STAU1 polysome profiling

E95_STAU1_KD_80S.2

BBDuk (single-end)

E95_STAU1_KD_80S.2_preprocessed.fastq.gz

670.82 kB

E95_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

STAR

E95_STAU1_KD_80S.2_preprocessed_SJ.out.tab

684 B

E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

605.42 kB

E95_STAU1_KD_80S.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_80S.2_preprocessed.bam

137.88 kB

E95_STAU1_KD_80S.2_preprocessed.bam.bai

1.44 MB

E95_STAU1_KD_80S.2_preprocessed.bw

39.29 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

160.82 kB

E95_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.42 kB

E95_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

410.45 kB

E95_STAU1_KD_80S.2_preprocessed_rc.tab.gz

160.72 kB

BBDuk (single-end)

E95_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

E95_STAU1_KD_80S.2_preprocessed.fastq.gz

670.69 kB

FASTQ file (single-end)

E95_STAU1_KD_80S.2_fastqc.zip

536.28 kB

E95_STAU1_KD_80S.2.fastq.gz

42.24 MB

fastqc

Directory

stderr.txt

1.01 kB

STAR

E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

605.46 kB

E95_STAU1_KD_80S.2_preprocessed.bam.bai

1.44 MB

E95_STAU1_KD_80S.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_80S.2_preprocessed_SJ.out.tab

513 B

E95_STAU1_KD_80S.2_preprocessed.bw

38.89 kB

E95_STAU1_KD_80S.2_preprocessed.bam

137.90 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.10 kB

E95_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.19 kB

E95_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.09 kB

E95_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.81 kB

E95_STAU1_KD_P1-P3.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1_statistics.txt.gz

384 B

E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

123.93 MB

STAR

E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

1.63 MB

E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

208.98 kB

E95_STAU1_KD_P1-P3.1_preprocessed.bam

131.72 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bw

1.28 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai

2.32 MB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

182.30 kB

E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.41 kB

E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

220.69 kB

E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

479.01 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1_statistics.txt.gz

384 B

E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

123.93 MB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1.fastq.gz

142.14 MB

stderr.txt

1.05 kB

E95_STAU1_KD_P1-P3.1_fastqc.zip

491.57 kB

STAR

E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai

2.33 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bam

131.85 MB

E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

1.50 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bw

1.28 MB

E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

209.78 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

182.68 kB

E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

479.29 kB

E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

221.02 kB

E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.79 kB

E95_STAU1_KD_80S.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_80S.1_statistics.txt.gz

292 B

E95_STAU1_KD_80S.1_preprocessed.fastq.gz

37.37 MB

STAR

E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

508.33 kB

E95_STAU1_KD_80S.1_preprocessed.bam.bai

1.90 MB

E95_STAU1_KD_80S.1_preprocessed.bam

46.03 MB

E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab

88.08 kB

E95_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_80S.1_preprocessed.bw

486.99 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

196.14 kB

E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.17 kB

E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

446.39 kB

E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.28 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_80S.1_preprocessed.fastq.gz

37.38 MB

E95_STAU1_KD_80S.1_statistics.txt.gz

292 B

FASTQ file (single-end)

E95_STAU1_KD_80S.1_fastqc.zip

495.52 kB

stderr.txt

1.01 kB

fastqc

Directory

E95_STAU1_KD_80S.1.fastq.gz

43.99 MB

STAR

E95_STAU1_KD_80S.1_preprocessed.bam.bai

1.90 MB

E95_STAU1_KD_80S.1_preprocessed.bam

46.09 MB

E95_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

458.84 kB

E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab

88.12 kB

E95_STAU1_KD_80S.1_preprocessed.bw

482.79 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.69 kB

E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

196.86 kB

E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

446.83 kB

E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.58 kB

E95_STAU1_rescue_tot.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

STAR

E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

181.43 kB

E95_STAU1_rescue_tot.1_preprocessed.bam

126.30 MB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.66 MB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

219.73 kB

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.41 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

477.74 kB

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.30 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.80 kB

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.69 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

478.44 kB

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

220.22 kB

BBDuk (single-end)

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_fastqc.zip

492.62 kB

E95_STAU1_rescue_tot.1.fastq.gz

119.27 MB

stderr.txt

1.09 kB

STAR

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

180.93 kB

E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

E95_STAU1_rescue_tot.1_preprocessed.bam

126.35 MB

E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

STAR

E95_STAU1_rescue_tot.1_preprocessed.bam

126.34 MB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

180.93 kB

E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.69 kB

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

220.22 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

478.44 kB

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.80 kB

E95_STAU1_KD_P4-P8.1

BBDuk (single-end)

E95_STAU1_KD_P4-P8.1_statistics.txt.gz

338 B

E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

53.42 MB

fastqc

Directory

STAR

E95_STAU1_KD_P4-P8.1_preprocessed.bam

57.41 MB

E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

124.73 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.09 MB

E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bw

900.32 kB

E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

972.36 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

178.37 kB

E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

178.48 kB

E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

465.18 kB

E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

210.92 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.1_statistics.txt.gz

338 B

E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

53.41 MB

STAR

E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.09 MB

E95_STAU1_KD_P4-P8.1_preprocessed.bw

900.15 kB

E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

126.43 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bam

57.43 MB

E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

927.20 kB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.1.fastq.gz

62.32 MB

E95_STAU1_KD_P4-P8.1_fastqc.zip

490.08 kB

stderr.txt

1.05 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

178.81 kB

E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

211.47 kB

E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

178.92 kB

E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

466.27 kB

E96_STAU1_rescue_P4-P8.1

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

114.18 MB

E96_STAU1_rescue_P4-P8.1_statistics.txt.gz

397 B

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

479.73 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

221.12 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

181.90 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

181.79 kB

FASTQ file (single-end)

E96_STAU1_rescue_P4-P8.1.fastq.gz

138.71 MB

E96_STAU1_rescue_P4-P8.1_fastqc.zip

484.66 kB

fastqc

Directory

stderr.txt

1.13 kB

STAR

E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.96 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.34 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam

120.33 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

135.85 kB

BBDuk (single-end)

E96_STAU1_rescue_P4-P8.1_statistics.txt.gz

397 B

fastqc

Directory

E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

114.20 MB

STAR

E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.96 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

135.85 kB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.34 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam

120.32 MB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

181.79 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

221.12 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

181.90 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

479.73 kB

E95_STAU1_KD_tot.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.1_preprocessed.fastq.gz

67.34 MB

E95_STAU1_KD_tot.1_statistics.txt.gz

354 B

STAR

E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.06 MB

E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab

136.15 kB

E95_STAU1_KD_tot.1_preprocessed.bam

77.92 MB

E95_STAU1_KD_tot.1_preprocessed.bam.bai

2.27 MB

E95_STAU1_KD_tot.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_tot.1_preprocessed.bw

1.09 MB

HTSeq-count (CPM)

E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

213.89 kB

E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

180.36 kB

E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

469.58 kB

E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz

180.25 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.1_statistics.txt.gz

354 B

E95_STAU1_KD_tot.1_preprocessed.fastq.gz

67.34 MB

STAR

E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab

136.64 kB

E95_STAU1_KD_tot.1_preprocessed.bw

1.09 MB

E95_STAU1_KD_tot.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_tot.1_preprocessed.bam.bai

2.27 MB

E95_STAU1_KD_tot.1_preprocessed.bam

77.91 MB

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E95_STAU1_KD_tot.1_fastqc.zip

491.87 kB

E95_STAU1_KD_tot.1.fastq.gz

78.92 MB

HTSeq-count (CPM)

E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

180.70 kB

E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

214.24 kB

E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

470.17 kB

E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz

180.59 kB

E95_STAU1_KD_P1-P3.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.2_statistics.txt.gz

252 B

E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

1.82 MB

STAR

E95_STAU1_KD_P1-P3.2_preprocessed.bw

59.73 kB

E95_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

1.32 kB

E95_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.50 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bam

346.28 kB

E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.71 kB

E95_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

160.90 kB

E95_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

410.90 kB

E95_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

160.80 kB

BBDuk (single-end)

E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

1.82 MB

E95_STAU1_KD_P1-P3.2_statistics.txt.gz

252 B

fastqc

Directory

STAR

E95_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

1.32 kB

E95_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.50 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bw

59.75 kB

E95_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bam

346.77 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E95_STAU1_KD_P1-P3.2.fastq.gz

127.03 MB

E95_STAU1_KD_P1-P3.2_fastqc.zip

542.79 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

169.05 kB

E95_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.50 kB

E95_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.16 kB

E95_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.26 kB

E95_STAU1_KD_tot.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.2_preprocessed.fastq.gz

1.23 MB

E95_STAU1_KD_tot.2_statistics.txt.gz

221 B

STAR

E95_STAU1_KD_tot.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

E95_STAU1_KD_tot.2_preprocessed.bam

242.73 kB

E95_STAU1_KD_tot.2_preprocessed.bw

53.26 kB

E95_STAU1_KD_tot.2_preprocessed_SJ.out.tab

338 B

E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.13 MB

HTSeq-count (CPM)

E95_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

160.85 kB

E95_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

410.65 kB

E95_STAU1_KD_tot.2_preprocessed_rc.tab.gz

160.75 kB

E95_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

168.54 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.2_statistics.txt.gz

221 B

E95_STAU1_KD_tot.2_preprocessed.fastq.gz

1.23 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.01 kB

E95_STAU1_KD_tot.2_fastqc.zip

545.13 kB

E95_STAU1_KD_tot.2.fastq.gz

71.73 MB

STAR

E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.13 MB

E95_STAU1_KD_tot.2_preprocessed_SJ.out.tab

439 B

E95_STAU1_KD_tot.2_preprocessed.bam.bai

1.48 MB

E95_STAU1_KD_tot.2_preprocessed.bam

234.83 kB

E95_STAU1_KD_tot.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_tot.2_preprocessed.bw

