Back to Archive

Folder iconSOX2_bs

Miha Modic
Oct. 14, 2020

miha_AKO_E12_FA_2.1

FASTQ file (single-end)
miha_AKO_E12_FA_2.1.fastq.gz
141.02 MB
fastqc
Directory
miha_AKO_E12_FA_2.1_fastqc.zip
475.39 kB
stderr.txt
1.03 kB
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA_2.1_statistics.txt.gz
372 B
miha_AKO_E12_FA_2.1_preprocessed.fastq.gz
112.08 MB
STAR
miha_AKO_E12_FA_2.1_preprocessed_SJ.out.tab
111.04 kB
miha_AKO_E12_FA_2.1_preprocessed.bw
1.10 MB
miha_AKO_E12_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
2.86 MB
miha_AKO_E12_FA_2.1_preprocessed.bam.bai
2.28 MB
miha_AKO_E12_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_2.1_preprocessed.bam
145.53 MB
HTSeq-count (CPM)
miha_AKO_E12_FA_2.1_preprocessed_cpm.tab.gz
196.21 kB
miha_AKO_E12_FA_2.1_preprocessed_expressions.txt.gz
409.30 kB
miha_AKO_E12_FA_2.1_preprocessed_HTseq_rc.txt.gz
171.41 kB
miha_AKO_E12_FA_2.1_preprocessed_rc.tab.gz
171.31 kB

miha_WTmin_2i.1

FASTQ file (single-end)
fastqc
Directory
miha_WTmin_2i.1_fastqc.zip
464.21 kB
miha_WTmin_2i.1.fastq.gz
269.92 MB
stderr.txt
975 B
BBDuk (single-end)
miha_WTmin_2i.1_statistics.txt.gz
390 B
fastqc
Directory
miha_WTmin_2i.1_preprocessed.fastq.gz
229.61 MB
STAR
miha_WTmin_2i.1_preprocessed_SJ.out.tab
311.13 kB
miha_WTmin_2i.1_preprocessed.bam
307.22 MB
miha_WTmin_2i.1_preprocessed.bw
1.97 MB
miha_WTmin_2i.1_preprocessed_stats.txt
1.81 kB
miha_WTmin_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
5.74 MB
miha_WTmin_2i.1_preprocessed.bam.bai
2.53 MB
HTSeq-count (CPM)
miha_WTmin_2i.1_preprocessed_cpm.tab.gz
210.33 kB
miha_WTmin_2i.1_preprocessed_HTseq_rc.txt.gz
176.61 kB
miha_WTmin_2i.1_preprocessed_expressions.txt.gz
429.49 kB
miha_WTmin_2i.1_preprocessed_rc.tab.gz
176.50 kB

miha_SOX2_bs_G1_FA.1

FASTQ file (single-end)
stderr.txt
1.05 kB
fastqc
Directory
miha_SOX2_bs_G1_FA.1_fastqc.zip
460.91 kB
miha_SOX2_bs_G1_FA.1.fastq.gz
446.68 MB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_G1_FA.1_preprocessed.fastq.gz
377.92 MB
miha_SOX2_bs_G1_FA.1_statistics.txt.gz
433 B
STAR
miha_SOX2_bs_G1_FA.1_preprocessed.bam
492.11 MB
miha_SOX2_bs_G1_FA.1_preprocessed_SJ.out.tab
453.80 kB
miha_SOX2_bs_G1_FA.1_preprocessed.bam.bai
3.02 MB
miha_SOX2_bs_G1_FA.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
8.54 MB
HTSeq-count (CPM)
miha_SOX2_bs_G1_FA.1_preprocessed_rc.tab.gz
179.01 kB
miha_SOX2_bs_G1_FA.1_preprocessed_expressions.txt.gz
443.12 kB
miha_SOX2_bs_G1_FA.1_preprocessed_HTseq_rc.txt.gz
179.11 kB
miha_SOX2_bs_G1_FA.1_preprocessed_cpm.tab.gz
220.62 kB

