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Folder iconiiclip benchmarking

Flora Lee
Aug. 16, 2021
processed PTBP1 and input CLIP data for the purpose of iiCLIP benchmarking: Lee et al. - 'An improved iCLIP protocol'

Copy of PTBP1_HEK293_1MIO_1_20201219_FL

STAR
ptbp1-hek293-1mio-1-20201219-fl_trimmed_unmapped.out.mate1.fastq.gz
379.88 MB
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bam
469.76 MB
ptbp1-hek293-1mio-1-20201219-fl_trimmed_stats.txt
1.78 kB
ptbp1-hek293-1mio-1-20201219-fl_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bw
105.84 kB
iCount summary
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_type.tsv
667 B
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_gene.tsv
2.38 MB
Cutadapt (single-end)
report.txt
667 B
ptbp1-hek293-1mio-1-20201219-fl_trimmed.fastq.gz
382.88 MB
fastqc
Directory
iCount xlsites
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_skipped.bam
4.09 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bed.gz
49.46 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.81 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_reads_single.bed.gz
52.41 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bedgraph
210 B
iCLIP reads proxy
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.fastq.gz
379.88 MB
fastqc
Directory
STAR
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
141.35 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.bam.bai
3.59 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.bam
604.96 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_SJ.out.tab
919.65 kB
iCount xlsites
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_skipped.bam
4.62 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bed.gz
6.99 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_singleAndMulti.bed.gz
18.16 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_reads_single.bed.gz
7.82 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bedgraph
32.27 MB
iCount RNA-maps
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.tar.gz
687.25 kB
Paraclu
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_peaks.bed.gz
160.28 kB
PEKA
4mer analysis of ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.tar.gz
566.29 kB
FASTQ file (CLIP)
ptbp1-hek293-1mio-1-20201219-fl.fastq.gz
379.91 MB
fastqc
Directory
ptbp1-hek293-1mio-1-20201219-fl_fastqc.zip
479.50 kB

Copy of K562 PTBP1 ENCFF689XJE_imaps.fastq.gz

FASTQ file (single-end)
fastqc
Directory
ENCFF689XJE_imaps_fastqc.zip
346.68 kB
stderr.txt
1015 B
ENCFF689XJE_imaps.fastq.gz
179.73 MB
PEKA
4mer analysis of ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
618.05 kB
iCount RNA-maps
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
1.85 MB
Paraclu
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
138.67 kB
iCount summary
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
1.86 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
477 B
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount xlsites
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
11.78 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
55.59 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
20.45 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
4.99 kB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_reads_single.bed.gz
11.80 MB
STAR
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_SJ.out.tab
1.53 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.37 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_unmapped.out.mate1.fastq.gz
23.75 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.bam
236.38 MB
iCount xlsites
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_singleAndMulti.bed.gz
97.22 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bed.gz
77.94 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_reads_single.bed.gz
77.96 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_skipped.bam
4.01 kB
iCLIP reads proxy
fastqc
Directory
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.fastq.gz
125.82 MB
STAR
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_SJ.out.tab
0 B
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_unmapped.out.mate1.fastq.gz
125.82 MB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_stats.txt
1.78 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bam.bai
20.56 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bw
105.33 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bam
185.94 MB
Cutadapt (single-end)
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.fastq.gz
167.35 MB
fastqc
Directory
report.txt
669 B
Cutadapt (single-end)
fastqc
Directory
ENCFF689XJE_imaps_trimmed_trimmed.fastq.gz
175.89 MB
report.txt
10.97 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
18.76 kB
ENCFF689XJE_imaps_trimmed.fastq.gz
175.93 MB