52.18 kB

HTSeq-count (CPM)

E95_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

168.94 kB

E95_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.31 kB

E95_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.12 kB

E95_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.22 kB

E95_STAU1_rescue_P1-P3.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

2.20 MB

E95_STAU1_rescue_P1-P3.2_statistics.txt.gz

266 B

STAR

E95_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.51 MB

E95_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.02 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam

544.89 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bw

68.29 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.89 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

168.85 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.05 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

160.87 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

160.96 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.2_statistics.txt.gz

266 B

E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

2.19 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P1-P3.2_fastqc.zip

542.25 kB

E95_STAU1_rescue_P1-P3.2.fastq.gz

180.22 MB

STAR

E95_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bw

67.41 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.89 MB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.51 MB

E95_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

1.91 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam

544.15 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.64 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.33 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.23 kB

E96_STAU1_KD_P1-P3.1

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.1_statistics.txt.gz

329 B

E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

33.74 MB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

175.43 kB

E96_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

175.54 kB

E96_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

454.88 kB

E96_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

203.21 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

33.74 MB

E96_STAU1_KD_P1-P3.1_statistics.txt.gz

329 B

STAR

E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

100.67 kB

E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

364.26 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bw

591.52 kB

E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai

1.90 MB

E96_STAU1_KD_P1-P3.1_preprocessed.bam

35.35 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P1-P3.1.fastq.gz

38.30 MB

E96_STAU1_KD_P1-P3.1_fastqc.zip

483.97 kB

STAR

E96_STAU1_KD_P1-P3.1_preprocessed.bam

35.35 MB

E96_STAU1_KD_P1-P3.1_preprocessed.bw

591.52 kB

E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

364.17 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai

1.90 MB

E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

100.67 kB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

203.21 kB

E96_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

454.88 kB

E96_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

175.54 kB

E96_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

175.43 kB

E95_STAU1_KD_P4-P8.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.97 MB

E95_STAU1_KD_P4-P8.2_statistics.txt.gz

263 B

STAR

E95_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.06 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bw

76.68 kB

E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.82 MB

E95_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam

379.10 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.54 MB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

160.79 kB

E95_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

410.77 kB

E95_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

160.90 kB

E95_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

168.67 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.97 MB

E95_STAU1_KD_P4-P8.2_statistics.txt.gz

263 B

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2.fastq.gz

56.47 MB

stderr.txt

1.05 kB

E95_STAU1_KD_P4-P8.2_fastqc.zip

537.86 kB

STAR

E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.82 MB

E95_STAU1_KD_P4-P8.2_preprocessed.bw

76.95 kB

E95_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.30 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.54 MB

E95_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam

372.09 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

E95_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.39 kB

E95_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.02 kB

E95_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E95_STAU1_rescue_80S.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_80S.1_preprocessed.fastq.gz

49.06 MB

E95_STAU1_rescue_80S.1_statistics.txt.gz

311 B

STAR

E95_STAU1_rescue_80S.1_preprocessed.bw

542.15 kB

E95_STAU1_rescue_80S.1_preprocessed.bam.bai

1.96 MB

E95_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

712.89 kB

E95_STAU1_rescue_80S.1_preprocessed.bam

61.28 MB

E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

90.01 kB

HTSeq-count (CPM)

E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.52 kB

E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.42 kB

E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

196.59 kB

E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

445.91 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_80S.1_preprocessed.fastq.gz

49.05 MB

E95_STAU1_rescue_80S.1_statistics.txt.gz

311 B

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.09 kB

E95_STAU1_rescue_80S.1_fastqc.zip

495.84 kB

E95_STAU1_rescue_80S.1.fastq.gz

58.35 MB

STAR

E95_STAU1_rescue_80S.1_preprocessed.bam

61.41 MB

E95_STAU1_rescue_80S.1_preprocessed.bam.bai

1.96 MB

E95_STAU1_rescue_80S.1_preprocessed.bw

538.25 kB

E95_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

626.48 kB

E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

90.76 kB

E95_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

HTSeq-count (CPM)

E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.89 kB

E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.15 kB

E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.17 kB

E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

173.00 kB

E95_STAU1_rescue_P4-P8.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.91 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

945 B

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bw

46.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

214.39 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

160.88 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

160.78 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

410.82 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.70 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.96 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.31 kB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

845 B

E95_STAU1_rescue_P4-P8.2_preprocessed.bw

45.69 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.46 MB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

215.23 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P4-P8.2.fastq.gz

75.84 MB

E95_STAU1_rescue_P4-P8.2_fastqc.zip

539.53 kB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

215.23 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

845 B

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bw

45.69 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.27 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.46 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.31 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.96 kB

E95_STAU1_rescue_tot.2

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

976.03 kB

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

STAR

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

836.15 kB

E95_STAU1_rescue_tot.2_preprocessed.bam

287.97 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.14 kB

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.16 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

168.68 kB

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

410.88 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

160.92 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

160.81 kB

BBDuk (single-end)

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

975.76 kB

fastqc

Directory

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.47 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.18 kB

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

BBDuk (single-end)

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

fastqc

Directory

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

975.99 kB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.2_fastqc.zip

539.33 kB

stderr.txt

1.09 kB

E95_STAU1_rescue_tot.2.fastq.gz

108.64 MB

STAR

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.84 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bam

291.54 kB

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

834.92 kB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.30 kB

STAR

E95_STAU1_rescue_tot.2_preprocessed.bam

291.54 kB

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

834.95 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.84 kB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.30 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.18 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.47 kB

E95_STAU1_rescue_P1-P3.1

BBDuk (single-end)

E95_STAU1_rescue_P1-P3.1_statistics.txt.gz

404 B

fastqc

Directory

E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

169.18 MB

STAR

E95_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.25 MB

E95_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

246.72 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_P1-P3.1_preprocessed.bw

1.46 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam

178.63 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.47 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

485.09 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

225.79 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

183.77 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

183.66 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.1_statistics.txt.gz

404 B

E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

169.18 MB

FASTQ file (single-end)

E95_STAU1_rescue_P1-P3.1.fastq.gz

197.55 MB

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P1-P3.1_fastqc.zip

484.06 kB

STAR

E95_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

248.21 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.14 MB

E95_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_P1-P3.1_preprocessed.bw

1.45 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.46 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam

178.66 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

485.38 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

184.11 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

184.23 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

225.95 kB

E95_STAU1_rescue_P4-P8.1

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.38 MB

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.12 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

133.56 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.14 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

960.00 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.39 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

469.82 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.51 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

213.95 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.40 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.81 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

214.18 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

470.48 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.92 kB

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.10 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.13 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

963.66 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

133.81 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.38 MB

FASTQ file (single-end)

stderr.txt

1.13 kB

fastqc

Directory

E95_STAU1_rescue_P4-P8.1.fastq.gz

83.12 MB

E95_STAU1_rescue_P4-P8.1_fastqc.zip

478.88 kB

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

963.66 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

133.81 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.11 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.13 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

214.18 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

470.48 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.92 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.81 kB

E96_STAU1_KD_80S.2

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_80S.2_preprocessed.fastq.gz

1.05 MB

E96_STAU1_KD_80S.2_statistics.txt.gz

236 B

HTSeq-count (CPM)

E96_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.01 kB

E96_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.18 kB

E96_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.70 kB

E96_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.08 kB

BBDuk (single-end)

E96_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

E96_STAU1_KD_80S.2_preprocessed.fastq.gz

1.05 MB

FASTQ file (single-end)

E96_STAU1_KD_80S.2.fastq.gz

50.53 MB

fastqc

Directory

stderr.txt

1.01 kB

E96_STAU1_KD_80S.2_fastqc.zip

547.85 kB

STAR

E96_STAU1_KD_80S.2_preprocessed.bam

242.14 kB

E96_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

959.42 kB

E96_STAU1_KD_80S.2_preprocessed_SJ.out.tab

813 B

E96_STAU1_KD_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_80S.2_preprocessed.bam.bai

1.47 MB

E96_STAU1_KD_80S.2_preprocessed.bw

49.58 kB

STAR

E96_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

959.32 kB

E96_STAU1_KD_80S.2_preprocessed.bam.bai

1.47 MB

E96_STAU1_KD_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_80S.2_preprocessed.bam

242.14 kB

E96_STAU1_KD_80S.2_preprocessed_SJ.out.tab

813 B

E96_STAU1_KD_80S.2_preprocessed.bw

49.58 kB

HTSeq-count (CPM)

E96_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.70 kB

E96_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.18 kB

E96_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.01 kB

E96_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.08 kB

E96_STAU1_KD_P1-P3.2

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

708.25 kB

E96_STAU1_KD_P1-P3.2_statistics.txt.gz

227 B

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.86 kB

E96_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.10 kB

E96_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.16 kB

STAR

E96_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

808 B

E96_STAU1_KD_P1-P3.2_preprocessed.bw

41.33 kB

E96_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.45 MB

E96_STAU1_KD_P1-P3.2_preprocessed.bam

146.03 kB

E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

638.87 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.2_statistics.txt.gz

227 B

E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

708.34 kB

FASTQ file (single-end)

E96_STAU1_KD_P1-P3.2_fastqc.zip

539.33 kB

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P1-P3.2.fastq.gz

35.05 MB

STAR

E96_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

808 B

E96_STAU1_KD_P1-P3.2_preprocessed.bam

146.03 kB

E96_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

638.88 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bw

41.33 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.45 MB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.86 kB

