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Folder iconEIF4A3_iCLIP_PRMT5i

Llywelyn Griffith
June 14, 2021

EIF4A3_iCLIP_DMSO_48hr_grouped

iCount group
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.bed.gz
93.88 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_reads.bed.gz
98.85 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.bedgraph
453.46 MB
iCount RNA-maps
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.tar.gz
4.37 MB
Paraclu
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_peaks.bed.gz
1.16 MB
iCount summary
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_type.tsv
448 B
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_subtype.tsv
1.02 kB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_gene.tsv
3.61 MB
iCount annotate
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_annotated.bed.gz
110.83 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_annotated.bedgraph
453.46 MB
PEKA
4mer analysis of EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.tar.gz
715.21 kB

EIF4A3_iCLIP_LLY_48hr_grouped

iCount group
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.bed.gz
65.78 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_reads.bed.gz
69.95 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.bedgraph
314.76 MB
iCount annotate
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_annotated.bed.gz
78.59 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_annotated.bedgraph
314.76 MB
Paraclu
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_peaks.bed.gz
671.16 kB
PEKA
4mer analysis of EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.tar.gz
820.54 kB
iCount RNA-maps
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.tar.gz
3.84 MB
iCount summary
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_type.tsv
449 B
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_subtype.tsv
1.03 kB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_gene.tsv
3.57 MB

PM21097_fastq

FASTQ file (single-end)
GRI3353A1-A34_S2_L002_R1_001.fastq.gz
19.93 GB
fastqc
Directory
stderr.txt
1.21 kB
GRI3353A1-A34_S2_L002_R1_001_fastqc.zip
538.35 kB

EIF4A3_iCLIP_DMSO_48hr_1

FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-1.fastq.gz
587.89 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-1_fastqc.zip
443.69 kB
iCount summary
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_type.tsv
625 B
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_gene.tsv
3.24 MB
Paraclu
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_peaks.bed.gz
386.07 kB
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-1_trimmed.fastq.gz
605.15 MB
fastqc
Directory
STAR
eif4a3-iclip-dmso-48hr-1_trimmed_unmapped.out.mate1.fastq.gz
98.95 MB
eif4a3-iclip-dmso-48hr-1_trimmed.bam.bai
3.32 MB
eif4a3-iclip-dmso-48hr-1_trimmed.bam
1.09 GB
eif4a3-iclip-dmso-48hr-1_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-1_trimmed_SJ.out.tab
3.39 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_skipped.bam
6.14 kB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.bed.gz
44.91 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_singleAndMulti.bed.gz
60.64 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_reads_single.bed.gz
46.91 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.bedgraph
214.70 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.tar.gz
3.16 MB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-1_mapped_to_genome.tar.gz
751.76 kB

EIF4A3_iCLIP_DMSO_48hr_3

FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-3.fastq.gz
526.75 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-3_fastqc.zip
446.34 kB
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-3_trimmed.fastq.gz
542.41 MB
fastqc
Directory
iCount summary
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_type.tsv
623 B
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_gene.tsv
3.03 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.tar.gz
2.65 MB
Paraclu
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_peaks.bed.gz
241.00 kB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-3_mapped_to_genome.tar.gz
723.05 kB
STAR
eif4a3-iclip-dmso-48hr-3_trimmed_unmapped.out.mate1.fastq.gz
90.10 MB
eif4a3-iclip-dmso-48hr-3_trimmed.bam.bai
3.55 MB
eif4a3-iclip-dmso-48hr-3_trimmed.bam
923.85 MB
eif4a3-iclip-dmso-48hr-3_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-3_trimmed_SJ.out.tab
2.71 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_skipped.bam
4.96 kB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.bed.gz
33.07 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_singleAndMulti.bed.gz
45.32 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_reads_single.bed.gz
35.29 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.bedgraph
157.09 MB

EIF4A3_iCLIP_LLY_48hr_2

FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-2.fastq.gz
289.61 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-2_fastqc.zip
451.67 kB
Paraclu
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_peaks.bed.gz
72.22 kB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-2_mapped_to_genome.tar.gz
620.03 kB
iCount summary
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_type.tsv
621 B
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_gene.tsv
2.87 MB
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-2_trimmed.fastq.gz
297.51 MB
fastqc
Directory
STAR
eif4a3-iclip-lly-48hr-2_trimmed_unmapped.out.mate1.fastq.gz
67.62 MB
eif4a3-iclip-lly-48hr-2_trimmed.bam.bai
3.51 MB
eif4a3-iclip-lly-48hr-2_trimmed.bam
494.06 MB
eif4a3-iclip-lly-48hr-2_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-2_trimmed_SJ.out.tab
1.71 MB
iCount xlsites
eif4a3-iclip-lly-48hr-2_mapped_to_genome_skipped.bam
4.69 kB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.bed.gz
16.60 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_singleAndMulti.bed.gz
25.78 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_reads_single.bed.gz
17.86 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.bedgraph
77.32 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.tar.gz
1.94 MB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
2.46 GB
fastqc
Directory
demux_nomatch_fastqc.zip
464.10 kB