No Sample

FASTQ file (single-end)
stderr.txt
1.60 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju.fastq.gz
162.20 MB
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_fastqc.zip
409.42 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.fastq.gz
644.15 MB
report.txt
668 B
STAR
ptbp1-hek293-1mio-1-20201219-fl_trimmed_unmapped.out.mate1.fastq.gz
379.88 MB
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bam
469.76 MB
ptbp1-hek293-1mio-1-20201219-fl_trimmed_stats.txt
1.78 kB
ptbp1-hek293-1mio-1-20201219-fl_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-1-20201219-fl_trimmed.bw
105.84 kB
iCount summary
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_type.tsv
667 B
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_gene.tsv
2.38 MB
FASTQ file (CLIP)
input-sp3-hek293-1mio-1-20201219-fl.fastq.gz
806.61 MB
fastqc
Directory
input-sp3-hek293-1mio-1-20201219-fl_fastqc.zip
450.42 kB
iCount RNA-maps
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
2.58 MB
FASTQ file (single-end)
fastqc
Directory
ENCFF689XJE_imaps_fastqc.zip
346.68 kB
stderr.txt
1015 B
ENCFF689XJE_imaps.fastq.gz
179.73 MB
PEKA
4mer analysis of ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
618.05 kB
Paraclu
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
251.97 kB
STAR
ENCFF960RXN_imaps_trimmed_trimmed_trimmed.bam.bai
20.56 kB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed.bam
682.52 MB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_unmapped.out.mate1.fastq.gz
287.45 MB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_SJ.out.tab
0 B
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_stats.txt
1.79 kB
STAR
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_SJ.out.tab
2.29 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.70 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_unmapped.out.mate1.fastq.gz
59.10 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.bam
480.57 MB
PEKA
4mer analysis of ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
694.58 kB
FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-1_fastqc.zip
315.27 kB
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1.fastq.gz
631.66 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_unmapped.out.mate1.fastq.gz
340.17 MB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bw
105.65 kB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bam
379.07 MB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_stats.txt
1.78 kB
STAR
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
51.45 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.bam.bai
3.35 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_SJ.out.tab
627.08 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.bam
543.31 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bw
106.02 kB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_unmapped.out.mate1.fastq.gz
1.04 GB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bam
1.15 GB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bam.bai
20.56 kB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.tar.gz
1.94 MB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.tar.gz
2.45 MB
iCount RNA-maps
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
1.85 MB
Paraclu
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
138.67 kB
iCount summary
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
1.86 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
477 B
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount xlsites
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
11.78 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
55.59 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
20.45 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
4.99 kB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_reads_single.bed.gz
11.80 MB
STAR
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_SJ.out.tab
1.53 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.37 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_unmapped.out.mate1.fastq.gz
23.75 MB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.bam
236.38 MB
iCount xlsites
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_singleAndMulti.bed.gz
97.22 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bed.gz
77.94 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_reads_single.bed.gz
77.96 kB
ENCFF689XJE_imaps_trimmed_trimmed_premapped_to_ncRNAs_skipped.bam
4.01 kB
iCLIP reads proxy
fastqc
Directory
ENCFF689XJE_imaps_trimmed_trimmed_mapped_to_genome.fastq.gz
125.82 MB
STAR
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_SJ.out.tab
0 B
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_unmapped.out.mate1.fastq.gz
125.82 MB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed_stats.txt
1.78 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bam.bai
20.56 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bw
105.33 kB
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.bam
185.94 MB
Cutadapt (single-end)
ENCFF689XJE_imaps_trimmed_trimmed_trimmed.fastq.gz
167.35 MB
fastqc
Directory
report.txt
669 B
Cutadapt (single-end)
fastqc
Directory
ENCFF689XJE_imaps_trimmed_trimmed.fastq.gz
175.89 MB
report.txt
10.97 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
18.76 kB
ENCFF689XJE_imaps_trimmed.fastq.gz
175.93 MB
PEKA
4mer analysis of ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
670.88 kB
iCount RNA-maps
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
2.38 MB
iCount summary
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
2.09 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
479 B
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount xlsites
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
30.15 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
84.85 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
5.44 kB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_reads_single.bed.gz
17.90 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
17.85 MB
STAR
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_SJ.out.tab
2.22 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_unmapped.out.mate1.fastq.gz
38.58 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.53 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.bam
361.24 MB
iCount xlsites
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_reads_single.bed.gz
89.24 kB
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_singleAndMulti.bed.gz
121.07 kB
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_skipped.bam
4.01 kB
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bed.gz
89.07 kB
iCLIP reads proxy
fastqc
Directory
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.fastq.gz
196.65 MB
STAR
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed_SJ.out.tab
0 B
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed_stats.txt
1.78 kB
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed.bam
309.86 MB
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed.bam.bai
20.56 kB
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed_unmapped.out.mate1.fastq.gz
196.65 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
669 B
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed.fastq.gz
273.84 MB
Cutadapt (single-end)
report.txt
14.34 kB
fastqc
Directory
ENCFF273VIJ_imaps_trimmed_trimmed.fastq.gz
287.67 MB
Cutadapt (single-end)
report.txt
20.13 kB
fastqc
Directory
ENCFF273VIJ_imaps_trimmed.fastq.gz
288.74 MB
FASTQ file (single-end)
fastqc
Directory
ENCFF273VIJ_imaps.fastq.gz
305.80 MB
stderr.txt
1015 B
ENCFF273VIJ_imaps_fastqc.zip
346.85 kB
Paraclu
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
198.47 kB
iCount summary
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
479 B
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
2.03 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount xlsites
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_reads_single.bed.gz
27.02 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
42.04 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
26.98 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
128.15 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
3.67 kB
iCount xlsites
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_reads_single.bed.gz
102.03 kB
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_singleAndMulti.bed.gz
147.99 kB
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bed.gz
101.93 kB
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_skipped.bam
4.01 kB
iCLIP reads proxy
fastqc
Directory
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.fastq.gz
287.45 MB
Cutadapt (single-end)
report.txt
669 B
fastqc
Directory
ENCFF960RXN_imaps_trimmed_trimmed_trimmed.fastq.gz
655.04 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
13.05 kB
ENCFF960RXN_imaps_trimmed_trimmed.fastq.gz
683.40 MB
Cutadapt (single-end)
ENCFF960RXN_imaps_trimmed.fastq.gz
683.75 MB
fastqc
Directory
report.txt
20.29 kB
FASTQ file (single-end)
stderr.txt
1015 B
fastqc
Directory
ENCFF960RXN_imaps.fastq.gz
691.37 MB
ENCFF960RXN_imaps_fastqc.zip
385.71 kB
Cutadapt (single-end)
report.txt
667 B
ptbp1-hek293-1mio-1-20201219-fl_trimmed.fastq.gz
382.88 MB
fastqc
Directory
iCount xlsites
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_skipped.bam
4.09 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bed.gz
49.46 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.81 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_reads_single.bed.gz
52.41 kB
ptbp1-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bedgraph
210 B
iCLIP reads proxy
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.fastq.gz
379.88 MB
fastqc
Directory
STAR
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
141.35 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.bam.bai
3.59 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.bam
604.96 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_SJ.out.tab
919.65 kB
iCount xlsites
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_skipped.bam
4.62 kB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bed.gz
6.99 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_singleAndMulti.bed.gz
18.16 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_reads_single.bed.gz
7.82 MB
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bedgraph
32.27 MB
iCount RNA-maps
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single.tar.gz
687.25 kB
Paraclu
ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome_single_peaks.bed.gz
160.28 kB
PEKA
4mer analysis of ptbp1-hek293-1mio-1-20201219-fl_mapped_to_genome.tar.gz
566.29 kB
Cutadapt (single-end)
report.txt
671 B
input-sp3-hek293-1mio-1-20201219-fl_trimmed.fastq.gz
815.98 MB
fastqc
Directory
iCount xlsites
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_skipped.bam
4.09 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bed.gz
125.78 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