E96_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.10 kB

E96_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.16 kB

E96_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_KD_80S.1

HTSeq-count (CPM)

E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

195.96 kB

E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

445.89 kB

E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.92 kB

E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.82 kB

BBDuk (single-end)

E96_STAU1_KD_80S.1_statistics.txt.gz

342 B

fastqc

Directory

E96_STAU1_KD_80S.1_preprocessed.fastq.gz

43.91 MB

HTSeq-count (CPM)

E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.82 kB

E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

445.89 kB

E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

195.96 kB

E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.92 kB

BBDuk (single-end)

E96_STAU1_KD_80S.1_preprocessed.fastq.gz

43.91 MB

fastqc

Directory

E96_STAU1_KD_80S.1_statistics.txt.gz

342 B

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.01 kB

E96_STAU1_KD_80S.1.fastq.gz

50.85 MB

E96_STAU1_KD_80S.1_fastqc.zip

488.86 kB

STAR

E96_STAU1_KD_80S.1_preprocessed.bw

527.26 kB

E96_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

500.28 kB

E96_STAU1_KD_80S.1_preprocessed_SJ.out.tab

86.72 kB

E96_STAU1_KD_80S.1_preprocessed.bam

52.88 MB

E96_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_80S.1_preprocessed.bam.bai

1.94 MB

STAR

E96_STAU1_KD_80S.1_preprocessed_SJ.out.tab

86.72 kB

E96_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

500.32 kB

E96_STAU1_KD_80S.1_preprocessed.bam.bai

1.94 MB

E96_STAU1_KD_80S.1_preprocessed.bam

52.88 MB

E96_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_80S.1_preprocessed.bw

527.26 kB

No Sample

FASTQ file (single-end)

E96_STAU1_rescue_80S.2.fastq.gz

70.14 MB

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_80S.2_fastqc.zip

538.57 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

182.87 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.98 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

480.74 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

222.41 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.57 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

479.73 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

221.12 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

181.90 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

181.79 kB

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.2_fastqc.zip

533.53 kB

stderr.txt

1.09 kB

E96_STAU1_rescue_tot.2.fastq.gz

104.50 MB

FASTQ file (single-end)

E96_STAU1_rescue_tot.1.fastq.gz

110.12 MB

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_tot.1_fastqc.zip

495.13 kB

DESeq2

de_file.tab.gz

288.64 kB

count_matrix.tab.gz

64.15 kB

diffexp_deseq2.tab.gz

439.54 kB

Gene set

DeSeq2_tot_DESeq2_logFC1.0_FDR0.05_all.tab.gz

28.21 kB

FASTQ file (single-end)

E96_STAU1_rescue_P4-P8.1.fastq.gz

138.71 MB

E96_STAU1_rescue_P4-P8.1_fastqc.zip

484.66 kB

fastqc

Directory

stderr.txt

1.13 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E96_STAU1_rescue_P4-P8.2_fastqc.zip

545.45 kB

E96_STAU1_rescue_P4-P8.2.fastq.gz

127.51 MB

STAR

E96_STAU1_rescue_80S.2_preprocessed.bw

39.89 kB

E96_STAU1_rescue_80S.2_preprocessed_SJ.out.tab

884 B

E96_STAU1_rescue_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

547.05 kB

E96_STAU1_rescue_80S.2_preprocessed.bam

233.79 kB

E96_STAU1_rescue_80S.2_preprocessed.bam.bai

1.45 MB

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2.fastq.gz

107.47 MB

E96_STAU1_KD_P4-P8.2_fastqc.zip

537.74 kB

stderr.txt

1.05 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P4-P8.1_fastqc.zip

480.63 kB

E96_STAU1_KD_P4-P8.1.fastq.gz

119.94 MB

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E96_STAU1_KD_tot.1.fastq.gz

110.93 MB

E96_STAU1_KD_tot.1_fastqc.zip

485.67 kB

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E96_STAU1_KD_tot.2_fastqc.zip

543.20 kB

E96_STAU1_KD_tot.2.fastq.gz

101.76 MB

BBDuk (single-end)

E95_STAU1_KD_80S.2_preprocessed.fastq.gz

670.82 kB

E95_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.2_statistics.txt.gz

252 B

E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

1.82 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_80S.1_statistics.txt.gz

292 B

E95_STAU1_KD_80S.1_preprocessed.fastq.gz

37.37 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.97 MB

E95_STAU1_KD_P4-P8.2_statistics.txt.gz

263 B

FASTQ file (single-end)

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_80S.1.fastq.gz

67.42 MB

E96_STAU1_rescue_80S.1_fastqc.zip

498.28 kB

BBDuk (single-end)

E95_STAU1_KD_P4-P8.1_statistics.txt.gz

338 B

E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

53.42 MB

fastqc

Directory

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.1.fastq.gz

180.96 MB

E96_STAU1_rescue_P1-P3.1_fastqc.zip

490.69 kB

stderr.txt

1.13 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1_statistics.txt.gz

384 B

E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

123.93 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E96_STAU1_rescue_P1-P3.2.fastq.gz

171.20 MB

E96_STAU1_rescue_P1-P3.2_fastqc.zip

538.18 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.2_preprocessed.fastq.gz

1.23 MB

E95_STAU1_KD_tot.2_statistics.txt.gz

221 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

2.20 MB

E95_STAU1_rescue_P1-P3.2_statistics.txt.gz

266 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.1_preprocessed.fastq.gz

67.34 MB

E95_STAU1_KD_tot.1_statistics.txt.gz

354 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_80S.1_preprocessed.fastq.gz

49.06 MB

E95_STAU1_rescue_80S.1_statistics.txt.gz

311 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.38 MB

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

BBDuk (single-end)

E95_STAU1_rescue_P1-P3.1_statistics.txt.gz

404 B

fastqc

Directory

E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

169.18 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

976.03 kB

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

STAR

E95_STAU1_KD_80S.2_preprocessed_SJ.out.tab

684 B

E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

605.42 kB

E95_STAU1_KD_80S.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_80S.2_preprocessed.bam

137.88 kB

E95_STAU1_KD_80S.2_preprocessed.bam.bai

1.44 MB

E95_STAU1_KD_80S.2_preprocessed.bw

39.29 kB

STAR

E95_STAU1_KD_P1-P3.2_preprocessed.bw

59.73 kB

E95_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

1.32 kB

E95_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.50 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bam

346.28 kB

E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

STAR

E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

508.33 kB

E95_STAU1_KD_80S.1_preprocessed.bam.bai

1.90 MB

E95_STAU1_KD_80S.1_preprocessed.bam

46.03 MB

E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab

88.08 kB

E95_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_80S.1_preprocessed.bw

486.99 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

STAR

E95_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.06 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bw

76.68 kB

E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.82 MB

E95_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam

379.10 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.54 MB

STAR

E95_STAU1_KD_P4-P8.1_preprocessed.bam

57.41 MB

E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

124.73 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.09 MB

E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bw

900.32 kB

E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

972.36 kB

STAR

E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

1.63 MB

E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

208.98 kB

E95_STAU1_KD_P1-P3.1_preprocessed.bam

131.72 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bw

1.28 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai

2.32 MB

STAR

E95_STAU1_KD_tot.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

E95_STAU1_KD_tot.2_preprocessed.bam

242.73 kB

E95_STAU1_KD_tot.2_preprocessed.bw

53.26 kB

E95_STAU1_KD_tot.2_preprocessed_SJ.out.tab

338 B

E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.13 MB

STAR

E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.06 MB

E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab

136.15 kB

E95_STAU1_KD_tot.1_preprocessed.bam

77.92 MB

E95_STAU1_KD_tot.1_preprocessed.bam.bai

2.27 MB

E95_STAU1_KD_tot.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_tot.1_preprocessed.bw

1.09 MB

STAR

E95_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.51 MB

E95_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.02 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam

544.89 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bw

68.29 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.89 MB

STAR

E96_STAU1_rescue_tot.2_preprocessed.bam

373.87 kB

E96_STAU1_rescue_tot.2_preprocessed.bw

46.31 kB

E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

639.39 kB

E96_STAU1_rescue_tot.2_preprocessed.bam.bai

1.46 MB

E96_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.89 kB

E96_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

STAR

E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

66.50 kB

E96_STAU1_rescue_80S.1_preprocessed.bw

532.51 kB

E96_STAU1_rescue_80S.1_preprocessed.bam

69.22 MB

E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

669.30 kB

E96_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_80S.1_preprocessed.bam.bai

2.01 MB

STAR

E95_STAU1_rescue_80S.1_preprocessed.bw

542.15 kB

E95_STAU1_rescue_80S.1_preprocessed.bam.bai

1.96 MB

E95_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

712.89 kB

E95_STAU1_rescue_80S.1_preprocessed.bam

61.28 MB

E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

90.01 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

708.25 kB

E96_STAU1_KD_P1-P3.2_statistics.txt.gz

227 B

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.12 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

133.56 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.14 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

960.00 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.39 MB

STAR

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

836.15 kB

E95_STAU1_rescue_tot.2_preprocessed.bam

287.97 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.14 kB

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.16 kB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.91 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

945 B

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bw

46.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

214.39 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

STAR

E95_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.25 MB

E95_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

246.72 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_P1-P3.1_preprocessed.bw

1.46 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam

178.63 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.47 MB

STAR

E96_STAU1_rescue_P1-P3.1_preprocessed.bw

1.31 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam

161.35 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

168.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.50 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.29 MB

