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Folder iconSTAU1 rat brain hiCLIP

Flora Lee
July 4, 2020

P7_WT_G

iCount group
P7_WT_G_grouped_reads.bed.gz
6.42 MB
P7_WT_G_grouped_cdna.bedgraph
28.32 MB
P7_WT_G_grouped_cdna.bed.gz
6.22 MB
iCount summary
P7_WT_G_grouped_cdna_summary_type.tsv
437 B
P7_WT_G_grouped_cdna_summary_subtype.tsv
1.00 kB
P7_WT_G_grouped_cdna_summary_gene.tsv
1.32 MB
Paraclu
P7_WT_G_grouped_cdna_peaks.bed.gz
95.67 kB
iCount RNA-maps
P7_WT_G_grouped_cdna.tar.gz
1.72 MB
iCount annotate
P7_WT_G_grouped_cdna_annotated.bedgraph
28.32 MB
P7_WT_G_grouped_cdna_annotated.bed.gz
7.02 MB
PEKA
4mer analysis of P7_WT_G_grouped_cdna.tar.gz
556.28 kB

STAU1_cortex:5week_Stau2KD_1.5U_before_1_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.tar.gz
173.69 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
648.25 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1011 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.18 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.18 kB
Cutadapt (single-end)
report.txt
693 B
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.fastq.gz
12.96 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam
16.36 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
8.16 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
220.61 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
34.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.25 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
34.61 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
8.16 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.tar.gz
168.87 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam
20.28 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
3.13 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
154.88 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam.bai
3.44 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bw
1.87 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.fastq.gz
12.13 MB
report.txt
694 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.51 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
439.37 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.78 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
448.15 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
565.23 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
665.28 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.tar.gz
173.91 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.fastq.gz
12.27 MB
report.txt
694 B
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam
15.03 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
7.42 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
220.23 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
17.31 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
220.31 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
7.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam
15.26 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
18.30 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
30.04 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
30.30 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
40.30 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
7.42 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
31.17 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
30.98 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
42.24 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
7.54 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq.fastq.gz
12.63 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_fastqc.zip
481.75 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam
16.84 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.89 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam.bai
2.61 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
146.06 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bw
1.19 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam.bai
2.39 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.88 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bw
1.05 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
144.36 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.bam
16.17 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
431.73 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.72 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
962.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
423.09 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
564.84 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
841.00 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.69 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
412.83 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
421.35 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
647.76 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1015 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.16 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
565.08 kB

STAU1_cortex:5week_Stau2KD_1.5U_after_5_20200610_FL_reseq

iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
450 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
493.26 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.28 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
487.15 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.fastq.gz
7.58 MB
report.txt
692 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam
9.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.53 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bw
220.52 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
47.58 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
29.15 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
29.30 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.53 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.tar.gz
136.61 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam
15.72 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
84.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bw
2.05 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.40 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam.bai
3.81 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
693 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.fastq.gz
6.07 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
278.95 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.05 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
274.49 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.65 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
523.74 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
491.20 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.33 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
693 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.fastq.gz
6.29 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.tar.gz
145.71 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam.bai
16.54 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
4.09 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bw
220.13 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam
7.57 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
4.29 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bw
220.27 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam.bai
18.37 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam
7.89 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
4.29 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
25.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
35.58 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
25.52 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
24.60 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
24.44 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
33.18 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
4.09 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.02 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam
9.16 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam.bai
2.45 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
64.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bw
887.99 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_fastqc.zip
532.08 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq.fastq.gz
7.57 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
236.05 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
934.20 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
659.50 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
240.40 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
61.31 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam
8.16 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.01 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam.bai
2.07 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bw
662.82 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
870.43 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
217.99 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
478.44 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
222.17 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
481.35 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
998 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.28 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.tar.gz
136.67 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
488.92 kB

input_cortex:5week_WT_1.5U_2_20200723_FL

STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bw
221.59 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam
484.65 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
346.52 MB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
429.74 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.tar.gz
792.53 kB
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
464 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_peaks.bed.gz
47.04 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
444.52 kB
Cutadapt (single-end)
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.fastq.gz
359.18 MB
fastqc
Directory
report.txt
677 B
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bed.gz
87.71 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
191.39 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
88.29 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.fastq.gz
346.52 MB
iCount RNA-maps
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.tar.gz
751.84 kB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_SJ.out.tab
573.65 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam.bai
3.15 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
292.43 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam
569.55 MB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
13.84 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_reads_single.bed.gz
2.88 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_skipped.bam
13.53 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bedgraph
11.76 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bed.gz
2.84 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
677 B
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.fastq.gz
325.98 MB
Paraclu
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_peaks.bed.gz
84.38 kB
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Cutadapt (single-end)
report.txt
677 B
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.fastq.gz
333.13 MB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
465.70 kB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bw
221.39 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam
427.87 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
315.88 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam
439.07 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bw
221.46 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
322.53 MB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bed.gz
65.64 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.05 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.74 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.fastq.gz
322.53 MB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bed.gz
59.71 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
60.02 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
97.50 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.fastq.gz
315.88 MB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_SJ.out.tab
510.14 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bw
10.52 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam
472.55 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam.bai
3.05 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
284.70 MB
FASTQ file (CLIP)
input-cortex-5week-wt-1-5u-2-20200723-fl_fastqc.zip
508.92 kB
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl.fastq.gz
370.99 MB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bedgraph
10.51 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
8.64 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_reads_single.bed.gz
2.58 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_skipped.bam
13.52 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bed.gz
2.53 MB
iCount RNA-maps
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.tar.gz
769.80 kB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bw
8.07 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam.bai
2.95 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_SJ.out.tab
485.65 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
284.10 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.bam
448.21 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_reads_single.bed.gz
2.27 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
6.58 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_skipped.bam
13.52 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bed.gz
2.23 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.bedgraph
9.36 MB
Paraclu
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_peaks.bed.gz
42.16 kB
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.17 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
465 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB

STAU1_cortex:P7_WT_1.5U_after_G_20200610_FL_reseq

iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
42.51 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
336.41 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
836.40 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.10 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
339.36 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.fastq.gz
107.75 MB
report.txt
685 B
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam
127.67 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
44.66 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
75.83 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
54.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
54.51 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
44.66 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam
134.77 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam.bai
3.99 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
538.67 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.63 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.fastq.gz
104.63 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1000.73 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
984.44 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.98 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.91 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
881.75 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.59 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
690.53 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.fastq.gz
105.27 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
362.03 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam
122.83 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.96 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam.bai
18.30 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam.bai
19.35 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam
123.78 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
42.51 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
61.07 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.47 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.76 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
41.96 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
49.43 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
58.30 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.19 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam.bai
3.28 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam
126.40 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.19 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
520.02 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_fastqc.zip
465.83 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq.fastq.gz
102.35 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
853.36 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
870.16 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.94 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.51 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
682.09 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.11 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam
124.43 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
511.31 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam.bai
2.92 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.31 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
813.16 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
796.59 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.67 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.10 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
679.00 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
815.04 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B

input_cortex:5week_Stau2KD_1.5U_1_20200723_FL

FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_fastqc.zip
477.73 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl.fastq.gz
741.20 MB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.tar.gz
1.10 MB
iCount summary
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
Paraclu
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_peaks.bed.gz
93.64 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.fastq.gz
726.46 MB
report.txt
682 B
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam
973.49 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
697.56 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bw
221.74 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.fastq.gz
697.56 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
230.74 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
105.95 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
106.68 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.tar.gz
491.66 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.tar.gz
515.13 kB
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_SJ.out.tab
1.10 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
561.56 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam.bai
2.70 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam
1.23 GB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bed.gz
5.39 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
25.81 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.49 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bedgraph
23.01 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_skipped.bam
14.24 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.fastq.gz
622.12 MB
report.txt
682 B
Paraclu
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_peaks.bed.gz
144.50 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.42 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_type.tsv
473 B
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.tar.gz
521.18 kB
Cutadapt (single-end)
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.fastq.gz
644.92 MB
fastqc
Directory
report.txt
682 B
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bw
221.49 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
599.12 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam
809.73 MB
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam
843.35 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
620.54 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bw
221.66 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.fastq.gz
620.54 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
77.06 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
134.39 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
77.50 kB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
116.56 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
70.71 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
70.21 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.fastq.gz
599.12 MB
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
533.88 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam
935.92 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam.bai
2.57 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_SJ.out.tab
1.01 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
17.99 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bed.gz
5.11 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_skipped.bam
14.23 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.21 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bedgraph
21.90 MB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.tar.gz
1.08 MB
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_SJ.out.tab
981.76 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
532.49 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam.bai
2.47 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.bam
853.77 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bedgraph
19.97 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
12.99 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.70 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bed.gz
4.59 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_skipped.bam
14.24 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.tar.gz
1.06 MB
iCount summary
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_peaks.bed.gz
82.04 kB