218.56 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_reads_single.bed.gz
126.95 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bedgraph
218 B
STAR
input-sp3-hek293-1mio-1-20201219-fl_trimmed_unmapped.out.mate1.fastq.gz
690.35 MB
input-sp3-hek293-1mio-1-20201219-fl_trimmed.bam.bai
20.56 kB
input-sp3-hek293-1mio-1-20201219-fl_trimmed.bam
978.04 MB
input-sp3-hek293-1mio-1-20201219-fl_trimmed_stats.txt
1.79 kB
input-sp3-hek293-1mio-1-20201219-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.fastq.gz
690.35 MB
fastqc
Directory
STAR
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
200.27 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.bam.bai
2.74 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.bam
1.30 GB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_stats.txt
1.82 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_SJ.out.tab
4.88 MB
iCount xlsites
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_skipped.bam
11.07 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bed.gz
48.86 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_singleAndMulti.bed.gz
85.81 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_reads_single.bed.gz
50.59 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bedgraph
231.26 MB
iCount summary
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_type.tsv
679 B
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_gene.tsv
3.65 MB
Paraclu
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_peaks.bed.gz
462.00 kB
iCount RNA-maps
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.tar.gz
3.11 MB
PEKA
4mer analysis of input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.tar.gz
743.65 kB
FASTQ file (CLIP)
ptbp1-hek293-1mio-1-20201219-fl.fastq.gz
379.91 MB
fastqc
Directory
ptbp1-hek293-1mio-1-20201219-fl_fastqc.zip
479.50 kB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
8.17 MB
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
21.73 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
2.65 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
7.45 MB
iCount RNA-maps
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
713.37 kB
STAR
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bam
712.09 MB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_unmapped.out.mate1.fastq.gz
643.95 MB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bw
105.86 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
74.19 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_reads_single.bed.gz
55.49 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_single.bedgraph
212 B
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_single.bed.gz
54.80 kB
iCLIP reads proxy
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.fastq.gz
643.95 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
88.72 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_SJ.out.tab
1.10 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.bam.bai
3.15 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.bam
1014.88 MB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_singleAndMulti.bed.gz
66.48 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.bed.gz
46.99 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_skipped.bam
5.99 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.bedgraph
227.98 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_reads_single.bed.gz
48.43 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_gene.tsv
2.03 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_type.tsv
476 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_peaks.bed.gz
1.11 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.tar.gz
742.09 kB
FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-2_fastqc.zip
321.13 kB
ptbp1-hela-wt-20130311-lujh27a-2.fastq.gz
1.02 GB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.fastq.gz
1.04 GB
report.txt
668 B
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
91.04 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_reads_single.bed.gz
65.83 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_single.bed.gz
65.02 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_single.bedgraph
212 B
iCLIP reads proxy
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.fastq.gz
1.04 GB
fastqc
Directory
STAR
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.bam.bai
3.12 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_SJ.out.tab
1.75 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.bam
1.61 GB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
155.80 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_skipped.bam
7.86 kB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.bed.gz
70.79 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.bedgraph
343.90 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_reads_single.bed.gz
72.97 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_singleAndMulti.bed.gz
100.26 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_gene.tsv
2.24 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_type.tsv
481 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_peaks.bed.gz
1.79 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.tar.gz
694.50 kB
FASTQ file (CLIP)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-3_fastqc.zip
317.98 kB
ptbp1-hela-wt-20130311-lujh27a-3.fastq.gz
334.64 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.fastq.gz
340.24 MB
report.txt
668 B
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_reads_single.bed.gz
46.14 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_single.bed.gz
45.50 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
60.79 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_single.bedgraph
212 B
iCLIP reads proxy
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.fastq.gz
340.17 MB
fastqc
Directory
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.bed.gz
25.62 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_singleAndMulti.bed.gz
37.02 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_skipped.bam
5.16 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_reads_single.bed.gz
26.61 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.bedgraph
123.93 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_type.tsv
470 B
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_gene.tsv
1.82 MB
Paraclu
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_peaks.bed.gz
576.18 kB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.tar.gz
1.43 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.tar.gz
732.58 kB
FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-4_fastqc.zip
319.51 kB
ptbp1-hela-wt-20130311-lujh27a-4.fastq.gz
598.70 MB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.fastq.gz
610.29 MB
report.txt
668 B
STAR
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bam
678.65 MB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_unmapped.out.mate1.fastq.gz
607.36 MB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bw
105.94 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_single.bed.gz
57.38 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_single.bedgraph
212 B
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_reads_single.bed.gz
57.99 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_singleAndMulti.bed.gz
76.75 kB
iCLIP reads proxy
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.fastq.gz
607.36 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_SJ.out.tab
1.14 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.bam
971.38 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.bam.bai
3.00 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_unmapped.out.mate1.fastq.gz
90.13 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_skipped.bam
5.64 kB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.bed.gz
45.17 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_reads_single.bed.gz
46.49 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.bedgraph
218.94 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_singleAndMulti.bed.gz
64.60 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_gene.tsv
2.05 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_type.tsv
474 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_peaks.bed.gz
1.07 MB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.tar.gz
1.98 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.tar.gz
798.63 kB
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
592.75 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
5.54 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
1.81 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.fastq.gz
163.65 MB
report.txt
718 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_fastqc.zip
405.13 kB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.tar.gz
5.05 MB
iCount summary
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_type.tsv
439 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_subtype.tsv
1021 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_gene.tsv
1.63 MB
Paraclu
peaks.bed.gz
112.02 kB
iCount RNA-maps
results.tar.gz
712.20 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam.bai
3.89 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_unmapped.out.mate1.fastq.gz
53.70 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam
326.00 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_SJ.out.tab
536.96 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bw
79.72 kB
K-mers
kmer_frequency_ncRNA.tsv
5.84 kB
kmer_frequency_utr3.tsv
5.64 kB
other_exon region.png
247.13 kB
kmer_frequency_intron.tsv
5.86 kB
positional_distribution_genome.tsv
557.44 kB
positional_distribution_intron.tsv
552.95 kB
positional_distribution_ncRNA.tsv
437.44 kB
intron region.png
183.76 kB
ncRNA region.png
220.28 kB
positional_distribution_utr3.tsv
372.10 kB
utr3 region.png
221.64 kB
positional_distribution_other_exon.tsv
243.36 kB
kmer_frequency_genome.tsv
5.87 kB
kmer_frequency_other_exon.tsv
5.52 kB
genome region.png
177.67 kB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_skipped.bam
4.21 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_singleAndMulti.bed.gz
15.59 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bed.gz
7.07 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bedgraph
31.27 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_reads_single.bed.gz
7.37 MB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_singleAndMulti.bed.gz
81.92 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bed.gz
42.15 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_reads_single.bed.gz
42.61 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bedgraph
250 B
iCount reads proxy
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.fastq.gz
163.95 MB
stderr.txt
1.97 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_fastqc.zip
407.07 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bw
74.36 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
