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Folder iconMETTL3 iCLIP new analysis

Patrick Toolan-Kerr
Feb. 8, 2021

Copy of METTL3_ESC_WT_FGF_rep3_20201119_PTK

iCount RNA-maps
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.tar.gz
666.13 kB
Paraclu
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
48.60 kB
iCount summary
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_type.tsv
615 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1007 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.88 MB
iCount xlsites
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_skipped.bam
4.33 kB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.bed.gz
1.56 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
11.47 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1.73 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.bedgraph
6.23 MB
STAR
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
125.30 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.bam.bai
4.34 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.bam
666.87 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_SJ.out.tab
345.91 kB
Cutadapt (single-end)
report.txt
672 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.fastq.gz
275.18 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep3-20201119-ptk.fastq.gz
288.26 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep3-20201119-ptk_fastqc.zip
496.29 kB

No Sample

Paraclu
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
29.75 kB
STAR
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
20.22 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bam.bai
4.57 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bam
163.37 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_stats.txt
1.80 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_SJ.out.tab
181.93 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bw
11.07 kB
iCount summary
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_type.tsv
610 B
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1001 B
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.31 MB
Paraclu
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
3.56 kB
iCount RNA-maps
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.tar.gz
462.15 kB
iCount summary
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_type.tsv
601 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
985 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.06 MB
Paraclu
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
156.99 kB
iCount xlsites
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_skipped.bam
1.55 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.bed.gz
408.40 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
5.81 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_reads_single.bed.gz
431.01 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.bedgraph
1.45 MB
STAR
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
13.86 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bam.bai
4.60 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bam
97.85 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_stats.txt
1.80 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_SJ.out.tab
133.31 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bw
10.47 kB
Cutadapt (single-end)
report.txt
677 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.fastq.gz
34.33 MB
fastqc
Directory
FASTQ file (CLIP)
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk.fastq.gz
35.85 MB
fastqc
Directory
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_fastqc.zip
511.62 kB
iCount RNA-maps
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.tar.gz
566.64 kB
iCount summary
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_type.tsv
620 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1023 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.78 MB
iCount xlsites
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_skipped.bam
2.45 kB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.bed.gz
1.40 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
12.15 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1.49 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.bedgraph
5.29 MB
STAR
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
115.37 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.bam.bai
4.49 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.bam
1.00 GB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_SJ.out.tab
216.24 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.fastq.gz
345.87 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep1-20201119-ptk.fastq.gz
361.50 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep1-20201119-ptk_fastqc.zip
533.26 kB
iCount RNA-maps
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.tar.gz
546.28 kB
Paraclu
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
26.49 kB
iCount summary
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_type.tsv
614 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1001 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.55 MB
iCount xlsites
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_skipped.bam
2.44 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.bed.gz
860.05 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
8.41 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_reads_single.bed.gz
939.01 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.bedgraph
3.22 MB
STAR
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
65.93 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.bam.bai
4.49 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.bam
377.98 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_SJ.out.tab
174.84 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.fastq.gz
145.19 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep2-20201119-ptk.fastq.gz