STAR

E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

181.43 kB

E95_STAU1_rescue_tot.1_preprocessed.bam

126.30 MB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.66 MB

HTSeq-count (CPM)

E95_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

160.82 kB

E95_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.42 kB

E95_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

410.45 kB

E95_STAU1_KD_80S.2_preprocessed_rc.tab.gz

160.72 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.71 kB

E95_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

160.90 kB

E95_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

410.90 kB

E95_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

160.80 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

196.14 kB

E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.17 kB

E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

446.39 kB

E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.28 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

160.79 kB

E95_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

410.77 kB

E95_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

160.90 kB

E95_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

168.67 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

178.37 kB

E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

178.48 kB

E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

465.18 kB

E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

210.92 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

182.30 kB

E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.41 kB

E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

220.69 kB

E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

479.01 kB

HTSeq-count (CPM)

E95_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

160.85 kB

E95_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

410.65 kB

E95_STAU1_KD_tot.2_preprocessed_rc.tab.gz

160.75 kB

E95_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

168.54 kB

HTSeq-count (CPM)

E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

213.89 kB

E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

180.36 kB

E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

469.58 kB

E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz

180.25 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

168.85 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.05 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

160.87 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

160.96 kB

HTSeq-count (CPM)

E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.52 kB

E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.42 kB

E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

196.59 kB

E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

445.91 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

219.73 kB

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.41 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

477.74 kB

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.30 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

485.09 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

225.79 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

183.77 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

183.66 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

160.88 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

160.78 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

410.82 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.70 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

168.68 kB

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

410.88 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

160.92 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

160.81 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

469.82 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.51 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

213.95 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.40 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.1_statistics.txt.gz

329 B

E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

33.74 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

BBDuk (single-end)

E96_STAU1_KD_80S.1_statistics.txt.gz

342 B

fastqc

Directory

E96_STAU1_KD_80S.1_preprocessed.fastq.gz

43.91 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_80S.2_preprocessed.fastq.gz

1.05 MB

E96_STAU1_KD_80S.2_statistics.txt.gz

236 B

BBDuk (single-end)

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

975.76 kB

fastqc

Directory

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

STAR

E96_STAU1_rescue_tot.1_preprocessed.bam

114.12 MB

E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

128.46 kB

E96_STAU1_rescue_tot.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.52 MB

E96_STAU1_rescue_tot.1_preprocessed.bam.bai

2.35 MB

E96_STAU1_rescue_tot.1_preprocessed_stats.txt

1.80 kB

STAR

E96_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

1.43 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam

284.09 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

756.04 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bw

46.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2_statistics.txt.gz

272 B

E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.47 MB

STAR

E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.96 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.34 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam

120.33 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

135.85 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.2_statistics.txt.gz

258 B

E96_STAU1_KD_tot.2_preprocessed.fastq.gz

1.21 MB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.96 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.31 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.81 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

214.18 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

470.48 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.92 kB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.86 kB

E96_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.10 kB

E96_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.16 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.1_statistics.txt.gz

380 B

E96_STAU1_KD_tot.1_preprocessed.fastq.gz

97.09 MB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

175.43 kB

E96_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

175.54 kB

E96_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

454.88 kB

E96_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

203.21 kB

BBDuk (single-end)

E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

106.02 MB

E96_STAU1_KD_P4-P8.1_statistics.txt.gz

402 B

fastqc

Directory

HTSeq-count (CPM)

E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.82 kB

E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

445.89 kB

E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

195.96 kB

E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.92 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

1.45 MB

E96_STAU1_rescue_P1-P3.2_statistics.txt.gz

250 B

HTSeq-count (CPM)

E96_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.01 kB

E96_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.18 kB

E96_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.70 kB

E96_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.08 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.2_preprocessed.fastq.gz

674.98 kB

E96_STAU1_rescue_80S.2_statistics.txt.gz

223 B

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.48 kB

E96_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.47 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.18 kB

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.80 kB

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.69 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

478.44 kB

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

220.22 kB

BBDuk (single-end)

E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

146.88 MB

fastqc

Directory

E96_STAU1_rescue_P1-P3.1_statistics.txt.gz

405 B

BBDuk (single-end)

E95_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

E95_STAU1_KD_80S.2_preprocessed.fastq.gz

670.69 kB

BBDuk (single-end)

E95_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

1.82 MB

E95_STAU1_KD_P1-P3.2_statistics.txt.gz

252 B

fastqc

Directory

HTSeq-count (CPM)

E96_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.62 kB

E96_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

169.15 kB

E96_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.1_preprocessed.fastq.gz

90.41 MB

E96_STAU1_rescue_tot.1_statistics.txt.gz

376 B

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.1_preprocessed.fastq.gz

54.24 MB

E96_STAU1_rescue_80S.1_statistics.txt.gz

324 B

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.31 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.58 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.21 kB

HTSeq-count (CPM)

E96_STAU1_rescue_80S.2_preprocessed_expressions.txt.gz

411.12 kB

E96_STAU1_rescue_80S.2_preprocessed_rc.tab.gz

161.09 kB

E96_STAU1_rescue_80S.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_rescue_80S.2_preprocessed_cpm.tab.gz

168.80 kB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

182.28 kB

E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

182.17 kB

E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

220.16 kB

E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

478.58 kB

HTSeq-count (CPM)

E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

182.78 kB

E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

477.99 kB

E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz

182.67 kB

E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

220.07 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.40 kB

E96_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.26 kB

E96_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.16 kB

E96_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.2_preprocessed.fastq.gz

818.12 kB

E96_STAU1_rescue_tot.2_statistics.txt.gz

236 B

HTSeq-count (CPM)

E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.78 kB

E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.36 kB

E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.31 kB

E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.67 kB

BBDuk (single-end)

E96_STAU1_rescue_P4-P8.1_statistics.txt.gz

397 B

fastqc

Directory

E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

114.20 MB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.57 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_80S.1_preprocessed.fastq.gz

37.38 MB

E95_STAU1_KD_80S.1_statistics.txt.gz

292 B

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.98 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

182.87 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

222.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

480.74 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

181.50 kB

E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

475.42 kB

E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

218.02 kB

E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

181.38 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

922.15 kB

E96_STAU1_rescue_P4-P8.2_statistics.txt.gz

242 B

STAR

E96_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

808 B

E96_STAU1_KD_P1-P3.2_preprocessed.bw

41.33 kB

E96_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.45 MB

E96_STAU1_KD_P1-P3.2_preprocessed.bam

146.03 kB

E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

638.87 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1_statistics.txt.gz

384 B

E95_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

123.93 MB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

845 B

E95_STAU1_rescue_P4-P8.2_preprocessed.bw

45.69 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.46 MB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

215.23 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.1_statistics.txt.gz

338 B

E95_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

53.41 MB

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.10 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.13 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

963.66 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

133.81 kB

FASTQ file (single-end)

E95_STAU1_KD_80S.2_fastqc.zip

536.28 kB

E95_STAU1_KD_80S.2.fastq.gz

42.24 MB

fastqc

Directory

stderr.txt

1.01 kB

FASTQ file (single-end)

E95_STAU1_KD_80S.1_fastqc.zip

495.52 kB

stderr.txt

1.01 kB

fastqc

Directory

E95_STAU1_KD_80S.1.fastq.gz

43.99 MB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P1-P3.1.fastq.gz

142.14 MB

stderr.txt

1.05 kB

E95_STAU1_KD_P1-P3.1_fastqc.zip

491.57 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.1_statistics.txt.gz

354 B

E95_STAU1_KD_tot.1_preprocessed.fastq.gz

67.34 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.97 MB

E95_STAU1_KD_P4-P8.2_statistics.txt.gz

263 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_KD_tot.2_statistics.txt.gz

221 B

E95_STAU1_KD_tot.2_preprocessed.fastq.gz

1.23 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.1_statistics.txt.gz

404 B

E95_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

169.18 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_80S.1_preprocessed.fastq.gz

49.05 MB

E95_STAU1_rescue_80S.1_statistics.txt.gz

311 B

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P1-P3.2_statistics.txt.gz

266 B

E95_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

2.19 MB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.1_statistics.txt.gz

390 B

E95_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

71.38 MB

STAR

E95_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

605.46 kB

E95_STAU1_KD_80S.2_preprocessed.bam.bai

1.44 MB

E95_STAU1_KD_80S.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_80S.2_preprocessed_SJ.out.tab

513 B

E95_STAU1_KD_80S.2_preprocessed.bw

38.89 kB

E95_STAU1_KD_80S.2_preprocessed.bam

137.90 kB

BBDuk (single-end)

E95_STAU1_rescue_tot.1_statistics.txt.gz

412 B

fastqc

Directory

E95_STAU1_rescue_tot.1_preprocessed.fastq.gz

101.61 MB

STAR

E95_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

1.32 kB

E95_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.50 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bw

59.75 kB

E95_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

E95_STAU1_KD_P1-P3.2_preprocessed.bam

346.77 kB

BBDuk (single-end)

fastqc

Directory

E95_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

1.03 MB

E95_STAU1_rescue_P4-P8.2_statistics.txt.gz

229 B

BBDuk (single-end)

E96_STAU1_KD_80S.1_preprocessed.fastq.gz

43.91 MB

fastqc

Directory

E96_STAU1_KD_80S.1_statistics.txt.gz

342 B

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.2_statistics.txt.gz

227 B

E96_STAU1_KD_P1-P3.2_preprocessed.fastq.gz

708.34 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.1_statistics.txt.gz

402 B

E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

106.02 MB

BBDuk (single-end)