54.61 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bam
304.59 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bam.bai
3.99 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_SJ.out.tab
524.98 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.bed.gz
6.92 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_singleAndMulti.bed.gz
14.18 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_skipped.bam
4.35 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_reads_single.bed.gz
7.23 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.bedgraph
30.73 MB
iCount summary
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_gene.tsv
1.58 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_subtype.tsv
1.03 kB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.tar.gz
7.78 MB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
5.09 MB
Paraclu
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
161.33 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
718 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.fastq.gz
163.65 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_fastqc.zip
405.13 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_unmapped.out.mate1.fastq.gz
163.95 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam
238.43 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bw
105.62 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_stats.txt
1.78 kB
PEKA
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.tar.gz
941.21 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped
Directory
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
9.21 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
22.70 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
3.03 MB
iCount reads proxy
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.fastq.gz
310.30 MB
stderr.txt
1.64 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_fastqc.zip
438.43 kB
fastqc
Directory
Paraclu
peaks.bed.gz
121.17 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
4.70 MB
iCount summary
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_type.tsv
439 B
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_gene.tsv
1.76 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_subtype.tsv
1.01 kB
K-mers
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
3.55 MB
K-mers
other_exon region.png
260.14 kB
positional_distribution_intron.tsv
503.79 kB
kmer_frequency_intron.tsv
5.83 kB
intron region.png
182.28 kB
ncRNA region.png
228.47 kB
positional_distribution_utr3.tsv
261.01 kB
positional_distribution_ncRNA.tsv
432.35 kB
kmer_frequency_genome.tsv
5.83 kB
kmer_frequency_utr3.tsv
5.03 kB
genome region.png
191.61 kB
kmer_frequency_ncRNA.tsv
5.76 kB
positional_distribution_genome.tsv
533.79 kB
kmer_frequency_other_exon.tsv
3.61 kB
positional_distribution_other_exon.tsv
175.90 kB
utr3 region.png
249.73 kB
K-mers
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
3.47 MB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bed.gz
7.49 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_singleAndMulti.bed.gz
12.27 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bedgraph
34.35 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_reads_single.bed.gz
8.65 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_skipped.bam
4.96 kB
iCount RNA-maps
results.tar.gz
774.58 kB
FASTQ file (single-end)
stderr.txt
1.26 kB
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_fastqc.zip
469.35 kB
ptbp1-hek293-1mio-rep2-20190610-ju.fastq.gz
315.10 MB
STAR
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam.bai
3.96 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
55.17 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam
427.53 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_SJ.out.tab
414.20 kB
iCount summary
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_type.tsv
437 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_subtype.tsv
1023 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_gene.tsv
1.54 MB
Paraclu
peaks.bed.gz
58.04 kB
Cutadapt (single-end)
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_fastqc.zip
439.24 kB
report.txt
703 B
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.fastq.gz
309.34 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.tar.gz
776.47 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.fastq.gz
309.34 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_fastqc.zip
439.24 kB
report.txt
703 B
STAR
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam
444.17 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
310.30 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bw
105.75 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_stats.txt
1.78 kB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bed.gz
36.05 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_reads_single.bed.gz
37.80 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_singleAndMulti.bed.gz
74.26 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bedgraph
216 B
STAR
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
51.85 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.bam.bai
4.01 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.bam
414.02 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_SJ.out.tab
361.29 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_singleAndMulti.bed.gz
11.76 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_skipped.bam
5.04 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_reads_single.bed.gz
8.57 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.bed.gz
7.42 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.bedgraph
34.06 MB
iCount summary
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_subtype.tsv
1.03 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_gene.tsv
1.52 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
772.89 kB
Paraclu
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
95.09 kB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
135.80 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
5.82 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
395.01 kB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
819.88 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
23.62 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
2.02 MB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
4.72 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
1.50 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
24.78 MB
FASTQ file (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju.fastq.gz
238.64 MB
ptbp1-hek293-1mio-rep1-20190610-ju_fastqc.zip
478.78 kB
stderr.txt
1.26 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.tar.gz
4.46 MB
STAR
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
42.04 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam.bai
3.49 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_SJ.out.tab
588.94 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam
431.18 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_stats.txt
1.81 kB
K-mers
positional_distribution_intron.tsv
550.26 kB
kmer_frequency_intron.tsv
5.85 kB
ncRNA region.png
202.89 kB
intron region.png
186.06 kB
other_exon region.png
232.50 kB
kmer_frequency_ncRNA.tsv
5.81 kB
kmer_frequency_utr3.tsv
5.43 kB
positional_distribution_ncRNA.tsv
497.90 kB
kmer_frequency_genome.tsv
5.86 kB
positional_distribution_genome.tsv
558.15 kB
positional_distribution_utr3.tsv
368.27 kB
utr3 region.png
203.70 kB
kmer_frequency_other_exon.tsv
5.23 kB
genome region.png
181.18 kB
positional_distribution_other_exon.tsv
232.48 kB
Cutadapt (single-end)
report.txt
702 B
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.fastq.gz
234.20 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_fastqc.zip
463.26 kB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_singleAndMulti.bed.gz
23.34 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bed.gz
13.34 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_reads_single.bed.gz
14.58 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_skipped.bam
3.64 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bedgraph
61.88 MB
iCount RNA-maps
results.tar.gz
966.05 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.fastq.gz
234.20 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_fastqc.zip
463.26 kB
report.txt
702 B
STAR
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
234.42 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam
352.59 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_stats.txt
1.78 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bw
105.93 kB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_scores.tsv.gz
42.25 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_peaks.bed.gz
1.50 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_peaks.bedgraph
4.51 MB
K-mers
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.tar.gz
7.22 MB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bed.gz
44.61 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_singleAndMulti.bed.gz
82.05 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_reads_single.bed.gz
46.01 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bedgraph
216 B
iCount reads proxy
fastqc
Directory
stderr.txt
1.64 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_fastqc.zip
459.89 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.fastq.gz
234.42 MB
STAR
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.bam
409.50 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_stats.txt
1.81 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_SJ.out.tab
459.71 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.bam.bai
3.77 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
43.39 MB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_skipped.bam
3.68 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_reads_single.bed.gz
14.27 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.bed.gz
13.04 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_singleAndMulti.bed.gz
21.89 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.bedgraph
60.61 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
951.23 kB
iCount summary
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_gene.tsv
1.72 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_subtype.tsv
1.04 kB
Paraclu
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
191.11 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
4.44 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
221.85 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
676.49 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
9.83 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
1.47 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
41.62 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
4.40 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
9.81 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
43.97 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
2.82 MB