EIF4A3_iCLIP_DMSO_48hr_2

FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-2.fastq.gz
351.47 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-2_fastqc.zip
448.09 kB
iCount summary
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_type.tsv
617 B
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_gene.tsv
2.84 MB
Paraclu
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_peaks.bed.gz
131.46 kB
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-2_trimmed.fastq.gz
362.38 MB
fastqc
Directory
STAR
eif4a3-iclip-dmso-48hr-2_trimmed_unmapped.out.mate1.fastq.gz
51.97 MB
eif4a3-iclip-dmso-48hr-2_trimmed.bam.bai
3.57 MB
eif4a3-iclip-dmso-48hr-2_trimmed.bam
623.82 MB
eif4a3-iclip-dmso-48hr-2_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-2_trimmed_SJ.out.tab
2.06 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_skipped.bam
5.11 kB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.bed.gz
23.94 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_singleAndMulti.bed.gz
31.89 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_reads_single.bed.gz
25.62 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.bedgraph
113.21 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.tar.gz
2.30 MB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-2_mapped_to_genome.tar.gz
669.77 kB

EIF4A3_iCLIP_LLY_48hr_3

FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-3.fastq.gz
208.76 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-3_fastqc.zip
459.91 kB
iCount summary
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_type.tsv
623 B
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_gene.tsv
2.72 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.tar.gz
1.68 MB
Paraclu
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_peaks.bed.gz
45.74 kB
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-3_trimmed.fastq.gz
214.59 MB
fastqc
Directory
STAR
eif4a3-iclip-lly-48hr-3_trimmed_unmapped.out.mate1.fastq.gz
42.96 MB
eif4a3-iclip-lly-48hr-3_trimmed.bam.bai
3.75 MB
eif4a3-iclip-lly-48hr-3_trimmed.bam
373.75 MB
eif4a3-iclip-lly-48hr-3_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-3_trimmed_SJ.out.tab
1.46 MB
iCount xlsites
eif4a3-iclip-lly-48hr-3_mapped_to_genome_skipped.bam
3.99 kB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.bed.gz
10.91 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_singleAndMulti.bed.gz
16.44 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_reads_single.bed.gz
11.84 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.bedgraph
50.08 MB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-3_mapped_to_genome.tar.gz
566.63 kB

EIF4A3_iCLIP_LLY_48hr_1

iCount summary
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_type.tsv
627 B
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_gene.tsv
3.21 MB
Paraclu
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_peaks.bed.gz
323.45 kB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-1_mapped_to_genome.tar.gz
722.04 kB
FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-1.fastq.gz
609.62 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-1_fastqc.zip
446.69 kB
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-1_trimmed.fastq.gz
627.08 MB
fastqc
Directory
STAR
eif4a3-iclip-lly-48hr-1_trimmed_unmapped.out.mate1.fastq.gz
106.72 MB
eif4a3-iclip-lly-48hr-1_trimmed.bam.bai
3.27 MB
eif4a3-iclip-lly-48hr-1_trimmed.bam
1.03 GB
eif4a3-iclip-lly-48hr-1_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-1_trimmed_SJ.out.tab
3.13 MB
iCount xlsites
eif4a3-iclip-lly-48hr-1_mapped_to_genome_skipped.bam
5.40 kB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.bed.gz
42.30 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_singleAndMulti.bed.gz
56.85 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_reads_single.bed.gz
44.80 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.bedgraph
201.67 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.tar.gz
3.12 MB