E95_STAU1_rescue_tot.2_statistics.txt.gz

237 B

fastqc

Directory

E95_STAU1_rescue_tot.2_preprocessed.fastq.gz

975.99 kB

STAR

E95_STAU1_KD_80S.1_preprocessed.bam.bai

1.90 MB

E95_STAU1_KD_80S.1_preprocessed.bam

46.09 MB

E95_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

458.84 kB

E95_STAU1_KD_80S.1_preprocessed_SJ.out.tab

88.12 kB

E95_STAU1_KD_80S.1_preprocessed.bw

482.79 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P1-P3.1_preprocessed.fastq.gz

33.74 MB

E96_STAU1_KD_P1-P3.1_statistics.txt.gz

329 B

BBDuk (single-end)

E96_STAU1_KD_80S.2_statistics.txt.gz

236 B

fastqc

Directory

E96_STAU1_KD_80S.2_preprocessed.fastq.gz

1.05 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.1_preprocessed.fastq.gz

97.09 MB

E96_STAU1_KD_tot.1_statistics.txt.gz

380 B

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.2_statistics.txt.gz

258 B

E96_STAU1_KD_tot.2_preprocessed.fastq.gz

1.21 MB

STAR

E95_STAU1_KD_P1-P3.1_preprocessed.bam.bai

2.33 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bam

131.85 MB

E95_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

1.50 MB

E95_STAU1_KD_P1-P3.1_preprocessed.bw

1.28 MB

E95_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

209.78 kB

STAR

E95_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.09 MB

E95_STAU1_KD_P4-P8.1_preprocessed.bw

900.15 kB

E95_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

126.43 kB

E95_STAU1_KD_P4-P8.1_preprocessed.bam

57.43 MB

E95_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

927.20 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.2_statistics.txt.gz

223 B

E96_STAU1_rescue_80S.2_preprocessed.fastq.gz

675.40 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.47 MB

E96_STAU1_KD_P4-P8.2_statistics.txt.gz

272 B

BBDuk (single-end)

E96_STAU1_rescue_P4-P8.1_preprocessed.fastq.gz

114.18 MB

fastqc

Directory

E96_STAU1_rescue_P4-P8.1_statistics.txt.gz

397 B

BBDuk (single-end)

E96_STAU1_rescue_80S.1_statistics.txt.gz

324 B

fastqc

Directory

E96_STAU1_rescue_80S.1_preprocessed.fastq.gz

54.24 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.2_statistics.txt.gz

250 B

E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

1.45 MB

BBDuk (single-end)

E96_STAU1_rescue_tot.2_preprocessed.fastq.gz

817.94 kB

fastqc

Directory

E96_STAU1_rescue_tot.2_statistics.txt.gz

236 B

BBDuk (single-end)

E96_STAU1_rescue_tot.1_preprocessed.fastq.gz

90.41 MB

fastqc

Directory

E96_STAU1_rescue_tot.1_statistics.txt.gz

376 B

STAR

E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

100.67 kB

E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

364.26 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bw

591.52 kB

E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai

1.90 MB

E96_STAU1_KD_P1-P3.1_preprocessed.bam

35.35 MB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.2.fastq.gz

56.47 MB

stderr.txt

1.05 kB

E95_STAU1_KD_P4-P8.2_fastqc.zip

537.86 kB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_KD_P4-P8.1.fastq.gz

62.32 MB

E95_STAU1_KD_P4-P8.1_fastqc.zip

490.08 kB

stderr.txt

1.05 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E95_STAU1_KD_P1-P3.2.fastq.gz

127.03 MB

E95_STAU1_KD_P1-P3.2_fastqc.zip

542.79 kB

STAR

E95_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_KD_tot.1_preprocessed_SJ.out.tab

136.64 kB

E95_STAU1_KD_tot.1_preprocessed.bw

1.09 MB

E95_STAU1_KD_tot.1_preprocessed_stats.txt

1.80 kB

E95_STAU1_KD_tot.1_preprocessed.bam.bai

2.27 MB

E95_STAU1_KD_tot.1_preprocessed.bam

77.91 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.09 kB

E95_STAU1_rescue_80S.1_fastqc.zip

495.84 kB

E95_STAU1_rescue_80S.1.fastq.gz

58.35 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.01 kB

E95_STAU1_KD_tot.2_fastqc.zip

545.13 kB

E95_STAU1_KD_tot.2.fastq.gz

71.73 MB

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E95_STAU1_KD_tot.1_fastqc.zip

491.87 kB

E95_STAU1_KD_tot.1.fastq.gz

78.92 MB

FASTQ file (single-end)

stderr.txt

1.13 kB

fastqc

Directory

E95_STAU1_rescue_P4-P8.1.fastq.gz

83.12 MB

E95_STAU1_rescue_P4-P8.1_fastqc.zip

478.88 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.1_statistics.txt.gz

405 B

E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

146.87 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P1-P3.2_fastqc.zip

542.25 kB

E95_STAU1_rescue_P1-P3.2.fastq.gz

180.22 MB

FASTQ file (single-end)

E95_STAU1_rescue_P1-P3.1.fastq.gz

197.55 MB

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P1-P3.1_fastqc.zip

484.06 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E95_STAU1_rescue_P4-P8.2.fastq.gz

75.84 MB

E95_STAU1_rescue_P4-P8.2_fastqc.zip

539.53 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P4-P8.2_statistics.txt.gz

242 B

E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

922.13 kB

FASTQ file (single-end)

E96_STAU1_KD_P1-P3.2_fastqc.zip

539.33 kB

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P1-P3.2.fastq.gz

35.05 MB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.01 kB

E96_STAU1_KD_80S.1.fastq.gz

50.85 MB

E96_STAU1_KD_80S.1_fastqc.zip

488.86 kB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.1_fastqc.zip

492.62 kB

E95_STAU1_rescue_tot.1.fastq.gz

119.27 MB

stderr.txt

1.09 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P1-P3.1.fastq.gz

38.30 MB

E96_STAU1_KD_P1-P3.1_fastqc.zip

483.97 kB

FASTQ file (single-end)

fastqc

Directory

E95_STAU1_rescue_tot.2_fastqc.zip

539.33 kB

stderr.txt

1.09 kB

E95_STAU1_rescue_tot.2.fastq.gz

108.64 MB

FASTQ file (single-end)

E96_STAU1_KD_80S.2.fastq.gz

50.53 MB

fastqc

Directory

stderr.txt

1.01 kB

E96_STAU1_KD_80S.2_fastqc.zip

547.85 kB

STAR

E95_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.82 MB

E95_STAU1_KD_P4-P8.2_preprocessed.bw

76.95 kB

E95_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.30 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.54 MB

E95_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_KD_P4-P8.2_preprocessed.bam

372.09 kB

STAR

E95_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.13 MB

E95_STAU1_KD_tot.2_preprocessed_SJ.out.tab

439 B

E95_STAU1_KD_tot.2_preprocessed.bam.bai

1.48 MB

E95_STAU1_KD_tot.2_preprocessed.bam

234.83 kB

E95_STAU1_KD_tot.2_preprocessed_stats.txt

1.77 kB

E95_STAU1_KD_tot.2_preprocessed.bw

52.18 kB

STAR

E96_STAU1_KD_80S.1_preprocessed.bw

527.26 kB

E96_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

500.28 kB

E96_STAU1_KD_80S.1_preprocessed_SJ.out.tab

86.72 kB

E96_STAU1_KD_80S.1_preprocessed.bam

52.88 MB

E96_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_80S.1_preprocessed.bam.bai

1.94 MB

STAR

E96_STAU1_KD_80S.2_preprocessed.bam

242.14 kB

E96_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

959.42 kB

E96_STAU1_KD_80S.2_preprocessed_SJ.out.tab

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1.47 MB

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49.58 kB

STAR

E95_STAU1_rescue_80S.1_preprocessed.bam

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E95_STAU1_rescue_80S.1_preprocessed.bam.bai

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E95_STAU1_rescue_80S.1_preprocessed.bw

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E95_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

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E95_STAU1_rescue_80S.1_preprocessed_stats.txt

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STAR

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

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1.64 MB

E95_STAU1_rescue_tot.1_preprocessed.bam

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E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

STAR

E95_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bw

67.41 kB

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1.89 MB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.51 MB

E95_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

1.91 kB

E95_STAU1_rescue_P1-P3.2_preprocessed.bam

544.15 kB

STAR

E95_STAU1_rescue_P4-P8.1_preprocessed.bw

963.66 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

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E95_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam

74.11 MB

E95_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.13 MB

STAR

E95_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

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E95_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

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1.45 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.46 MB

E95_STAU1_rescue_P1-P3.1_preprocessed.bam

178.66 MB

STAR

E95_STAU1_rescue_tot.1_preprocessed.bam

126.34 MB

E95_STAU1_rescue_tot.1_preprocessed.bam.bai

2.38 MB

E95_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.64 MB

E95_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

180.93 kB

E95_STAU1_rescue_tot.1_preprocessed.bw

1.31 MB

E95_STAU1_rescue_tot.1_preprocessed_stats.txt

1.81 kB

STAR

E96_STAU1_KD_80S.1_preprocessed_SJ.out.tab

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E96_STAU1_KD_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

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E96_STAU1_KD_80S.1_preprocessed.bam.bai

1.94 MB

E96_STAU1_KD_80S.1_preprocessed.bam

52.88 MB

E96_STAU1_KD_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_80S.1_preprocessed.bw

527.26 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.10 kB

E95_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.19 kB

E95_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.09 kB

E95_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.81 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

169.05 kB

E95_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.50 kB

E95_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.16 kB

E95_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.26 kB

STAR

E95_STAU1_rescue_P4-P8.2_preprocessed.bam

215.23 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

845 B

E95_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

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45.69 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