Copy of K562 PTBP1 ENCFF273VIJ_imaps.fastq.gz

Paraclu
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
251.97 kB
PEKA
4mer analysis of ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
670.88 kB
iCount RNA-maps
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
2.38 MB
iCount summary
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
2.09 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
479 B
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount xlsites
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
30.15 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
84.85 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
5.44 kB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_reads_single.bed.gz
17.90 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
17.85 MB
STAR
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
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38.58 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.53 MB
ENCFF273VIJ_imaps_trimmed_trimmed_mapped_to_genome.bam
361.24 MB
iCount xlsites
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89.24 kB
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_singleAndMulti.bed.gz
121.07 kB
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
ENCFF273VIJ_imaps_trimmed_trimmed_premapped_to_ncRNAs_skipped.bam
4.01 kB
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iCLIP reads proxy
fastqc
Directory
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196.65 MB
STAR
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed_SJ.out.tab
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ENCFF273VIJ_imaps_trimmed_trimmed_trimmed_stats.txt
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ENCFF273VIJ_imaps_trimmed_trimmed_trimmed.bam
309.86 MB
ENCFF273VIJ_imaps_trimmed_trimmed_trimmed.bam.bai
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Cutadapt (single-end)
fastqc
Directory
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273.84 MB
Cutadapt (single-end)
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fastqc
Directory
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287.67 MB
Cutadapt (single-end)
report.txt
20.13 kB
fastqc
Directory
ENCFF273VIJ_imaps_trimmed.fastq.gz
288.74 MB
FASTQ file (single-end)
fastqc
Directory
ENCFF273VIJ_imaps.fastq.gz
305.80 MB
stderr.txt
1015 B
ENCFF273VIJ_imaps_fastqc.zip
346.85 kB

Copy of K562 SMInput ENCFF960RXN_imaps.fastq.gz

iCount RNA-maps
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.tar.gz
2.58 MB
STAR
ENCFF960RXN_imaps_trimmed_trimmed_trimmed.bam.bai
20.56 kB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed.bam
682.52 MB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_unmapped.out.mate1.fastq.gz
287.45 MB
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_SJ.out.tab
0 B
ENCFF960RXN_imaps_trimmed_trimmed_trimmed_stats.txt
1.79 kB
STAR
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_SJ.out.tab
2.29 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_stats.txt
1.81 kB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.bam.bai
3.70 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_unmapped.out.mate1.fastq.gz
59.10 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.bam
480.57 MB
PEKA
4mer analysis of ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome.tar.gz
694.58 kB
Paraclu
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_peaks.bed.gz
198.47 kB
iCount summary
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_type.tsv
479 B
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_gene.tsv
2.03 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount xlsites
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27.02 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_singleAndMulti.bed.gz
42.04 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.bed.gz
26.98 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_single.bedgraph
128.15 MB
ENCFF960RXN_imaps_trimmed_trimmed_mapped_to_genome_skipped.bam
3.67 kB
iCount xlsites
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_reads_single.bed.gz
102.03 kB
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bedgraph
200 B
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147.99 kB
ENCFF960RXN_imaps_trimmed_trimmed_premapped_to_ncRNAs_single.bed.gz
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4.01 kB
iCLIP reads proxy
fastqc
Directory
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287.45 MB
Cutadapt (single-end)
report.txt
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fastqc
Directory
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Cutadapt (single-end)
fastqc
Directory
report.txt
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ENCFF960RXN_imaps_trimmed_trimmed.fastq.gz
683.40 MB
Cutadapt (single-end)
ENCFF960RXN_imaps_trimmed.fastq.gz
683.75 MB
fastqc
Directory
report.txt
20.29 kB
FASTQ file (single-end)
stderr.txt
1015 B
fastqc
Directory
ENCFF960RXN_imaps.fastq.gz
691.37 MB
ENCFF960RXN_imaps_fastqc.zip
385.71 kB

Copy of PTBP1_Hela_WT_20130311_LUJH27a_1

FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-1_fastqc.zip
315.27 kB
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1.fastq.gz
631.66 MB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.tar.gz
1.94 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.fastq.gz
644.15 MB
report.txt
668 B
STAR
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bam
712.09 MB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed_unmapped.out.mate1.fastq.gz
643.95 MB
ptbp1-hela-wt-20130311-lujh27a-1_trimmed.bw
105.86 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_singleAndMulti.bed.gz
74.19 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_reads_single.bed.gz
55.49 kB
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_single.bedgraph
212 B
ptbp1-hela-wt-20130311-lujh27a-1_premapped_to_ncRNAs_single.bed.gz
54.80 kB
iCLIP reads proxy
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.fastq.gz
643.95 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_unmapped.out.mate1.fastq.gz
88.72 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_SJ.out.tab
1.10 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.bam.bai
3.15 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.bam
1014.88 MB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_singleAndMulti.bed.gz
66.48 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.bed.gz
46.99 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_skipped.bam
5.99 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single.bedgraph
227.98 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_reads_single.bed.gz
48.43 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_gene.tsv
2.03 MB
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_summary_type.tsv
476 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome_single_peaks.bed.gz
1.11 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-1_mapped_to_genome.tar.gz
742.09 kB