miha_SOX2_bs_G1_2i.1

FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.05 kB
miha_SOX2_bs_G1_2i.1.fastq.gz
366.93 MB
miha_SOX2_bs_G1_2i.1_fastqc.zip
467.50 kB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_G1_2i.1_preprocessed.fastq.gz
305.83 MB
miha_SOX2_bs_G1_2i.1_statistics.txt.gz
447 B
STAR
miha_SOX2_bs_G1_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
7.82 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bam.bai
2.79 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bw
2.47 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bam
421.23 MB
miha_SOX2_bs_G1_2i.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_2i.1_preprocessed_SJ.out.tab
412.73 kB
HTSeq-count (CPM)
miha_SOX2_bs_G1_2i.1_preprocessed_cpm.tab.gz
215.69 kB
miha_SOX2_bs_G1_2i.1_preprocessed_expressions.txt.gz
435.93 kB
miha_SOX2_bs_G1_2i.1_preprocessed_HTseq_rc.txt.gz
178.26 kB
miha_SOX2_bs_G1_2i.1_preprocessed_rc.tab.gz
178.16 kB

miha_WTmin_FA.1

FASTQ file (single-end)
fastqc
Directory
miha_WTmin_FA.1_fastqc.zip
474.15 kB
stderr.txt
975 B
miha_WTmin_FA.1.fastq.gz
96.90 MB
BBDuk (single-end)
fastqc
Directory
miha_WTmin_FA.1_statistics.txt.gz
377 B
miha_WTmin_FA.1_preprocessed.fastq.gz
81.05 MB
STAR
miha_WTmin_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
1.96 MB
miha_WTmin_FA.1_preprocessed.bam
110.97 MB
miha_WTmin_FA.1_preprocessed.bam.bai
2.17 MB
miha_WTmin_FA.1_preprocessed_SJ.out.tab
163.21 kB
miha_WTmin_FA.1_preprocessed.bw
1.09 MB
miha_WTmin_FA.1_preprocessed_stats.txt
1.81 kB
HTSeq-count (CPM)
miha_WTmin_FA.1_preprocessed_rc.tab.gz
169.42 kB
miha_WTmin_FA.1_preprocessed_cpm.tab.gz
190.62 kB
miha_WTmin_FA.1_preprocessed_expressions.txt.gz
401.07 kB
miha_WTmin_FA.1_preprocessed_HTseq_rc.txt.gz
169.53 kB

miha_AKO_E12_FA.1

FASTQ file (single-end)
miha_AKO_E12_FA.1_fastqc.zip
458.39 kB
miha_AKO_E12_FA.1.fastq.gz
235.24 MB
fastqc
Directory
stderr.txt
1015 B
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA.1_statistics.txt.gz
406 B
miha_AKO_E12_FA.1_preprocessed.fastq.gz
197.71 MB
STAR
miha_AKO_E12_FA.1_preprocessed.bam
246.96 MB
miha_AKO_E12_FA.1_preprocessed.bw
1.81 MB
miha_AKO_E12_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
4.50 MB
miha_AKO_E12_FA.1_preprocessed.bam.bai
2.69 MB
miha_AKO_E12_FA.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA.1_preprocessed_SJ.out.tab
256.91 kB
HTSeq-count (CPM)
miha_AKO_E12_FA.1_preprocessed_rc.tab.gz
175.45 kB
miha_AKO_E12_FA.1_preprocessed_expressions.txt.gz
424.52 kB
miha_AKO_E12_FA.1_preprocessed_HTseq_rc.txt.gz
175.56 kB
miha_AKO_E12_FA.1_preprocessed_cpm.tab.gz
207.26 kB

miha_AKO_E12_FA_4.1

FASTQ file (single-end)
miha_AKO_E12_FA_4.1_fastqc.zip
469.00 kB
fastqc
Directory
miha_AKO_E12_FA_4.1.fastq.gz
173.48 MB
stderr.txt
1.03 kB
BBDuk (single-end)
miha_AKO_E12_FA_4.1_statistics.txt.gz
401 B
fastqc
Directory
miha_AKO_E12_FA_4.1_preprocessed.fastq.gz
138.76 MB
STAR
miha_AKO_E12_FA_4.1_preprocessed.bam.bai
2.35 MB
miha_AKO_E12_FA_4.1_preprocessed_unmapped.out.mate1.fastq.gz
3.69 MB
miha_AKO_E12_FA_4.1_preprocessed.bw
1.16 MB
miha_AKO_E12_FA_4.1_preprocessed.bam
178.98 MB
miha_AKO_E12_FA_4.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_4.1_preprocessed_SJ.out.tab
140.84 kB
HTSeq-count (CPM)
miha_AKO_E12_FA_4.1_preprocessed_cpm.tab.gz
198.90 kB
miha_AKO_E12_FA_4.1_preprocessed_rc.tab.gz
171.67 kB
miha_AKO_E12_FA_4.1_preprocessed_HTseq_rc.txt.gz
171.77 kB
miha_AKO_E12_FA_4.1_preprocessed_expressions.txt.gz
413.14 kB