input_cortex:P7_WT_1.5U_G_20200723_FL

PEKA
4mer analysis of input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.tar.gz
480.53 kB
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_peaks.bed.gz
78.08 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.tar.gz
982.95 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.fastq.gz
502.25 MB
report.txt
674 B
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
457.16 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam
675.10 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bw
221.79 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.fastq.gz
457.16 MB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bed.gz
108.67 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
232.83 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
109.57 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.tar.gz
479.73 kB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam.bai
2.53 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam
740.11 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_SJ.out.tab
930.84 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
378.37 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
674 B
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.fastq.gz
473.54 MB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
20.01 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.18 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bed.gz
5.06 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bedgraph
21.72 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_skipped.bam
14.62 kB
Paraclu
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_peaks.bed.gz
89.26 kB
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
iCount RNA-maps
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.tar.gz
1005.37 kB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.tar.gz
487.78 kB
Cutadapt (single-end)
report.txt
674 B
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.fastq.gz
479.21 MB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
434.45 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bw
221.62 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam
619.05 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bw
221.65 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam
628.74 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
439.00 MB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bed.gz
75.17 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
75.73 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
124.28 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.fastq.gz
434.45 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.fastq.gz
439.00 MB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.82 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.71 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
142.13 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_fastqc.zip
458.89 kB
input-cortex-p7-wt-1-5u-g-20200723-fl.fastq.gz
528.80 MB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
368.98 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam.bai
2.50 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_SJ.out.tab
829.15 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam
677.80 MB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam
661.16 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.bam.bai
2.48 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
368.13 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_SJ.out.tab
792.85 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_skipped.bam
14.63 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bedgraph
20.23 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
15.19 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.83 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bed.gz
4.71 MB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.59 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bed.gz
4.48 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_skipped.bam
14.63 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bedgraph
19.28 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
13.58 MB
Paraclu
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_peaks.bed.gz
73.18 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.tar.gz
963.48 kB
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.36 MB

input_cortex:P7_WT_1.5U_F_20200723_FL

iCLIP reads proxy
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.fastq.gz
584.23 MB
fastqc
Directory
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
105.01 kB
iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
474 B
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.tar.gz
517.88 kB
FASTQ file (CLIP)
input-cortex-p7-wt-1-5u-f-20200723-fl.fastq.gz
705.17 MB
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_fastqc.zip
489.90 kB
iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.48 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
113.87 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.14 MB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.fastq.gz
682.24 MB
report.txt
674 B
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
621.23 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam
920.35 MB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bed.gz
115.31 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
116.19 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
251.82 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.fastq.gz
621.23 MB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.tar.gz
520.34 kB
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
494.40 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_SJ.out.tab
1.25 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam
1.04 GB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam.bai
2.40 MB
Cutadapt (single-end)
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.fastq.gz
628.26 MB
fastqc
Directory
report.txt
674 B
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bed.gz
6.93 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
29.44 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_skipped.bam
14.95 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_reads_single.bed.gz
7.10 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bedgraph
30.05 MB
iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.51 MB
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
159.15 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.17 MB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.tar.gz
531.55 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.fastq.gz
639.40 MB
report.txt
674 B
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam
823.43 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
574.54 MB
iCLIP reads proxy
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.fastq.gz
574.54 MB
fastqc
Directory
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam
841.40 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
584.23 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bw
221.71 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_SJ.out.tab
0 B
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bed.gz
86.15 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
151.75 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
87.01 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
130.83 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bed.gz
77.41 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
78.06 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam
926.34 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_SJ.out.tab
1.13 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam.bai
2.33 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
479.93 MB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_skipped.bam
14.96 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.71 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bedgraph
28.46 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
21.65 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bed.gz
6.54 MB
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
478.78 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam.bai
2.30 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam
890.44 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_SJ.out.tab
1.07 MB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bed.gz
6.13 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.30 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
18.46 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_skipped.bam
14.95 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bedgraph
26.84 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.12 MB

P7_WT_F

Paraclu
P7_WT_F_grouped_cdna_peaks.bed.gz
95.43 kB
iCount RNA-maps
P7_WT_F_grouped_cdna.tar.gz
1.88 MB
PEKA
4mer analysis of P7_WT_F_grouped_cdna.tar.gz
578.05 kB
iCount group
P7_WT_F_grouped_cdna.bed.gz
7.21 MB
P7_WT_F_grouped_cdna.bedgraph
33.31 MB
P7_WT_F_grouped_reads.bed.gz
7.46 MB
iCount summary
P7_WT_F_grouped_cdna_summary_gene.tsv
1.34 MB
P7_WT_F_grouped_cdna_summary_subtype.tsv
1023 B
P7_WT_F_grouped_cdna_summary_type.tsv
441 B
iCount annotate
P7_WT_F_grouped_cdna_annotated.bed.gz
8.13 MB
P7_WT_F_grouped_cdna_annotated.bedgraph
33.31 MB

P7_WT_H

iCount RNA-maps
P7_WT_H_grouped_cdna.tar.gz
1.74 MB
Paraclu
P7_WT_H_grouped_cdna_peaks.bed.gz
190.41 kB
PEKA
4mer analysis of P7_WT_H_grouped_cdna.tar.gz
565.90 kB
iCount group
P7_WT_H_grouped_cdna.bedgraph
29.49 MB
P7_WT_H_grouped_reads.bed.gz
6.73 MB
P7_WT_H_grouped_cdna.bed.gz
6.53 MB
iCount annotate
P7_WT_H_grouped_cdna_annotated.bedgraph
29.49 MB
P7_WT_H_grouped_cdna_annotated.bed.gz
7.36 MB
iCount summary
P7_WT_H_grouped_cdna_summary_subtype.tsv
1016 B
P7_WT_H_grouped_cdna_summary_type.tsv
432 B
P7_WT_H_grouped_cdna_summary_gene.tsv
1.33 MB

P0_WT_A

PEKA
4mer analysis of P0_WT_A_grouped_cdna.tar.gz
586.27 kB
iCount group
P0_WT_A_grouped_cdna.bed.gz
9.59 MB
P0_WT_A_grouped_cdna.bedgraph
44.74 MB
P0_WT_A_grouped_reads.bed.gz
9.96 MB
iCount RNA-maps
P0_WT_A_grouped_cdna.tar.gz
2.22 MB
iCount annotate
P0_WT_A_grouped_cdna_annotated.bedgraph
44.74 MB
P0_WT_A_grouped_cdna_annotated.bed.gz
10.81 MB
iCount summary
P0_WT_A_grouped_cdna_summary_subtype.tsv
1023 B
P0_WT_A_grouped_cdna_summary_gene.tsv
1.40 MB
P0_WT_A_grouped_cdna_summary_type.tsv
438 B
Paraclu
P0_WT_A_grouped_cdna_peaks.bed.gz
112.56 kB

P0_WT_D

iCount summary
P0_WT_D_grouped_cdna_summary_type.tsv
444 B
P0_WT_D_grouped_cdna_summary_gene.tsv
1.44 MB
P0_WT_D_grouped_cdna_summary_subtype.tsv
1.00 kB
iCount annotate
P0_WT_D_grouped_cdna_annotated.bed.gz
11.14 MB
P0_WT_D_grouped_cdna_annotated.bedgraph
45.75 MB
iCount RNA-maps
P0_WT_D_grouped_cdna.tar.gz
2.25 MB
Paraclu
P0_WT_D_grouped_cdna_peaks.bed.gz
140.24 kB
PEKA
4mer analysis of P0_WT_D_grouped_cdna.tar.gz
603.33 kB
iCount group
P0_WT_D_grouped_cdna.bed.gz
9.89 MB
P0_WT_D_grouped_cdna.bedgraph
45.75 MB
P0_WT_D_grouped_reads.bed.gz
10.25 MB