Copy of PTBP1_Hela_WT_20130311_LUJH27a_2

STAR
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bw
106.02 kB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed_unmapped.out.mate1.fastq.gz
1.04 GB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bam
1.15 GB
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.bam.bai
20.56 kB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.tar.gz
2.45 MB
FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-2_fastqc.zip
321.13 kB
ptbp1-hela-wt-20130311-lujh27a-2.fastq.gz
1.02 GB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-2_trimmed.fastq.gz
1.04 GB
report.txt
668 B
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_singleAndMulti.bed.gz
91.04 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_reads_single.bed.gz
65.83 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_single.bed.gz
65.02 kB
ptbp1-hela-wt-20130311-lujh27a-2_premapped_to_ncRNAs_single.bedgraph
212 B
iCLIP reads proxy
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.fastq.gz
1.04 GB
fastqc
Directory
STAR
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.bam.bai
3.12 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_SJ.out.tab
1.75 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.bam
1.61 GB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_unmapped.out.mate1.fastq.gz
155.80 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_skipped.bam
7.86 kB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.bed.gz
70.79 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single.bedgraph
343.90 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_reads_single.bed.gz
72.97 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_singleAndMulti.bed.gz
100.26 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_gene.tsv
2.24 MB
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_summary_type.tsv
481 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome_single_peaks.bed.gz
1.79 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-2_mapped_to_genome.tar.gz
694.50 kB

Copy of input:SP3_HEK293_1MIO_1_20201219_FL

FASTQ file (CLIP)
input-sp3-hek293-1mio-1-20201219-fl.fastq.gz
806.61 MB
fastqc
Directory
input-sp3-hek293-1mio-1-20201219-fl_fastqc.zip
450.42 kB
Cutadapt (single-end)
report.txt
671 B
input-sp3-hek293-1mio-1-20201219-fl_trimmed.fastq.gz
815.98 MB
fastqc
Directory
iCount xlsites
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_skipped.bam
4.09 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bed.gz
125.78 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
218.56 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_reads_single.bed.gz
126.95 kB
input-sp3-hek293-1mio-1-20201219-fl_premapped_to_ncRNAs_single.bedgraph
218 B
STAR
input-sp3-hek293-1mio-1-20201219-fl_trimmed_unmapped.out.mate1.fastq.gz
690.35 MB
input-sp3-hek293-1mio-1-20201219-fl_trimmed.bam.bai
20.56 kB
input-sp3-hek293-1mio-1-20201219-fl_trimmed.bam
978.04 MB
input-sp3-hek293-1mio-1-20201219-fl_trimmed_stats.txt
1.79 kB
input-sp3-hek293-1mio-1-20201219-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.fastq.gz
690.35 MB
fastqc
Directory
STAR
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
200.27 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.bam.bai
2.74 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.bam
1.30 GB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_stats.txt
1.82 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_SJ.out.tab
4.88 MB
iCount xlsites
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_skipped.bam
11.07 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bed.gz
48.86 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_singleAndMulti.bed.gz
85.81 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_reads_single.bed.gz
50.59 MB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.bedgraph
231.26 MB
iCount summary
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_type.tsv
679 B
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_subtype.tsv
1.05 kB
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_summary_gene.tsv
3.65 MB
Paraclu
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single_peaks.bed.gz
462.00 kB
iCount RNA-maps
input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome_single.tar.gz
3.11 MB
PEKA
4mer analysis of input-sp3-hek293-1mio-1-20201219-fl_mapped_to_genome.tar.gz
743.65 kB

Copy of PTBP1_Hela_WT_20130311_LUJH27a_3

STAR
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_unmapped.out.mate1.fastq.gz
340.17 MB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bw
105.65 kB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.bam
379.07 MB
ptbp1-hela-wt-20130311-lujh27a-3_trimmed_stats.txt
1.78 kB
STAR
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_unmapped.out.mate1.fastq.gz
51.45 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.bam.bai
3.35 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_stats.txt
1.81 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_SJ.out.tab
627.08 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.bam
543.31 MB
FASTQ file (CLIP)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-3_fastqc.zip
317.98 kB
ptbp1-hela-wt-20130311-lujh27a-3.fastq.gz
334.64 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-3_trimmed.fastq.gz
340.24 MB
report.txt
668 B
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_reads_single.bed.gz
46.14 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_single.bed.gz
45.50 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_singleAndMulti.bed.gz
60.79 kB
ptbp1-hela-wt-20130311-lujh27a-3_premapped_to_ncRNAs_single.bedgraph
212 B
iCLIP reads proxy
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.fastq.gz
340.17 MB
fastqc
Directory
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.bed.gz
25.62 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_singleAndMulti.bed.gz
37.02 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_skipped.bam
5.16 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_reads_single.bed.gz
26.61 MB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.bedgraph
123.93 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_type.tsv
470 B
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_summary_gene.tsv
1.82 MB
Paraclu
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single_peaks.bed.gz
576.18 kB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome_single.tar.gz
1.43 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-3_mapped_to_genome.tar.gz
732.58 kB