No Sample

iCount demultiplex (from annotation file)
demultiplexing_stats.txt
1.94 kB
FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-2.fastq.gz
289.61 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-2_fastqc.zip
451.67 kB
FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-3.fastq.gz
526.75 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-3_fastqc.zip
446.34 kB
FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-3.fastq.gz
208.76 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-3_fastqc.zip
459.91 kB
iCount summary
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_type.tsv
623 B
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_summary_gene.tsv
2.72 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.tar.gz
1.68 MB
Paraclu
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single_peaks.bed.gz
45.74 kB
Paraclu
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_peaks.bed.gz
72.22 kB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-2_mapped_to_genome.tar.gz
620.03 kB
iCount summary
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_type.tsv
627 B
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_summary_gene.tsv
3.21 MB
Paraclu
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single_peaks.bed.gz
323.45 kB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-1_mapped_to_genome.tar.gz
722.04 kB
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-3_trimmed.fastq.gz
542.41 MB
fastqc
Directory
iCount summary
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_type.tsv
623 B
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_summary_gene.tsv
3.03 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.tar.gz
2.65 MB
Paraclu
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single_peaks.bed.gz
241.00 kB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-3_mapped_to_genome.tar.gz
723.05 kB
FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-2.fastq.gz
351.47 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-2_fastqc.zip
448.09 kB
iCount summary
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_type.tsv
617 B
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_summary_gene.tsv
2.84 MB
Paraclu
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single_peaks.bed.gz
131.46 kB
FASTQ file (CLIP)
eif4a3-iclip-dmso-48hr-1.fastq.gz
587.89 MB
fastqc
Directory
eif4a3-iclip-dmso-48hr-1_fastqc.zip
443.69 kB
iCount summary
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_type.tsv
625 B
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_summary_gene.tsv
3.24 MB
Paraclu
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single_peaks.bed.gz
386.07 kB
iCount group
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.bed.gz
65.78 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_reads.bed.gz
69.95 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.bedgraph
314.76 MB
iCount summary
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_type.tsv
621 B
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single_summary_gene.tsv
2.87 MB
FASTQ file (CLIP)
eif4a3-iclip-lly-48hr-1.fastq.gz
609.62 MB
fastqc
Directory
eif4a3-iclip-lly-48hr-1_fastqc.zip
446.69 kB
FASTQ file (single-end)
GRI3353A1-A34_S2_L002_R1_001.fastq.gz
19.93 GB
fastqc
Directory
stderr.txt
1.21 kB
GRI3353A1-A34_S2_L002_R1_001_fastqc.zip
538.35 kB
Upload iCount sample annotation
pm21097_sample_annotation_sheet_final.xlsx
208.25 kB
pm21097_sample_annotation_sheet_final.tab.gz
2.30 kB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
2.46 GB
fastqc
Directory
demux_nomatch_fastqc.zip
464.10 kB
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-3_trimmed.fastq.gz
214.59 MB
fastqc
Directory
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-2_trimmed.fastq.gz
297.51 MB
fastqc
Directory
Cutadapt (single-end)
report.txt
659 B
eif4a3-iclip-lly-48hr-1_trimmed.fastq.gz
627.08 MB
fastqc
Directory
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-2_trimmed.fastq.gz
362.38 MB
fastqc
Directory
Cutadapt (single-end)
report.txt
660 B
eif4a3-iclip-dmso-48hr-1_trimmed.fastq.gz
605.15 MB
fastqc
Directory
STAR
eif4a3-iclip-lly-48hr-3_trimmed_unmapped.out.mate1.fastq.gz
42.96 MB
eif4a3-iclip-lly-48hr-3_trimmed.bam.bai
3.75 MB
eif4a3-iclip-lly-48hr-3_trimmed.bam
373.75 MB
eif4a3-iclip-lly-48hr-3_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-3_trimmed_SJ.out.tab
1.46 MB
STAR
eif4a3-iclip-lly-48hr-2_trimmed_unmapped.out.mate1.fastq.gz
67.62 MB
eif4a3-iclip-lly-48hr-2_trimmed.bam.bai
3.51 MB
eif4a3-iclip-lly-48hr-2_trimmed.bam
494.06 MB
eif4a3-iclip-lly-48hr-2_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-2_trimmed_SJ.out.tab
1.71 MB
STAR
eif4a3-iclip-lly-48hr-1_trimmed_unmapped.out.mate1.fastq.gz
106.72 MB
eif4a3-iclip-lly-48hr-1_trimmed.bam.bai
3.27 MB
eif4a3-iclip-lly-48hr-1_trimmed.bam
1.03 GB
eif4a3-iclip-lly-48hr-1_trimmed_stats.txt
1.81 kB
eif4a3-iclip-lly-48hr-1_trimmed_SJ.out.tab
3.13 MB
STAR
eif4a3-iclip-dmso-48hr-2_trimmed_unmapped.out.mate1.fastq.gz
51.97 MB
eif4a3-iclip-dmso-48hr-2_trimmed.bam.bai
3.57 MB
eif4a3-iclip-dmso-48hr-2_trimmed.bam
623.82 MB