miha_AKO_E12_FA_3.1

FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.03 kB
miha_AKO_E12_FA_3.1_fastqc.zip
473.09 kB
miha_AKO_E12_FA_3.1.fastq.gz
203.72 MB
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA_3.1_statistics.txt.gz
358 B
miha_AKO_E12_FA_3.1_preprocessed.fastq.gz
165.77 MB
STAR
miha_AKO_E12_FA_3.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_3.1_preprocessed.bam
218.53 MB
miha_AKO_E12_FA_3.1_preprocessed_unmapped.out.mate1.fastq.gz
3.88 MB
miha_AKO_E12_FA_3.1_preprocessed_SJ.out.tab
132.61 kB
miha_AKO_E12_FA_3.1_preprocessed.bw
1.24 MB
miha_AKO_E12_FA_3.1_preprocessed.bam.bai
2.32 MB
HTSeq-count (CPM)
miha_AKO_E12_FA_3.1_preprocessed_rc.tab.gz
172.90 kB
miha_AKO_E12_FA_3.1_preprocessed_expressions.txt.gz
418.15 kB
miha_AKO_E12_FA_3.1_preprocessed_cpm.tab.gz
202.19 kB
miha_AKO_E12_FA_3.1_preprocessed_HTseq_rc.txt.gz
173.01 kB

miha_SOX2_bs_F1_2i.1

FASTQ file (single-end)
miha_SOX2_bs_F1_2i.1.fastq.gz
226.14 MB
fastqc
Directory
stderr.txt
1.05 kB
miha_SOX2_bs_F1_2i.1_fastqc.zip
461.47 kB
BBDuk (single-end)
miha_SOX2_bs_F1_2i.1_statistics.txt.gz
415 B
fastqc
Directory
miha_SOX2_bs_F1_2i.1_preprocessed.fastq.gz
190.25 MB
STAR
miha_SOX2_bs_F1_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
5.69 MB
miha_SOX2_bs_F1_2i.1_preprocessed.bam
250.03 MB
miha_SOX2_bs_F1_2i.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_2i.1_preprocessed_SJ.out.tab
312.41 kB
miha_SOX2_bs_F1_2i.1_preprocessed.bw
1.96 MB
miha_SOX2_bs_F1_2i.1_preprocessed.bam.bai
2.65 MB
HTSeq-count (CPM)
miha_SOX2_bs_F1_2i.1_preprocessed_cpm.tab.gz
205.30 kB
miha_SOX2_bs_F1_2i.1_preprocessed_rc.tab.gz
175.44 kB
miha_SOX2_bs_F1_2i.1_preprocessed_HTseq_rc.txt.gz
175.34 kB
miha_SOX2_bs_F1_2i.1_preprocessed_expressions.txt.gz
422.05 kB

miha_AKO_E12_2i.1

FASTQ file (single-end)
miha_AKO_E12_2i.1_fastqc.zip
465.52 kB
fastqc
Directory
miha_AKO_E12_2i.1.fastq.gz
169.10 MB
stderr.txt
1015 B
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_2i.1_statistics.txt.gz
420 B
miha_AKO_E12_2i.1_preprocessed.fastq.gz
140.25 MB
STAR
miha_AKO_E12_2i.1_preprocessed_SJ.out.tab
255.85 kB
miha_AKO_E12_2i.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_2i.1_preprocessed.bam.bai
2.50 MB
miha_AKO_E12_2i.1_preprocessed.bam
203.47 MB
miha_AKO_E12_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
4.13 MB
miha_AKO_E12_2i.1_preprocessed.bw
1.66 MB
HTSeq-count (CPM)
miha_AKO_E12_2i.1_preprocessed_rc.tab.gz
174.11 kB
miha_AKO_E12_2i.1_preprocessed_expressions.txt.gz
415.94 kB
miha_AKO_E12_2i.1_preprocessed_cpm.tab.gz
201.44 kB
miha_AKO_E12_2i.1_preprocessed_HTseq_rc.txt.gz
174.21 kB

