads_single.bed.gz
111.43 kB
20170510-ju-13_mapped_to_genome_single.bedgraph
371.61 kB
iCount xlsites
20170510-ju-2_mapped_to_genome_skipped.bam
3.05 kB
20170510-ju-2_mapped_to_genome_single.bed.gz
51.92 kB
20170510-ju-2_mapped_to_genome_singleAndMulti.bed.gz
346.22 kB
20170510-ju-2_mapped_to_genome_reads_single.bed.gz
54.48 kB
20170510-ju-2_mapped_to_genome_single.bedgraph
176.15 kB
PEKA
4mer analysis of 20170510-ju-15_mapped_to_genome.tar.gz
150 B
iCount RNA-maps
20170510-ju-11_mapped_to_genome_single.tar.gz
282.85 kB
iCount summary
20170510-ju-11_mapped_to_genome_single_summary_type.tsv
582 B
20170510-ju-11_mapped_to_genome_single_summary_subtype.tsv
835 B
20170510-ju-11_mapped_to_genome_single_summary_gene.tsv
94.62 kB
Paraclu
20170510-ju-11_mapped_to_genome_single_peaks.bed.gz
422 B
iCount summary
20170510-ju-12_mapped_to_genome_single_summary_type.tsv
594 B
20170510-ju-12_mapped_to_genome_single_summary_subtype.tsv
920 B
20170510-ju-12_mapped_to_genome_single_summary_gene.tsv
219.56 kB
iCount xlsites
20170510-ju-1_mapped_to_genome_skipped.bam
4.26 kB
20170510-ju-1_mapped_to_genome_single.bed.gz
150.26 kB
20170510-ju-1_mapped_to_genome_singleAndMulti.bed.gz
811.51 kB
20170510-ju-1_mapped_to_genome_reads_single.bed.gz
167.73 kB
20170510-ju-1_mapped_to_genome_single.bedgraph
533.61 kB
Paraclu
20170510-ju-12_mapped_to_genome_single_peaks.bed.gz
1.95 kB
PEKA
4mer analysis of 20170510-ju-12_mapped_to_genome.tar.gz
140.35 kB
iCount summary
20170510-ju-9_mapped_to_genome_single_summary_type.tsv
582 B
20170510-ju-9_mapped_to_genome_single_summary_subtype.tsv
773 B
20170510-ju-9_mapped_to_genome_single_summary_gene.tsv
62.24 kB
Paraclu
20170510-ju-9_mapped_to_genome_single_peaks.bed.gz
365 B
iCount summary
20170510-ju-8_mapped_to_genome_single_summary_type.tsv
569 B
20170510-ju-8_mapped_to_genome_single_summary_subtype.tsv
828 B
20170510-ju-8_mapped_to_genome_single_summary_gene.tsv
42.28 kB
iCount RNA-maps
20170510-ju-12_mapped_to_genome_single.tar.gz
300.90 kB
Paraclu
20170510-ju-8_mapped_to_genome_single_peaks.bed.gz
150 B
PEKA
4mer analysis of 20170510-ju-8_mapped_to_genome.tar.gz
151 B
iCount summary
20170510-ju-7_mapped_to_genome_single_summary_type.tsv
567 B
20170510-ju-7_mapped_to_genome_single_summary_subtype.tsv
634 B
20170510-ju-7_mapped_to_genome_single_summary_gene.tsv
48.39 kB
iCount RNA-maps
20170510-ju-9_mapped_to_genome_single.tar.gz
258.70 kB
Paraclu
20170510-ju-7_mapped_to_genome_single_peaks.bed.gz
133 B
iCount summary
20170510-ju-10_mapped_to_genome_single_summary_type.tsv
588 B
20170510-ju-10_mapped_to_genome_single_summary_subtype.tsv
848 B
20170510-ju-10_mapped_to_genome_single_summary_gene.tsv
150.04 kB
PEKA
4mer analysis of 20170510-ju-7_mapped_to_genome.tar.gz
149 B
iCount RNA-maps
20170510-ju-8_mapped_to_genome_single.tar.gz
238.65 kB
Paraclu
20170510-ju-10_mapped_to_genome_single_peaks.bed.gz
871 B
iCount summary
20170510-ju-6_mapped_to_genome_single_summary_type.tsv
589 B
20170510-ju-6_mapped_to_genome_single_summary_subtype.tsv
840 B
20170510-ju-6_mapped_to_genome_single_summary_gene.tsv
114.90 kB
iCount RNA-maps
20170510-ju-7_mapped_to_genome_single.tar.gz
213.51 kB
Paraclu
20170510-ju-6_mapped_to_genome_single_peaks.bed.gz
547 B
iCount RNA-maps
20170510-ju-10_mapped_to_genome_single.tar.gz
295.15 kB
iCount summary
20170510-ju-5_mapped_to_genome_single_summary_type.tsv
584 B
20170510-ju-5_mapped_to_genome_single_summary_subtype.tsv
847 B
20170510-ju-5_mapped_to_genome_single_summary_gene.tsv
149.09 kB
iCount RNA-maps
20170510-ju-6_mapped_to_genome_single.tar.gz
299.19 kB
Paraclu
20170510-ju-5_mapped_to_genome_single_peaks.bed.gz
867 B
iCount summary
20170510-ju-3_mapped_to_genome_single_summary_type.tsv
583 B
20170510-ju-3_mapped_to_genome_single_summary_subtype.tsv
779 B
20170510-ju-3_mapped_to_genome_single_summary_gene.tsv
133.05 kB
iCount RNA-maps
20170510-ju-3_mapped_to_genome_single.tar.gz
294.74 kB
iCount RNA-maps
20170510-ju-5_mapped_to_genome_single.tar.gz
300.10 kB
Paraclu
20170510-ju-3_mapped_to_genome_single_peaks.bed.gz
260 B
iCount summary
20170510-ju-4_mapped_to_genome_single_summary_type.tsv
591 B
20170510-ju-4_mapped_to_genome_single_summary_subtype.tsv
910 B
20170510-ju-4_mapped_to_genome_single_summary_gene.tsv
276.24 kB
Paraclu
20170510-ju-4_mapped_to_genome_single_peaks.bed.gz
706 B
iCount summary
20170510-ju-2_mapped_to_genome_single_summary_type.tsv
591 B
20170510-ju-2_mapped_to_genome_single_summary_subtype.tsv
914 B
20170510-ju-2_mapped_to_genome_single_summary_gene.tsv
256.50 kB
iCount RNA-maps
20170510-ju-4_mapped_to_genome_single.tar.gz
357.97 kB
Paraclu
20170510-ju-2_mapped_to_genome_single_peaks.bed.gz
1.12 kB
iCount summary
20170510-ju-13_mapped_to_genome_single_summary_type.tsv
599 B
20170510-ju-13_mapped_to_genome_single_summary_subtype.tsv
932 B
20170510-ju-13_mapped_to_genome_single_summary_gene.tsv
475.63 kB
iCount RNA-maps
20170510-ju-2_mapped_to_genome_single.tar.gz
327.07 kB
Paraclu
20170510-ju-13_mapped_to_genome_single_peaks.bed.gz
4.50 kB
PEKA
4mer analysis of 20170510-ju-11_mapped_to_genome.tar.gz
149 B
iCount summary
20170510-ju-1_mapped_to_genome_single_summary_type.tsv
602 B
20170510-ju-1_mapped_to_genome_single_summary_subtype.tsv
995 B
20170510-ju-1_mapped_to_genome_single_summary_gene.tsv
828.79 kB
iCount RNA-maps
20170510-ju-13_mapped_to_genome_single.tar.gz
372.84 kB
Paraclu
20170510-ju-1_mapped_to_genome_single_peaks.bed.gz
1.22 kB
PEKA
4mer analysis of 20170510-ju-9_mapped_to_genome.tar.gz
151 B
iCount RNA-maps
20170510-ju-1_mapped_to_genome_single.tar.gz
450.22 kB
PEKA
4mer analysis of 20170510-ju-10_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170510-ju-4_mapped_to_genome.tar.gz
67.54 kB
PEKA
4mer analysis of 20170510-ju-6_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170510-ju-2_mapped_to_genome.tar.gz
137.74 kB
PEKA
4mer analysis of 20170510-ju-3_mapped_to_genome.tar.gz
149 B
PEKA
4mer analysis of 20170510-ju-13_mapped_to_genome.tar.gz
183.80 kB
PEKA
4mer analysis of 20170510-ju-1_mapped_to_genome.tar.gz
345.32 kB
PEKA
4mer analysis of 20170510-ju-5_mapped_to_genome.tar.gz
150 B
FASTQ file (CLIP)
demux_nomatch.fastq.gz
7.94 GB
demux_nomatch_fastqc.zip
494.33 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
421 B
FASTQ file (CLIP)
20171130-rb-7.fastq.gz
7.93 MB
20171130-rb-7_fastqc.zip
489.24 kB
FASTQ file (CLIP)
20171130-rb-6.fastq.gz
18.31 MB
20171130-rb-6_fastqc.zip
527.74 kB
Cutadapt (single-end)
20171130-rb-7_trimmed.fastq.gz
7.68 MB
iCount RNA-maps
20171130-rb-6_mapped_to_genome_single.tar.gz
401.34 kB
FASTQ file (CLIP)
20171130-rb-5.fastq.gz
40.81 MB
20171130-rb-5_fastqc.zip
496.42 kB
FASTQ file (CLIP)
20171130-rb-4.fastq.gz
23.36 MB
20171130-rb-4_fastqc.zip
443.17 kB
FASTQ file (CLIP)
20171130-rb-3.fastq.gz
26.56 MB
20171130-rb-3_fastqc.zip
491.14 kB
FASTQ file (CLIP)
20171130-rb-2.fastq.gz
57.46 MB
20171130-rb-2_fastqc.zip
435.98 kB
FASTQ file (CLIP)
20171130-rb-1.fastq.gz
98.65 MB
20171130-rb-1_fastqc.zip
489.32 kB
iCount RNA-maps
20171130-rb-1_mapped_to_genome_single.tar.gz
1.05 MB
PEKA
4mer analysis of 20171130-rb-1_mapped_to_genome.tar.gz
525.65 kB
Cutadapt (single-end)
20171130-rb-6_trimmed.fastq.gz
17.55 MB
STAR
20171130-rb-7_trimmed_unmapped.out.mate1.fastq.gz
1.77 MB
20171130-rb-7_trimmed.bam.bai
2.23 MB
20171130-rb-7_trimmed.bam
35.07 MB
20171130-rb-7_trimmed_stats.txt
1.80 kB
20171130-rb-7_trimmed_SJ.out.tab
45.86 kB
20171130-rb-7_trimmed.bw
23.84 kB
Cutadapt (single-end)
20171130-rb-5_trimmed.fastq.gz
41.03 MB
Cutadapt (single-end)
20171130-rb-4_trimmed.fastq.gz
23.77 MB
Cutadapt (single-end)
20171130-rb-3_trimmed.fastq.gz
26.27 MB
Cutadapt (single-end)
20171130-rb-2_trimmed.fastq.gz
58.76 MB
Cutadapt (single-end)
20171130-rb-1_trimmed.fastq.gz
98.07 MB
STAR
20171130-rb-6_trimmed_unmapped.out.mate1.fastq.gz
5.86 MB
20171130-rb-6_trimmed.bam.bai
2.37 MB
20171130-rb-6_trimmed.bam
62.31 MB
20171130-rb-6_trimmed_stats.txt
1.80 kB
20171130-rb-6_trimmed_SJ.out.tab
50.71 kB
20171130-rb-6_trimmed.bw
24.01 kB
iCount xlsites
20171130-rb-7_mapped_to_genome_skipped.bam
4.31 kB