932.27 kB

E95_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.46 MB

STAR

E96_STAU1_KD_P1-P3.2_preprocessed_SJ.out.tab

808 B

E96_STAU1_KD_P1-P3.2_preprocessed.bam

146.03 kB

E96_STAU1_KD_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

638.88 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bw

41.33 kB

E96_STAU1_KD_P1-P3.2_preprocessed.bam.bai

1.45 MB

STAR

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.84 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bam

291.54 kB

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

834.92 kB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.30 kB

STAR

E96_STAU1_KD_P4-P8.1_preprocessed.bw

1.04 MB

E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.43 MB

E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

175.87 kB

E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.12 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bam

104.15 MB

STAR

E96_STAU1_KD_P1-P3.1_preprocessed.bam

35.35 MB

E96_STAU1_KD_P1-P3.1_preprocessed.bw

591.52 kB

E96_STAU1_KD_P1-P3.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

364.17 kB

E96_STAU1_KD_P1-P3.1_preprocessed.bam.bai

1.90 MB

E96_STAU1_KD_P1-P3.1_preprocessed_SJ.out.tab

100.67 kB

HTSeq-count (CPM)

E95_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.69 kB

E95_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

196.86 kB

E95_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

446.83 kB

E95_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.58 kB

HTSeq-count (CPM)

E95_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

182.68 kB

E95_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

479.29 kB

E95_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

221.02 kB

E95_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.79 kB

STAR

E96_STAU1_rescue_80S.2_preprocessed.bw

39.89 kB

E96_STAU1_rescue_80S.2_preprocessed.bam

233.80 kB

E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

547.29 kB

E96_STAU1_rescue_80S.2_preprocessed.bam.bai

1.45 MB

E96_STAU1_rescue_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_80S.2_preprocessed_SJ.out.tab

884 B

STAR

E96_STAU1_KD_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

959.32 kB

E96_STAU1_KD_80S.2_preprocessed.bam.bai

1.47 MB

E96_STAU1_KD_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_80S.2_preprocessed.bam

242.14 kB

E96_STAU1_KD_80S.2_preprocessed_SJ.out.tab

813 B

E96_STAU1_KD_80S.2_preprocessed.bw

49.58 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

178.81 kB

E95_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

211.47 kB

E95_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

178.92 kB

E95_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

466.27 kB

STAR

E95_STAU1_rescue_tot.2_preprocessed.bam

291.54 kB

E95_STAU1_rescue_tot.2_preprocessed.bam.bai

1.47 MB

E95_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

834.95 kB

E95_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

E95_STAU1_rescue_tot.2_preprocessed.bw

49.84 kB

E95_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.30 kB

STAR

E96_STAU1_KD_tot.1_preprocessed.bam

110.84 MB

E96_STAU1_KD_tot.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_KD_tot.1_preprocessed.bw

1.18 MB

E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab

171.19 kB

E96_STAU1_KD_tot.1_preprocessed.bam.bai

2.26 MB

E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.36 MB

STAR

E96_STAU1_KD_P4-P8.2_preprocessed.bam

399.57 kB

E96_STAU1_KD_P4-P8.2_preprocessed.bw

61.70 kB

E96_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.49 kB

E96_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.30 MB

E96_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.50 MB

STAR

E96_STAU1_KD_tot.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E96_STAU1_KD_tot.2_preprocessed_SJ.out.tab

708 B

E96_STAU1_KD_tot.2_preprocessed.bw

57.61 kB

E96_STAU1_KD_tot.2_preprocessed.bam

327.36 kB

E96_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

STAR

E96_STAU1_rescue_P1-P3.2_preprocessed.bam

532.70 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.48 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bw

53.29 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.17 MB

STAR

E96_STAU1_rescue_tot.1_preprocessed.bam.bai

2.35 MB

E96_STAU1_rescue_tot.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

128.46 kB

E96_STAU1_rescue_tot.1_preprocessed.bam

114.14 MB

E96_STAU1_rescue_tot.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.52 MB

STAR

E96_STAU1_rescue_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.96 MB

E96_STAU1_rescue_P4-P8.1_preprocessed_SJ.out.tab

135.85 kB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam.bai

2.34 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_P4-P8.1_preprocessed.bam

120.32 MB

STAR

E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.29 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

168.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam

161.40 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.50 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bw

1.31 MB

STAR

E96_STAU1_KD_P4-P8.2_preprocessed.bw

61.70 kB

E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.30 MB

E96_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.50 MB

E96_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P4-P8.2_preprocessed.bam

399.57 kB

E96_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.49 kB

STAR

E96_STAU1_KD_tot.2_preprocessed.bw

57.61 kB

E96_STAU1_KD_tot.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E96_STAU1_KD_tot.2_preprocessed_SJ.out.tab

708 B

E96_STAU1_KD_tot.2_preprocessed.bam

327.36 kB

STAR

E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

639.34 kB

E96_STAU1_rescue_tot.2_preprocessed.bam

373.87 kB

E96_STAU1_rescue_tot.2_preprocessed.bam.bai

1.46 MB

E96_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.89 kB

E96_STAU1_rescue_tot.2_preprocessed.bw

46.31 kB

E96_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

STAR

E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

66.50 kB

E96_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_80S.1_preprocessed.bam.bai

2.01 MB

E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

669.65 kB

E96_STAU1_rescue_80S.1_preprocessed.bw

532.51 kB

E96_STAU1_rescue_80S.1_preprocessed.bam

69.25 MB

STAR

E96_STAU1_rescue_P4-P8.2_preprocessed.bam

284.09 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

756.16 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

1.43 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bw

46.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

E96_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

HTSeq-count (CPM)

E95_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

180.70 kB

E95_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

214.24 kB

E95_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

470.17 kB

E95_STAU1_KD_tot.1_preprocessed_rc.tab.gz

180.59 kB

HTSeq-count (CPM)

E95_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

E95_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.39 kB

E95_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.02 kB

E95_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

HTSeq-count (CPM)

E95_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

168.94 kB

E95_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.31 kB

E95_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.12 kB

E95_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.22 kB

HTSeq-count (CPM)

E95_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.89 kB

E95_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.15 kB

E95_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.17 kB

E95_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

173.00 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.64 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.33 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

E95_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.23 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

214.18 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

470.48 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

179.92 kB

E95_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

179.81 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

485.38 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

184.11 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

184.23 kB

E95_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

225.95 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

182.69 kB

E95_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

220.22 kB

E95_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

478.44 kB

E95_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

182.80 kB

HTSeq-count (CPM)

E95_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.31 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.14 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.24 kB

E95_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

168.96 kB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.2_preprocessed_cpm.tab.gz

168.86 kB

E96_STAU1_KD_P1-P3.2_preprocessed_rc.tab.gz

161.10 kB

E96_STAU1_KD_P1-P3.2_preprocessed_expressions.txt.gz

411.16 kB

E96_STAU1_KD_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

HTSeq-count (CPM)

E96_STAU1_KD_80S.1_preprocessed_cpm.tab.gz

195.96 kB

E96_STAU1_KD_80S.1_preprocessed_expressions.txt.gz

445.89 kB

E96_STAU1_KD_80S.1_preprocessed_HTseq_rc.txt.gz

172.92 kB

E96_STAU1_KD_80S.1_preprocessed_rc.tab.gz

172.82 kB

STAR

E96_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.48 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bw

53.29 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.17 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bam

532.70 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.78 kB

HTSeq-count (CPM)

E95_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E95_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.18 kB

E95_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E95_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.47 kB

HTSeq-count (CPM)

E96_STAU1_KD_P1-P3.1_preprocessed_cpm.tab.gz

203.21 kB

E96_STAU1_KD_P1-P3.1_preprocessed_expressions.txt.gz

454.88 kB

E96_STAU1_KD_P1-P3.1_preprocessed_HTseq_rc.txt.gz

175.54 kB

E96_STAU1_KD_P1-P3.1_preprocessed_rc.tab.gz

175.43 kB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

182.28 kB

E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

220.16 kB

E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

182.17 kB

E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

478.58 kB

HTSeq-count (CPM)

E96_STAU1_KD_80S.2_preprocessed_cpm.tab.gz

168.70 kB

E96_STAU1_KD_80S.2_preprocessed_HTseq_rc.txt.gz

161.18 kB

E96_STAU1_KD_80S.2_preprocessed_expressions.txt.gz

411.01 kB

E96_STAU1_KD_80S.2_preprocessed_rc.tab.gz

161.08 kB

HTSeq-count (CPM)

E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

220.07 kB

E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

477.99 kB

E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

182.78 kB

E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz

182.67 kB

HTSeq-count (CPM)

E96_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

169.15 kB

E96_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.62 kB

E96_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

HTSeq-count (CPM)

E96_STAU1_rescue_80S.2_preprocessed_rc.tab.gz

161.09 kB

E96_STAU1_rescue_80S.2_preprocessed_cpm.tab.gz

168.80 kB

E96_STAU1_rescue_80S.2_preprocessed_expressions.txt.gz

411.12 kB

E96_STAU1_rescue_80S.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

STAR

E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.43 MB

E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

175.87 kB

E96_STAU1_KD_P4-P8.1_preprocessed.bam

104.16 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.12 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bw

1.04 MB

E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

STAR

E96_STAU1_KD_tot.1_preprocessed.bam.bai

2.26 MB

E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab

171.19 kB

E96_STAU1_KD_tot.1_preprocessed.bw

1.18 MB

E96_STAU1_KD_tot.1_preprocessed.bam

110.88 MB

E96_STAU1_KD_tot.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.36 MB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.48 kB