P0_WT_E

iCount summary
P0_WT_E_grouped_cdna_summary_subtype.tsv
1021 B
P0_WT_E_grouped_cdna_summary_type.tsv
441 B
P0_WT_E_grouped_cdna_summary_gene.tsv
1.37 MB
PEKA
4mer analysis of P0_WT_E_grouped_cdna.tar.gz
573.37 kB
iCount annotate
P0_WT_E_grouped_cdna_annotated.bed.gz
9.48 MB
P0_WT_E_grouped_cdna_annotated.bedgraph
38.91 MB
iCount RNA-maps
P0_WT_E_grouped_cdna.tar.gz
2.05 MB
Paraclu
P0_WT_E_grouped_cdna_peaks.bed.gz
93.59 kB
iCount group
P0_WT_E_grouped_reads.bed.gz
8.79 MB
P0_WT_E_grouped_cdna.bedgraph
38.91 MB
P0_WT_E_grouped_cdna.bed.gz
8.40 MB

5week_WT_2

iCount summary
5week_WT_2_grouped_cdna_summary_type.tsv
440 B
5week_WT_2_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_WT_2_grouped_cdna_summary_gene.tsv
1.47 MB
iCount annotate
5week_WT_2_grouped_cdna_annotated.bed.gz
11.59 MB
5week_WT_2_grouped_cdna_annotated.bedgraph
47.76 MB
iCount RNA-maps
5week_WT_2_grouped_cdna.tar.gz
2.27 MB
Paraclu
5week_WT_2_grouped_cdna_peaks.bed.gz
278.97 kB
PEKA
4mer analysis of 5week_WT_2_grouped_cdna.tar.gz
643.31 kB
iCount group
5week_WT_2_grouped_cdna.bed.gz
10.30 MB
5week_WT_2_grouped_reads.bed.gz
10.92 MB
5week_WT_2_grouped_cdna.bedgraph
47.76 MB

5week_WT_4

iCount summary
5week_WT_4_grouped_cdna_summary_type.tsv
442 B
5week_WT_4_grouped_cdna_summary_gene.tsv
1.50 MB
5week_WT_4_grouped_cdna_summary_subtype.tsv
1.01 kB
iCount annotate
5week_WT_4_grouped_cdna_annotated.bed.gz
14.48 MB
5week_WT_4_grouped_cdna_annotated.bedgraph
60.85 MB
iCount RNA-maps
5week_WT_4_grouped_cdna.tar.gz
2.52 MB
Paraclu
5week_WT_4_grouped_cdna_peaks.bed.gz
293.24 kB
PEKA
4mer analysis of 5week_WT_4_grouped_cdna.tar.gz
672.91 kB
iCount group
5week_WT_4_grouped_cdna.bed.gz
12.89 MB
5week_WT_4_grouped_cdna.bedgraph
60.85 MB
5week_WT_4_grouped_reads.bed.gz
13.45 MB

5week_WT_6

iCount summary
5week_WT_6_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_WT_6_grouped_cdna_summary_type.tsv
439 B
5week_WT_6_grouped_cdna_summary_gene.tsv
1.45 MB
iCount annotate
5week_WT_6_grouped_cdna_annotated.bed.gz
11.40 MB
5week_WT_6_grouped_cdna_annotated.bedgraph
47.04 MB
Paraclu
5week_WT_6_grouped_cdna_peaks.bed.gz
246.50 kB
iCount RNA-maps
5week_WT_6_grouped_cdna.tar.gz
2.27 MB
PEKA
4mer analysis of 5week_WT_6_grouped_cdna.tar.gz
644.03 kB
iCount group
5week_WT_6_grouped_reads.bed.gz
10.55 MB
5week_WT_6_grouped_cdna.bed.gz
10.12 MB
5week_WT_6_grouped_cdna.bedgraph
47.04 MB

5week_Stau2KD_1

iCount annotate
5week_Stau2KD_1_grouped_cdna_annotated.bedgraph
52.13 MB
5week_Stau2KD_1_grouped_cdna_annotated.bed.gz
12.50 MB
iCount summary
5week_Stau2KD_1_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_Stau2KD_1_grouped_cdna_summary_gene.tsv
1.45 MB
5week_Stau2KD_1_grouped_cdna_summary_type.tsv
445 B
PEKA
4mer analysis of 5week_Stau2KD_1_grouped_cdna.tar.gz
653.56 kB
iCount group
5week_Stau2KD_1_grouped_reads.bed.gz
11.61 MB
5week_Stau2KD_1_grouped_cdna.bed.gz
11.10 MB
5week_Stau2KD_1_grouped_cdna.bedgraph
52.13 MB
Paraclu
5week_Stau2KD_1_grouped_cdna_peaks.bed.gz
238.18 kB
iCount RNA-maps
5week_Stau2KD_1_grouped_cdna.tar.gz
2.39 MB

5week_Stau2KD_5

iCount RNA-maps
5week_Stau2KD_5_grouped_cdna.tar.gz
2.41 MB
Paraclu
5week_Stau2KD_5_grouped_cdna_peaks.bed.gz
230.27 kB
iCount annotate
5week_Stau2KD_5_grouped_cdna_annotated.bed.gz
13.21 MB
5week_Stau2KD_5_grouped_cdna_annotated.bedgraph
55.05 MB
PEKA
4mer analysis of 5week_Stau2KD_5_grouped_cdna.tar.gz
658.33 kB
iCount summary
5week_Stau2KD_5_grouped_cdna_summary_subtype.tsv
1.01 kB
5week_Stau2KD_5_grouped_cdna_summary_gene.tsv
1.48 MB
5week_Stau2KD_5_grouped_cdna_summary_type.tsv
445 B
iCount group
5week_Stau2KD_5_grouped_cdna.bed.gz
11.76 MB
5week_Stau2KD_5_grouped_cdna.bedgraph
55.05 MB
5week_Stau2KD_5_grouped_reads.bed.gz
12.28 MB

LEE851A2-A22_S41_L002_R1_001.fastq.gz

FASTQ file (single-end)
stderr.txt
1.21 kB
fastqc
Directory
LEE851A2-A22_S41_L002_R1_001.fastq.gz
17.06 GB
LEE851A2-A22_S41_L002_R1_001_fastqc.zip
504.64 kB

STAU1_cortex:P0_WT_1-5U_before_D_20200610_FL

iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.20 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
31.59 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam
529.23 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
201.20 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.fastq.gz
201.20 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
116.77 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
70.89 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
70.10 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
79.57 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
546.13 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam.bai
4.12 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.00 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.40 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bedgraph
19.16 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bed.gz
4.26 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.42 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_skipped.bam
13.21 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
33.90 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.tar.gz
382.87 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.tar.gz
487.13 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.tar.gz
485.21 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.fastq.gz
442.51 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl.fastq.gz
428.75 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_fastqc.zip
447.24 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.fastq.gz
444.17 MB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
193.61 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam.bai
19.14 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam
515.04 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_stats.txt
1.78 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.tar.gz
1.45 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.fastq.gz
451.19 MB
report.txt
680 B
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
195.02 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam
517.72 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.fastq.gz
193.61 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
61.38 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
60.88 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
82.60 kB
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.fastq.gz
195.02 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
88.34 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
63.63 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
62.91 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam.bai
3.83 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
518.87 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
1.95 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.30 MB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
513.10 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
1.93 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.19 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam.bai
3.56 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.64 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_skipped.bam
13.21 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.20 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bed.gz
4.04 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bedgraph
18.33 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.tar.gz
1.44 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.88 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_skipped.bam
13.20 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bedgraph
17.90 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.08 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bed.gz
3.92 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.tar.gz
1.44 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.17 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
31.50 kB

STAU1_cortex:P7_WT_1-5U_before_F_20200610_FL

STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam
555.68 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
201.09 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.10 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.04 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.fastq.gz
201.09 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
69.50 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.22 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
68.72 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
604.17 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
77.35 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam.bai
4.46 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bedgraph
12.55 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bed.gz
2.83 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.92 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_skipped.bam
13.29 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.tar.gz
473.20 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.fastq.gz
463.83 MB
report.txt
680 B
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_fastqc.zip
442.40 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl.fastq.gz
448.63 MB
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.fastq.gz
465.44 MB
fastqc
Directory
report.txt
680 B
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam.bai
19.21 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
194.12 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam
541.68 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.90 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.tar.gz
1.15 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.tar.gz
363.42 kB
Cutadapt (single-end)
report.txt
680 B
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.fastq.gz
472.25 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
195.42 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam
544.36 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.fastq.gz
194.12 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
60.04 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
78.74 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.60 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.fastq.gz
195.42 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
62.38 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
61.74 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
84.05 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam.bai
4.14 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.56 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
578.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
75.23 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam.bai
3.75 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
572.36 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
75.13 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.55 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.81 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.09 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bed.gz
2.71 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bedgraph
12.13 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_skipped.bam
13.29 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.tar.gz
1.15 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_skipped.bam
13.29 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.72 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bedgraph
11.79 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.22 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bed.gz
2.62 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
23.95 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.tar.gz
1.14 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.08 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.tar.gz
464.76 kB