Copy of PTBP1_Hela_WT_20130311_LUJH27a_4

FASTQ file (CLIP)
ptbp1-hela-wt-20130311-lujh27a-4_fastqc.zip
319.51 kB
ptbp1-hela-wt-20130311-lujh27a-4.fastq.gz
598.70 MB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.fastq.gz
610.29 MB
report.txt
668 B
STAR
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_SJ.out.tab
0 B
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bam
678.65 MB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_unmapped.out.mate1.fastq.gz
607.36 MB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bam.bai
20.56 kB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed_stats.txt
1.78 kB
ptbp1-hela-wt-20130311-lujh27a-4_trimmed.bw
105.94 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_single.bed.gz
57.38 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_skipped.bam
4.01 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_single.bedgraph
212 B
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_reads_single.bed.gz
57.99 kB
ptbp1-hela-wt-20130311-lujh27a-4_premapped_to_ncRNAs_singleAndMulti.bed.gz
76.75 kB
iCLIP reads proxy
fastqc
Directory
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.fastq.gz
607.36 MB
STAR
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_SJ.out.tab
1.14 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.bam
971.38 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.bam.bai
3.00 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_unmapped.out.mate1.fastq.gz
90.13 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_skipped.bam
5.64 kB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.bed.gz
45.17 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_reads_single.bed.gz
46.49 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.bedgraph
218.94 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_singleAndMulti.bed.gz
64.60 MB
iCount summary
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_gene.tsv
2.05 MB
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_summary_type.tsv
474 B
Paraclu
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single_peaks.bed.gz
1.07 MB
iCount RNA-maps
ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome_single.tar.gz
1.98 MB
PEKA
4mer analysis of ptbp1-hela-wt-20130311-lujh27a-4_mapped_to_genome.tar.gz
798.63 kB

Copy of PTBP1_HEK293_Ule 1MIO cells fastq trunc_20190612_JU

K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
8.17 MB
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
21.73 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
2.65 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
7.45 MB
iCount RNA-maps
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
713.37 kB
FASTQ file (single-end)
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju.fastq.gz
162.20 MB
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_fastqc.zip
409.42 kB
stderr.txt
1.60 kB
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
592.75 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
5.54 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
1.81 MB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.fastq.gz
163.65 MB
report.txt
718 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_fastqc.zip
405.13 kB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.tar.gz
5.05 MB
iCount summary
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_type.tsv
439 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_subtype.tsv
1021 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single_summary_gene.tsv
1.63 MB
Paraclu
peaks.bed.gz
112.02 kB
iCount RNA-maps
results.tar.gz
712.20 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam.bai
3.89 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_unmapped.out.mate1.fastq.gz
53.70 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam
326.00 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_SJ.out.tab
536.96 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bw
79.72 kB
K-mers
kmer_frequency_ncRNA.tsv
5.84 kB
kmer_frequency_utr3.tsv
5.64 kB
other_exon region.png
247.13 kB
kmer_frequency_intron.tsv
5.86 kB
positional_distribution_genome.tsv
557.44 kB
positional_distribution_intron.tsv
552.95 kB
positional_distribution_ncRNA.tsv
437.44 kB
intron region.png
183.76 kB
ncRNA region.png
220.28 kB
positional_distribution_utr3.tsv
372.10 kB
utr3 region.png
221.64 kB
positional_distribution_other_exon.tsv
243.36 kB
kmer_frequency_genome.tsv
5.87 kB
kmer_frequency_other_exon.tsv
5.52 kB
genome region.png
177.67 kB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_skipped.bam
4.21 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_singleAndMulti.bed.gz
15.59 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bed.gz
7.07 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bedgraph
31.27 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_reads_single.bed.gz
7.37 MB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_singleAndMulti.bed.gz
81.92 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bed.gz
42.15 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_reads_single.bed.gz
42.61 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.bedgraph
250 B
iCount reads proxy
fastqc
Directory
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.fastq.gz
163.95 MB
stderr.txt
1.97 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_fastqc.zip
407.07 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bw
74.36 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
54.61 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bam
304.59 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.bam.bai
3.99 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_SJ.out.tab
524.98 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.bed.gz
6.92 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_singleAndMulti.bed.gz
14.18 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_skipped.bam
4.35 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_reads_single.bed.gz
7.23 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.bedgraph
30.73 MB
iCount summary
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_gene.tsv
1.58 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_summary_subtype.tsv
1.03 kB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_single.tar.gz
7.78 MB
K-mers
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single.tar.gz
5.09 MB
Paraclu
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
161.33 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
718 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.fastq.gz
163.65 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_fastqc.zip
405.13 kB
STAR
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_unmapped.out.mate1.fastq.gz
163.95 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bam
238.43 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed.bw
105.62 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-ju_trimmed_stats.txt
1.78 kB
PEKA
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped.tar.gz
941.21 kB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped
Directory
iCount peaks
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bedgraph
9.21 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_scores.tsv.gz
22.70 MB
ptbp1-hek293-ule-1mio-cells-fastq-trunc-20190612-jufastqgz_unmapped_single_peaks.bed.gz
3.03 MB