E96_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.1_preprocessed_rc.tab.gz

181.79 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_cpm.tab.gz

221.12 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_HTseq_rc.txt.gz

181.90 kB

E96_STAU1_rescue_P4-P8.1_preprocessed_expressions.txt.gz

479.73 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.31 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.58 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.21 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

475.42 kB

E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

218.02 kB

E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

181.38 kB

E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

181.50 kB

HTSeq-count (CPM)

E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.31 kB

E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.67 kB

E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.36 kB

E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.78 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.40 kB

E96_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E96_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.16 kB

E96_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.26 kB

E96_STAU1_KD_P4-P8.1

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.05 kB

E96_STAU1_KD_P4-P8.1_fastqc.zip

480.63 kB

E96_STAU1_KD_P4-P8.1.fastq.gz

119.94 MB

BBDuk (single-end)

E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

106.02 MB

E96_STAU1_KD_P4-P8.1_statistics.txt.gz

402 B

fastqc

Directory

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

182.28 kB

E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

182.17 kB

E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

220.16 kB

E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

478.58 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.1_statistics.txt.gz

402 B

E96_STAU1_KD_P4-P8.1_preprocessed.fastq.gz

106.02 MB

STAR

E96_STAU1_KD_P4-P8.1_preprocessed.bw

1.04 MB

E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.43 MB

E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

175.87 kB

E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.12 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bam

104.15 MB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.1_preprocessed_HTseq_rc.txt.gz

182.28 kB

E96_STAU1_KD_P4-P8.1_preprocessed_cpm.tab.gz

220.16 kB

E96_STAU1_KD_P4-P8.1_preprocessed_rc.tab.gz

182.17 kB

E96_STAU1_KD_P4-P8.1_preprocessed_expressions.txt.gz

478.58 kB

STAR

E96_STAU1_KD_P4-P8.1_preprocessed_unmapped.out.mate1.fastq.gz

1.43 MB

E96_STAU1_KD_P4-P8.1_preprocessed_SJ.out.tab

175.87 kB

E96_STAU1_KD_P4-P8.1_preprocessed.bam

104.16 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bam.bai

2.12 MB

E96_STAU1_KD_P4-P8.1_preprocessed.bw

1.04 MB

E96_STAU1_KD_P4-P8.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_80S.1

FASTQ file (single-end)

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_80S.1.fastq.gz

67.42 MB

E96_STAU1_rescue_80S.1_fastqc.zip

498.28 kB

STAR

E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

66.50 kB

E96_STAU1_rescue_80S.1_preprocessed.bw

532.51 kB

E96_STAU1_rescue_80S.1_preprocessed.bam

69.22 MB

E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

669.30 kB

E96_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_80S.1_preprocessed.bam.bai

2.01 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.1_preprocessed.fastq.gz

54.24 MB

E96_STAU1_rescue_80S.1_statistics.txt.gz

324 B

HTSeq-count (CPM)

E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.78 kB

E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.36 kB

E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.31 kB

E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.67 kB

BBDuk (single-end)

E96_STAU1_rescue_80S.1_statistics.txt.gz

324 B

fastqc

Directory

E96_STAU1_rescue_80S.1_preprocessed.fastq.gz

54.24 MB

STAR

E96_STAU1_rescue_80S.1_preprocessed_SJ.out.tab

66.50 kB

E96_STAU1_rescue_80S.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_80S.1_preprocessed.bam.bai

2.01 MB

E96_STAU1_rescue_80S.1_preprocessed_unmapped.out.mate1.fastq.gz

669.65 kB

E96_STAU1_rescue_80S.1_preprocessed.bw

532.51 kB

E96_STAU1_rescue_80S.1_preprocessed.bam

69.25 MB

HTSeq-count (CPM)

E96_STAU1_rescue_80S.1_preprocessed_cpm.tab.gz

197.31 kB

E96_STAU1_rescue_80S.1_preprocessed_rc.tab.gz

172.67 kB

E96_STAU1_rescue_80S.1_preprocessed_expressions.txt.gz

447.36 kB

E96_STAU1_rescue_80S.1_preprocessed_HTseq_rc.txt.gz

172.78 kB

E96_STAU1_KD_P4-P8.2

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2.fastq.gz

107.47 MB

E96_STAU1_KD_P4-P8.2_fastqc.zip

537.74 kB

stderr.txt

1.05 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2_statistics.txt.gz

272 B

E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.47 MB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.48 kB

E96_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_P4-P8.2_preprocessed.fastq.gz

1.47 MB

E96_STAU1_KD_P4-P8.2_statistics.txt.gz

272 B

STAR

E96_STAU1_KD_P4-P8.2_preprocessed.bam

399.57 kB

E96_STAU1_KD_P4-P8.2_preprocessed.bw

61.70 kB

E96_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.49 kB

E96_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.30 MB

E96_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.50 MB

STAR

E96_STAU1_KD_P4-P8.2_preprocessed.bw

61.70 kB

E96_STAU1_KD_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

1.30 MB

E96_STAU1_KD_P4-P8.2_preprocessed.bam.bai

1.50 MB

E96_STAU1_KD_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_P4-P8.2_preprocessed.bam

399.57 kB

E96_STAU1_KD_P4-P8.2_preprocessed_SJ.out.tab

1.49 kB

HTSeq-count (CPM)

E96_STAU1_KD_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_KD_P4-P8.2_preprocessed_expressions.txt.gz

411.48 kB

E96_STAU1_KD_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_KD_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_rescue_80S.2

STAR

E96_STAU1_rescue_80S.2_preprocessed.bw

39.89 kB

E96_STAU1_rescue_80S.2_preprocessed_SJ.out.tab

884 B

E96_STAU1_rescue_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

547.05 kB

E96_STAU1_rescue_80S.2_preprocessed.bam

233.79 kB

E96_STAU1_rescue_80S.2_preprocessed.bam.bai

1.45 MB

FASTQ file (single-end)

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_80S.2.fastq.gz

70.14 MB

E96_STAU1_rescue_80S.2_fastqc.zip

538.57 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.2_preprocessed.fastq.gz

674.98 kB

E96_STAU1_rescue_80S.2_statistics.txt.gz

223 B

HTSeq-count (CPM)

E96_STAU1_rescue_80S.2_preprocessed_expressions.txt.gz

411.12 kB

E96_STAU1_rescue_80S.2_preprocessed_rc.tab.gz

161.09 kB

E96_STAU1_rescue_80S.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_rescue_80S.2_preprocessed_cpm.tab.gz

168.80 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_80S.2_statistics.txt.gz

223 B

E96_STAU1_rescue_80S.2_preprocessed.fastq.gz

675.40 kB

STAR

E96_STAU1_rescue_80S.2_preprocessed.bw

39.89 kB

E96_STAU1_rescue_80S.2_preprocessed.bam

233.80 kB

E96_STAU1_rescue_80S.2_preprocessed_unmapped.out.mate1.fastq.gz

547.29 kB

E96_STAU1_rescue_80S.2_preprocessed.bam.bai

1.45 MB

E96_STAU1_rescue_80S.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_80S.2_preprocessed_SJ.out.tab

884 B

HTSeq-count (CPM)

E96_STAU1_rescue_80S.2_preprocessed_rc.tab.gz

161.09 kB

E96_STAU1_rescue_80S.2_preprocessed_cpm.tab.gz

168.80 kB

E96_STAU1_rescue_80S.2_preprocessed_expressions.txt.gz

411.12 kB

E96_STAU1_rescue_80S.2_preprocessed_HTseq_rc.txt.gz

161.20 kB

E96_STAU1_KD_tot.1

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E96_STAU1_KD_tot.1.fastq.gz

110.93 MB

E96_STAU1_KD_tot.1_fastqc.zip

485.67 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.1_statistics.txt.gz

380 B

E96_STAU1_KD_tot.1_preprocessed.fastq.gz

97.09 MB

HTSeq-count (CPM)

E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

182.78 kB

E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

477.99 kB

E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz

182.67 kB

E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

220.07 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.1_preprocessed.fastq.gz

97.09 MB

E96_STAU1_KD_tot.1_statistics.txt.gz

380 B

STAR

E96_STAU1_KD_tot.1_preprocessed.bam

110.84 MB

E96_STAU1_KD_tot.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_KD_tot.1_preprocessed.bw

1.18 MB

E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab

171.19 kB

E96_STAU1_KD_tot.1_preprocessed.bam.bai

2.26 MB

E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.36 MB

HTSeq-count (CPM)

E96_STAU1_KD_tot.1_preprocessed_cpm.tab.gz

220.07 kB

E96_STAU1_KD_tot.1_preprocessed_expressions.txt.gz

477.99 kB

E96_STAU1_KD_tot.1_preprocessed_HTseq_rc.txt.gz

182.78 kB

E96_STAU1_KD_tot.1_preprocessed_rc.tab.gz

182.67 kB

STAR

E96_STAU1_KD_tot.1_preprocessed.bam.bai

2.26 MB

E96_STAU1_KD_tot.1_preprocessed_SJ.out.tab

171.19 kB

E96_STAU1_KD_tot.1_preprocessed.bw

1.18 MB

E96_STAU1_KD_tot.1_preprocessed.bam

110.88 MB

E96_STAU1_KD_tot.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_KD_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.36 MB

E96_STAU1_KD_tot.2

FASTQ file (single-end)

stderr.txt

1.01 kB

fastqc

Directory

E96_STAU1_KD_tot.2_fastqc.zip

543.20 kB

E96_STAU1_KD_tot.2.fastq.gz

101.76 MB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.2_statistics.txt.gz

258 B

E96_STAU1_KD_tot.2_preprocessed.fastq.gz

1.21 MB

HTSeq-count (CPM)

