STAR
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.bam
2.57 GB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_unmapped.out.mate1.fastq.gz
179.16 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.bam.bai
4.01 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_stats.txt
1.82 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_SJ.out.tab
2.20 MB
FASTQ file (single-end)
iCLIP_Musashi_hES-non-diff__hu_TCNNN_20090724_LUe7_2_fastqc.zip
479.11 kB
iCLIP_Musashi_hES-non-diff__hu_TCNNN_20090724_LUe7_2.fastq.gz
72.60 MB
STAR
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_unmapped.out.mate1.fastq.gz
169.78 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.bam.bai
4.29 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.bam
2.33 GB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_stats.txt
1.82 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_SJ.out.tab
836.73 kB
STAR
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed_unmapped.out.mate1.fastq.gz
7.67 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed.bam.bai
3.54 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed.bam
87.52 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed_stats.txt
1.80 kB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed_SJ.out.tab
60.67 kB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed.bw
28.92 kB
STAR
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_unmapped.out.mate1.fastq.gz
179.16 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.bam.bai
4.02 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.bam
2.57 GB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_stats.txt
1.82 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed_SJ.out.tab
2.20 MB
iCount xlsites
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_skipped.bam
11.09 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.bed.gz
7.88 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_singleAndMulti.bed.gz
14.66 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_reads_single.bed.gz
9.47 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.bedgraph
35.75 MB
PEKA
4mer analysis of iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome.tar.gz
796.48 kB
Paraclu
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_peaks.bed.gz
201.83 kB
iCount summary
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_type.tsv
629 B
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_gene.tsv
2.42 MB
iCount xlsites
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_skipped.bam
13.59 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.bed.gz
27.63 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_singleAndMulti.bed.gz
42.56 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_reads_single.bed.gz
31.70 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.bedgraph
131.52 MB
iCount xlsites
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_skipped.bam
3.08 kB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single.bed.gz
1.49 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_singleAndMulti.bed.gz
2.52 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_reads_single.bed.gz
1.75 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single.bedgraph
6.47 MB
iCount summary
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_type.tsv
634 B
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_gene.tsv
2.89 MB
Upload iCount sample annotation
Hallegger_Musashi_hESdiff__hES-non-diff_hu_TCNNN_20090724_annotation_sheet.xlsx
14.03 kB
Hallegger_Musashi_hESdiff__hES-non-diff_hu_TCNNN_20090724_annotation_sheet.tab.gz
517 B
Paraclu
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_peaks.bed.gz
650.47 kB
iCount xlsites
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_skipped.bam
11.09 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.bed.gz
7.88 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_singleAndMulti.bed.gz
14.66 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_reads_single.bed.gz
9.47 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.bedgraph
35.75 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
392 B
iCount summary
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single_summary_type.tsv
606 B
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single_summary_subtype.tsv
1008 B
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single_summary_gene.tsv
1.63 MB
iCount RNA-maps
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single.tar.gz
569.11 kB
PEKA
4mer analysis of iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome.tar.gz
687.18 kB
Paraclu
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome_single_peaks.bed.gz
951 B
iCount RNA-maps
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.tar.gz
1.31 MB
Paraclu
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_peaks.bed.gz
201.83 kB
iCount summary
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_type.tsv
628 B
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single_summary_gene.tsv
2.42 MB
FASTQ file (CLIP)
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3.fastq.gz
1.83 GB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_fastqc.zip
413.07 kB
PEKA
4mer analysis of iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_mapped_to_genome.tar.gz
174 B
FASTQ file (CLIP)
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2.fastq.gz
2.14 GB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_fastqc.zip
415.69 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
225 B
FASTQ file (CLIP)
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1.fastq.gz
1.78 GB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_fastqc.zip