148.53 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep2-20201119-ptk_fastqc.zip
501.37 kB
iCount RNA-maps
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.tar.gz
666.13 kB
Paraclu
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
48.60 kB
iCount summary
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_type.tsv
615 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1007 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.88 MB
iCount xlsites
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_skipped.bam
4.33 kB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.bed.gz
1.56 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
11.47 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1.73 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_mapped_to_genome_single.bedgraph
6.23 MB
STAR
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
125.30 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.bam.bai
4.34 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.bam
666.87 MB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed_SJ.out.tab
345.91 kB
Cutadapt (single-end)
report.txt
672 B
mettl3-esc-wt-fgf-rep3-20201119-ptk_trimmed.fastq.gz
275.18 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep3-20201119-ptk.fastq.gz
288.26 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep3-20201119-ptk_fastqc.zip
496.29 kB
Paraclu
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
22.50 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.tar.gz
466.17 kB
iCount summary
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_type.tsv
604 B
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
995 B
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.26 MB
iCount xlsites
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_skipped.bam
2.09 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.bed.gz
561.18 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
6.43 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_reads_single.bed.gz
591.09 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.bedgraph
2.01 MB
Cutadapt (single-end)
report.txt
672 B
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.fastq.gz
55.37 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep1-20201119-ptk.fastq.gz
58.09 MB
fastqc
Directory
mettl3-esc-wt-meki-rep1-20201119-ptk_fastqc.zip
527.64 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.tar.gz
487.19 kB
iCount xlsites
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_skipped.bam
2.02 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.bed.gz
648.76 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
6.48 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_reads_single.bed.gz
687.34 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.bedgraph
2.36 MB
STAR
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
40.25 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.bam.bai
4.57 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.bam
253.58 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_stats.txt
1.80 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_SJ.out.tab
109.09 kB
Cutadapt (single-end)
report.txt
673 B
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.fastq.gz
89.03 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep2-20201119-ptk.fastq.gz
95.30 MB
fastqc
Directory
mettl3-esc-wt-meki-rep2-20201119-ptk_fastqc.zip
523.01 kB
Paraclu
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
52.94 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.tar.gz
540.84 kB
iCount summary
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_type.tsv
608 B
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1004 B
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.58 MB
iCount xlsites
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_skipped.bam
3.94 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.bed.gz
954.68 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
5.48 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1009.19 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.bedgraph
3.54 MB
STAR
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
25.46 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bam.bai
4.44 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bam
149.42 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_SJ.out.tab
171.43 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bw
10.84 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.fastq.gz
72.23 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep3-20201119-ptk.fastq.gz
72.43 MB
fastqc
Directory
mettl3-esc-wt-meki-rep3-20201119-ptk_fastqc.zip
503.00 kB
iCount group
METTL3_FGF_merged_grouped_cdna.bed.gz
3.46 MB
METTL3_FGF_merged_grouped_reads.bed.gz
3.77 MB
METTL3_FGF_merged_grouped_cdna.bedgraph
13.84 MB
iCount annotate
METTL3_FGF_merged_grouped_cdna_annotated.bed.gz
4.37 MB
METTL3_FGF_merged_grouped_cdna_annotated.bedgraph
13.84 MB
Paraclu
METTL3_FGF_merged_grouped_cdna_peaks.bed.gz
228.52 kB
iCount RNA-maps
METTL3_FGF_merged_grouped_cdna.tar.gz
870.31 kB
iCount summary
METTL3_MEKi_merged_grouped_cdna_summary_type.tsv
435 B
METTL3_MEKi_merged_grouped_cdna_summary_subtype.tsv
1013 B
METTL3_MEKi_merged_grouped_cdna_summary_gene.tsv
2.04 MB
iCount annotate
METTL3_MEKi_merged_grouped_cdna_annotated.bed.gz
2.42 MB
METTL3_MEKi_merged_grouped_cdna_annotated.bedgraph
7.44 MB
Paraclu
METTL3_MEKi_merged_grouped_cdna_peaks.bed.gz
103.65 kB
iCount RNA-maps
METTL3_MEKi_merged_grouped_cdna.tar.gz
639.72 kB
iCount summary
METTL3_FGF_merged_grouped_cdna_summary_type.tsv
443 B
METTL3_FGF_merged_grouped_cdna_summary_subtype.tsv
1.00 kB
METTL3_FGF_merged_grouped_cdna_summary_gene.tsv
2.38 MB
iCount group
METTL3_MEKi_merged_grouped_cdna.bed.gz
1.92 MB
METTL3_MEKi_merged_grouped_reads.bed.gz
2.03 MB
METTL3_MEKi_merged_grouped_cdna.bedgraph
7.44 MB
PEKA
6mer analysis of METTL3_MEKi_merged_grouped_cdna.tar.gz
2.77 MB