20171130-rb-7_mapped_to_genome_single.bed.gz
107.63 kB
20171130-rb-7_mapped_to_genome_singleAndMulti.bed.gz
654.89 kB
20171130-rb-7_mapped_to_genome_reads_single.bed.gz
117.04 kB
20171130-rb-7_mapped_to_genome_single.bedgraph
392.19 kB
STAR
20171130-rb-4_trimmed_unmapped.out.mate1.fastq.gz
4.38 MB
20171130-rb-4_trimmed.bam.bai
2.60 MB
20171130-rb-4_trimmed.bam
101.32 MB
20171130-rb-4_trimmed_stats.txt
1.80 kB
20171130-rb-4_trimmed_SJ.out.tab
260.10 kB
STAR
20171130-rb-5_trimmed_unmapped.out.mate1.fastq.gz
11.37 MB
20171130-rb-5_trimmed.bam.bai
3.28 MB
20171130-rb-5_trimmed.bam
148.39 MB
20171130-rb-5_trimmed_stats.txt
1.80 kB
20171130-rb-5_trimmed_SJ.out.tab
132.36 kB
STAR
20171130-rb-3_trimmed_unmapped.out.mate1.fastq.gz
5.81 MB
20171130-rb-3_trimmed.bam.bai
3.01 MB
20171130-rb-3_trimmed.bam
127.52 MB
20171130-rb-3_trimmed_stats.txt
1.80 kB
20171130-rb-3_trimmed_SJ.out.tab
216.89 kB
STAR
20171130-rb-2_trimmed_unmapped.out.mate1.fastq.gz
10.91 MB
20171130-rb-2_trimmed.bam.bai
3.59 MB
20171130-rb-2_trimmed.bam
273.09 MB
20171130-rb-2_trimmed_stats.txt
1.80 kB
20171130-rb-2_trimmed_SJ.out.tab
565.88 kB
iCount xlsites
20171130-rb-6_mapped_to_genome_skipped.bam
3.05 kB
20171130-rb-6_mapped_to_genome_single.bed.gz
143.42 kB
20171130-rb-6_mapped_to_genome_singleAndMulti.bed.gz
764.60 kB
20171130-rb-6_mapped_to_genome_reads_single.bed.gz
155.62 kB
20171130-rb-6_mapped_to_genome_single.bedgraph
521.04 kB
STAR
20171130-rb-1_trimmed_unmapped.out.mate1.fastq.gz
31.16 MB
20171130-rb-1_trimmed.bam.bai
3.99 MB
20171130-rb-1_trimmed.bam
283.67 MB
20171130-rb-1_trimmed_stats.txt
1.81 kB
20171130-rb-1_trimmed_SJ.out.tab
960.39 kB
iCount summary
20171130-rb-7_mapped_to_genome_single_summary_type.tsv
586 B
20171130-rb-7_mapped_to_genome_single_summary_subtype.tsv
967 B
20171130-rb-7_mapped_to_genome_single_summary_gene.tsv
750.80 kB
Paraclu
20171130-rb-7_mapped_to_genome_single_peaks.bed.gz
483 B
iCount RNA-maps
20171130-rb-7_mapped_to_genome_single.tar.gz
407.65 kB
iCount xlsites
20171130-rb-4_mapped_to_genome_skipped.bam
3.26 kB
20171130-rb-4_mapped_to_genome_single.bed.gz
369.33 kB
20171130-rb-4_mapped_to_genome_singleAndMulti.bed.gz
1.20 MB
20171130-rb-4_mapped_to_genome_reads_single.bed.gz
414.95 kB
20171130-rb-4_mapped_to_genome_single.bedgraph
1.45 MB
iCount xlsites
20171130-rb-5_mapped_to_genome_skipped.bam
3.20 kB
20171130-rb-5_mapped_to_genome_single.bed.gz
457.71 kB
20171130-rb-5_mapped_to_genome_singleAndMulti.bed.gz
1.62 MB
20171130-rb-5_mapped_to_genome_reads_single.bed.gz
508.53 kB
20171130-rb-5_mapped_to_genome_single.bedgraph
1.75 MB
iCount xlsites
20171130-rb-3_mapped_to_genome_skipped.bam
3.05 kB
20171130-rb-3_mapped_to_genome_single.bed.gz
384.68 kB
20171130-rb-3_mapped_to_genome_singleAndMulti.bed.gz
1.52 MB
20171130-rb-3_mapped_to_genome_reads_single.bed.gz
426.35 kB
20171130-rb-3_mapped_to_genome_single.bedgraph
1.49 MB
iCount summary
20171130-rb-6_mapped_to_genome_single_summary_type.tsv
596 B
20171130-rb-6_mapped_to_genome_single_summary_subtype.tsv
979 B
20171130-rb-6_mapped_to_genome_single_summary_gene.tsv
832.16 kB
Paraclu
20171130-rb-6_mapped_to_genome_single_peaks.bed.gz
2.37 kB
PEKA
4mer analysis of 20171130-rb-7_mapped_to_genome.tar.gz
150 B
iCount summary
20171130-rb-4_mapped_to_genome_single_summary_type.tsv
604 B
20171130-rb-4_mapped_to_genome_single_summary_subtype.tsv
991 B
20171130-rb-4_mapped_to_genome_single_summary_gene.tsv
1.35 MB
iCount RNA-maps
20171130-rb-4_mapped_to_genome_single.tar.gz
559.28 kB
Paraclu
20171130-rb-4_mapped_to_genome_single_peaks.bed.gz
1.43 kB
iCount xlsites
20171130-rb-2_mapped_to_genome_skipped.bam
3.23 kB
20171130-rb-2_mapped_to_genome_single.bed.gz
969.81 kB
20171130-rb-2_mapped_to_genome_singleAndMulti.bed.gz
2.66 MB
20171130-rb-2_mapped_to_genome_reads_single.bed.gz
1.05 MB
20171130-rb-2_mapped_to_genome_single.bedgraph
3.98 MB
iCount summary
20171130-rb-5_mapped_to_genome_single_summary_type.tsv
605 B
20171130-rb-5_mapped_to_genome_single_summary_subtype.tsv
998 B
20171130-rb-5_mapped_to_genome_single_summary_gene.tsv
1.43 MB
Paraclu
20171130-rb-5_mapped_to_genome_single_peaks.bed.gz
3.58 kB
iCount summary
20171130-rb-3_mapped_to_genome_single_summary_type.tsv
602 B
20171130-rb-3_mapped_to_genome_single_summary_subtype.tsv
985 B
20171130-rb-3_mapped_to_genome_single_summary_gene.tsv
1.41 MB
iCount RNA-maps
20171130-rb-5_mapped_to_genome_single.tar.gz
484.56 kB
Paraclu
20171130-rb-3_mapped_to_genome_single_peaks.bed.gz
1.88 kB
iCount RNA-maps
20171130-rb-3_mapped_to_genome_single.tar.gz
542.32 kB
iCount xlsites
20171130-rb-1_mapped_to_genome_skipped.bam
3.38 kB
20171130-rb-1_mapped_to_genome_single.bed.gz
3.20 MB
20171130-rb-1_mapped_to_genome_singleAndMulti.bed.gz
12.70 MB
20171130-rb-1_mapped_to_genome_reads_single.bed.gz
3.51 MB
20171130-rb-1_mapped_to_genome_single.bedgraph
14.06 MB
Paraclu
20171130-rb-1_mapped_to_genome_single_peaks.bed.gz
35.01 kB
iCount summary
20171130-rb-2_mapped_to_genome_single_summary_type.tsv
610 B
20171130-rb-2_mapped_to_genome_single_summary_subtype.tsv
997 B
20171130-rb-2_mapped_to_genome_single_summary_gene.tsv
1.83 MB
iCount RNA-maps
20171130-rb-2_mapped_to_genome_single.tar.gz
777.19 kB
Paraclu
20171130-rb-2_mapped_to_genome_single_peaks.bed.gz
4.49 kB
PEKA
4mer analysis of 20171130-rb-6_mapped_to_genome.tar.gz
150.06 kB
PEKA
4mer analysis of 20171130-rb-5_mapped_to_genome.tar.gz
251.90 kB
iCount summary
20171130-rb-1_mapped_to_genome_single_summary_type.tsv
616 B
20171130-rb-1_mapped_to_genome_single_summary_subtype.tsv
1017 B
20171130-rb-1_mapped_to_genome_single_summary_gene.tsv
2.57 MB
PEKA
4mer analysis of 20171130-rb-4_mapped_to_genome.tar.gz
294.00 kB
PEKA
4mer analysis of 20171130-rb-3_mapped_to_genome.tar.gz
301.03 kB
PEKA
4mer analysis of 20171130-rb-2_mapped_to_genome.tar.gz
381.29 kB
iCount group
PR100_Flag_lower_PK_digest_grouped_cdna.bed.gz
3.68 MB
PR100_Flag_lower_PK_digest_grouped_reads.bed.gz
4.25 MB
PR100_Flag_lower_PK_digest_grouped_cdna.bedgraph
15.26 MB
iCount summary
PR100_Flag_lower_PK_digest_grouped_cdna_summary_type.tsv
445 B
PR100_Flag_lower_PK_digest_grouped_cdna_summary_subtype.tsv
1.01 kB
PR100_Flag_lower_PK_digest_grouped_cdna_summary_gene.tsv
2.76 MB
Paraclu
PR100_Flag_lower_PK_digest_grouped_cdna_peaks.bed.gz
44.58 kB
iCount RNA-maps
PR100_Flag_lower_PK_digest_grouped_cdna.tar.gz
1.27 MB
iCount annotate
PR100_Flag_lower_PK_digest_grouped_cdna_annotated.bed.gz
4.99 MB
PR100_Flag_lower_PK_digest_grouped_cdna_annotated.bedgraph
15.26 MB
iCount group
PR100_Flag_upper_PK_digest_grouped_cdna.bed.gz
3.15 MB
iCount group
PR100_Flag_upper_PK_digest_grouped_cdna.bed.gz
2.93 MB
PR100_Flag_upper_PK_digest_grouped_reads.bed.gz
3.39 MB
PR100_Flag_upper_PK_digest_grouped_cdna.bedgraph
12.15 MB
iCount RNA-maps
PR100_Flag_upper_PK_digest_grouped_cdna.tar.gz
1.09 MB
iCount summary
PR100_Flag_upper_PK_digest_grouped_cdna_summary_type.tsv
445 B
PR100_Flag_upper_PK_digest_grouped_cdna_summary_subtype.tsv
1.00 kB
PR100_Flag_upper_PK_digest_grouped_cdna_summary_gene.tsv
2.54 MB
iCount annotate
PR100_Flag_upper_PK_digest_grouped_cdna_annotated.bed.gz
4.02 MB
PR100_Flag_upper_PK_digest_grouped_cdna_annotated.bedgraph
12.15 MB
Paraclu
PR100_Flag_upper_PK_digest_grouped_cdna_peaks.bed.gz
35.35 kB
PEKA
4mer analysis of PR100_Flag_upper_PK_digest_grouped_cdna.tar.gz
567.13 kB
PEKA
4mer analysis of PR100_Flag_lower_PK_digest_grouped_cdna.tar.gz
601.63 kB
iCount group
PR100_selected_NOmaskedgenome_grouped_cdna.bed.gz
4.85 MB
PR100_selected_NOmaskedgenome_grouped_reads.bed.gz
5.66 MB
PR100_selected_NOmaskedgenome_grouped_cdna.bedgraph
20.07 MB
iCount RNA-maps
PR100_selected_NOmaskedgenome_grouped_cdna.tar.gz
1.37 MB
Paraclu
PR100_selected_NOmaskedgenome_grouped_cdna_peaks.bed.gz
51.08 kB
iCount summary
PR100_selected_NOmaskedgenome_grouped_cdna_summary_type.tsv
447 B
PR100_selected_NOmaskedgenome_grouped_cdna_summary_subtype.tsv
1.01 kB
PR100_selected_NOmaskedgenome_grouped_cdna_summary_gene.tsv
2.94 MB
iCount annotate
PR100_selected_NOmaskedgenome_grouped_cdna_annotated.bed.gz
6.48 MB