miha_SOX2_bs_F1_FA.1

FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA.1.fastq.gz
230.81 MB
stderr.txt
1.05 kB
miha_SOX2_bs_F1_FA.1_fastqc.zip
466.07 kB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA.1_statistics.txt.gz
415 B
miha_SOX2_bs_F1_FA.1_preprocessed.fastq.gz
194.99 MB
STAR
miha_SOX2_bs_F1_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
4.06 MB
miha_SOX2_bs_F1_FA.1_preprocessed.bw
1.70 MB
miha_SOX2_bs_F1_FA.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_FA.1_preprocessed.bam.bai
2.57 MB
miha_SOX2_bs_F1_FA.1_preprocessed_SJ.out.tab
265.10 kB
miha_SOX2_bs_F1_FA.1_preprocessed.bam
251.49 MB
HTSeq-count (CPM)
miha_SOX2_bs_F1_FA.1_preprocessed_expressions.txt.gz
423.09 kB
miha_SOX2_bs_F1_FA.1_preprocessed_rc.tab.gz
174.90 kB
miha_SOX2_bs_F1_FA.1_preprocessed_cpm.tab.gz
206.36 kB
miha_SOX2_bs_F1_FA.1_preprocessed_HTseq_rc.txt.gz
175.01 kB

miha_SOX2_bs_F1_FA_2.1

FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA_2.1.fastq.gz
245.61 MB
miha_SOX2_bs_F1_FA_2.1_fastqc.zip
473.72 kB
stderr.txt
1.09 kB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA_2.1_preprocessed.fastq.gz
193.10 MB
miha_SOX2_bs_F1_FA_2.1_statistics.txt.gz
399 B
STAR
miha_SOX2_bs_F1_FA_2.1_preprocessed.bw
1.58 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed.bam.bai
2.54 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed.bam
269.16 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
5.49 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed_SJ.out.tab
185.17 kB
HTSeq-count (CPM)
miha_SOX2_bs_F1_FA_2.1_preprocessed_HTseq_rc.txt.gz
174.35 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_rc.tab.gz
174.24 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_cpm.tab.gz
205.95 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_expressions.txt.gz
422.72 kB

miha_SOX2_bs_G1_FA_2.1

FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_G1_FA_2.1.fastq.gz
119.14 MB
miha_SOX2_bs_G1_FA_2.1_fastqc.zip
483.24 kB
stderr.txt
1.09 kB
BBDuk (single-end)
miha_SOX2_bs_G1_FA_2.1_statistics.txt.gz
358 B
fastqc
Directory
miha_SOX2_bs_G1_FA_2.1_preprocessed.fastq.gz
95.41 MB
STAR
miha_SOX2_bs_G1_FA_2.1_preprocessed.bam
134.51 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
2.83 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed.bam.bai
2.31 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed.bw
1.13 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_SJ.out.tab
128.18 kB
HTSeq-count (CPM)
miha_SOX2_bs_G1_FA_2.1_preprocessed_expressions.txt.gz
404.20 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_rc.tab.gz
169.66 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_HTseq_rc.txt.gz
169.77 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_cpm.tab.gz
192.75 kB

miha_WTmin_FA_2.1

FASTQ file (single-end)
fastqc
Directory
miha_WTmin_FA_2.1.fastq.gz
166.93 MB
miha_WTmin_FA_2.1_fastqc.zip
475.86 kB
stderr.txt
1015 B
BBDuk (single-end)
miha_WTmin_FA_2.1_preprocessed.fastq.gz
132.35 MB
miha_WTmin_FA_2.1_statistics.txt.gz
385 B
fastqc
Directory
STAR
miha_WTmin_FA_2.1_preprocessed.bam.bai
2.31 MB
miha_WTmin_FA_2.1_preprocessed.bam
168.88 MB
miha_WTmin_FA_2.1_preprocessed_SJ.out.tab
133.36 kB
miha_WTmin_FA_2.1_preprocessed.bw
1.14 MB
miha_WTmin_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_WTmin_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
3.39 MB
HTSeq-count (CPM)
miha_WTmin_FA_2.1_preprocessed_cpm.tab.gz
199.02 kB
miha_WTmin_FA_2.1_preprocessed_rc.tab.gz
171.52 kB
miha_WTmin_FA_2.1_preprocessed_expressions.txt.gz
413.20 kB
miha_WTmin_FA_2.1_preprocessed_HTseq_rc.txt.gz
171.62 kB