Copy of IgG:METTL3_ESC_WT_METTL3_FGF_20201119_PTK

Paraclu
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
3.56 kB
iCount RNA-maps
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.tar.gz
462.15 kB
iCount summary
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_type.tsv
601 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
985 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.06 MB
iCount xlsites
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_skipped.bam
1.55 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.bed.gz
408.40 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
5.81 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_reads_single.bed.gz
431.01 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_mapped_to_genome_single.bedgraph
1.45 MB
STAR
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
13.86 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bam.bai
4.60 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bam
97.85 MB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_stats.txt
1.80 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed_SJ.out.tab
133.31 kB
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.bw
10.47 kB
Cutadapt (single-end)
report.txt
677 B
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_trimmed.fastq.gz
34.33 MB
fastqc
Directory
FASTQ file (CLIP)
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk.fastq.gz
35.85 MB
fastqc
Directory
igg-mettl3-esc-wt-mettl3-fgf-20201119-ptk_fastqc.zip
511.62 kB

Copy of METTL3_ESC_WT_FGF_rep1_20201119_PTK

Paraclu
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
156.99 kB
iCount RNA-maps
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.tar.gz
566.64 kB
iCount summary
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_type.tsv
620 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1023 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.78 MB
iCount xlsites
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_skipped.bam
2.45 kB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.bed.gz
1.40 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
12.15 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1.49 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_mapped_to_genome_single.bedgraph
5.29 MB
STAR
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
115.37 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.bam.bai
4.49 MB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.bam
1.00 GB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed_SJ.out.tab
216.24 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-fgf-rep1-20201119-ptk_trimmed.fastq.gz
345.87 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep1-20201119-ptk.fastq.gz
361.50 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep1-20201119-ptk_fastqc.zip
533.26 kB

Copy of METTL3_ESC_WT_FGF_rep2_20201119_PTK

iCount RNA-maps
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.tar.gz
546.28 kB
Paraclu
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
26.49 kB
iCount summary
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_type.tsv
614 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1001 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.55 MB
iCount xlsites
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_skipped.bam
2.44 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.bed.gz
860.05 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
8.41 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_reads_single.bed.gz
939.01 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_mapped_to_genome_single.bedgraph
3.22 MB
STAR
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
65.93 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.bam.bai
4.49 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.bam
377.98 MB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed_SJ.out.tab
174.84 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-fgf-rep2-20201119-ptk_trimmed.fastq.gz
145.19 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-fgf-rep2-20201119-ptk.fastq.gz
148.53 MB
fastqc
Directory
mettl3-esc-wt-fgf-rep2-20201119-ptk_fastqc.zip
501.37 kB

Copy of METTL3_ESC_WT_MEKi_rep1_20201119_PTK

STAR
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
20.22 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bam.bai
4.57 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bam
163.37 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_stats.txt
1.80 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed_SJ.out.tab
181.93 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.bw
11.07 kB
Paraclu
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
22.50 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.tar.gz
466.17 kB
iCount summary
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_type.tsv
604 B
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
995 B
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.26 MB
iCount xlsites
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_skipped.bam
2.09 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.bed.gz
561.18 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
6.43 MB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_reads_single.bed.gz
591.09 kB
mettl3-esc-wt-meki-rep1-20201119-ptk_mapped_to_genome_single.bedgraph
2.01 MB
Cutadapt (single-end)
report.txt
672 B
mettl3-esc-wt-meki-rep1-20201119-ptk_trimmed.fastq.gz
55.37 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep1-20201119-ptk.fastq.gz
58.09 MB
fastqc
Directory
mettl3-esc-wt-meki-rep1-20201119-ptk_fastqc.zip
527.64 kB