PR100_selected_NOmaskedgenome_grouped_cdna_annotated.bedgraph
20.07 MB
PEKA
5mer analysis of PR100_selected_NOmaskedgenome_grouped_cdna.tar.gz
1023.70 kB
PEKA
5mer analysis of PR100_Flag_upper_PK_digest_grouped_cdna.tar.gz
2.46 MB
PEKA
5mer analysis of PR100_Flag_lower_PK_digest_grouped_cdna.tar.gz
2.62 MB
Upload iCount sample annotation
sample_sheet_20170814_JU_all_samples.xlsx
10.12 kB
sample_sheet_20170814_JU_all_samples.tab.gz
722 B
Upload iCount sample annotation
sample_sheet_20170509_JU_all_samples.xlsx
11.75 kB
sample_sheet_20170509_JU_all_samples.tab.gz
990 B
FASTQ file (single-end)
PR100_iCLIP_20170814_JU.fastq.gz
3.37 GB
PR100_iCLIP_20170814_JU_fastqc.zip
557.05 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
500 B
FASTQ file (single-end)
LEE858A1_S35_L006_R1_001.fastq.gz
5.26 GB
LEE858A1_S35_L006_R1_001_fastqc.zip
480.48 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
1.28 kB
FASTQ file (CLIP)
20170814-ju-20.fastq.gz
138.77 MB
20170814-ju-20_fastqc.zip
1.01 MB
FASTQ file (CLIP)
20170814-ju-23.fastq.gz
230.37 kB
20170814-ju-23_fastqc.zip
602.87 kB
FASTQ file (CLIP)
20170814-ju-22.fastq.gz
2.97 MB
20170814-ju-22_fastqc.zip
573.98 kB
FASTQ file (CLIP)
20170814-ju-21.fastq.gz
7.95 MB
20170814-ju-21_fastqc.zip
1.00 MB
FASTQ file (CLIP)
20170814-ju-19.fastq.gz
13.93 MB
20170814-ju-19_fastqc.zip
744.52 kB
FASTQ file (CLIP)
20170814-ju-18.fastq.gz
2.57 MB
20170814-ju-18_fastqc.zip
753.86 kB
PEKA
4mer analysis of 20170814-ju-18_mapped_to_genome.tar.gz
150 B
FASTQ file (CLIP)
20170814-ju-16.fastq.gz
604.29 MB
20170814-ju-16_fastqc.zip
507.60 kB
PEKA
4mer analysis of 20170814-ju-16_mapped_to_genome.tar.gz
514.21 kB
FASTQ file (CLIP)
20170814-ju-15.fastq.gz
1.50 MB
20170814-ju-15_fastqc.zip
736.81 kB
Cutadapt (single-end)
20170814-ju-23_trimmed.fastq.gz
184.44 kB
Cutadapt (single-end)
20170814-ju-22_trimmed.fastq.gz
2.69 MB
Cutadapt (single-end)
20170814-ju-21_trimmed.fastq.gz
1.72 MB
Cutadapt (single-end)
20170814-ju-20_trimmed.fastq.gz
29.27 MB
Cutadapt (single-end)
20170814-ju-19_trimmed.fastq.gz
5.95 MB
Cutadapt (single-end)
20170814-ju-18_trimmed.fastq.gz
1000.91 kB
FASTQ file (CLIP)
20170814-ju-17.fastq.gz
1.47 GB
20170814-ju-17_fastqc.zip
520.90 kB
Cutadapt (single-end)
20170814-ju-15_trimmed.fastq.gz
284.93 kB
STAR
20170814-ju-23_trimmed_unmapped.out.mate1.fastq.gz
62.74 kB
20170814-ju-23_trimmed.bam.bai
1.43 MB
20170814-ju-23_trimmed.bam
429.15 kB
20170814-ju-23_trimmed_stats.txt
1.78 kB
20170814-ju-23_trimmed_SJ.out.tab
518 B
20170814-ju-23_trimmed.bw
16.83 kB
STAR
20170814-ju-22_trimmed_unmapped.out.mate1.fastq.gz
711.94 kB
20170814-ju-22_trimmed.bam.bai
1.60 MB
20170814-ju-22_trimmed.bam
7.68 MB
20170814-ju-22_trimmed_stats.txt
1.79 kB
20170814-ju-22_trimmed_SJ.out.tab
5.57 kB
20170814-ju-22_trimmed.bw
21.19 kB
Cutadapt (single-end)
20170814-ju-16_trimmed.fastq.gz
587.77 MB
STAR
20170814-ju-21_trimmed_unmapped.out.mate1.fastq.gz
1.35 MB
20170814-ju-21_trimmed.bam.bai
1.49 MB
20170814-ju-21_trimmed.bam
2.35 MB
20170814-ju-21_trimmed_stats.txt
1.78 kB
20170814-ju-21_trimmed_SJ.out.tab
1.30 kB
20170814-ju-21_trimmed.bw
17.45 kB
STAR
20170814-ju-19_trimmed_unmapped.out.mate1.fastq.gz
2.26 MB
20170814-ju-19_trimmed.bam.bai
2.40 MB
20170814-ju-19_trimmed.bam
17.95 MB
20170814-ju-19_trimmed_stats.txt
1.80 kB
20170814-ju-19_trimmed_SJ.out.tab
33.12 kB
20170814-ju-19_trimmed.bw
23.66 kB
STAR
20170814-ju-20_trimmed_unmapped.out.mate1.fastq.gz
26.71 MB
20170814-ju-20_trimmed.bam.bai
1.53 MB
20170814-ju-20_trimmed.bam
37.96 MB
20170814-ju-20_trimmed_stats.txt
1.79 kB
20170814-ju-20_trimmed_SJ.out.tab
3.36 kB
20170814-ju-20_trimmed.bw
17.92 kB
STAR
20170814-ju-18_trimmed_unmapped.out.mate1.fastq.gz
412.52 kB
20170814-ju-18_trimmed.bam.bai
1.56 MB
20170814-ju-18_trimmed.bam
2.64 MB
20170814-ju-18_trimmed_stats.txt
1.79 kB
20170814-ju-18_trimmed_SJ.out.tab
3.78 kB
20170814-ju-18_trimmed.bw
19.60 kB
STAR
20170814-ju-15_trimmed_unmapped.out.mate1.fastq.gz
118.91 kB
20170814-ju-15_trimmed.bam.bai
1.41 MB
20170814-ju-15_trimmed.bam
786.37 kB
20170814-ju-15_trimmed_stats.txt
1.78 kB
20170814-ju-15_trimmed_SJ.out.tab
217 B
20170814-ju-15_trimmed.bw
16.72 kB
iCount xlsites
20170814-ju-23_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-23_mapped_to_genome_single.bed.gz
5.05 kB
20170814-ju-23_mapped_to_genome_singleAndMulti.bed.gz
14.35 kB
20170814-ju-23_mapped_to_genome_reads_single.bed.gz
5.59 kB
20170814-ju-23_mapped_to_genome_single.bedgraph
16.13 kB
iCount xlsites
20170814-ju-22_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-22_mapped_to_genome_single.bed.gz
23.27 kB
20170814-ju-22_mapped_to_genome_singleAndMulti.bed.gz
130.89 kB
20170814-ju-22_mapped_to_genome_reads_single.bed.gz
26.36 kB
20170814-ju-22_mapped_to_genome_single.bedgraph
76.93 kB
Cutadapt (single-end)
20170814-ju-17_trimmed.fastq.gz
1.43 GB
iCount xlsites
20170814-ju-21_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-21_mapped_to_genome_single.bed.gz
11.43 kB
20170814-ju-21_mapped_to_genome_singleAndMulti.bed.gz
32.37 kB
20170814-ju-21_mapped_to_genome_reads_single.bed.gz
12.55 kB
20170814-ju-21_mapped_to_genome_single.bedgraph
37.29 kB
iCount xlsites
20170814-ju-19_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-19_mapped_to_genome_single.bed.gz
116.55 kB
20170814-ju-19_mapped_to_genome_singleAndMulti.bed.gz
574.30 kB
20170814-ju-19_mapped_to_genome_reads_single.bed.gz
129.96 kB
20170814-ju-19_mapped_to_genome_single.bedgraph
419.51 kB
iCount xlsites
20170814-ju-20_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-20_mapped_to_genome_single.bed.gz
12.19 kB
20170814-ju-20_mapped_to_genome_singleAndMulti.bed.gz
55.67 kB
20170814-ju-20_mapped_to_genome_reads_single.bed.gz
13.12 kB
20170814-ju-20_mapped_to_genome_single.bedgraph
38.75 kB
iCount xlsites
20170814-ju-18_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-18_mapped_to_genome_single.bed.gz
17.69 kB
20170814-ju-18_mapped_to_genome_singleAndMulti.bed.gz
92.78 kB
20170814-ju-18_mapped_to_genome_reads_single.bed.gz
19.49 kB
20170814-ju-18_mapped_to_genome_single.bedgraph
58.14 kB
iCount xlsites
20170814-ju-15_mapped_to_genome_skipped.bam
3.05 kB
20170814-ju-15_mapped_to_genome_single.bed.gz
2.98 kB
20170814-ju-15_mapped_to_genome_singleAndMulti.bed.gz
10.25 kB
20170814-ju-15_mapped_to_genome_reads_single.bed.gz
3.31 kB
20170814-ju-15_mapped_to_genome_single.bedgraph
9.19 kB
iCount summary
20170814-ju-23_mapped_to_genome_single_summary_type.tsv
561 B
20170814-ju-23_mapped_to_genome_single_summary_subtype.tsv
692 B
20170814-ju-23_mapped_to_genome_single_summary_gene.tsv
60.56 kB
iCount RNA-maps
20170814-ju-23_mapped_to_genome_single.tar.gz
192.32 kB
Paraclu
20170814-ju-23_mapped_to_genome_single_peaks.bed.gz
74 B
iCount summary
20170814-ju-22_mapped_to_genome_single_summary_type.tsv
575 B
20170814-ju-22_mapped_to_genome_single_summary_subtype.tsv
962 B
20170814-ju-22_mapped_to_genome_single_summary_gene.tsv
238.23 kB
iCount RNA-maps
20170814-ju-22_mapped_to_genome_single.tar.gz
306.14 kB
Paraclu
20170814-ju-22_mapped_to_genome_single_peaks.bed.gz
100 B
STAR
20170814-ju-16_trimmed_unmapped.out.mate1.fastq.gz
161.50 MB
20170814-ju-16_trimmed.bam.bai
4.59 MB
20170814-ju-16_trimmed.bam
1.25 GB
20170814-ju-16_trimmed_stats.txt
1.82 kB
20170814-ju-16_trimmed_SJ.out.tab
457.24 kB
iCount summary
20170814-ju-21_mapped_to_genome_single_summary_type.tsv
569 B
20170814-ju-21_mapped_to_genome_single_summary_subtype.tsv
698 B
20170814-ju-21_mapped_to_genome_single_summary_gene.tsv
125.08 kB
iCount RNA-maps
20170814-ju-21_mapped_to_genome_single.tar.gz
233.15 kB
Paraclu
20170814-ju-21_mapped_to_genome_single_peaks.bed.gz
119 B
iCount summary
20170814-ju-19_mapped_to_genome_single_summary_type.tsv
590 B
20170814-ju-19_mapped_to_genome_single_summary_subtype.tsv
978 B
20170814-ju-19_mapped_to_genome_single_summary_gene.tsv
811.75 kB
iCount RNA-maps
20170814-ju-19_mapped_to_genome_single.tar.gz
413.16 kB
Paraclu
20170814-ju-19_mapped_to_genome_single_peaks.bed.gz
294 B
iCount summary
20170814-ju-20_mapped_to_genome_single_summary_type.tsv
580 B