No Sample

FASTQ file (single-end)
miha_AKO_E12_2i.1_fastqc.zip
465.52 kB
fastqc
Directory
miha_AKO_E12_2i.1.fastq.gz
169.10 MB
stderr.txt
1015 B
FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_G1_FA_2.1.fastq.gz
119.14 MB
miha_SOX2_bs_G1_FA_2.1_fastqc.zip
483.24 kB
stderr.txt
1.09 kB
FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA_2.1.fastq.gz
245.61 MB
miha_SOX2_bs_F1_FA_2.1_fastqc.zip
473.72 kB
stderr.txt
1.09 kB
FASTQ file (single-end)
stderr.txt
1.05 kB
fastqc
Directory
miha_SOX2_bs_G1_FA.1_fastqc.zip
460.91 kB
miha_SOX2_bs_G1_FA.1.fastq.gz
446.68 MB
FASTQ file (single-end)
miha_AKO_E12_FA.1_fastqc.zip
458.39 kB
miha_AKO_E12_FA.1.fastq.gz
235.24 MB
fastqc
Directory
stderr.txt
1015 B
FASTQ file (single-end)
miha_AKO_E12_FA_4.1_fastqc.zip
469.00 kB
fastqc
Directory
miha_AKO_E12_FA_4.1.fastq.gz
173.48 MB
stderr.txt
1.03 kB
FASTQ file (single-end)
miha_AKO_E12_FA_2.1.fastq.gz
141.02 MB
fastqc
Directory
miha_AKO_E12_FA_2.1_fastqc.zip
475.39 kB
stderr.txt
1.03 kB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.03 kB
miha_AKO_E12_FA_3.1_fastqc.zip
473.09 kB
miha_AKO_E12_FA_3.1.fastq.gz
203.72 MB
FASTQ file (single-end)
miha_SOX2_bs_F1_2i.1.fastq.gz
226.14 MB
fastqc
Directory
stderr.txt
1.05 kB
miha_SOX2_bs_F1_2i.1_fastqc.zip
461.47 kB
FASTQ file (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA.1.fastq.gz
230.81 MB
stderr.txt
1.05 kB
miha_SOX2_bs_F1_FA.1_fastqc.zip
466.07 kB
FASTQ file (single-end)
fastqc
Directory
miha_WTmin_2i.1_fastqc.zip
464.21 kB
miha_WTmin_2i.1.fastq.gz
269.92 MB
stderr.txt
975 B
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.05 kB
miha_SOX2_bs_G1_2i.1.fastq.gz
366.93 MB
miha_SOX2_bs_G1_2i.1_fastqc.zip
467.50 kB
FASTQ file (single-end)
fastqc
Directory
miha_WTmin_FA.1_fastqc.zip
474.15 kB
stderr.txt
975 B
miha_WTmin_FA.1.fastq.gz
96.90 MB
FASTQ file (single-end)
fastqc
Directory
miha_WTmin_FA_2.1.fastq.gz
166.93 MB
miha_WTmin_FA_2.1_fastqc.zip
475.86 kB
stderr.txt
1015 B
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA.1_statistics.txt.gz
406 B
miha_AKO_E12_FA.1_preprocessed.fastq.gz
197.71 MB
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA_2.1_statistics.txt.gz
372 B
miha_AKO_E12_FA_2.1_preprocessed.fastq.gz
112.08 MB
BBDuk (single-end)
miha_SOX2_bs_F1_2i.1_statistics.txt.gz
415 B
fastqc
Directory
miha_SOX2_bs_F1_2i.1_preprocessed.fastq.gz
190.25 MB
BBDuk (single-end)
miha_AKO_E12_FA_4.1_statistics.txt.gz
401 B
fastqc
Directory
miha_AKO_E12_FA_4.1_preprocessed.fastq.gz
138.76 MB
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_2i.1_statistics.txt.gz
420 B
miha_AKO_E12_2i.1_preprocessed.fastq.gz
140.25 MB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA_2.1_preprocessed.fastq.gz
193.10 MB
miha_SOX2_bs_F1_FA_2.1_statistics.txt.gz
399 B
BBDuk (single-end)
fastqc
Directory
miha_AKO_E12_FA_3.1_statistics.txt.gz
358 B
miha_AKO_E12_FA_3.1_preprocessed.fastq.gz