STAU1_cortex:P0_WT_1-5U_after_D_20200610_FL

STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
335.46 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
880.27 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
311.01 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.42 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
838.04 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
141.50 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
80.06 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
80.83 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
57.40 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
133.32 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.67 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam
940.94 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam.bai
4.14 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.51 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_skipped.bam
13.27 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bedgraph
28.55 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bed.gz
6.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
16.64 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
67.15 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
472 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.tar.gz
1.79 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.tar.gz
403.94 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.fastq.gz
314.94 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.tar.gz
536.92 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.fastq.gz
717.44 MB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl.fastq.gz
707.09 MB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_fastqc.zip
447.72 kB
Cutadapt (single-end)
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.fastq.gz
722.02 MB
report.txt
679 B
fastqc
Directory
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.fastq.gz
335.46 MB
Cutadapt (single-end)
report.txt
679 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.fastq.gz
744.88 MB
fastqc
Directory
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
314.94 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
845.09 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.fastq.gz
311.01 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
94.98 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
66.46 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
67.29 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
69.50 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
70.27 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
101.81 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam.bai
4.01 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
127.66 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.61 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam
848.75 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam.bai
3.77 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.59 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
127.42 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam
831.73 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.00 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.26 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bed.gz
6.02 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bedgraph
27.64 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.tar.gz
1.78 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.05 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bed.gz
5.82 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.17 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bedgraph
26.89 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
56.93 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.tar.gz
530.45 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.tar.gz
1.77 MB

STAU1_cortex:P7_WT_1-5U_before_H_20200610_FL

STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
67.73 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam
185.53 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.fastq.gz
67.73 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
54.17 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
54.63 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.71 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
660.49 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
206.87 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
26.73 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
4.63 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.50 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bedgraph
3.93 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
1006.60 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bed.gz
978.71 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_skipped.bam
12.53 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
456 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
870.32 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.fastq.gz
152.23 MB
report.txt
680 B
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl.fastq.gz
150.85 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_fastqc.zip
458.14 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.fastq.gz
153.07 MB
report.txt
680 B
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam.bai
17.52 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
62.08 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam
176.33 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
683.45 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
7.18 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.tar.gz
299.83 kB
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.fastq.gz
158.38 MB
fastqc
Directory
report.txt
680 B
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam.bai
19.14 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
62.82 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam
177.66 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.fastq.gz
62.08 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.71 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
48.72 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
48.17 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.fastq.gz
62.82 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
49.46 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
59.39 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
49.95 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.18 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
639.88 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
185.53 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
3.54 MB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
2.96 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
182.38 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
634.48 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.12 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
870.95 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_skipped.bam
12.53 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
2.14 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bed.gz
842.55 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bedgraph
3.45 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
459 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
823.29 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
675.80 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
5.90 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
814.22 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_skipped.bam
12.53 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
1.69 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bed.gz
786.25 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bedgraph
3.26 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
460 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
783.34 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
671.85 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
5.87 kB

STAU1_cortex:5week_WT_1-5U_before_4_20200610_FL

Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.54 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
921.00 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
50.60 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam
106.67 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bw
221.19 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.02 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
102.24 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
59.95 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bw
7.95 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
130.33 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
18.52 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
605.66 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam.bai
4.39 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bedgraph
8.10 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bed.gz
1.82 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.99 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
1.90 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.02 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
462 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.tar.gz
362.20 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.tar.gz
441.92 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.tar.gz
448.29 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
683 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.fastq.gz
76.30 MB
FASTQ file (CLIP)
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl.fastq.gz
82.98 MB
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_fastqc.zip
466.07 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.fastq.gz
77.38 MB
report.txt
683 B
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bw
220.91 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam
93.79 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
42.72 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam.bai
18.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.fastq.gz
50.60 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
930.37 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.94 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
682 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.fastq.gz
84.92 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
43.64 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam
95.40 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bw
221.09 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.fastq.gz
42.72 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
47.45 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
66.56 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
48.19 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.fastq.gz
43.64 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
71.23 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
49.80 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
50.61 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.59 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
571.15 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bw
4.32 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam.bai
3.80 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
98.58 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bw
3.53 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
93.89 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.50 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
563.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam.bai
3.35 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bedgraph
7.72 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
1.80 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bed.gz
1.72 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
3.91 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1017.23 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bedgraph
7.53 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
3.23 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
1.75 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bed.gz
1.66 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.48 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
920.99 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
464 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1003.46 kB

STAU1_cortex:P7_WT_1-5U_after_G_20200610_FL

iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.fastq.gz
270.66 MB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.fastq.gz
284.09 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
75.24 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
127.47 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
74.51 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam
838.25 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
106.46 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam.bai
4.37 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_SJ.out.tab
2.01 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.19 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
36.25 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_skipped.bam
12.73 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.28 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bed.gz
4.15 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bedgraph
18.50 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.36 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.tar.gz
500.59 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.fastq.gz
668.75 MB
report.txt
679 B
FASTQ file (CLIP)
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_fastqc.zip
448.16 kB
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl.fastq.gz
648.91 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.tar.gz
1.38 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
62.17 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.tar.gz
385.29 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.fastq.gz
671.95 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
779.70 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
270.66 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.56 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.fastq.gz
684.24 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
804.26 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
284.09 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
273.43 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
784.73 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
84.81 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
62.55 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
63.11 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.fastq.gz
273.43 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.11 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
65.84 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
91.37 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam
801.40 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
104.39 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.98 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam.bai
4.17 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam
792.63 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
103.95 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam.bai
3.94 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.96 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.01 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bedgraph
17.45 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.96 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bed.gz
3.87 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_skipped.bam
12.73 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.tar.gz
1.37 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.83 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_skipped.bam
12.73 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bedgraph
16.84 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.15 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bed.gz
3.69 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.63 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.tar.gz
1.37 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.16 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.tar.gz
501.46 kB

STAU1_cortex:5week_WT_1-5U_before_6_20200610_FL

Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
34.69 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam
156.80 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
75.35 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam.bai
19.70 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.16 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.09 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.17 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
124.00 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.fastq.gz
75.35 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
937.29 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
4.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
176.45 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
27.18 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bed.gz
2.92 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bedgraph
13.02 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.48 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.04 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.16 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
36.00 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
494.32 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.fastq.gz
115.62 MB
report.txt
684 B
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl.fastq.gz
121.99 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_fastqc.zip
453.09 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
684 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.fastq.gz
116.98 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
67.46 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam.bai
19.28 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam
142.53 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.17 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
388.09 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.fastq.gz
124.70 MB
report.txt
683 B
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
68.60 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam
144.68 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
55.00 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
54.25 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
79.32 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.fastq.gz
67.46 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
57.71 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
85.58 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
56.93 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.fastq.gz
68.60 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.28 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
149.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
899.64 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
3.76 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
144.43 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
3.54 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
889.35 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.18 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bedgraph
12.20 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.82 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bed.gz
2.69 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.75 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bed.gz
2.60 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.12 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bedgraph
11.86 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.73 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.16 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.10 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
34.60 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
493.82 kB

STAU1_cortex:5week_Stau2KD_1-5U_before_1_20200610_FL

STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
222.61 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
109.45 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.70 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.19 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
54.76 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
71.42 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
70.19 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
127.89 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.fastq.gz
109.45 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
39.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_SJ.out.tab
1.23 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam
254.04 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.84 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.17 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bedgraph
18.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_skipped.bam
12.85 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
11.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bed.gz
3.98 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.tar.gz
1.40 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
410.04 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
532.36 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
688 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.fastq.gz
168.31 MB
Cutadapt (single-end)
report.txt
688 B
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.fastq.gz
169.97 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_fastqc.zip
446.83 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl.fastq.gz
172.79 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
207.34 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
101.06 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.63 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
55.67 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
688 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.fastq.gz
177.80 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
209.97 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
102.48 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
59.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
58.94 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
87.25 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.fastq.gz
101.06 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.fastq.gz
102.48 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
61.52 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
62.48 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
92.63 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.68 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
36.79 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam
220.68 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_SJ.out.tab
1.20 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.48 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam
213.81 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
36.68 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_SJ.out.tab
1.19 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bed.gz
3.88 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_skipped.bam
12.85 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.15 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.08 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bedgraph
17.86 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.tar.gz
1.39 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bedgraph
17.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_skipped.bam
12.85 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bed.gz
3.80 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.99 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.tar.gz
1.39 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.18 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
54.70 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
534.14 kB