20170814-ju-20_mapped_to_genome_single_summary_subtype.tsv
641 B
20170814-ju-20_mapped_to_genome_single_summary_gene.tsv
89.59 kB
PEKA
4mer analysis of 20170814-ju-19_mapped_to_genome.tar.gz
69.66 kB
iCount RNA-maps
20170814-ju-20_mapped_to_genome_single.tar.gz
228.74 kB
Paraclu
20170814-ju-20_mapped_to_genome_single_peaks.bed.gz
468 B
iCount summary
20170814-ju-18_mapped_to_genome_single_summary_type.tsv
575 B
20170814-ju-18_mapped_to_genome_single_summary_subtype.tsv
889 B
20170814-ju-18_mapped_to_genome_single_summary_gene.tsv
185.28 kB
PEKA
4mer analysis of 20170814-ju-20_mapped_to_genome.tar.gz
149 B
iCount RNA-maps
20170814-ju-18_mapped_to_genome_single.tar.gz
289.05 kB
Paraclu
20170814-ju-18_mapped_to_genome_single_peaks.bed.gz
149 B
iCount summary
20170814-ju-15_mapped_to_genome_single_summary_type.tsv
563 B
20170814-ju-15_mapped_to_genome_single_summary_subtype.tsv
690 B
20170814-ju-15_mapped_to_genome_single_summary_gene.tsv
34.22 kB
iCount RNA-maps
20170814-ju-15_mapped_to_genome_single.tar.gz
88.95 kB
Paraclu
20170814-ju-15_mapped_to_genome_single_peaks.bed.gz
74 B
PEKA
4mer analysis of 20170814-ju-15_mapped_to_genome.tar.gz
151 B
PEKA
4mer analysis of 20170814-ju-23_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170814-ju-22_mapped_to_genome.tar.gz
150 B
STAR
20170814-ju-17_trimmed_unmapped.out.mate1.fastq.gz
370.67 MB
20170814-ju-17_trimmed.bam.bai
6.26 MB
20170814-ju-17_trimmed.bam
5.00 GB
20170814-ju-17_trimmed_stats.txt
1.82 kB
20170814-ju-17_trimmed_SJ.out.tab
936.66 kB
PEKA
4mer analysis of 20170814-ju-21_mapped_to_genome.tar.gz
150 B
iCount xlsites
20170814-ju-16_mapped_to_genome_skipped.bam
12.41 kB
20170814-ju-16_mapped_to_genome_single.bed.gz
1.48 MB
20170814-ju-16_mapped_to_genome_singleAndMulti.bed.gz
5.01 MB
20170814-ju-16_mapped_to_genome_reads_single.bed.gz
1.76 MB
20170814-ju-16_mapped_to_genome_single.bedgraph
5.83 MB
iCount summary
20170814-ju-16_mapped_to_genome_single_summary_type.tsv
619 B
20170814-ju-16_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
20170814-ju-16_mapped_to_genome_single_summary_gene.tsv
2.14 MB
FASTQ file (CLIP)
20170509-ju-22.fastq.gz
76.79 MB
20170509-ju-22_fastqc.zip
723.77 kB
iCount RNA-maps
20170814-ju-16_mapped_to_genome_single.tar.gz
727.55 kB
Paraclu
20170814-ju-16_mapped_to_genome_single_peaks.bed.gz
4.92 kB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
551.85 MB
demux_nomatch_fastqc.zip
492.82 kB
FASTQ file (CLIP)
20170509-ju-3.fastq.gz
179.78 MB
20170509-ju-3_fastqc.zip
550.88 kB
FASTQ file (CLIP)
20170509-ju-2.fastq.gz
329.55 MB
20170509-ju-2_fastqc.zip
517.42 kB
FASTQ file (CLIP)
20170509-ju-8.fastq.gz
246.52 MB
20170509-ju-8_fastqc.zip
582.75 kB
FASTQ file (CLIP)
20170509-ju-9.fastq.gz
80.95 MB
20170509-ju-9_fastqc.zip
620.71 kB
FASTQ file (CLIP)
20170509-ju-11.fastq.gz
440.30 kB
20170509-ju-11_fastqc.zip
780.66 kB
FASTQ file (CLIP)
20170509-ju-10.fastq.gz
6.80 MB
20170509-ju-10_fastqc.zip
639.32 kB
FASTQ file (CLIP)
20170509-ju-14.fastq.gz
4.28 MB
20170509-ju-14_fastqc.zip
771.62 kB
FASTQ file (CLIP)
20170509-ju-12.fastq.gz
26.12 MB
20170509-ju-12_fastqc.zip
575.59 kB
FASTQ file (CLIP)
20170509-ju-16.fastq.gz
269.11 MB
20170509-ju-16_fastqc.zip
598.19 kB
FASTQ file (CLIP)
20170509-ju-19.fastq.gz
332.74 MB
20170509-ju-19_fastqc.zip
544.70 kB
FASTQ file (CLIP)
20170509-ju-23.fastq.gz
4.69 MB
20170509-ju-23_fastqc.zip
977.82 kB
FASTQ file (CLIP)
20170509-ju-26.fastq.gz
20.20 MB
20170509-ju-26_fastqc.zip
764.25 kB
FASTQ file (CLIP)
20170509-ju-27.fastq.gz
1017.22 kB
20170509-ju-27_fastqc.zip
899.12 kB
FASTQ file (CLIP)
20170509-ju-30.fastq.gz
43.50 MB
20170509-ju-30_fastqc.zip
926.60 kB
iCount RNA-maps
20170509-ju-30_mapped_to_genome_single.tar.gz
291.87 kB
FASTQ file (CLIP)
20170509-ju-29.fastq.gz
388.63 MB
20170509-ju-29_fastqc.zip
843.78 kB
PEKA
4mer analysis of 20170509-ju-29_mapped_to_genome.tar.gz
151.49 kB
FASTQ file (CLIP)
20170509-ju-28.fastq.gz
1.75 MB
20170509-ju-28_fastqc.zip
968.27 kB
PEKA
4mer analysis of 20170509-ju-28_mapped_to_genome.tar.gz
151 B
FASTQ file (CLIP)
20170509-ju-25.fastq.gz
189.36 MB
20170509-ju-25_fastqc.zip
951.03 kB
iCount RNA-maps
20170509-ju-25_mapped_to_genome_single.tar.gz
211.02 kB
PEKA
4mer analysis of 20170509-ju-25_mapped_to_genome.tar.gz
150 B
FASTQ file (CLIP)
20170509-ju-24.fastq.gz
1.38 MB
20170509-ju-24_fastqc.zip
894.49 kB
Paraclu
20170509-ju-24_mapped_to_genome_single_peaks.bed.gz
100 B
PEKA
4mer analysis of 20170509-ju-24_mapped_to_genome.tar.gz
151 B
PEKA
4mer analysis of 20170509-ju-23_mapped_to_genome.tar.gz
151 B
PEKA
4mer analysis of 20170509-ju-22_mapped_to_genome.tar.gz
68.38 kB
FASTQ file (CLIP)
20170509-ju-21.fastq.gz
3.06 MB
20170509-ju-21_fastqc.zip
938.62 kB
iCount RNA-maps
20170509-ju-21_mapped_to_genome_single.tar.gz
280.79 kB
PEKA
4mer analysis of 20170509-ju-21_mapped_to_genome.tar.gz
150 B
FASTQ file (CLIP)
20170509-ju-20.fastq.gz
156.16 MB
20170509-ju-20_fastqc.zip
604.63 kB
iCount RNA-maps
20170509-ju-20_mapped_to_genome_single.tar.gz
428.75 kB
PEKA
4mer analysis of 20170509-ju-20_mapped_to_genome.tar.gz
244.69 kB
iCount RNA-maps
20170509-ju-19_mapped_to_genome_single.tar.gz
513.76 kB
FASTQ file (CLIP)
20170509-ju-18.fastq.gz
1.25 MB
20170509-ju-18_fastqc.zip
927.83 kB
iCount RNA-maps
20170509-ju-18_mapped_to_genome_single.tar.gz
248.18 kB
FASTQ file (CLIP)
20170509-ju-17.fastq.gz
1.33 MB
20170509-ju-17_fastqc.zip
906.53 kB
iCount RNA-maps
20170509-ju-17_mapped_to_genome_single.tar.gz
236.23 kB
FASTQ file (CLIP)
20170509-ju-15.fastq.gz
3.72 MB
20170509-ju-15_fastqc.zip
943.38 kB
FASTQ file (CLIP)
20170509-ju-13.fastq.gz
12.02 MB
20170509-ju-13_fastqc.zip
641.09 kB
Paraclu
20170509-ju-13_mapped_to_genome_single_peaks.bed.gz
179 B
PEKA
4mer analysis of 20170509-ju-13_mapped_to_genome.tar.gz
150 B
Paraclu
20170509-ju-12_mapped_to_genome_single_peaks.bed.gz
321 B
PEKA
4mer analysis of 20170509-ju-12_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170509-ju-11_mapped_to_genome.tar.gz
151 B
Paraclu
20170509-ju-10_mapped_to_genome_single_peaks.bed.gz
202 B
PEKA
4mer analysis of 20170509-ju-10_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170509-ju-9_mapped_to_genome.tar.gz
68.00 kB
FASTQ file (CLIP)
20170509-ju-7.fastq.gz
117.66 MB
20170509-ju-7_fastqc.zip
582.93 kB
PEKA
4mer analysis of 20170509-ju-7_mapped_to_genome.tar.gz
143.33 kB
FASTQ file (CLIP)
20170509-ju-6.fastq.gz
172.96 MB
20170509-ju-6_fastqc.zip
513.53 kB
FASTQ file (CLIP)
20170509-ju-5.fastq.gz
31.99 MB
20170509-ju-5_fastqc.zip
646.25 kB
Paraclu
20170509-ju-5_mapped_to_genome_single_peaks.bed.gz
391 B
FASTQ file (CLIP)
20170509-ju-4.fastq.gz
78.77 MB
20170509-ju-4_fastqc.zip
548.39 kB
Paraclu
20170509-ju-4_mapped_to_genome_single_peaks.bed.gz
1.35 kB
PEKA
4mer analysis of 20170509-ju-4_mapped_to_genome.tar.gz
143.30 kB
iCount RNA-maps
20170509-ju-3_mapped_to_genome_single.tar.gz
407.28 kB
FASTQ file (CLIP)
20170509-ju-1.fastq.gz
58.13 MB
20170509-ju-1_fastqc.zip
575.50 kB
PEKA
4mer analysis of 20170509-ju-1_mapped_to_genome.tar.gz
156.29 kB
Cutadapt (single-end)
20170509-ju-30_trimmed.fastq.gz
41.44 MB
Cutadapt (single-end)
20170509-ju-29_trimmed.fastq.gz
55.78 MB
Cutadapt (single-end)
20170509-ju-28_trimmed.fastq.gz
1.19 MB
Cutadapt (single-end)
20170509-ju-27_trimmed.fastq.gz
727.42 kB
Cutadapt (single-end)
20170509-ju-26_trimmed.fastq.gz
13.87 MB
Cutadapt (single-end)
20170509-ju-25_trimmed.fastq.gz
168.42 MB
Cutadapt (single-end)
20170509-ju-24_trimmed.fastq.gz
740.80 kB
Cutadapt (single-end)
20170509-ju-23_trimmed.fastq.gz
3.79 MB
Cutadapt (single-end)
20170509-ju-22_trimmed.fastq.gz
62.79 MB
Cutadapt (single-end)
20170509-ju-21_trimmed.fastq.gz
2.26 MB
Cutadapt (single-end)
20170509-ju-20_trimmed.fastq.gz
140.02 MB
Cutadapt (single-end)
20170509-ju-19_trimmed.fastq.gz
321.75 MB
Cutadapt (single-end)
20170509-ju-18_trimmed.fastq.gz
1016.05 kB
Cutadapt (single-end)
20170509-ju-17_trimmed.fastq.gz
1019.19 kB
Cutadapt (single-end)
20170509-ju-16_trimmed.fastq.gz
234.15 MB
Cutadapt (single-end)
20170509-ju-15_trimmed.fastq.gz
1.57 MB
Cutadapt (single-end)
20170509-ju-14_trimmed.fastq.gz