eif4a3-iclip-dmso-48hr-2_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-2_trimmed_SJ.out.tab
2.06 MB
STAR
eif4a3-iclip-dmso-48hr-3_trimmed_unmapped.out.mate1.fastq.gz
90.10 MB
eif4a3-iclip-dmso-48hr-3_trimmed.bam.bai
3.55 MB
eif4a3-iclip-dmso-48hr-3_trimmed.bam
923.85 MB
eif4a3-iclip-dmso-48hr-3_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-3_trimmed_SJ.out.tab
2.71 MB
STAR
eif4a3-iclip-dmso-48hr-1_trimmed_unmapped.out.mate1.fastq.gz
98.95 MB
eif4a3-iclip-dmso-48hr-1_trimmed.bam.bai
3.32 MB
eif4a3-iclip-dmso-48hr-1_trimmed.bam
1.09 GB
eif4a3-iclip-dmso-48hr-1_trimmed_stats.txt
1.81 kB
eif4a3-iclip-dmso-48hr-1_trimmed_SJ.out.tab
3.39 MB
iCount xlsites
eif4a3-iclip-lly-48hr-3_mapped_to_genome_skipped.bam
3.99 kB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.bed.gz
10.91 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_singleAndMulti.bed.gz
16.44 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_reads_single.bed.gz
11.84 MB
eif4a3-iclip-lly-48hr-3_mapped_to_genome_single.bedgraph
50.08 MB
iCount xlsites
eif4a3-iclip-lly-48hr-2_mapped_to_genome_skipped.bam
4.69 kB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.bed.gz
16.60 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_singleAndMulti.bed.gz
25.78 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_reads_single.bed.gz
17.86 MB
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.bedgraph
77.32 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_skipped.bam
5.11 kB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.bed.gz
23.94 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_singleAndMulti.bed.gz
31.89 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_reads_single.bed.gz
25.62 MB
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.bedgraph
113.21 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_skipped.bam
4.96 kB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.bed.gz
33.07 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_singleAndMulti.bed.gz
45.32 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_reads_single.bed.gz
35.29 MB
eif4a3-iclip-dmso-48hr-3_mapped_to_genome_single.bedgraph
157.09 MB
iCount xlsites
eif4a3-iclip-lly-48hr-1_mapped_to_genome_skipped.bam
5.40 kB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.bed.gz
42.30 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_singleAndMulti.bed.gz
56.85 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_reads_single.bed.gz
44.80 MB
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.bedgraph
201.67 MB
iCount xlsites
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_skipped.bam
6.14 kB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.bed.gz
44.91 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_singleAndMulti.bed.gz
60.64 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_reads_single.bed.gz
46.91 MB
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.bedgraph
214.70 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-2_mapped_to_genome_single.tar.gz
1.94 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-2_mapped_to_genome_single.tar.gz
2.30 MB
iCount RNA-maps
eif4a3-iclip-dmso-48hr-1_mapped_to_genome_single.tar.gz
3.16 MB
iCount RNA-maps
eif4a3-iclip-lly-48hr-1_mapped_to_genome_single.tar.gz
3.12 MB
PEKA
4mer analysis of eif4a3-iclip-lly-48hr-3_mapped_to_genome.tar.gz
566.63 kB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-2_mapped_to_genome.tar.gz
669.77 kB
PEKA
4mer analysis of eif4a3-iclip-dmso-48hr-1_mapped_to_genome.tar.gz
751.76 kB
iCount group
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.bed.gz
93.88 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_reads.bed.gz
98.85 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.bedgraph
453.46 MB
iCount RNA-maps
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.tar.gz
4.37 MB
Paraclu
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_peaks.bed.gz
1.16 MB
iCount annotate
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_annotated.bed.gz
78.59 MB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_annotated.bedgraph
314.76 MB
Paraclu
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_peaks.bed.gz
671.16 kB
PEKA
4mer analysis of EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.tar.gz
820.54 kB
iCount RNA-maps
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna.tar.gz
3.84 MB
iCount summary
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_type.tsv
449 B
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_subtype.tsv
1.03 kB
EIF4A3_iCLIP_LLY_48hr_grouped_grouped_cdna_summary_gene.tsv
3.57 MB
iCount summary
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_type.tsv
448 B
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_subtype.tsv
1.02 kB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_summary_gene.tsv
3.61 MB
iCount annotate
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_annotated.bed.gz
110.83 MB
EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna_annotated.bedgraph
453.46 MB
PEKA
4mer analysis of EIF4A3_iCLIP_DMSO_48hr_grouped_grouped_cdna.tar.gz
715.21 kB