STAR
stau2-rep1-seq2_trimmed.bam
1.64 GB
stau2-rep1-seq2_trimmed_SJ.out.tab
0 B
stau2-rep1-seq2_trimmed.bam.bai
20.56 kB
stau2-rep1-seq2_trimmed_stats.txt
1.79 kB
stau2-rep1-seq2_trimmed_unmapped.out.mate1.fastq.gz
779.47 MB
Cutadapt (single-end)
stau2-rep2-seq2_trimmed.fastq.gz
1.34 GB
FASTQ file (CLIP)
stau2-input_fastqc.zip
352.74 kB
stau2-input.fastq.gz
5.11 GB
Cutadapt (single-end)
stau2-rep1-seq2_trimmed.fastq.gz
1.58 GB
STAR
stau2-rep2-seq2_trimmed.bam
1.36 GB
stau2-rep2-seq2_trimmed_unmapped.out.mate1.fastq.gz
532.01 MB
stau2-rep2-seq2_trimmed_stats.txt
1.79 kB
stau2-rep2-seq2_trimmed.bam.bai
20.56 kB
stau2-rep2-seq2_trimmed_SJ.out.tab
0 B
Cutadapt (single-end)
stau2-input_trimmed.fastq.gz
5.24 GB
FASTQ file (single-end)
SRR9847673_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2.fastq.gz
878.15 MB
SRR9847673_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2_fastqc.zip
361.27 kB
FASTQ file (single-end)
SRR9847676_GSM3982993_Stau2_Input_Homo_sapiens_RIP-Seq_fastqc.zip
379.62 kB
SRR9847676_GSM3982993_Stau2_Input_Homo_sapiens_RIP-Seq.fastq.gz
6.02 GB
Upload iCount sample annotation
STAU2_REP2_SEQ2.tab.gz
696 B
STAU2_REP2_SEQ2.xlsx
229.89 kB
Upload iCount sample annotation
STAU2_REP1_SEQ2.xlsx
229.91 kB
STAU2_REP1_SEQ2.tab.gz
695 B
Upload iCount sample annotation
STAU2_Input.xlsx
230.18 kB
FASTQ file (single-end)
SRR9847675_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2_fastqc.zip
365.82 kB
SRR9847675_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2.fastq.gz
594.36 MB
FASTQ file (single-end)
SRR9847672_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2_fastqc.zip
365.53 kB
SRR9847672_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2.fastq.gz
903.00 MB
Merge FASTQ (single-end)
SRR9847673_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2_merged_fastqc.zip
367.78 kB
SRR9847673_GSM3982991_Stau2_Rep1_Homo_sapiens_RIP-Seq_2_merged.fastq.gz
1.74 GB
FASTQ file (single-end)
SRR9847674_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2.fastq.gz
898.83 MB
SRR9847674_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2_fastqc.zip
365.11 kB
Merge FASTQ (single-end)
SRR9847675_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2_merged.fastq.gz
1.46 GB
SRR9847675_GSM3982992_Stau2_Rep2_Homo_sapiens_RIP-Seq_2_merged_fastqc.zip
367.54 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
191 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
189 B
FASTQ file (CLIP)
stau2-rep2-seq2.fastq.gz
1.31 GB
stau2-rep2-seq2_fastqc.zip
363.98 kB
FASTQ file (CLIP)
stau2-rep1-seq2_fastqc.zip
356.54 kB
stau2-rep1-seq2.fastq.gz
1.55 GB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
191 B
iCLIP reads proxy
stau2-rep2-seq2_mapped_to_genome.fastq.gz
532.01 MB
iCount RNA-maps
stau2-rep2-seq2_mapped_to_genome_single.tar.gz
1.89 MB
PEKA
4mer analysis of stau2-rep2-seq2_mapped_to_genome.tar.gz
501.56 kB
iCount xlsites
stau2-rep2-seq2_premapped_to_ncRNAs_reads_single.bed.gz
102.66 kB
stau2-rep2-seq2_premapped_to_ncRNAs_single.bedgraph
178 B
stau2-rep2-seq2_premapped_to_ncRNAs_singleAndMulti.bed.gz
133.33 kB
stau2-rep2-seq2_premapped_to_ncRNAs_skipped.bam
4.01 kB
stau2-rep2-seq2_premapped_to_ncRNAs_single.bed.gz
102.37 kB
iCLIP reads proxy
stau2-rep1-seq2_mapped_to_genome.fastq.gz
779.47 MB
iCount xlsites
stau2-rep1-seq2_premapped_to_ncRNAs_single.bedgraph
178 B
stau2-rep1-seq2_premapped_to_ncRNAs_skipped.bam
4.01 kB
stau2-rep1-seq2_premapped_to_ncRNAs_single.bed.gz
110.30 kB
stau2-rep1-seq2_premapped_to_ncRNAs_reads_single.bed.gz
110.67 kB