1.63 MB
Cutadapt (single-end)
20170509-ju-13_trimmed.fastq.gz
9.16 MB
Cutadapt (single-end)
20170509-ju-12_trimmed.fastq.gz
21.19 MB
Cutadapt (single-end)
20170509-ju-11_trimmed.fastq.gz
331.92 kB
Cutadapt (single-end)
20170509-ju-10_trimmed.fastq.gz
6.68 MB
Cutadapt (single-end)
20170509-ju-9_trimmed.fastq.gz
59.08 MB
Cutadapt (single-end)
20170509-ju-8_trimmed.fastq.gz
224.69 MB
Cutadapt (single-end)
20170509-ju-7_trimmed.fastq.gz
84.05 MB
Cutadapt (single-end)
20170509-ju-6_trimmed.fastq.gz
168.13 MB
Cutadapt (single-end)
20170509-ju-5_trimmed.fastq.gz
22.28 MB
Cutadapt (single-end)
20170509-ju-4_trimmed.fastq.gz
66.39 MB
Cutadapt (single-end)
20170509-ju-3_trimmed.fastq.gz
172.18 MB
Cutadapt (single-end)
20170509-ju-1_trimmed.fastq.gz
56.75 MB
Cutadapt (single-end)
20170509-ju-2_trimmed.fastq.gz
321.95 MB
STAR
20170509-ju-30_trimmed_unmapped.out.mate1.fastq.gz
40.41 MB
20170509-ju-30_trimmed.bam.bai
1.53 MB
20170509-ju-30_trimmed.bam
50.72 MB
20170509-ju-30_trimmed_stats.txt
1.79 kB
20170509-ju-30_trimmed_SJ.out.tab
3.54 kB
20170509-ju-30_trimmed.bw
18.22 kB
STAR
20170509-ju-28_trimmed_unmapped.out.mate1.fastq.gz
941.70 kB
20170509-ju-28_trimmed.bam.bai
1.44 MB
20170509-ju-28_trimmed.bam
1.81 MB
20170509-ju-28_trimmed_stats.txt
1.78 kB
20170509-ju-28_trimmed_SJ.out.tab
831 B
20170509-ju-28_trimmed.bw
17.91 kB
STAR
20170509-ju-27_trimmed_unmapped.out.mate1.fastq.gz
414.43 kB
20170509-ju-27_trimmed.bam.bai
1.44 MB
20170509-ju-27_trimmed.bam
2.11 MB
20170509-ju-27_trimmed_stats.txt
1.78 kB
20170509-ju-27_trimmed_SJ.out.tab
792 B
20170509-ju-27_trimmed.bw
18.25 kB
STAR
20170509-ju-26_trimmed_unmapped.out.mate1.fastq.gz
6.47 MB
20170509-ju-26_trimmed.bam.bai
1.57 MB
20170509-ju-26_trimmed.bam
35.75 MB
20170509-ju-26_trimmed_stats.txt
1.79 kB
20170509-ju-26_trimmed_SJ.out.tab
3.58 kB
20170509-ju-26_trimmed.bw
19.54 kB
STAR
20170509-ju-29_trimmed_unmapped.out.mate1.fastq.gz
37.03 MB
20170509-ju-29_trimmed.bam.bai
2.22 MB
20170509-ju-29_trimmed.bam
106.36 MB
20170509-ju-29_trimmed_stats.txt
1.80 kB
20170509-ju-29_trimmed_SJ.out.tab
19.99 kB
STAR
20170509-ju-24_trimmed_unmapped.out.mate1.fastq.gz
460.52 kB
20170509-ju-24_trimmed.bam.bai
1.43 MB
20170509-ju-24_trimmed.bam
1.85 MB
20170509-ju-24_trimmed_stats.txt
1.79 kB
20170509-ju-24_trimmed_SJ.out.tab
1.24 kB
20170509-ju-24_trimmed.bw
17.71 kB
STAR
20170509-ju-23_trimmed_unmapped.out.mate1.fastq.gz
3.49 MB
20170509-ju-23_trimmed.bam.bai
1.43 MB
20170509-ju-23_trimmed.bam
5.02 MB
20170509-ju-23_trimmed_stats.txt
1.78 kB
20170509-ju-23_trimmed_SJ.out.tab
942 B
20170509-ju-23_trimmed.bw
17.40 kB
STAR
20170509-ju-22_trimmed_unmapped.out.mate1.fastq.gz
25.86 MB
20170509-ju-22_trimmed.bam.bai
1.72 MB
20170509-ju-22_trimmed.bam
137.57 MB
20170509-ju-22_trimmed_stats.txt
1.80 kB
20170509-ju-22_trimmed_SJ.out.tab
12.76 kB
STAR
20170509-ju-21_trimmed_unmapped.out.mate1.fastq.gz
2.08 MB
20170509-ju-21_trimmed.bam.bai
1.43 MB
20170509-ju-21_trimmed.bam
3.06 MB
20170509-ju-21_trimmed_stats.txt
1.78 kB
20170509-ju-21_trimmed_SJ.out.tab
1.71 kB
20170509-ju-21_trimmed.bw
16.89 kB
STAR
20170509-ju-25_trimmed_unmapped.out.mate1.fastq.gz
168.69 MB
20170509-ju-25_trimmed.bam.bai
1.49 MB
20170509-ju-25_trimmed.bam
206.29 MB
20170509-ju-25_trimmed_stats.txt
1.79 kB
20170509-ju-25_trimmed_SJ.out.tab
2.37 kB
20170509-ju-25_trimmed.bw
17.90 kB
STAR
20170509-ju-20_trimmed_unmapped.out.mate1.fastq.gz
46.14 MB
20170509-ju-20_trimmed.bam.bai
3.20 MB
20170509-ju-20_trimmed.bam
542.86 MB
20170509-ju-20_trimmed_stats.txt
1.80 kB
20170509-ju-20_trimmed_SJ.out.tab
61.30 kB
STAR
20170509-ju-18_trimmed_unmapped.out.mate1.fastq.gz
692.83 kB
20170509-ju-18_trimmed.bam.bai
1.43 MB
20170509-ju-18_trimmed.bam
2.07 MB
20170509-ju-18_trimmed_stats.txt
1.79 kB
20170509-ju-18_trimmed_SJ.out.tab
1.08 kB
20170509-ju-18_trimmed.bw
17.40 kB
STAR
20170509-ju-17_trimmed_unmapped.out.mate1.fastq.gz
596.71 kB
20170509-ju-17_trimmed.bam.bai
1.46 MB
20170509-ju-17_trimmed.bam
2.14 MB
20170509-ju-17_trimmed_stats.txt
1.79 kB
20170509-ju-17_trimmed_SJ.out.tab
1.56 kB
20170509-ju-17_trimmed.bw
17.76 kB
STAR
20170509-ju-19_trimmed_unmapped.out.mate1.fastq.gz
98.86 MB
20170509-ju-19_trimmed.bam.bai
4.39 MB
20170509-ju-19_trimmed.bam
960.73 MB
20170509-ju-19_trimmed_stats.txt
1.81 kB
20170509-ju-19_trimmed_SJ.out.tab
174.68 kB
STAR
20170509-ju-15_trimmed_unmapped.out.mate1.fastq.gz
1.25 MB
20170509-ju-15_trimmed.bam.bai
1.41 MB
20170509-ju-15_trimmed.bam
2.81 MB
20170509-ju-15_trimmed_stats.txt
1.78 kB
20170509-ju-15_trimmed_SJ.out.tab
949 B
20170509-ju-15_trimmed.bw
17.50 kB
STAR
20170509-ju-14_trimmed_unmapped.out.mate1.fastq.gz
742.77 kB
20170509-ju-14_trimmed.bam.bai
1.43 MB
20170509-ju-14_trimmed.bam
5.66 MB
20170509-ju-14_trimmed_stats.txt
1.78 kB
20170509-ju-14_trimmed_SJ.out.tab
1.46 kB
20170509-ju-14_trimmed.bw
17.89 kB
STAR
20170509-ju-16_trimmed_unmapped.out.mate1.fastq.gz
83.14 MB
20170509-ju-16_trimmed.bam.bai
4.74 MB
20170509-ju-16_trimmed.bam
382.27 MB
20170509-ju-16_trimmed_stats.txt
1.81 kB
20170509-ju-16_trimmed_SJ.out.tab
539.34 kB
STAR
20170509-ju-13_trimmed_unmapped.out.mate1.fastq.gz
1.27 MB
20170509-ju-13_trimmed.bam.bai
1.46 MB
20170509-ju-13_trimmed.bam
39.95 MB
20170509-ju-13_trimmed_stats.txt
1.79 kB
20170509-ju-13_trimmed_SJ.out.tab
1.73 kB
20170509-ju-13_trimmed.bw
19.35 kB
STAR
20170509-ju-12_trimmed_unmapped.out.mate1.fastq.gz
2.29 MB
20170509-ju-12_trimmed.bam.bai
1.54 MB
20170509-ju-12_trimmed.bam
87.93 MB
20170509-ju-12_trimmed_stats.txt
1.80 kB
20170509-ju-12_trimmed_SJ.out.tab
4.85 kB
STAR
20170509-ju-11_trimmed_unmapped.out.mate1.fastq.gz
125.19 kB
20170509-ju-11_trimmed.bam.bai
1.43 MB
20170509-ju-11_trimmed.bam
1.15 MB
20170509-ju-11_trimmed_stats.txt
1.78 kB
20170509-ju-11_trimmed_SJ.out.tab
652 B
20170509-ju-11_trimmed.bw
17.23 kB
STAR
20170509-ju-10_trimmed_unmapped.out.mate1.fastq.gz
1.18 MB
20170509-ju-10_trimmed.bam.bai
1.51 MB
20170509-ju-10_trimmed.bam
23.46 MB
20170509-ju-10_trimmed_stats.txt
1.79 kB
20170509-ju-10_trimmed_SJ.out.tab
2.45 kB
20170509-ju-10_trimmed.bw
19.64 kB
STAR
20170509-ju-9_trimmed_unmapped.out.mate1.fastq.gz
11.34 MB
20170509-ju-9_trimmed.bam.bai
1.80 MB
20170509-ju-9_trimmed.bam
234.70 MB
20170509-ju-9_trimmed_stats.txt
1.80 kB
20170509-ju-9_trimmed_SJ.out.tab
12.04 kB
STAR
20170509-ju-7_trimmed_unmapped.out.mate1.fastq.gz
18.03 MB
20170509-ju-7_trimmed.bam.bai
1.89 MB
20170509-ju-7_trimmed.bam
299.90 MB
20170509-ju-7_trimmed_stats.txt
1.81 kB
20170509-ju-7_trimmed_SJ.out.tab
19.62 kB
STAR
20170509-ju-8_trimmed_unmapped.out.mate1.fastq.gz
40.07 MB
20170509-ju-8_trimmed.bam.bai
2.73 MB
20170509-ju-8_trimmed.bam
749.41 MB
20170509-ju-8_trimmed_stats.txt
1.81 kB
20170509-ju-8_trimmed_SJ.out.tab
45.89 kB
STAR
20170509-ju-5_trimmed_unmapped.out.mate1.fastq.gz
4.56 MB
20170509-ju-5_trimmed.bam.bai
1.59 MB
20170509-ju-5_trimmed.bam
78.95 MB
20170509-ju-5_trimmed_stats.txt
1.80 kB
20170509-ju-5_trimmed_SJ.out.tab
7.60 kB
STAR
20170509-ju-6_trimmed_unmapped.out.mate1.fastq.gz
19.77 MB
20170509-ju-6_trimmed.bam.bai
2.16 MB
20170509-ju-6_trimmed.bam
663.23 MB
20170509-ju-6_trimmed_stats.txt
1.81 kB
20170509-ju-6_trimmed_SJ.out.tab
35.32 kB
STAR
20170509-ju-4_trimmed_unmapped.out.mate1.fastq.gz
14.66 MB
20170509-ju-4_trimmed.bam.bai
2.02 MB
20170509-ju-4_trimmed.bam
195.67 MB
20170509-ju-4_trimmed_stats.txt
1.80 kB
20170509-ju-4_trimmed_SJ.out.tab
27.46 kB
STAR
20170509-ju-1_trimmed_unmapped.out.mate1.fastq.gz
8.45 MB
20170509-ju-1_trimmed.bam.bai
2.06 MB
20170509-ju-1_trimmed.bam
138.25 MB
20170509-ju-1_trimmed_stats.txt
1.80 kB
20170509-ju-1_trimmed_SJ.out.tab
21.87 kB
STAR
20170509-ju-3_trimmed_unmapped.out.mate1.fastq.gz
21.06 MB
20170509-ju-3_trimmed.bam.bai
2.59 MB
20170509-ju-3_trimmed.bam
714.48 MB
20170509-ju-3_trimmed_stats.txt
1.81 kB
20170509-ju-3_trimmed_SJ.out.tab
46.03 kB
iCount xlsites
20170509-ju-30_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-30_mapped_to_genome_single.bed.gz
10.01 kB
20170509-ju-30_mapped_to_genome_singleAndMulti.bed.gz
55.47 kB
20170509-ju-30_mapped_to_genome_reads_single.bed.gz