STAU1_cortex:P0_WT_1-5U_after_E_20200610_FL

STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
796.83 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
298.31 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.tar.gz
521.97 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.fastq.gz
298.31 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
78.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
77.64 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
135.98 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.27 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
50.21 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.tar.gz
1.69 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
117.77 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam
808.70 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_SJ.out.tab
2.43 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam.bai
4.09 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.52 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bed.gz
5.78 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_skipped.bam
13.47 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.05 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bedgraph
26.41 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
51.60 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.tar.gz
401.26 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.tar.gz
527.72 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.fastq.gz
661.82 MB
report.txt
679 B
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl.fastq.gz
640.38 MB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_fastqc.zip
448.81 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.fastq.gz
664.91 MB
report.txt
679 B
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.tar.gz
1.69 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.49 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
774.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
287.09 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.fastq.gz
675.23 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
779.81 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
289.69 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.fastq.gz
287.09 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
91.67 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.08 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
65.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.fastq.gz
289.69 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
99.36 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.74 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.75 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_SJ.out.tab
2.39 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam.bai
3.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
114.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam
766.44 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_SJ.out.tab
2.38 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam.bai
3.72 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam
754.57 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
114.83 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bedgraph
26.03 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bed.gz
5.68 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.95 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
11.15 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_skipped.bam
13.46 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bedgraph
25.48 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.68 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bed.gz
5.53 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_skipped.bam
13.46 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.79 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.tar.gz
1.69 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
471 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.25 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
50.04 kB

STAU1_cortex:5week_Stau2KD_1-5U_before_5_20200610_FL

Cutadapt (single-end)
report.txt
688 B
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.fastq.gz
393.08 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
267.11 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam
521.06 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam.bai
19.70 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
171.95 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.41 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
479 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.fastq.gz
267.11 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
188.93 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
97.27 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
95.85 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
98.53 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam.bai
3.11 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_SJ.out.tab
2.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam
580.04 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
10.30 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_skipped.bam
13.58 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
24.81 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bed.gz
9.85 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bedgraph
46.11 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.tar.gz
2.21 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
478.82 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.tar.gz
2.20 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
635.10 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
689 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.fastq.gz
389.80 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_fastqc.zip
460.42 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl.fastq.gz
406.25 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
247.80 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam
482.08 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
0 B
Cutadapt (single-end)
report.txt
688 B
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.fastq.gz
413.07 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
176.08 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam
487.58 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
250.29 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
1.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.fastq.gz
247.80 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
114.54 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
72.83 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.06 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.fastq.gz
250.29 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.92 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
77.62 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
78.84 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
92.09 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam
507.58 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_SJ.out.tab
2.25 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam.bai
3.06 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_SJ.out.tab
2.23 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam
495.79 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
91.85 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam.bai
3.05 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bed.gz
9.66 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
10.11 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_skipped.bam
13.58 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bedgraph
45.41 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
19.83 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.tar.gz
2.20 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bed.gz
9.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
9.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bedgraph
44.93 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_skipped.bam
13.58 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
18.39 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
171.32 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
632.95 kB

STAU1_cortex:P7_WT_1-5U_after_F_20200610_FL

STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam
962.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
353.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_stats.txt
1.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.fastq.gz
353.29 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
75.12 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
75.93 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.63 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam
1.02 GB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam.bai
4.44 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
135.25 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_SJ.out.tab
2.45 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
52.66 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bed.gz
4.85 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bedgraph
22.17 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.02 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.35 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_skipped.bam
13.05 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.tar.gz
1.53 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.tar.gz
525.26 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.fastq.gz
815.46 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_fastqc.zip
442.65 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl.fastq.gz
781.92 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
52.91 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.tar.gz
403.19 kB
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.fastq.gz
817.29 MB
fastqc
Directory
report.txt
679 B
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
347.27 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam.bai
19.56 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam
948.41 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_SJ.out.tab
0 B
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.fastq.gz
823.40 MB
fastqc
Directory
report.txt
679 B
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam
951.53 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
348.65 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.fastq.gz
347.27 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
63.70 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
86.92 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
64.31 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.fastq.gz
348.65 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
66.27 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
93.11 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.92 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_SJ.out.tab
2.41 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam.bai
4.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam
1023.22 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
133.59 MB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
133.49 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam.bai
4.10 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_SJ.out.tab
2.39 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam
1016.38 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.87 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bedgraph
21.77 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_skipped.bam
13.05 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bed.gz
4.75 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.92 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.tar.gz
1.53 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_skipped.bam
13.05 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.92 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bedgraph
21.39 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.81 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bed.gz
4.64 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.tar.gz
1.53 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
52.55 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.tar.gz
509.98 kB

STAU1_cortex:P7_WT_1-5U_after_H_20200610_FL

STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam
1.51 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
560.81 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
542.46 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
138.47 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
79.91 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
80.75 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam.bai
4.86 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
205.68 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_SJ.out.tab
2.85 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam
1.63 GB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.10 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bed.gz
5.91 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_skipped.bam
13.61 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
15.99 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bedgraph
26.57 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.tar.gz
1.65 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
73.32 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
403.46 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.tar.gz
1.63 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
62.17 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.tar.gz
1.64 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
548.63 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_fastqc.zip
461.39 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl.fastq.gz
1.23 GB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.fastq.gz
1.23 GB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.fastq.gz
560.81 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
176.46 kB
Cutadapt (single-end)
report.txt
680 B
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.fastq.gz
1.24 GB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.fastq.gz
1.29 GB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
502.87 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam
1.42 GB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam
1.44 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
513.83 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.fastq.gz
513.83 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.fastq.gz
502.87 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
98.25 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
68.51 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
69.06 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
65.98 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
90.36 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.51 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam
1.48 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_SJ.out.tab
2.82 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
199.69 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam.bai
4.69 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam.bai
4.51 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam
1.45 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_SJ.out.tab
2.80 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
198.95 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_skipped.bam
13.61 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bedgraph
25.17 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
11.66 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bed.gz
5.54 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.73 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.13 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bedgraph
24.00 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bed.gz
5.21 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_skipped.bam
13.61 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.40 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.25 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
471 B

input_cortex:P7_WT_1.5U_H_20200723_FL

Cutadapt (single-end)
fastqc
Directory
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.fastq.gz
699.30 MB
report.txt
674 B
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.fastq.gz
717.29 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.tar.gz
1.14 MB
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
199.06 kB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
108.70 kB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
510.68 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.tar.gz
1.12 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
674 B
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.fastq.gz
765.07 MB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
717.29 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bw
221.80 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam
1.00 GB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_SJ.out.tab
0 B
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
503.70 kB
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
92.45 kB
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
112.78 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
242.63 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bed.gz
111.83 kB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
571.38 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam.bai
2.50 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam
1.22 GB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_SJ.out.tab
1.18 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.fastq.gz
680.15 MB
report.txt
674 B
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bedgraph
28.14 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
28.67 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.70 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_skipped.bam
15.12 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bed.gz
6.54 MB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.48 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
522.23 kB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam
885.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bw
221.60 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
638.79 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam
914.80 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
656.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bw
221.65 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.fastq.gz
638.79 MB
fastqc
Directory
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.63 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
122.50 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bed.gz
74.12 kB
iCLIP reads proxy
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.fastq.gz
656.66 MB
fastqc
Directory
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
143.06 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.94 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-p7-wt-1-5u-h-20200723-fl.fastq.gz
786.50 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_fastqc.zip
489.13 kB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
549.33 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_SJ.out.tab
1.08 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam.bai
2.39 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam
1014.79 MB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam.bai
2.34 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
547.68 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_SJ.out.tab
1.03 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.bam
952.12 MB
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bedgraph
26.55 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
20.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bed.gz
6.15 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_skipped.bam
15.14 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.31 MB
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_skipped.bam
15.13 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bed.gz
5.63 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bedgraph
24.57 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
16.67 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.79 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.tar.gz
1.09 MB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.42 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
473 B