406.14 kB
iCount xlsites
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_skipped.bam
8.77 kB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single.bed.gz
11.87 MB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_singleAndMulti.bed.gz
21.55 MB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_reads_single.bed.gz
14.22 MB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single.bedgraph
54.44 MB
iCount summary
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single_summary_type.tsv
633 B
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single_summary_gene.tsv
2.67 MB
Cutadapt (single-end)
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.fastq.gz
1.85 GB
iCount RNA-maps
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single.tar.gz
1.63 MB
Paraclu
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome_single_peaks.bed.gz
275.04 kB
FASTQ file (CLIP)
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2.fastq.gz
69.10 MB
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_fastqc.zip
353.29 kB
Cutadapt (single-end)
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed.fastq.gz
2.17 GB
iCount xlsites
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_skipped.bam
13.59 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.bed.gz
27.63 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_singleAndMulti.bed.gz
42.56 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_reads_single.bed.gz
31.70 MB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.bedgraph
131.52 MB
Cutadapt (single-end)
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.fastq.gz
1.81 GB
FASTQ file (single-end)
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNGGCGNNN_20160613_Manoj_3.fastq.gz
2.19 GB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNGGCGNNN_20160613_Manoj_3_fastqc.zip
514.63 kB
FASTQ file (single-end)
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNTTGTNNN_20160613_Manoj_1.fastq.gz
2.14 GB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNTTGTNNN_20160613_Manoj_1_fastqc.zip
497.81 kB
iCount summary
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_type.tsv
637 B
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_summary_gene.tsv
2.89 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
376 B
Paraclu
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single_peaks.bed.gz
650.47 kB
PEKA
4mer analysis of iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome.tar.gz
681.88 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
376 B
iCount RNA-maps
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.tar.gz
2.47 MB
PEKA
4mer analysis of iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_mapped_to_genome.tar.gz
742.82 kB
PEKA
4mer analysis of iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome.tar.gz
793.75 kB
Cutadapt (single-end)
iclip-musashi-hes-non-diff-hu-tcnnn-20090724-lue7-2_trimmed.fastq.gz
69.97 MB
FASTQ file (CLIP)
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1.fastq.gz
1.78 GB
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_fastqc.zip
406.14 kB
STAR
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_unmapped.out.mate1.fastq.gz
169.78 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.bam.bai
4.30 MB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.bam
2.33 GB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_stats.txt
1.82 kB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed_SJ.out.tab
836.73 kB
iCount RNA-maps
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_mapped_to_genome_single.tar.gz
2.47 MB
FASTQ file (CLIP)
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3.fastq.gz
1.83 GB
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_fastqc.zip
413.07 kB
iCount RNA-maps
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_mapped_to_genome_single.tar.gz
1.31 MB
Upload iCount sample annotation
Hallegger_Musashi_K562_annotation_sheet.xlsx
222.32 kB
Hallegger_Musashi_K562_annotation_sheet.tab.gz
535 B
Cutadapt (single-end)
iclip-msi2-flag-k562-wt-hs-nnnttgtnnn-20160613-manoj-1_trimmed.fastq.gz
1.81 GB
FASTQ file (single-end)
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNCAATNNN_20160613_Manoj_2.fastq.gz
2.63 GB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNGGCGNNN_20160613_Manoj_3.fastq.gz
2.19 GB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNTTGTNNN_20160613_Manoj_1.fastq.gz
2.14 GB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNCAATNNN_20160613_Manoj_2_fastqc.zip
518.26 kB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNGGCGNNN_20160613_Manoj_3_fastqc.zip
514.63 kB
iCLIP_MSI2-FLAG_K562_Wt_Hs_NNNTTGTNNN_20160613_Manoj_1_fastqc.zip
497.81 kB
STAR
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed_unmapped.out.mate1.fastq.gz
226.99 MB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed.bam.bai
4.11 MB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed.bam
2.91 GB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed_stats.txt
1.82 kB
iclip-msi2-flag-k562-wt-hs-nnncaatnnn-20160613-manoj-2_trimmed_SJ.out.tab
1.26 MB
Cutadapt (single-end)
iclip-msi2-flag-k562-wt-hs-nnnggcgnnn-20160613-manoj-3_trimmed.fastq.gz
1.85 GB
Upload iCount sample annotation
hallegger UN2107_MH_annotation_sheet.xlsx
222.54 kB
hallegger UN2107_MH_annotation_sheet.tab.gz
1.73 kB
FASTQ file (single-end)
FAR3954A1-A25_S125_L005_R1_001.fastq.gz
17.31 GB
FAR3954A1-A25_S125_L005_R1_001_fastqc.zip
528.56 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
1.14 kB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
3.18 GB
demux_nomatch_fastqc.zip
520.54 kB
Musashi
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