10.89 kB
20170509-ju-30_mapped_to_genome_single.bedgraph
32.05 kB
iCount xlsites
20170509-ju-28_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-28_mapped_to_genome_single.bed.gz
3.04 kB
20170509-ju-28_mapped_to_genome_singleAndMulti.bed.gz
21.13 kB
20170509-ju-28_mapped_to_genome_reads_single.bed.gz
3.20 kB
20170509-ju-28_mapped_to_genome_single.bedgraph
9.39 kB
iCount xlsites
20170509-ju-27_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-27_mapped_to_genome_single.bed.gz
2.10 kB
20170509-ju-27_mapped_to_genome_singleAndMulti.bed.gz
20.93 kB
20170509-ju-27_mapped_to_genome_reads_single.bed.gz
2.19 kB
20170509-ju-27_mapped_to_genome_single.bedgraph
6.42 kB
iCount xlsites
20170509-ju-26_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-26_mapped_to_genome_single.bed.gz
11.03 kB
20170509-ju-26_mapped_to_genome_singleAndMulti.bed.gz
85.57 kB
20170509-ju-26_mapped_to_genome_reads_single.bed.gz
11.70 kB
20170509-ju-26_mapped_to_genome_single.bedgraph
35.13 kB
iCount xlsites
20170509-ju-29_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-29_mapped_to_genome_single.bed.gz
64.49 kB
20170509-ju-29_mapped_to_genome_singleAndMulti.bed.gz
478.33 kB
20170509-ju-29_mapped_to_genome_reads_single.bed.gz
67.38 kB
20170509-ju-29_mapped_to_genome_single.bedgraph
217.08 kB
iCount xlsites
20170509-ju-24_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-24_mapped_to_genome_single.bed.gz
2.60 kB
20170509-ju-24_mapped_to_genome_singleAndMulti.bed.gz
18.20 kB
20170509-ju-24_mapped_to_genome_reads_single.bed.gz
2.74 kB
20170509-ju-24_mapped_to_genome_single.bedgraph
7.89 kB
iCount xlsites
20170509-ju-23_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-23_mapped_to_genome_single.bed.gz
3.10 kB
20170509-ju-23_mapped_to_genome_singleAndMulti.bed.gz
16.62 kB
20170509-ju-23_mapped_to_genome_reads_single.bed.gz
3.28 kB
20170509-ju-23_mapped_to_genome_single.bedgraph
9.52 kB
Paraclu
20170509-ju-23_mapped_to_genome_single_peaks.bed.gz
74 B
STAR
20170509-ju-2_trimmed_unmapped.out.mate1.fastq.gz
55.11 MB
20170509-ju-2_trimmed.bam.bai
3.63 MB
20170509-ju-2_trimmed.bam
922.23 MB
20170509-ju-2_trimmed_stats.txt
1.81 kB
20170509-ju-2_trimmed_SJ.out.tab
124.76 kB
iCount xlsites
20170509-ju-21_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-21_mapped_to_genome_single.bed.gz
5.78 kB
20170509-ju-21_mapped_to_genome_singleAndMulti.bed.gz
14.87 kB
20170509-ju-21_mapped_to_genome_reads_single.bed.gz
6.13 kB
20170509-ju-21_mapped_to_genome_single.bedgraph
18.49 kB
iCount xlsites
20170509-ju-25_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-25_mapped_to_genome_single.bed.gz
5.56 kB
20170509-ju-25_mapped_to_genome_singleAndMulti.bed.gz
36.29 kB
20170509-ju-25_mapped_to_genome_reads_single.bed.gz
5.82 kB
20170509-ju-25_mapped_to_genome_single.bedgraph
17.31 kB
iCount xlsites
20170509-ju-22_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-22_mapped_to_genome_single.bed.gz
30.82 kB
20170509-ju-22_mapped_to_genome_singleAndMulti.bed.gz
198.81 kB
20170509-ju-22_mapped_to_genome_reads_single.bed.gz
33.19 kB
20170509-ju-22_mapped_to_genome_single.bedgraph
100.10 kB
Paraclu
20170509-ju-22_mapped_to_genome_single_peaks.bed.gz
823 B
iCount xlsites
20170509-ju-18_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-18_mapped_to_genome_single.bed.gz
2.67 kB
20170509-ju-18_mapped_to_genome_singleAndMulti.bed.gz
17.78 kB
20170509-ju-18_mapped_to_genome_reads_single.bed.gz
2.84 kB
20170509-ju-18_mapped_to_genome_single.bedgraph
8.22 kB
iCount xlsites
20170509-ju-17_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-17_mapped_to_genome_single.bed.gz
5.14 kB
20170509-ju-17_mapped_to_genome_singleAndMulti.bed.gz
28.02 kB
20170509-ju-17_mapped_to_genome_reads_single.bed.gz
5.54 kB
20170509-ju-17_mapped_to_genome_single.bedgraph
16.19 kB
iCount xlsites
20170509-ju-20_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-20_mapped_to_genome_single.bed.gz
164.42 kB
20170509-ju-20_mapped_to_genome_singleAndMulti.bed.gz
1.25 MB
20170509-ju-20_mapped_to_genome_reads_single.bed.gz
172.71 kB
20170509-ju-20_mapped_to_genome_single.bedgraph
577.05 kB
Paraclu
20170509-ju-20_mapped_to_genome_single_peaks.bed.gz
2.71 kB
iCount xlsites
20170509-ju-15_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-15_mapped_to_genome_single.bed.gz
2.05 kB
20170509-ju-15_mapped_to_genome_singleAndMulti.bed.gz
14.16 kB
20170509-ju-15_mapped_to_genome_reads_single.bed.gz
2.16 kB
20170509-ju-15_mapped_to_genome_single.bedgraph
6.25 kB
iCount xlsites
20170509-ju-14_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-14_mapped_to_genome_single.bed.gz
2.72 kB
20170509-ju-14_mapped_to_genome_singleAndMulti.bed.gz
20.74 kB
20170509-ju-14_mapped_to_genome_reads_single.bed.gz
2.85 kB
20170509-ju-14_mapped_to_genome_single.bedgraph
8.35 kB
iCount xlsites
20170509-ju-16_mapped_to_genome_skipped.bam
3.39 kB
20170509-ju-16_mapped_to_genome_single.bed.gz
1.78 MB
20170509-ju-16_mapped_to_genome_singleAndMulti.bed.gz
8.26 MB
20170509-ju-16_mapped_to_genome_reads_single.bed.gz
2.01 MB
20170509-ju-16_mapped_to_genome_single.bedgraph
7.46 MB
PEKA
5mer analysis of 20170509-ju-2_mapped_to_genome.tar.gz
796.58 kB
iCount xlsites
20170509-ju-13_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-13_mapped_to_genome_single.bed.gz
4.57 kB
20170509-ju-13_mapped_to_genome_singleAndMulti.bed.gz
51.79 kB
20170509-ju-13_mapped_to_genome_reads_single.bed.gz
4.78 kB
20170509-ju-13_mapped_to_genome_single.bedgraph
14.47 kB
iCount xlsites
20170509-ju-12_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-12_mapped_to_genome_single.bed.gz
9.69 kB
20170509-ju-12_mapped_to_genome_singleAndMulti.bed.gz
86.09 kB
20170509-ju-12_mapped_to_genome_reads_single.bed.gz
10.26 kB
20170509-ju-12_mapped_to_genome_single.bedgraph
31.79 kB
PEKA
5mer analysis of 20170814-ju-16_mapped_to_genome.tar.gz
1.12 MB
iCount xlsites
20170509-ju-11_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-11_mapped_to_genome_single.bed.gz
2.00 kB
20170509-ju-11_mapped_to_genome_singleAndMulti.bed.gz
13.04 kB
20170509-ju-11_mapped_to_genome_reads_single.bed.gz
2.13 kB
20170509-ju-11_mapped_to_genome_single.bedgraph
6.10 kB
PEKA
5mer analysis of 20171130-rb-2_mapped_to_genome.tar.gz
763.19 kB
Paraclu
20170509-ju-11_mapped_to_genome_single_peaks.bed.gz
74 B
iCount xlsites
20170509-ju-19_mapped_to_genome_skipped.bam
3.22 kB
20170509-ju-19_mapped_to_genome_single.bed.gz
425.58 kB
20170509-ju-19_mapped_to_genome_singleAndMulti.bed.gz
2.92 MB
20170509-ju-19_mapped_to_genome_reads_single.bed.gz
456.22 kB
20170509-ju-19_mapped_to_genome_single.bedgraph
1.49 MB
PEKA
5mer analysis of 20170509-ju-3_mapped_to_genome.tar.gz
618.98 kB
PEKA
5mer analysis of 20170509-ju-19_mapped_to_genome.tar.gz
808.65 kB
PEKA
5mer analysis of 20170814-ju-17_mapped_to_genome.tar.gz
1.23 MB
iCount xlsites
20170509-ju-10_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-10_mapped_to_genome_single.bed.gz
6.48 kB
20170509-ju-10_mapped_to_genome_singleAndMulti.bed.gz
57.06 kB
20170509-ju-10_mapped_to_genome_reads_single.bed.gz
6.85 kB
20170509-ju-10_mapped_to_genome_single.bedgraph
20.65 kB
iCount xlsites
20170509-ju-9_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-9_mapped_to_genome_single.bed.gz
33.51 kB
20170509-ju-9_mapped_to_genome_singleAndMulti.bed.gz
253.76 kB
20170509-ju-9_mapped_to_genome_reads_single.bed.gz
35.66 kB
20170509-ju-9_mapped_to_genome_single.bedgraph
112.90 kB
iCount xlsites
20170509-ju-7_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-7_mapped_to_genome_single.bed.gz
40.88 kB
20170509-ju-7_mapped_to_genome_singleAndMulti.bed.gz
332.31 kB
20170509-ju-7_mapped_to_genome_reads_single.bed.gz
43.59 kB
20170509-ju-7_mapped_to_genome_single.bedgraph
138.95 kB
Paraclu
20170509-ju-7_mapped_to_genome_single_peaks.bed.gz
1.70 kB
iCount xlsites
20170509-ju-5_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-5_mapped_to_genome_single.bed.gz
14.07 kB
20170509-ju-5_mapped_to_genome_singleAndMulti.bed.gz
111.29 kB
20170509-ju-5_mapped_to_genome_reads_single.bed.gz
14.97 kB
20170509-ju-5_mapped_to_genome_single.bedgraph