STAU1_cortex:5week_WT_1-5U_after_4_20200610_FL

iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.fastq.gz
407.63 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
98.75 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
97.39 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
191.41 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_SJ.out.tab
2.83 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam
968.94 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam.bai
3.24 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
144.73 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bedgraph
55.15 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_skipped.bam
13.56 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
12.19 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bed.gz
11.68 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
29.97 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.40 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
263.14 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.45 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
256.09 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.40 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.tar.gz
648.88 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.tar.gz
657.62 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
683 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.fastq.gz
653.55 MB
FASTQ file (CLIP)
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl.fastq.gz
672.73 MB
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_fastqc.zip
453.01 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.tar.gz
491.21 kB
Cutadapt (single-end)
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.fastq.gz
660.30 MB
fastqc
Directory
report.txt
682 B
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam
804.21 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
370.54 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_SJ.out.tab
0 B
Cutadapt (single-end)
fastqc
Directory
report.txt
682 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.fastq.gz
695.21 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam
870.76 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
407.63 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
376.25 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam
814.99 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_stats.txt
1.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.fastq.gz
376.25 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.fastq.gz
370.54 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
115.10 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
73.98 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
72.79 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
79.46 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
127.28 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
78.30 kB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_SJ.out.tab
2.77 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam
833.07 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam.bai
3.16 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
131.51 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam.bai
3.14 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
130.87 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_SJ.out.tab
2.73 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam
805.88 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bed.gz
11.52 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
24.03 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_skipped.bam
13.56 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bedgraph
54.57 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
12.03 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bedgraph
53.82 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
21.38 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
11.83 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_skipped.bam
13.56 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bed.gz
11.32 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
255.22 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.44 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.39 MB

STAU1_cortex:5week_WT_1-5U_after_6_20200610_FL

iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
265.28 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
94.89 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
93.36 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
186.33 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
139.22 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
91.52 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam
653.25 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_SJ.out.tab
2.12 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam.bai
3.45 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bedgraph
36.85 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
22.24 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_skipped.bam
13.67 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bed.gz
7.97 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.31 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.tar.gz
2.01 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.tar.gz
462.15 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.tar.gz
1.99 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.tar.gz
610.22 kB
Cutadapt (single-end)
report.txt
683 B
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.fastq.gz
371.36 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl.fastq.gz
417.74 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_fastqc.zip
474.32 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
187.40 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.fastq.gz
377.68 MB
report.txt
683 B
Cutadapt (single-end)
report.txt
682 B
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.fastq.gz
426.39 MB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
458.57 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
214.72 MB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
539.26 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
265.28 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
220.27 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
468.09 MB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
220.27 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
68.39 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
69.24 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
106.53 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
214.72 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
117.64 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.29 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
73.16 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam
479.20 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_SJ.out.tab
2.05 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam.bai
3.33 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
79.34 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.85 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_SJ.out.tab
2.03 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam.bai
3.28 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam
457.73 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_skipped.bam
13.67 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bed.gz
7.60 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
16.31 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bedgraph
35.50 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.95 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bedgraph
34.60 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_skipped.bam
13.67 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.70 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bed.gz
7.36 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.25 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
137.68 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.34 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.tar.gz
605.89 kB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
795.78 MB
demux_nomatch_fastqc.zip
429.76 kB
fastqc
Directory

LEE956A1-A33_S22_L003_R1_001.fastq.gz

FASTQ file (single-end)
LEE956A1-A33_S22_L003_R1_001_fastqc.zip
531.12 kB
fastqc
Directory
stderr.txt
1.21 kB
LEE956A1-A33_S22_L003_R1_001.fastq.gz
16.62 GB

STAU1_cortex:P7_WT_1.5U_before_F_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
321.21 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
725.83 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.48 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
321.95 kB
FASTQ file (CLIP)
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq.fastq.gz
71.41 MB
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_fastqc.zip
459.36 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.fastq.gz
75.21 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam
89.11 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
32.08 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
220.60 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
32.08 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
51.13 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.95 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
68.52 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.fastq.gz
73.48 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
12.54 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam
98.11 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
405.70 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam.bai
3.93 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.54 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.33 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
630.71 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
642.63 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
748.49 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
607.46 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.50 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
333.67 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
16.89 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
30.67 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam
86.31 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
220.11 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.fastq.gz
73.81 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
30.93 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
220.27 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam
86.81 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
18.37 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
30.93 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.82 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.17 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.38 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
30.67 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.01 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
47.41 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
47.22 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
12.09 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam.bai
3.02 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
394.84 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam
92.34 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam
91.03 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
12.07 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
391.17 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.bam.bai
2.67 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.47 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
603.41 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.41 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
591.52 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
607.22 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
568.00 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.25 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
579.65 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.32 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.46 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
714.08 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B

STAU1_cortex:P7_WT_1.5U_before_G_20200610_FL_reseq

iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
688.54 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1018 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
582.86 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.12 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
584.48 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.fastq.gz
70.95 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.tar.gz
307.56 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
83.73 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
220.49 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
29.61 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.tar.gz
308.89 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
29.61 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
48.76 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
49.10 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
63.85 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.fastq.gz
69.90 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam
88.29 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam.bai
3.43 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bw
1.96 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
11.98 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
376.63 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
534.59 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.69 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
545.54 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.72 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.16 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
691.04 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.13 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.tar.gz
309.67 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.fastq.gz
70.10 MB
report.txt
685 B
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
17.10 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
220.07 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
28.85 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
81.98 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
220.22 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
82.31 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
18.16 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
28.99 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
28.85 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
52.76 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
45.22 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
45.48 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
28.99 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.35 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
54.41 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.07 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq.fastq.gz
67.27 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_fastqc.zip
462.64 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam.bai
2.84 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
371.49 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
11.64 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam
85.38 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam.bai
2.60 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
11.62 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.bam
84.55 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
370.16 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.72 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.11 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
520.71 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
531.52 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.26 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.10 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.08 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
522.43 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bed.gz
511.52 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.72 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.13 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1019 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
678.17 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
583.50 kB

STAU1_cortex:5week_WT_1.5U_before_6_20200610_FL_reseq

FASTQ file (CLIP)
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq.fastq.gz
9.12 MB
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_fastqc.zip
488.19 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
554.54 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1006 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
517.54 kB
Cutadapt (single-end)
report.txt
688 B
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.fastq.gz
9.30 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
517.83 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.45 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.83 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
11.75 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.83 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
30.75 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
30.63 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
48.24 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.tar.gz
151.04 kB
Cutadapt (single-end)
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.fastq.gz
8.54 MB
report.txt
689 B
fastqc
Directory
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam.bai
3.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bw
1.38 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam
14.11 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.38 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
100.20 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
319.58 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.09 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
325.26 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.25 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.15 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
16.82 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.09 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
10.55 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
575.33 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1009 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.tar.gz
152.53 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
517.75 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.fastq.gz
8.65 MB
report.txt
689 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
26.69 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
26.61 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
34.36 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.15 MB
fastqc
Directory
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
18.16 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
10.73 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.20 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.25 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
27.47 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
27.40 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
36.05 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.25 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam.bai
2.16 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.20 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
91.22 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam
11.04 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bw
771.64 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.21 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
92.30 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bw
862.79 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam.bai
2.31 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.bam
11.47 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
282.58 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
287.92 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.12 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
653.48 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
277.25 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
272.00 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
576.66 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
546.04 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1004 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.tar.gz
152.16 kB

STAU1_cortex:5week_WT_1.5U_after_4_20200610_FL_reseq

iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
902.72 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.94 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.fastq.gz
41.32 MB
report.txt
687 B
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
24.44 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bw
220.91 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam
52.16 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.53 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.06 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.30 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
24.44 MB
fastqc
Directory
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.tar.gz
391.79 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
765.63 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.fastq.gz
38.33 MB
report.txt
688 B
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam.bai
4.28 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bw
4.61 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
8.90 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam
64.12 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
406.68 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
4.03 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.15 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.07 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.17 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
764.74 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
917.80 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.99 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.fastq.gz
38.80 MB
report.txt
688 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.tar.gz
397.21 kB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam.bai
19.07 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam
47.49 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bw
220.73 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.80 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bw
220.83 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam.bai
19.56 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
22.19 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam
48.19 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
41.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
57.57 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
41.71 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
21.80 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
61.40 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
43.68 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
43.46 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
22.19 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bw
2.84 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
380.06 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam
52.08 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.92 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam.bai
3.47 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq.fastq.gz
40.08 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_fastqc.zip
478.28 kB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam.bai
3.08 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
374.16 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bw
2.41 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam
49.84 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.88 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.14 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.50 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.95 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.12 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.86 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.13 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.09 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.11 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
763.45 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
896.78 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.92 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.tar.gz
395.13 kB