165.77 MB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_F1_FA.1_statistics.txt.gz
415 B
miha_SOX2_bs_F1_FA.1_preprocessed.fastq.gz
194.99 MB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_G1_2i.1_preprocessed.fastq.gz
305.83 MB
miha_SOX2_bs_G1_2i.1_statistics.txt.gz
447 B
BBDuk (single-end)
miha_WTmin_2i.1_statistics.txt.gz
390 B
fastqc
Directory
miha_WTmin_2i.1_preprocessed.fastq.gz
229.61 MB
BBDuk (single-end)
fastqc
Directory
miha_SOX2_bs_G1_FA.1_preprocessed.fastq.gz
377.92 MB
miha_SOX2_bs_G1_FA.1_statistics.txt.gz
433 B
BBDuk (single-end)
miha_SOX2_bs_G1_FA_2.1_statistics.txt.gz
358 B
fastqc
Directory
miha_SOX2_bs_G1_FA_2.1_preprocessed.fastq.gz
95.41 MB
BBDuk (single-end)
miha_WTmin_FA_2.1_preprocessed.fastq.gz
132.35 MB
miha_WTmin_FA_2.1_statistics.txt.gz
385 B
fastqc
Directory
BBDuk (single-end)
fastqc
Directory
miha_WTmin_FA.1_statistics.txt.gz
377 B
miha_WTmin_FA.1_preprocessed.fastq.gz
81.05 MB
STAR
miha_AKO_E12_FA.1_preprocessed.bam
246.96 MB
miha_AKO_E12_FA.1_preprocessed.bw
1.81 MB
miha_AKO_E12_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
4.50 MB
miha_AKO_E12_FA.1_preprocessed.bam.bai
2.69 MB
miha_AKO_E12_FA.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA.1_preprocessed_SJ.out.tab
256.91 kB
STAR
miha_AKO_E12_FA_2.1_preprocessed_SJ.out.tab
111.04 kB
miha_AKO_E12_FA_2.1_preprocessed.bw
1.10 MB
miha_AKO_E12_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
2.86 MB
miha_AKO_E12_FA_2.1_preprocessed.bam.bai
2.28 MB
miha_AKO_E12_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_2.1_preprocessed.bam
145.53 MB
STAR
miha_SOX2_bs_F1_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
5.69 MB
miha_SOX2_bs_F1_2i.1_preprocessed.bam
250.03 MB
miha_SOX2_bs_F1_2i.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_2i.1_preprocessed_SJ.out.tab
312.41 kB
miha_SOX2_bs_F1_2i.1_preprocessed.bw
1.96 MB
miha_SOX2_bs_F1_2i.1_preprocessed.bam.bai
2.65 MB
STAR
miha_AKO_E12_FA_4.1_preprocessed.bam.bai
2.35 MB
miha_AKO_E12_FA_4.1_preprocessed_unmapped.out.mate1.fastq.gz
3.69 MB
miha_AKO_E12_FA_4.1_preprocessed.bw
1.16 MB
miha_AKO_E12_FA_4.1_preprocessed.bam
178.98 MB
miha_AKO_E12_FA_4.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_4.1_preprocessed_SJ.out.tab
140.84 kB
STAR
miha_AKO_E12_2i.1_preprocessed_SJ.out.tab
255.85 kB
miha_AKO_E12_2i.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_2i.1_preprocessed.bam.bai
2.50 MB
miha_AKO_E12_2i.1_preprocessed.bam
203.47 MB
miha_AKO_E12_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
4.13 MB
miha_AKO_E12_2i.1_preprocessed.bw
1.66 MB
STAR
miha_SOX2_bs_F1_FA_2.1_preprocessed.bw
1.58 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed.bam.bai
2.54 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed.bam
269.16 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
5.49 MB
miha_SOX2_bs_F1_FA_2.1_preprocessed_SJ.out.tab
185.17 kB
STAR
miha_AKO_E12_FA_3.1_preprocessed_stats.txt
1.81 kB
miha_AKO_E12_FA_3.1_preprocessed.bam
218.53 MB