E96_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.62 kB

E96_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

169.15 kB

E96_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_KD_tot.2_statistics.txt.gz

258 B

E96_STAU1_KD_tot.2_preprocessed.fastq.gz

1.21 MB

STAR

E96_STAU1_KD_tot.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E96_STAU1_KD_tot.2_preprocessed_SJ.out.tab

708 B

E96_STAU1_KD_tot.2_preprocessed.bw

57.61 kB

E96_STAU1_KD_tot.2_preprocessed.bam

327.36 kB

E96_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

STAR

E96_STAU1_KD_tot.2_preprocessed.bw

57.61 kB

E96_STAU1_KD_tot.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_KD_tot.2_preprocessed.bam.bai

1.49 MB

E96_STAU1_KD_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

1.05 MB

E96_STAU1_KD_tot.2_preprocessed_SJ.out.tab

708 B

E96_STAU1_KD_tot.2_preprocessed.bam

327.36 kB

HTSeq-count (CPM)

E96_STAU1_KD_tot.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_KD_tot.2_preprocessed_cpm.tab.gz

169.15 kB

E96_STAU1_KD_tot.2_preprocessed_expressions.txt.gz

411.62 kB

E96_STAU1_KD_tot.2_preprocessed_HTseq_rc.txt.gz

161.27 kB

E96_STAU1_rescue_P1-P3.2

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E96_STAU1_rescue_P1-P3.2.fastq.gz

171.20 MB

E96_STAU1_rescue_P1-P3.2_fastqc.zip

538.18 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

1.45 MB

E96_STAU1_rescue_P1-P3.2_statistics.txt.gz

250 B

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.31 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.58 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.21 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.2_statistics.txt.gz

250 B

E96_STAU1_rescue_P1-P3.2_preprocessed.fastq.gz

1.45 MB

STAR

E96_STAU1_rescue_P1-P3.2_preprocessed.bam

532.70 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.48 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bw

53.29 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.17 MB

STAR

E96_STAU1_rescue_P1-P3.2_preprocessed.bam.bai

1.48 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bw

53.29 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_unmapped.out.mate1.fastq.gz

1.17 MB

E96_STAU1_rescue_P1-P3.2_preprocessed.bam

532.70 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_SJ.out.tab

2.78 kB

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.2_preprocessed_HTseq_rc.txt.gz

161.31 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_expressions.txt.gz

411.58 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_rc.tab.gz

161.21 kB

E96_STAU1_rescue_P1-P3.2_preprocessed_cpm.tab.gz

169.18 kB

E96_STAU1_rescue_P1-P3.1

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

182.87 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.98 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

480.74 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

222.41 kB

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.1.fastq.gz

180.96 MB

E96_STAU1_rescue_P1-P3.1_fastqc.zip

490.69 kB

stderr.txt

1.13 kB

STAR

E96_STAU1_rescue_P1-P3.1_preprocessed.bw

1.31 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam

161.35 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

168.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.50 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.29 MB

BBDuk (single-end)

E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

146.88 MB

fastqc

Directory

E96_STAU1_rescue_P1-P3.1_statistics.txt.gz

405 B

HTSeq-count (CPM)

E96_STAU1_rescue_P1-P3.1_preprocessed_HTseq_rc.txt.gz

182.98 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_rc.tab.gz

182.87 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_cpm.tab.gz

222.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_expressions.txt.gz

480.74 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P1-P3.1_statistics.txt.gz

405 B

E96_STAU1_rescue_P1-P3.1_preprocessed.fastq.gz

146.87 MB

STAR

E96_STAU1_rescue_P1-P3.1_preprocessed_unmapped.out.mate1.fastq.gz

2.29 MB

E96_STAU1_rescue_P1-P3.1_preprocessed_stats.txt

1.81 kB

E96_STAU1_rescue_P1-P3.1_preprocessed_SJ.out.tab

168.41 kB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam

161.40 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bam.bai

2.50 MB

E96_STAU1_rescue_P1-P3.1_preprocessed.bw

1.31 MB

E96_STAU1_rescue_tot.1

FASTQ file (single-end)

E96_STAU1_rescue_tot.1.fastq.gz

110.12 MB

stderr.txt

1.09 kB

fastqc

Directory

E96_STAU1_rescue_tot.1_fastqc.zip

495.13 kB

STAR

E96_STAU1_rescue_tot.1_preprocessed.bam

114.12 MB

E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

128.46 kB

E96_STAU1_rescue_tot.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.52 MB

E96_STAU1_rescue_tot.1_preprocessed.bam.bai

2.35 MB

E96_STAU1_rescue_tot.1_preprocessed_stats.txt

1.80 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.1_preprocessed.fastq.gz

90.41 MB

E96_STAU1_rescue_tot.1_statistics.txt.gz

376 B

HTSeq-count (CPM)

E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

181.50 kB

E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

475.42 kB

E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

218.02 kB

E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

181.38 kB

BBDuk (single-end)

E96_STAU1_rescue_tot.1_preprocessed.fastq.gz

90.41 MB

fastqc

Directory

E96_STAU1_rescue_tot.1_statistics.txt.gz

376 B

STAR

E96_STAU1_rescue_tot.1_preprocessed.bam.bai

2.35 MB

E96_STAU1_rescue_tot.1_preprocessed_stats.txt

1.80 kB

E96_STAU1_rescue_tot.1_preprocessed_SJ.out.tab

128.46 kB

E96_STAU1_rescue_tot.1_preprocessed.bam

114.14 MB

E96_STAU1_rescue_tot.1_preprocessed.bw

1.11 MB

E96_STAU1_rescue_tot.1_preprocessed_unmapped.out.mate1.fastq.gz

1.52 MB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.1_preprocessed_expressions.txt.gz

475.42 kB

E96_STAU1_rescue_tot.1_preprocessed_cpm.tab.gz

218.02 kB

E96_STAU1_rescue_tot.1_preprocessed_rc.tab.gz

181.38 kB

E96_STAU1_rescue_tot.1_preprocessed_HTseq_rc.txt.gz

181.50 kB

E96_STAU1_rescue_P4-P8.2

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.57 kB

FASTQ file (single-end)

fastqc

Directory

stderr.txt

1.13 kB

E96_STAU1_rescue_P4-P8.2_fastqc.zip

545.45 kB

E96_STAU1_rescue_P4-P8.2.fastq.gz

127.51 MB

STAR

E96_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

1.43 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam

284.09 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

756.04 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bw

46.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

HTSeq-count (CPM)

E96_STAU1_rescue_P4-P8.2_preprocessed_expressions.txt.gz

411.57 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_cpm.tab.gz

169.11 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_rc.tab.gz

161.17 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_HTseq_rc.txt.gz

161.28 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

922.15 kB

E96_STAU1_rescue_P4-P8.2_statistics.txt.gz

242 B

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_P4-P8.2_statistics.txt.gz

242 B

E96_STAU1_rescue_P4-P8.2_preprocessed.fastq.gz

922.13 kB

STAR

E96_STAU1_rescue_P4-P8.2_preprocessed.bam

284.09 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_unmapped.out.mate1.fastq.gz

756.16 kB

E96_STAU1_rescue_P4-P8.2_preprocessed_SJ.out.tab

1.43 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bw

46.28 kB

E96_STAU1_rescue_P4-P8.2_preprocessed.bam.bai

1.47 MB

E96_STAU1_rescue_P4-P8.2_preprocessed_stats.txt

1.78 kB

E96_STAU1_rescue_tot.2

FASTQ file (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.2_fastqc.zip

533.53 kB

stderr.txt

1.09 kB

E96_STAU1_rescue_tot.2.fastq.gz

104.50 MB

STAR

E96_STAU1_rescue_tot.2_preprocessed.bam

373.87 kB

E96_STAU1_rescue_tot.2_preprocessed.bw

46.31 kB

E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

639.39 kB

E96_STAU1_rescue_tot.2_preprocessed.bam.bai

1.46 MB

E96_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.89 kB

E96_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.40 kB

E96_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.26 kB

E96_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.16 kB

E96_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

BBDuk (single-end)

fastqc

Directory

E96_STAU1_rescue_tot.2_preprocessed.fastq.gz

818.12 kB

E96_STAU1_rescue_tot.2_statistics.txt.gz

236 B

BBDuk (single-end)

E96_STAU1_rescue_tot.2_preprocessed.fastq.gz

817.94 kB

fastqc

Directory

E96_STAU1_rescue_tot.2_statistics.txt.gz

236 B

STAR

E96_STAU1_rescue_tot.2_preprocessed_unmapped.out.mate1.fastq.gz

639.34 kB

E96_STAU1_rescue_tot.2_preprocessed.bam

373.87 kB

E96_STAU1_rescue_tot.2_preprocessed.bam.bai

1.46 MB

E96_STAU1_rescue_tot.2_preprocessed_SJ.out.tab

1.89 kB

E96_STAU1_rescue_tot.2_preprocessed.bw

46.31 kB

E96_STAU1_rescue_tot.2_preprocessed_stats.txt

1.78 kB

HTSeq-count (CPM)

E96_STAU1_rescue_tot.2_preprocessed_expressions.txt.gz

411.40 kB

E96_STAU1_rescue_tot.2_preprocessed_cpm.tab.gz

169.03 kB

E96_STAU1_rescue_tot.2_preprocessed_rc.tab.gz

161.16 kB

E96_STAU1_rescue_tot.2_preprocessed_HTseq_rc.txt.gz

161.26 kB