STAU1_cortex:5week_Stau2KD_1.5U_after_1_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
348.53 kB
FASTQ file (CLIP)
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_fastqc.zip
488.79 kB
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq.fastq.gz
27.07 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
832.59 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.99 kB
Cutadapt (single-end)
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.fastq.gz
27.73 MB
fastqc
Directory
report.txt
692 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bw
220.88 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam
35.14 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
17.49 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.14 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.40 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.88 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
17.49 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
355.95 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam.bai
4.21 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
6.28 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bw
3.78 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam
45.92 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
302.14 kB
Cutadapt (single-end)
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.fastq.gz
25.09 MB
report.txt
693 B
fastqc
Directory
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
925.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.79 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
908.38 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.26 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.14 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
855.16 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
703.23 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
364.67 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.fastq.gz
25.55 MB
report.txt
693 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bw
220.59 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.04 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam
31.11 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.46 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bw
220.67 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam
31.80 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam.bai
19.42 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.65 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
40.47 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
40.67 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.46 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.04 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
39.17 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.95 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
38.93 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam
35.44 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam.bai
3.29 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.60 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
284.85 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bw
2.29 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bw
1.91 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam
33.41 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.bam.bai
2.87 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
280.76 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.57 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.59 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.91 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
851.38 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
869.05 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
695.03 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.47 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
835.97 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.bed.gz
818.59 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.59 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
819.95 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.94 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
695.14 kB

input_cortex:5week_WT_1.5U_6_20200723_FL

Cutadapt (single-end)
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.fastq.gz
795.51 MB
report.txt
677 B
fastqc
Directory
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.tar.gz
514.54 kB
FASTQ file (CLIP)
input-cortex-5week-wt-1-5u-6-20200723-fl.fastq.gz
957.65 MB
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_fastqc.zip
491.91 kB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
171.24 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.tar.gz
1.22 MB
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
124.07 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.fastq.gz
909.08 MB
report.txt
677 B
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam
1.18 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
873.04 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bw
221.83 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.fastq.gz
873.04 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bed.gz
112.68 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
113.30 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
246.87 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.tar.gz
529.14 kB
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam
1.48 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam.bai
2.47 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
715.42 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_SJ.out.tab
1.36 MB
iCount RNA-maps
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.tar.gz
1.20 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bed.gz
6.57 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.69 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bedgraph
28.45 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_skipped.bam
15.60 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
29.01 MB
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.47 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.tar.gz
535.45 kB
Cutadapt (single-end)
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.fastq.gz
817.58 MB
fastqc
Directory
report.txt
678 B
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam
1.00 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bw
221.60 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
766.95 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
787.25 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bw
221.63 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam
1.04 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.fastq.gz
787.25 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.00 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
143.71 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.50 kB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bed.gz
74.21 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.65 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
122.88 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.fastq.gz
766.95 MB
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam.bai
2.34 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
681.72 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_SJ.out.tab
1.25 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam
1.14 GB
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam
1.06 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_SJ.out.tab
1.20 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.bam.bai
2.26 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
679.63 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bedgraph
27.11 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bed.gz
6.24 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
20.60 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_skipped.bam
15.61 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.36 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bedgraph
25.28 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_skipped.bam
15.62 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bed.gz
5.76 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
16.27 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.88 MB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
111.39 kB
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
iCount RNA-maps
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.tar.gz
1.19 MB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
fastqc
Directory
demux_nomatch_fastqc.zip
448.71 kB
demux_nomatch.fastq.gz
830.60 MB

LEE1302A2-A36_S32_L004_R1_001.fastq.gz

FASTQ file (single-end)
fastqc
Directory
LEE1302A2-A36_S32_L004_R1_001_fastqc.zip
542.87 kB
stderr.txt
1.23 kB
LEE1302A2-A36_S32_L004_R1_001.fastq.gz
16.37 GB

STAU1_cortex:5week_WT_1.5U_before_4_20200610_FL_reseq

FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq.fastq.gz
6.76 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_fastqc.zip
525.38 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
424.70 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
449 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.30 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
460.84 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
464.06 kB
Cutadapt (single-end)
report.txt
688 B
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.fastq.gz
6.64 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
463.52 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
4.38 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam
8.41 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bw
220.29 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
27.33 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
40.97 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
27.26 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
4.38 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.tar.gz
143.97 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
62.11 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bw
1.29 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam.bai
3.11 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.14 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam
11.20 MB
Cutadapt (single-end)
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.fastq.gz
5.86 MB
fastqc
Directory
report.txt
689 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.01 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
202.86 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
199.15 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
787.63 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.fastq.gz
5.94 MB
report.txt
689 B
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
437.18 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1001 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
449 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.29 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.tar.gz
143.04 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bw
219.94 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam
7.24 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam.bai
17.38 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.66 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam.bai
18.09 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.73 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam
7.37 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bw
220.03 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
3.73 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
24.00 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
23.96 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
31.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
30.25 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
23.15 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
23.11 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
3.66 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam.bai
2.09 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bw
641.91 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.84 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam
7.95 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
54.36 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
187.44 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
463.48 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
183.91 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
732.99 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam.bai
1.93 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.83 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam
7.55 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
53.37 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bw
547.99 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
713.35 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
178.49 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
181.95 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
388.45 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
994 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
422.71 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.30 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.tar.gz
144.28 kB

STAU1_cortex:P0_WT_1.5U_before_E_20200610_FL_reseq

Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.fastq.gz
28.12 MB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq.fastq.gz
27.05 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_fastqc.zip
469.81 kB
fastqc
Directory
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
623.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1012 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
531.61 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
532.29 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.fastq.gz
28.50 MB
report.txt
685 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
75.96 kB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.72 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam
33.86 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bw
220.15 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam.bai
19.07 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
75.92 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
12.72 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
41.16 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
52.36 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
41.34 kB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bw
1.23 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam
34.37 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
216.39 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam.bai
2.77 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.25 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.01 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.48 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
375.06 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
382.45 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.fastq.gz
28.19 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1007 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
627.69 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
76.48 kB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bw
219.94 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam.bai
15.84 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam
33.20 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.44 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam.bai
16.82 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bw
220.02 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.49 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam
33.32 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
38.97 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
44.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
38.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
12.44 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
39.32 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
39.55 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
45.80 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
12.49 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
211.75 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bw
1012.17 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam
33.11 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.16 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam.bai
2.39 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
210.85 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bw
952.91 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.16 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam.bai
2.30 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam
32.83 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
368.49 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
820.61 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.46 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
375.80 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
773.58 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
371.85 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
364.57 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.45 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
529.13 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
618.23 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB

STAU1_cortex:P7_WT_1.5U_before_H_20200610_FL_reseq

iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1001 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
417.35 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.57 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
460.97 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
463.83 kB
Cutadapt (single-end)
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.fastq.gz
27.38 MB
fastqc
Directory
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
67.21 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
32.34 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
220.21 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
19.35 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.49 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
68.63 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
12.49 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
39.17 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
39.38 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
50.07 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.fastq.gz
25.97 MB
report.txt
685 B
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam
37.50 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bw
1.78 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam.bai
3.64 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
161.76 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.36 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
926.72 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.50 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
245.91 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
242.32 kB
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.fastq.gz
26.17 MB
fastqc
Directory
report.txt
685 B
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1007 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
454.82 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.59 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
137.30 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
11.17 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
219.63 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
13.87 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
30.25 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
30.56 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
16.96 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
219.88 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
11.36 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
11.36 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
36.67 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
36.47 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
41.71 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
11.17 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
35.57 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
35.77 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
39.78 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bw
752.56 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam.bai
2.31 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
4.97 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
150.62 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam
32.01 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq.fastq.gz
26.22 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_fastqc.zip
479.38 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
197.42 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
755.47 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
194.08 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
631.29 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
148.47 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam
31.13 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
4.96 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bw
558.46 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam.bai
1.96 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
177.29 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
472.64 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
695.79 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
180.51 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
463.35 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
403.88 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
450 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.57 kB