miha_AKO_E12_FA_3.1_preprocessed_unmapped.out.mate1.fastq.gz
3.88 MB
miha_AKO_E12_FA_3.1_preprocessed_SJ.out.tab
132.61 kB
miha_AKO_E12_FA_3.1_preprocessed.bw
1.24 MB
miha_AKO_E12_FA_3.1_preprocessed.bam.bai
2.32 MB
STAR
miha_SOX2_bs_F1_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
4.06 MB
miha_SOX2_bs_F1_FA.1_preprocessed.bw
1.70 MB
miha_SOX2_bs_F1_FA.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_F1_FA.1_preprocessed.bam.bai
2.57 MB
miha_SOX2_bs_F1_FA.1_preprocessed_SJ.out.tab
265.10 kB
miha_SOX2_bs_F1_FA.1_preprocessed.bam
251.49 MB
STAR
miha_SOX2_bs_G1_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
7.82 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bam.bai
2.79 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bw
2.47 MB
miha_SOX2_bs_G1_2i.1_preprocessed.bam
421.23 MB
miha_SOX2_bs_G1_2i.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_2i.1_preprocessed_SJ.out.tab
412.73 kB
STAR
miha_WTmin_2i.1_preprocessed_SJ.out.tab
311.13 kB
miha_WTmin_2i.1_preprocessed.bam
307.22 MB
miha_WTmin_2i.1_preprocessed.bw
1.97 MB
miha_WTmin_2i.1_preprocessed_stats.txt
1.81 kB
miha_WTmin_2i.1_preprocessed_unmapped.out.mate1.fastq.gz
5.74 MB
miha_WTmin_2i.1_preprocessed.bam.bai
2.53 MB
STAR
miha_SOX2_bs_G1_FA.1_preprocessed.bam
492.11 MB
miha_SOX2_bs_G1_FA.1_preprocessed_SJ.out.tab
453.80 kB
miha_SOX2_bs_G1_FA.1_preprocessed.bam.bai
3.02 MB
miha_SOX2_bs_G1_FA.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
8.54 MB
STAR
miha_SOX2_bs_G1_FA_2.1_preprocessed.bam
134.51 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
2.83 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed.bam.bai
2.31 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed.bw
1.13 MB
miha_SOX2_bs_G1_FA_2.1_preprocessed_SJ.out.tab
128.18 kB
STAR
miha_WTmin_FA_2.1_preprocessed.bam.bai
2.31 MB
miha_WTmin_FA_2.1_preprocessed.bam
168.88 MB
miha_WTmin_FA_2.1_preprocessed_SJ.out.tab
133.36 kB
miha_WTmin_FA_2.1_preprocessed.bw
1.14 MB
miha_WTmin_FA_2.1_preprocessed_stats.txt
1.81 kB
miha_WTmin_FA_2.1_preprocessed_unmapped.out.mate1.fastq.gz
3.39 MB
STAR
miha_WTmin_FA.1_preprocessed_unmapped.out.mate1.fastq.gz
1.96 MB
miha_WTmin_FA.1_preprocessed.bam
110.97 MB
miha_WTmin_FA.1_preprocessed.bam.bai
2.17 MB
miha_WTmin_FA.1_preprocessed_SJ.out.tab
163.21 kB
miha_WTmin_FA.1_preprocessed.bw
1.09 MB
miha_WTmin_FA.1_preprocessed_stats.txt
1.81 kB
HTSeq-count (CPM)
miha_AKO_E12_FA.1_preprocessed_rc.tab.gz
175.45 kB
miha_AKO_E12_FA.1_preprocessed_expressions.txt.gz
424.52 kB
miha_AKO_E12_FA.1_preprocessed_HTseq_rc.txt.gz
175.56 kB
miha_AKO_E12_FA.1_preprocessed_cpm.tab.gz
207.26 kB
HTSeq-count (CPM)
miha_AKO_E12_FA_2.1_preprocessed_cpm.tab.gz
196.21 kB
miha_AKO_E12_FA_2.1_preprocessed_expressions.txt.gz
409.30 kB
miha_AKO_E12_FA_2.1_preprocessed_HTseq_rc.txt.gz
171.41 kB
miha_AKO_E12_FA_2.1_preprocessed_rc.tab.gz
171.31 kB
HTSeq-count (CPM)
miha_SOX2_bs_F1_2i.1_preprocessed_cpm.tab.gz
205.30 kB