Copy of PTBP1_HEK293_1MIO_rep2_20190610_JU

iCount reads proxy
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.fastq.gz
310.30 MB
stderr.txt
1.64 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_fastqc.zip
438.43 kB
fastqc
Directory
K-mers
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
3.55 MB
K-mers
other_exon region.png
260.14 kB
positional_distribution_intron.tsv
503.79 kB
kmer_frequency_intron.tsv
5.83 kB
intron region.png
182.28 kB
ncRNA region.png
228.47 kB
positional_distribution_utr3.tsv
261.01 kB
positional_distribution_ncRNA.tsv
432.35 kB
kmer_frequency_genome.tsv
5.83 kB
kmer_frequency_utr3.tsv
5.03 kB
genome region.png
191.61 kB
kmer_frequency_ncRNA.tsv
5.76 kB
positional_distribution_genome.tsv
533.79 kB
kmer_frequency_other_exon.tsv
3.61 kB
positional_distribution_other_exon.tsv
175.90 kB
utr3 region.png
249.73 kB
K-mers
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
3.47 MB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bed.gz
7.49 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_singleAndMulti.bed.gz
12.27 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bedgraph
34.35 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_reads_single.bed.gz
8.65 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_skipped.bam
4.96 kB
iCount RNA-maps
results.tar.gz
774.58 kB
FASTQ file (single-end)
stderr.txt
1.26 kB
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_fastqc.zip
469.35 kB
ptbp1-hek293-1mio-rep2-20190610-ju.fastq.gz
315.10 MB
STAR
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam.bai
3.96 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
55.17 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam
427.53 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_stats.txt
1.81 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_SJ.out.tab
414.20 kB
iCount summary
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_type.tsv
437 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_subtype.tsv
1023 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single_summary_gene.tsv
1.54 MB
Paraclu
peaks.bed.gz
58.04 kB
Cutadapt (single-end)
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_fastqc.zip
439.24 kB
report.txt
703 B
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.fastq.gz
309.34 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.tar.gz
776.47 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.fastq.gz
309.34 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_fastqc.zip
439.24 kB
report.txt
703 B
STAR
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bam
444.17 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
310.30 MB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed.bw
105.75 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_stats.txt
1.78 kB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bed.gz
36.05 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_reads_single.bed.gz
37.80 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_singleAndMulti.bed.gz
74.26 kB
ptbp1-hek293-1mio-rep2-20190610-ju_trimmed_single.bedgraph
216 B
STAR
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
51.85 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.bam.bai
4.01 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped.bam
414.02 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_SJ.out.tab
361.29 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_stats.txt
1.81 kB
iCount xlsites
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_singleAndMulti.bed.gz
11.76 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_skipped.bam
5.04 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_reads_single.bed.gz
8.57 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.bed.gz
7.42 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.bedgraph
34.06 MB
iCount summary
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_subtype.tsv
1.03 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_summary_gene.tsv
1.52 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single.tar.gz
772.89 kB
Paraclu
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
95.09 kB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
135.80 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
5.82 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
395.01 kB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
819.88 kB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
23.62 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
2.02 MB
iCount peaks
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bedgraph
4.72 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_peaks.bed.gz
1.50 MB
ptbp1-hek293-1mio-rep2-20190610-jufastqgz_unmapped_single_scores.tsv.gz
24.78 MB

Copy of PTBP1_HEK293_1MIO_rep1_20190610_JU

Paraclu
peaks.bed.gz
121.17 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
4.70 MB
iCount summary
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_type.tsv
439 B
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_gene.tsv
1.76 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_summary_subtype.tsv
1.01 kB
FASTQ file (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju.fastq.gz
238.64 MB
ptbp1-hek293-1mio-rep1-20190610-ju_fastqc.zip
478.78 kB
stderr.txt
1.26 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.tar.gz
4.46 MB
STAR
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
42.04 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam.bai
3.49 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_SJ.out.tab
588.94 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam
431.18 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_stats.txt
1.81 kB
K-mers
positional_distribution_intron.tsv
550.26 kB
kmer_frequency_intron.tsv
5.85 kB
ncRNA region.png
202.89 kB
intron region.png
186.06 kB
other_exon region.png
232.50 kB
kmer_frequency_ncRNA.tsv
5.81 kB
kmer_frequency_utr3.tsv
5.43 kB
positional_distribution_ncRNA.tsv
497.90 kB
kmer_frequency_genome.tsv
5.86 kB
positional_distribution_genome.tsv
558.15 kB
positional_distribution_utr3.tsv
368.27 kB
utr3 region.png
203.70 kB
kmer_frequency_other_exon.tsv
5.23 kB
genome region.png
181.18 kB
positional_distribution_other_exon.tsv
232.48 kB
Cutadapt (single-end)
report.txt
702 B
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.fastq.gz
234.20 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_fastqc.zip
463.26 kB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_singleAndMulti.bed.gz
23.34 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bed.gz
13.34 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_reads_single.bed.gz
14.58 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_skipped.bam
3.64 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bedgraph
61.88 MB
iCount RNA-maps
results.tar.gz
966.05 kB
Cutadapt (single-end)
fastqc
Directory
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.fastq.gz
234.20 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_fastqc.zip
463.26 kB
report.txt
702 B
STAR
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_unmapped.out.mate1.fastq.gz
234.42 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam.bai
20.56 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bam
352.59 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_stats.txt
1.78 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_SJ.out.tab
0 B
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed.bw
105.93 kB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_scores.tsv.gz
42.25 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_peaks.bed.gz
1.50 MB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single_peaks.bedgraph
4.51 MB
K-mers
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.tar.gz
7.22 MB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_skipped.bam
3.96 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bed.gz
44.61 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_singleAndMulti.bed.gz
82.05 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_reads_single.bed.gz
46.01 kB
ptbp1-hek293-1mio-rep1-20190610-ju_trimmed_single.bedgraph
216 B
iCount reads proxy
fastqc
Directory
stderr.txt
1.64 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_fastqc.zip
459.89 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.fastq.gz
234.42 MB
STAR
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.bam
409.50 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_stats.txt
1.81 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_SJ.out.tab
459.71 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped.bam.bai
3.77 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_unmapped.out.mate1.fastq.gz
43.39 MB
iCount xlsites
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_skipped.bam
3.68 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_reads_single.bed.gz
14.27 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.bed.gz
13.04 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_singleAndMulti.bed.gz
21.89 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.bedgraph
60.61 MB
iCount RNA-maps
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
951.23 kB
iCount summary
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_type.tsv
471 B
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_gene.tsv
1.72 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_summary_subtype.tsv
1.04 kB
Paraclu
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
191.11 kB
K-mers
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single.tar.gz
4.44 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
221.85 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
676.49 kB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
9.83 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
1.47 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
41.62 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
4.40 MB
iCount peaks
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bedgraph
9.81 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_scores.tsv.gz
43.97 MB
ptbp1-hek293-1mio-rep1-20190610-jufastqgz_unmapped_single_peaks.bed.gz
2.82 MB