stau2-rep1-seq2_premapped_to_ncRNAs_singleAndMulti.bed.gz
151.73 kB
STAR
stau2-input_trimmed_SJ.out.tab
0 B
stau2-input_trimmed.bam
5.41 GB
stau2-input_trimmed_stats.txt
1.79 kB
stau2-input_trimmed.bam.bai
20.56 kB
stau2-input_trimmed_unmapped.out.mate1.fastq.gz
2.80 GB
STAR
stau2-rep2-seq2_mapped_to_genome_stats.txt
1.81 kB
stau2-rep2-seq2_mapped_to_genome.bam.bai
3.33 MB
stau2-rep2-seq2_mapped_to_genome_unmapped.out.mate1.fastq.gz
246.64 MB
stau2-rep2-seq2_mapped_to_genome.bam
1.11 GB
stau2-rep2-seq2_mapped_to_genome_SJ.out.tab
4.08 MB
STAR
stau2-rep1-seq2_mapped_to_genome.bam
1.67 GB
stau2-rep1-seq2_mapped_to_genome_unmapped.out.mate1.fastq.gz
379.86 MB
stau2-rep1-seq2_mapped_to_genome_SJ.out.tab
5.22 MB
stau2-rep1-seq2_mapped_to_genome_stats.txt
1.81 kB
stau2-rep1-seq2_mapped_to_genome.bam.bai
3.31 MB
iCLIP reads proxy
stau2-input_mapped_to_genome.fastq.gz
2.80 GB
iCount xlsites
stau2-rep2-seq2_mapped_to_genome_singleAndMulti.bed.gz
42.16 MB
stau2-rep2-seq2_mapped_to_genome_reads_single.bed.gz
18.30 MB
stau2-rep2-seq2_mapped_to_genome_single.bed.gz
18.18 MB
stau2-rep2-seq2_mapped_to_genome_skipped.bam
10.36 kB
stau2-rep2-seq2_mapped_to_genome_single.bedgraph
84.50 MB
STAR
stau2-input_mapped_to_genome.bam.bai
4.19 MB
stau2-input_mapped_to_genome_SJ.out.tab
7.63 MB
stau2-input_mapped_to_genome_stats.txt
1.82 kB
stau2-input_mapped_to_genome.bam
5.13 GB
stau2-input_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.50 GB
iCount summary
stau2-rep2-seq2_mapped_to_genome_single_summary_gene.tsv
2.19 MB
stau2-rep2-seq2_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau2-rep2-seq2_mapped_to_genome_single_summary_type.tsv
476 B
Paraclu
stau2-rep2-seq2_mapped_to_genome_single_peaks.bed.gz
185.39 kB
iCount xlsites
stau2-rep1-seq2_mapped_to_genome_single.bedgraph
111.87 MB
stau2-rep1-seq2_mapped_to_genome_single.bed.gz
24.10 MB
stau2-rep1-seq2_mapped_to_genome_singleAndMulti.bed.gz
56.95 MB
stau2-rep1-seq2_mapped_to_genome_skipped.bam
13.43 kB
stau2-rep1-seq2_mapped_to_genome_reads_single.bed.gz
24.29 MB
iCount xlsites
stau2-input_premapped_to_ncRNAs_skipped.bam
4.01 kB
stau2-input_premapped_to_ncRNAs_reads_single.bed.gz
190.76 kB
stau2-input_premapped_to_ncRNAs_single.bedgraph
170 B
stau2-input_premapped_to_ncRNAs_singleAndMulti.bed.gz
274.42 kB
stau2-input_premapped_to_ncRNAs_single.bed.gz
180.25 kB
iCount summary
stau2-rep1-seq2_mapped_to_genome_single_summary_gene.tsv
2.42 MB
stau2-rep1-seq2_mapped_to_genome_single_summary_type.tsv
478 B
stau2-rep1-seq2_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
Paraclu
stau2-rep1-seq2_mapped_to_genome_single_peaks.bed.gz
252.50 kB
iCount RNA-maps
stau2-rep1-seq2_mapped_to_genome_single.tar.gz
2.17 MB
PEKA
4mer analysis of stau2-rep1-seq2_mapped_to_genome.tar.gz
507.11 kB
iCount xlsites
stau2-input_mapped_to_genome_skipped.bam
15.85 kB
stau2-input_mapped_to_genome_single.bedgraph
366.46 MB
stau2-input_mapped_to_genome_single.bed.gz
79.21 MB
stau2-input_mapped_to_genome_reads_single.bed.gz
79.74 MB
stau2-input_mapped_to_genome_singleAndMulti.bed.gz
149.99 MB
iCount summary
stau2-input_mapped_to_genome_single_summary_gene.tsv
3.18 MB
stau2-input_mapped_to_genome_single_summary_subtype.tsv
1.06 kB
stau2-input_mapped_to_genome_single_summary_type.tsv
485 B
iCount RNA-maps
stau2-input_mapped_to_genome_single.tar.gz
3.14 MB
PEKA
4mer analysis of stau2-input_mapped_to_genome.tar.gz
527.35 kB
Paraclu
stau2-input_mapped_to_genome_single_peaks.bed.gz
805.11 kB
public STAU2 eCLIP K562
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