miha_SOX2_bs_F1_2i.1_preprocessed_rc.tab.gz
175.44 kB
miha_SOX2_bs_F1_2i.1_preprocessed_HTseq_rc.txt.gz
175.34 kB
miha_SOX2_bs_F1_2i.1_preprocessed_expressions.txt.gz
422.05 kB
HTSeq-count (CPM)
miha_AKO_E12_FA_4.1_preprocessed_cpm.tab.gz
198.90 kB
miha_AKO_E12_FA_4.1_preprocessed_rc.tab.gz
171.67 kB
miha_AKO_E12_FA_4.1_preprocessed_HTseq_rc.txt.gz
171.77 kB
miha_AKO_E12_FA_4.1_preprocessed_expressions.txt.gz
413.14 kB
HTSeq-count (CPM)
miha_AKO_E12_2i.1_preprocessed_rc.tab.gz
174.11 kB
miha_AKO_E12_2i.1_preprocessed_expressions.txt.gz
415.94 kB
miha_AKO_E12_2i.1_preprocessed_cpm.tab.gz
201.44 kB
miha_AKO_E12_2i.1_preprocessed_HTseq_rc.txt.gz
174.21 kB
HTSeq-count (CPM)
miha_SOX2_bs_F1_FA_2.1_preprocessed_HTseq_rc.txt.gz
174.35 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_rc.tab.gz
174.24 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_cpm.tab.gz
205.95 kB
miha_SOX2_bs_F1_FA_2.1_preprocessed_expressions.txt.gz
422.72 kB
HTSeq-count (CPM)
miha_AKO_E12_FA_3.1_preprocessed_rc.tab.gz
172.90 kB
miha_AKO_E12_FA_3.1_preprocessed_expressions.txt.gz
418.15 kB
miha_AKO_E12_FA_3.1_preprocessed_cpm.tab.gz
202.19 kB
miha_AKO_E12_FA_3.1_preprocessed_HTseq_rc.txt.gz
173.01 kB
HTSeq-count (CPM)
miha_SOX2_bs_F1_FA.1_preprocessed_expressions.txt.gz
423.09 kB
miha_SOX2_bs_F1_FA.1_preprocessed_rc.tab.gz
174.90 kB
miha_SOX2_bs_F1_FA.1_preprocessed_cpm.tab.gz
206.36 kB
miha_SOX2_bs_F1_FA.1_preprocessed_HTseq_rc.txt.gz
175.01 kB
HTSeq-count (CPM)
miha_SOX2_bs_G1_2i.1_preprocessed_cpm.tab.gz
215.69 kB
miha_SOX2_bs_G1_2i.1_preprocessed_expressions.txt.gz
435.93 kB
miha_SOX2_bs_G1_2i.1_preprocessed_HTseq_rc.txt.gz
178.26 kB
miha_SOX2_bs_G1_2i.1_preprocessed_rc.tab.gz
178.16 kB
HTSeq-count (CPM)
miha_WTmin_2i.1_preprocessed_cpm.tab.gz
210.33 kB
miha_WTmin_2i.1_preprocessed_HTseq_rc.txt.gz
176.61 kB
miha_WTmin_2i.1_preprocessed_expressions.txt.gz
429.49 kB
miha_WTmin_2i.1_preprocessed_rc.tab.gz
176.50 kB
HTSeq-count (CPM)
miha_SOX2_bs_G1_FA.1_preprocessed_rc.tab.gz
179.01 kB
miha_SOX2_bs_G1_FA.1_preprocessed_expressions.txt.gz
443.12 kB
miha_SOX2_bs_G1_FA.1_preprocessed_HTseq_rc.txt.gz
179.11 kB
miha_SOX2_bs_G1_FA.1_preprocessed_cpm.tab.gz
220.62 kB
HTSeq-count (CPM)
miha_SOX2_bs_G1_FA_2.1_preprocessed_expressions.txt.gz
404.20 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_rc.tab.gz
169.66 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_HTseq_rc.txt.gz
169.77 kB
miha_SOX2_bs_G1_FA_2.1_preprocessed_cpm.tab.gz
192.75 kB
HTSeq-count (CPM)
miha_WTmin_FA_2.1_preprocessed_cpm.tab.gz
199.02 kB
miha_WTmin_FA_2.1_preprocessed_rc.tab.gz
171.52 kB
miha_WTmin_FA_2.1_preprocessed_expressions.txt.gz
413.20 kB
miha_WTmin_FA_2.1_preprocessed_HTseq_rc.txt.gz
171.62 kB
HTSeq-count (CPM)
miha_WTmin_FA.1_preprocessed_rc.tab.gz
169.42 kB
miha_WTmin_FA.1_preprocessed_cpm.tab.gz
190.62 kB
miha_WTmin_FA.1_preprocessed_expressions.txt.gz
401.07 kB
miha_WTmin_FA.1_preprocessed_HTseq_rc.txt.gz
169.53 kB