45.61 kB
iCount xlsites
20170814-ju-17_mapped_to_genome_skipped.bam
9.51 kB
20170814-ju-17_mapped_to_genome_single.bed.gz
2.32 MB
20170814-ju-17_mapped_to_genome_singleAndMulti.bed.gz
9.36 MB
20170814-ju-17_mapped_to_genome_reads_single.bed.gz
2.73 MB
20170814-ju-17_mapped_to_genome_single.bedgraph
9.26 MB
iCount xlsites
20170509-ju-4_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-4_mapped_to_genome_single.bed.gz
47.57 kB
20170509-ju-4_mapped_to_genome_singleAndMulti.bed.gz
339.77 kB
20170509-ju-4_mapped_to_genome_reads_single.bed.gz
50.71 kB
20170509-ju-4_mapped_to_genome_single.bedgraph
160.73 kB
iCount xlsites
20170509-ju-8_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-8_mapped_to_genome_single.bed.gz
148.97 kB
20170509-ju-8_mapped_to_genome_singleAndMulti.bed.gz
774.19 kB
20170509-ju-8_mapped_to_genome_reads_single.bed.gz
162.35 kB
20170509-ju-8_mapped_to_genome_single.bedgraph
514.51 kB
Paraclu
20170509-ju-8_mapped_to_genome_single_peaks.bed.gz
5.42 kB
iCount xlsites
20170509-ju-1_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-1_mapped_to_genome_single.bed.gz
62.68 kB
20170509-ju-1_mapped_to_genome_singleAndMulti.bed.gz
362.70 kB
20170509-ju-1_mapped_to_genome_reads_single.bed.gz
66.78 kB
20170509-ju-1_mapped_to_genome_single.bedgraph
215.68 kB
iCount xlsites
20170509-ju-6_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-6_mapped_to_genome_single.bed.gz
72.40 kB
20170509-ju-6_mapped_to_genome_singleAndMulti.bed.gz
501.15 kB
20170509-ju-6_mapped_to_genome_reads_single.bed.gz
78.14 kB
20170509-ju-6_mapped_to_genome_single.bedgraph
250.25 kB
iCount summary
20170509-ju-30_mapped_to_genome_single_summary_type.tsv
579 B
20170509-ju-30_mapped_to_genome_single_summary_subtype.tsv
831 B
20170509-ju-30_mapped_to_genome_single_summary_gene.tsv
94.60 kB
Paraclu
20170509-ju-30_mapped_to_genome_single_peaks.bed.gz
169 B
iCount summary
20170509-ju-28_mapped_to_genome_single_summary_type.tsv
547 B
20170509-ju-28_mapped_to_genome_single_summary_subtype.tsv
632 B
20170509-ju-28_mapped_to_genome_single_summary_gene.tsv
27.53 kB
Paraclu
20170509-ju-28_mapped_to_genome_single_peaks.bed.gz
119 B
iCount summary
20170509-ju-27_mapped_to_genome_single_summary_type.tsv
563 B
20170509-ju-27_mapped_to_genome_single_summary_subtype.tsv
686 B
20170509-ju-27_mapped_to_genome_single_summary_gene.tsv
17.81 kB
iCount RNA-maps
20170509-ju-28_mapped_to_genome_single.tar.gz
259.37 kB
Paraclu
20170509-ju-27_mapped_to_genome_single_peaks.bed.gz
126 B
PEKA
4mer analysis of 20170509-ju-27_mapped_to_genome.tar.gz
151 B
iCount summary
20170509-ju-26_mapped_to_genome_single_summary_type.tsv
581 B
20170509-ju-26_mapped_to_genome_single_summary_subtype.tsv
897 B
20170509-ju-26_mapped_to_genome_single_summary_gene.tsv
77.68 kB
iCount RNA-maps
20170509-ju-26_mapped_to_genome_single.tar.gz
285.31 kB
iCount RNA-maps
20170509-ju-27_mapped_to_genome_single.tar.gz
210.78 kB
Paraclu
20170509-ju-26_mapped_to_genome_single_peaks.bed.gz
286 B
iCount summary
20170509-ju-29_mapped_to_genome_single_summary_type.tsv
591 B
20170509-ju-29_mapped_to_genome_single_summary_subtype.tsv
976 B
20170509-ju-29_mapped_to_genome_single_summary_gene.tsv
344.03 kB
PEKA
4mer analysis of 20170509-ju-26_mapped_to_genome.tar.gz
151 B
Paraclu
20170509-ju-29_mapped_to_genome_single_peaks.bed.gz
2.50 kB
iCount summary
20170509-ju-24_mapped_to_genome_single_summary_type.tsv
564 B
20170509-ju-24_mapped_to_genome_single_summary_subtype.tsv
816 B
20170509-ju-24_mapped_to_genome_single_summary_gene.tsv
24.75 kB
iCount RNA-maps
20170509-ju-29_mapped_to_genome_single.tar.gz
349.52 kB
iCount summary
20170509-ju-23_mapped_to_genome_single_summary_type.tsv
563 B
20170509-ju-23_mapped_to_genome_single_summary_subtype.tsv
690 B
20170509-ju-23_mapped_to_genome_single_summary_gene.tsv
30.85 kB
iCount RNA-maps
20170509-ju-24_mapped_to_genome_single.tar.gz
218.62 kB
iCount RNA-maps
20170509-ju-23_mapped_to_genome_single.tar.gz
221.78 kB
iCount summary
20170509-ju-21_mapped_to_genome_single_summary_type.tsv
570 B
20170509-ju-21_mapped_to_genome_single_summary_subtype.tsv
806 B
20170509-ju-21_mapped_to_genome_single_summary_gene.tsv
66.92 kB
Paraclu
20170509-ju-21_mapped_to_genome_single_peaks.bed.gz
99 B
iCount summary
20170509-ju-25_mapped_to_genome_single_summary_type.tsv
571 B
20170509-ju-25_mapped_to_genome_single_summary_subtype.tsv
634 B
20170509-ju-25_mapped_to_genome_single_summary_gene.tsv
31.59 kB
Paraclu
20170509-ju-25_mapped_to_genome_single_peaks.bed.gz
138 B
iCount summary
20170509-ju-22_mapped_to_genome_single_summary_type.tsv
597 B
20170509-ju-22_mapped_to_genome_single_summary_subtype.tsv
925 B
20170509-ju-22_mapped_to_genome_single_summary_gene.tsv
220.75 kB
iCount RNA-maps
20170509-ju-22_mapped_to_genome_single.tar.gz
337.70 kB
iCount summary
20170509-ju-18_mapped_to_genome_single_summary_type.tsv
557 B
20170509-ju-18_mapped_to_genome_single_summary_subtype.tsv
750 B
20170509-ju-18_mapped_to_genome_single_summary_gene.tsv
25.70 kB
Paraclu
20170509-ju-18_mapped_to_genome_single_peaks.bed.gz
119 B
iCount summary
20170509-ju-17_mapped_to_genome_single_summary_type.tsv
573 B
20170509-ju-17_mapped_to_genome_single_summary_subtype.tsv
760 B
20170509-ju-17_mapped_to_genome_single_summary_gene.tsv
51.94 kB
Paraclu
20170509-ju-17_mapped_to_genome_single_peaks.bed.gz
101 B
PEKA
4mer analysis of 20170509-ju-17_mapped_to_genome.tar.gz
151 B
iCount summary
20170509-ju-20_mapped_to_genome_single_summary_type.tsv
603 B
20170509-ju-20_mapped_to_genome_single_summary_subtype.tsv
988 B
20170509-ju-20_mapped_to_genome_single_summary_gene.tsv
778.89 kB
iCount xlsites
20170509-ju-3_mapped_to_genome_skipped.bam
8.65 kB
20170509-ju-3_mapped_to_genome_single.bed.gz
123.26 kB
20170509-ju-3_mapped_to_genome_singleAndMulti.bed.gz
716.87 kB
20170509-ju-3_mapped_to_genome_reads_single.bed.gz
131.95 kB
20170509-ju-3_mapped_to_genome_single.bedgraph
429.69 kB
iCount summary
20170509-ju-15_mapped_to_genome_single_summary_type.tsv
560 B
20170509-ju-15_mapped_to_genome_single_summary_subtype.tsv
563 B
20170509-ju-15_mapped_to_genome_single_summary_gene.tsv
18.40 kB
Paraclu
20170509-ju-15_mapped_to_genome_single_peaks.bed.gz
100 B
iCount summary
20170509-ju-14_mapped_to_genome_single_summary_type.tsv
569 B
20170509-ju-14_mapped_to_genome_single_summary_subtype.tsv
635 B
20170509-ju-14_mapped_to_genome_single_summary_gene.tsv
22.53 kB
iCount RNA-maps
20170509-ju-15_mapped_to_genome_single.tar.gz
158.07 kB
Paraclu
20170509-ju-14_mapped_to_genome_single_peaks.bed.gz
100 B
iCount summary
20170509-ju-16_mapped_to_genome_single_summary_type.tsv
622 B
20170509-ju-16_mapped_to_genome_single_summary_subtype.tsv
1022 B
20170509-ju-16_mapped_to_genome_single_summary_gene.tsv
2.13 MB
iCount RNA-maps
20170509-ju-14_mapped_to_genome_single.tar.gz
262.69 kB
Paraclu
20170509-ju-16_mapped_to_genome_single_peaks.bed.gz
31.56 kB
iCount summary
20170509-ju-13_mapped_to_genome_single_summary_type.tsv
563 B
20170509-ju-13_mapped_to_genome_single_summary_subtype.tsv
890 B
20170509-ju-13_mapped_to_genome_single_summary_gene.tsv
36.15 kB
iCount RNA-maps
20170509-ju-16_mapped_to_genome_single.tar.gz
901.78 kB
iCount RNA-maps
20170509-ju-13_mapped_to_genome_single.tar.gz
250.53 kB
iCount summary
20170509-ju-12_mapped_to_genome_single_summary_type.tsv
584 B
20170509-ju-12_mapped_to_genome_single_summary_subtype.tsv
839 B
20170509-ju-12_mapped_to_genome_single_summary_gene.tsv
66.76 kB
iCount summary
20170509-ju-11_mapped_to_genome_single_summary_type.tsv
561 B
20170509-ju-11_mapped_to_genome_single_summary_subtype.tsv
690 B
20170509-ju-11_mapped_to_genome_single_summary_gene.tsv
21.42 kB
iCount RNA-maps
20170509-ju-12_mapped_to_genome_single.tar.gz
268.32 kB
iCount summary
20170509-ju-19_mapped_to_genome_single_summary_type.tsv
608 B
20170509-ju-19_mapped_to_genome_single_summary_subtype.tsv
938 B
20170509-ju-19_mapped_to_genome_single_summary_gene.tsv
1.43 MB
iCount RNA-maps
20170509-ju-11_mapped_to_genome_single.tar.gz
214.19 kB
Paraclu
20170509-ju-19_mapped_to_genome_single_peaks.bed.gz