Copy of METTL3_ESC_WT_MEKi_rep2_20201119_PTK

iCount summary
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_type.tsv
610 B
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1001 B
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.31 MB
Paraclu
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
29.75 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.tar.gz
487.19 kB
iCount xlsites
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_skipped.bam
2.02 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.bed.gz
648.76 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
6.48 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_reads_single.bed.gz
687.34 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_mapped_to_genome_single.bedgraph
2.36 MB
STAR
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
40.25 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.bam.bai
4.57 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.bam
253.58 MB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_stats.txt
1.80 kB
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed_SJ.out.tab
109.09 kB
Cutadapt (single-end)
report.txt
673 B
mettl3-esc-wt-meki-rep2-20201119-ptk_trimmed.fastq.gz
89.03 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep2-20201119-ptk.fastq.gz
95.30 MB
fastqc
Directory
mettl3-esc-wt-meki-rep2-20201119-ptk_fastqc.zip
523.01 kB

Copy of METTL3_ESC_WT_MEKi_rep3_20201119_PTK

Paraclu
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_peaks.bed.gz
52.94 kB
iCount RNA-maps
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.tar.gz
540.84 kB
iCount summary
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_type.tsv
608 B
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_subtype.tsv
1004 B
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single_summary_gene.tsv
1.58 MB
iCount xlsites
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_skipped.bam
3.94 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.bed.gz
954.68 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_singleAndMulti.bed.gz
5.48 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_reads_single.bed.gz
1009.19 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_mapped_to_genome_single.bedgraph
3.54 MB
STAR
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_unmapped.out.mate1.fastq.gz
25.46 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bam.bai
4.44 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bam
149.42 MB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_stats.txt
1.81 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed_SJ.out.tab
171.43 kB
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.bw
10.84 kB
Cutadapt (single-end)
report.txt
671 B
mettl3-esc-wt-meki-rep3-20201119-ptk_trimmed.fastq.gz
72.23 MB
fastqc
Directory
FASTQ file (CLIP)
mettl3-esc-wt-meki-rep3-20201119-ptk.fastq.gz
72.43 MB
fastqc
Directory
mettl3-esc-wt-meki-rep3-20201119-ptk_fastqc.zip
503.00 kB

METTL3_FGF_merged

iCount group
METTL3_FGF_merged_grouped_cdna.bed.gz
3.46 MB
METTL3_FGF_merged_grouped_reads.bed.gz
3.77 MB
METTL3_FGF_merged_grouped_cdna.bedgraph
13.84 MB
iCount annotate
METTL3_FGF_merged_grouped_cdna_annotated.bed.gz
4.37 MB
METTL3_FGF_merged_grouped_cdna_annotated.bedgraph
13.84 MB
Paraclu
METTL3_FGF_merged_grouped_cdna_peaks.bed.gz
228.52 kB
iCount RNA-maps
METTL3_FGF_merged_grouped_cdna.tar.gz
870.31 kB
iCount summary
METTL3_FGF_merged_grouped_cdna_summary_type.tsv
443 B
METTL3_FGF_merged_grouped_cdna_summary_subtype.tsv
1.00 kB
METTL3_FGF_merged_grouped_cdna_summary_gene.tsv
2.38 MB

METTL3_MEKi_merged

iCount summary
METTL3_MEKi_merged_grouped_cdna_summary_type.tsv
435 B
METTL3_MEKi_merged_grouped_cdna_summary_subtype.tsv
1013 B
METTL3_MEKi_merged_grouped_cdna_summary_gene.tsv
2.04 MB
iCount annotate
METTL3_MEKi_merged_grouped_cdna_annotated.bed.gz
2.42 MB
METTL3_MEKi_merged_grouped_cdna_annotated.bedgraph
7.44 MB
Paraclu
METTL3_MEKi_merged_grouped_cdna_peaks.bed.gz
103.65 kB
iCount RNA-maps
METTL3_MEKi_merged_grouped_cdna.tar.gz
639.72 kB
iCount group
METTL3_MEKi_merged_grouped_cdna.bed.gz
1.92 MB
METTL3_MEKi_merged_grouped_reads.bed.gz
2.03 MB
METTL3_MEKi_merged_grouped_cdna.bedgraph
7.44 MB
PEKA
6mer analysis of METTL3_MEKi_merged_grouped_cdna.tar.gz
2.77 MB