5.67 kB
iCount summary
20170509-ju-10_mapped_to_genome_single_summary_type.tsv
578 B
20170509-ju-10_mapped_to_genome_single_summary_subtype.tsv
835 B
20170509-ju-10_mapped_to_genome_single_summary_gene.tsv
38.90 kB
iCount RNA-maps
20170509-ju-10_mapped_to_genome_single.tar.gz
256.66 kB
iCount summary
20170509-ju-9_mapped_to_genome_single_summary_type.tsv
592 B
20170509-ju-9_mapped_to_genome_single_summary_subtype.tsv
974 B
20170509-ju-9_mapped_to_genome_single_summary_gene.tsv
196.05 kB
Paraclu
20170509-ju-9_mapped_to_genome_single_peaks.bed.gz
999 B
iCount summary
20170509-ju-7_mapped_to_genome_single_summary_type.tsv
597 B
20170509-ju-7_mapped_to_genome_single_summary_subtype.tsv
983 B
20170509-ju-7_mapped_to_genome_single_summary_gene.tsv
238.62 kB
iCount RNA-maps
20170509-ju-7_mapped_to_genome_single.tar.gz
348.98 kB
iCount RNA-maps
20170509-ju-9_mapped_to_genome_single.tar.gz
309.76 kB
iCount summary
20170509-ju-5_mapped_to_genome_single_summary_type.tsv
588 B
20170509-ju-5_mapped_to_genome_single_summary_subtype.tsv
904 B
20170509-ju-5_mapped_to_genome_single_summary_gene.tsv
91.79 kB
iCount RNA-maps
20170509-ju-5_mapped_to_genome_single.tar.gz
282.57 kB
PEKA
4mer analysis of 20170509-ju-5_mapped_to_genome.tar.gz
151 B
iCount summary
20170814-ju-17_mapped_to_genome_single_summary_type.tsv
625 B
20170814-ju-17_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
20170814-ju-17_mapped_to_genome_single_summary_gene.tsv
2.51 MB
Paraclu
20170814-ju-17_mapped_to_genome_single_peaks.bed.gz
18.73 kB
PEKA
4mer analysis of 20170814-ju-17_mapped_to_genome.tar.gz
547.70 kB
iCount summary
20170509-ju-4_mapped_to_genome_single_summary_type.tsv
594 B
20170509-ju-4_mapped_to_genome_single_summary_subtype.tsv
921 B
20170509-ju-4_mapped_to_genome_single_summary_gene.tsv
275.34 kB
iCount RNA-maps
20170814-ju-17_mapped_to_genome_single.tar.gz
972.02 kB
iCount RNA-maps
20170509-ju-4_mapped_to_genome_single.tar.gz
333.00 kB
iCount xlsites
20170509-ju-2_mapped_to_genome_skipped.bam
3.05 kB
20170509-ju-2_mapped_to_genome_single.bed.gz
317.61 kB
20170509-ju-2_mapped_to_genome_singleAndMulti.bed.gz
1.80 MB
20170509-ju-2_mapped_to_genome_reads_single.bed.gz
342.19 kB
20170509-ju-2_mapped_to_genome_single.bedgraph
1.12 MB
iCount summary
20170509-ju-8_mapped_to_genome_single_summary_type.tsv
601 B
20170509-ju-8_mapped_to_genome_single_summary_subtype.tsv
998 B
20170509-ju-8_mapped_to_genome_single_summary_gene.tsv
746.48 kB
iCount summary
20170509-ju-1_mapped_to_genome_single_summary_type.tsv
602 B
20170509-ju-1_mapped_to_genome_single_summary_subtype.tsv
929 B
20170509-ju-1_mapped_to_genome_single_summary_gene.tsv
347.27 kB
Paraclu
20170509-ju-1_mapped_to_genome_single_peaks.bed.gz
1.98 kB
iCount summary
20170509-ju-6_mapped_to_genome_single_summary_type.tsv
600 B
20170509-ju-6_mapped_to_genome_single_summary_subtype.tsv
989 B
20170509-ju-6_mapped_to_genome_single_summary_gene.tsv
435.97 kB
iCount RNA-maps
20170509-ju-8_mapped_to_genome_single.tar.gz
417.63 kB
Paraclu
20170509-ju-6_mapped_to_genome_single_peaks.bed.gz
3.23 kB
PEKA
4mer analysis of 20170509-ju-30_mapped_to_genome.tar.gz
150 B
iCount RNA-maps
20170509-ju-1_mapped_to_genome_single.tar.gz
362.99 kB
iCount RNA-maps
20170509-ju-6_mapped_to_genome_single.tar.gz
394.38 kB
PEKA
4mer analysis of 20170509-ju-18_mapped_to_genome.tar.gz
151 B
iCount summary
20170509-ju-3_mapped_to_genome_single_summary_type.tsv
604 B
20170509-ju-3_mapped_to_genome_single_summary_subtype.tsv
870 B
20170509-ju-3_mapped_to_genome_single_summary_gene.tsv
644.66 kB
Paraclu
20170509-ju-3_mapped_to_genome_single_peaks.bed.gz
5.40 kB
PEKA
4mer analysis of 20170509-ju-15_mapped_to_genome.tar.gz
150 B
PEKA
4mer analysis of 20170509-ju-16_mapped_to_genome.tar.gz
546.98 kB
PEKA
4mer analysis of 20170509-ju-14_mapped_to_genome.tar.gz
151 B
PEKA
4mer analysis of 20170509-ju-3_mapped_to_genome.tar.gz
334.78 kB
iCount summary
20170509-ju-2_mapped_to_genome_single_summary_type.tsv
609 B
20170509-ju-2_mapped_to_genome_single_summary_subtype.tsv
1007 B
20170509-ju-2_mapped_to_genome_single_summary_gene.tsv
1.16 MB
iCount RNA-maps
20170509-ju-2_mapped_to_genome_single.tar.gz
470.39 kB
Paraclu
20170509-ju-2_mapped_to_genome_single_peaks.bed.gz
13.56 kB
PEKA
4mer analysis of 20170509-ju-2_mapped_to_genome.tar.gz
380.55 kB
Upload iCount sample annotation
sample_sheet_20170510_JU_all_samples.xlsx
11.15 kB
sample_sheet_20170510_JU_all_samples.tab.gz
817 B
FASTQ file (single-end)
PR100_iCLIP_20170510_JU_JU_all_samples.fastq.gz
2.58 GB
PR100_iCLIP_20170510_JU_JU_all_samples_fastqc.zip
588.06 kB
Upload iCount sample annotation
sample_sheet_20171130_RB_all_samples.xlsx
9.76 kB
sample_sheet_20171130_RB_all_samples.tab.gz
659 B
Upload iCount sample annotation
sample_sheet_20171130_RB_all_samples.xlsx
9.76 kB
sample_sheet_20171130_RB_all_samples.tab.gz
659 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
730 B
FASTQ file (CLIP)
20170510-ju-3.fastq.gz
35.95 MB
20170510-ju-3_fastqc.zip
779.68 kB
iCount group
PR100_Flag_NXL_PK_digest_grouped_cdna.bed.gz
392.69 kB
PR100_Flag_NXL_PK_digest_grouped_reads.bed.gz
440.67 kB
PR100_Flag_NXL_PK_digest_grouped_cdna.bedgraph
1.54 MB
Paraclu
PR100_Flag_NXL_PK_digest_grouped_cdna_peaks.bed.gz
1.88 kB
iCount RNA-maps
PR100_Flag_NXL_PK_digest_grouped_cdna.tar.gz
572.16 kB
iCount summary
PR100_Flag_NXL_PK_digest_grouped_cdna_summary_type.tsv
427 B
PR100_Flag_NXL_PK_digest_grouped_cdna_summary_subtype.tsv
994 B
PR100_Flag_NXL_PK_digest_grouped_cdna_summary_gene.tsv
1.40 MB
iCount annotate
PR100_Flag_NXL_PK_digest_grouped_cdna_annotated.bed.gz
605.85 kB
PR100_Flag_NXL_PK_digest_grouped_cdna_annotated.bedgraph
1.54 MB
iCount annotate
Flag_XL_PK_digest_grouped_cdna_annotated.bed.gz
280.23 kB
Flag_XL_PK_digest_grouped_cdna_annotated.bedgraph
696.44 kB
Paraclu
Flag_XL_PK_digest_grouped_cdna_peaks.bed.gz
2.95 kB
iCount RNA-maps
Flag_XL_PK_digest_grouped_cdna.tar.gz
433.34 kB
PEKA
5mer analysis of Flag_XL_PK_digest_grouped_cdna.tar.gz
458.44 kB
iCount group
Flag_XL_PK_digest_grouped_cdna.bed.gz
191.57 kB
Flag_XL_PK_digest_grouped_reads.bed.gz
207.69 kB
Flag_XL_PK_digest_grouped_cdna.bedgraph
696.44 kB
iCount summary
Flag_XL_PK_digest_grouped_cdna_summary_type.tsv
423 B
Flag_XL_PK_digest_grouped_cdna_summary_subtype.tsv
989 B
Flag_XL_PK_digest_grouped_cdna_summary_gene.tsv
1004.77 kB
iCount summary
GA100_Flag_XL_PK_digest_grouped_cdna_summary_type.tsv
427 B
GA100_Flag_XL_PK_digest_grouped_cdna_summary_subtype.tsv
991 B
GA100_Flag_XL_PK_digest_grouped_cdna_summary_gene.tsv
1.44 MB
Paraclu
GA100_Flag_XL_PK_digest_grouped_cdna_peaks.bed.gz
3.62 kB
PEKA
5mer analysis of GA100_Flag_XL_PK_digest_grouped_cdna.tar.gz
497.54 kB
iCount annotate
GA100_Flag_NXL_PK_digest_grouped_cdna_annotated.bed.gz
211.18 kB
GA100_Flag_NXL_PK_digest_grouped_cdna_annotated.bedgraph
527.21 kB
iCount RNA-maps
GA100_Flag_NXL_PK_digest_grouped_cdna.tar.gz
404.45 kB
PEKA
5mer analysis of GA100_Flag_NXL_PK_digest_grouped_cdna.tar.gz
280.92 kB
iCount group
GA100_Flag_XL_PK_digest_grouped_cdna.bed.gz
462.34 kB
GA100_Flag_XL_PK_digest_grouped_reads.bed.gz
513.69 kB
GA100_Flag_XL_PK_digest_grouped_cdna.bedgraph
1.77 MB
iCount group
GA100_Flag_NXL_PK_digest_grouped_cdna.bed.gz
145.10 kB
GA100_Flag_NXL_PK_digest_grouped_reads.bed.gz
157.40 kB
GA100_Flag_NXL_PK_digest_grouped_cdna.bedgraph
527.21 kB
iCount annotate
GA100_Flag_XL_PK_digest_grouped_cdna_annotated.bed.gz
668.02 kB
GA100_Flag_XL_PK_digest_grouped_cdna_annotated.bedgraph
1.77 MB
PEKA
5mer analysis of PR100_Flag_NXL_PK_digest_grouped_cdna.tar.gz
587.10 kB
iCount RNA-maps
GA100_Flag_XL_PK_digest_grouped_cdna.tar.gz
484.27 kB
iCount summary
GA100_Flag_NXL_PK_digest_grouped_cdna_summary_type.tsv
422 B
GA100_Flag_NXL_PK_digest_grouped_cdna_summary_subtype.tsv
979 B
GA100_Flag_NXL_PK_digest_grouped_cdna_summary_gene.tsv
833.90 kB
Paraclu
GA100_Flag_NXL_PK_digest_grouped_cdna_peaks.bed.gz
2.39 kB
PEKA
5mer analysis of 20170509-ju-20_mapped_to_genome.tar.gz
470.33 kB
PR100_iCLIP_all_samples
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