input_cortex:P0_WT_1.5U_A_20200723_FL

STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam
628.33 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
415.52 MB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_fastqc.zip
490.69 kB
input-cortex-p0-wt-1-5u-a-20200723-fl.fastq.gz
492.41 MB
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
99.60 kB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
76.15 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.tar.gz
1.26 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
674 B
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.fastq.gz
471.38 MB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bed.gz
108.48 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
109.10 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
233.53 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.fastq.gz
415.52 MB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.tar.gz
509.69 kB
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam.bai
2.65 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_SJ.out.tab
1.15 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
300.64 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam
799.36 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.fastq.gz
415.25 MB
report.txt
674 B
fastqc
Directory
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bedgraph
33.80 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
28.62 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_skipped.bam
13.88 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_reads_single.bed.gz
7.82 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bed.gz
7.65 MB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.47 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.tar.gz
519.80 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.tar.gz
1.27 MB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.fastq.gz
427.72 MB
report.txt
674 B
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
365.60 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bw
221.52 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam
534.10 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam
553.17 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bw
221.60 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
376.85 MB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bed.gz
73.45 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
122.97 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
73.87 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.fastq.gz
365.60 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.fastq.gz
376.85 MB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
141.55 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.20 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
81.71 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam
638.35 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
283.49 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_SJ.out.tab
1.06 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam.bai
2.56 MB
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
282.39 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam.bai
2.54 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_SJ.out.tab
1.02 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.bam
590.79 MB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bedgraph
32.81 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bed.gz
7.40 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
21.61 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_reads_single.bed.gz
7.57 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_skipped.bam
13.87 kB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_skipped.bam
13.87 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bedgraph
31.19 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_reads_single.bed.gz
7.15 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
17.53 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.bed.gz
6.98 MB
iCount RNA-maps
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.tar.gz
1.24 MB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
69.97 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.tar.gz
504.63 kB

No Sample

iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
474 B
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
445.27 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
921.00 kB
STAR
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
415.52 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam
628.33 MB
iCount summary
5week_Stau2KD_1_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_Stau2KD_1_grouped_cdna_summary_gene.tsv
1.45 MB
5week_Stau2KD_1_grouped_cdna_summary_type.tsv
445 B
Cutadapt (single-end)
fastqc
Directory
report.txt
683 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.fastq.gz
421.55 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_fastqc.zip
446.83 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl.fastq.gz
172.79 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.fastq.gz
92.24 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
682 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.fastq.gz
644.92 MB
iCount summary
P0_WT_D_grouped_cdna_summary_type.tsv
444 B
P0_WT_D_grouped_cdna_summary_gene.tsv
1.44 MB
P0_WT_D_grouped_cdna_summary_subtype.tsv
1.00 kB
iCount summary
P0_WT_E_grouped_cdna_summary_subtype.tsv
1021 B
P0_WT_E_grouped_cdna_summary_type.tsv
441 B
P0_WT_E_grouped_cdna_summary_gene.tsv
1.37 MB
iCount summary
5week_WT_2_grouped_cdna_summary_type.tsv
440 B
5week_WT_2_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_WT_2_grouped_cdna_summary_gene.tsv
1.47 MB
iCount annotate
P0_WT_D_grouped_cdna_annotated.bed.gz
11.14 MB
P0_WT_D_grouped_cdna_annotated.bedgraph
45.75 MB
iCount summary
5week_WT_4_grouped_cdna_summary_type.tsv
442 B
5week_WT_4_grouped_cdna_summary_gene.tsv
1.50 MB
5week_WT_4_grouped_cdna_summary_subtype.tsv
1.01 kB
iCount summary
5week_WT_6_grouped_cdna_summary_subtype.tsv
1.00 kB
5week_WT_6_grouped_cdna_summary_type.tsv
439 B
5week_WT_6_grouped_cdna_summary_gene.tsv
1.45 MB
iCount annotate
5week_WT_6_grouped_cdna_annotated.bed.gz
11.40 MB
5week_WT_6_grouped_cdna_annotated.bedgraph
47.04 MB
iCount annotate
5week_Stau2KD_1_grouped_cdna_annotated.bedgraph
52.13 MB
5week_Stau2KD_1_grouped_cdna_annotated.bed.gz
12.50 MB
Paraclu
5week_WT_6_grouped_cdna_peaks.bed.gz
246.50 kB
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
105.01 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam
962.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
353.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_stats.txt
1.79 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
796.83 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
298.31 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
iCount RNA-maps
5week_Stau2KD_5_grouped_cdna.tar.gz
2.41 MB
Paraclu
5week_Stau2KD_5_grouped_cdna_peaks.bed.gz
230.27 kB
PEKA
4mer analysis of P0_WT_A_grouped_cdna.tar.gz
586.27 kB
iCount annotate
5week_Stau2KD_5_grouped_cdna_annotated.bed.gz
13.21 MB
5week_Stau2KD_5_grouped_cdna_annotated.bedgraph
55.05 MB
PEKA
4mer analysis of P0_WT_E_grouped_cdna.tar.gz
573.37 kB
PEKA
4mer analysis of 5week_Stau2KD_5_grouped_cdna.tar.gz
658.33 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam
1.51 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
560.81 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
166.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
86.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
88.12 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
PEKA
4mer analysis of 5week_Stau2KD_1_grouped_cdna.tar.gz
653.56 kB
iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
473 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.57 MB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.60 MB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
144.66 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam
517.70 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
182.20 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_skipped.bam
13.96 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
18.38 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bedgraph
17.51 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bed.gz
4.20 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.28 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
730.86 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
311.04 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
265.28 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.54 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.tar.gz
284.72 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam
555.68 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
201.09 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
34.69 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.tar.gz
548.20 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.tar.gz
521.97 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.tar.gz
459.80 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
321.21 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.tar.gz
362.99 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.tar.gz
606.89 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.tar.gz
67.19 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.tar.gz
449.32 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.tar.gz
173.69 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
335.46 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
880.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.79 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.tar.gz
352.39 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
331.15 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
222.61 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
109.45 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.70 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
348.53 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam
156.80 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
75.35 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam.bai
19.70 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
429.74 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.82 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
118.51 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam
281.18 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
336.41 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
456.24 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.tar.gz
165.00 kB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.tar.gz
480.53 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
542.46 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
472 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.13 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.16 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
50.60 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam
106.67 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bw
221.19 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam
400.45 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
148.80 MB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.tar.gz
514.54 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.20 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
267.11 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam
521.06 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam.bai
19.70 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.10 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.04 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam
187.94 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
92.24 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_SJ.out.tab
0 B
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.20 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.18 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
31.59 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
67.73 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam
185.53 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam
183.81 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
24.52 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam.bai
4.22 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_SJ.out.tab
768.77 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bw
11.18 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.19 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
94.89 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
93.36 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
186.33 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam
529.23 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
201.20 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam.bai
19.70 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
54.76 kB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.fastq.gz
299.54 MB
fastqc
Directory
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.fastq.gz
284.09 MB
fastqc
Directory
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.fastq.gz
407.63 MB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.tar.gz
517.88 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.fastq.gz
353.29 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
177.14 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
91.95 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
89.92 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
98.75 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
97.39 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
191.41 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
75.24 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
127.47 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
74.51 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.fastq.gz
298.31 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
75.12 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
75.93 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.63 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.06 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
20.02 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq.fastq.gz
30.62 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_fastqc.zip
461.34 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
171.95 kB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq.fastq.gz
27.05 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_fastqc.zip
469.81 kB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.86 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
150.26 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
82.04 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
78.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
77.64 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
135.98 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.fastq.gz
311.04 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq.fastq.gz
6.76 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_fastqc.zip
525.38 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.41 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
479 B
FASTQ file (CLIP)
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq.fastq.gz
9.12 MB
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_fastqc.zip
488.19 kB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq.fastq.gz
78.20 MB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_fastqc.zip
465.92 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
71.42 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
70.19 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
127.89 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq.fastq.gz
14.27 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_fastqc.zip
511.62 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.fastq.gz
109.45 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
720.62 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1012 B
FASTQ file (CLIP)
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_fastqc.zip
488.79 kB
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq.fastq.gz
27.07 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
FASTQ file (CLIP)
fastqc
Directory
demux_nomatch_fastqc.zip
448.71 kB
demux_nomatch.fastq.gz
830.60 MB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_fastqc.zip
481.19 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl.fastq.gz
650.74 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.09 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.17 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
124.00 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.fastq.gz
75.35 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
592.25 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
138.47 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
79.91 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
80.75 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.65 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
141.50 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
80.06 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
80.83 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.27 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
50.21 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
987.15 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.02 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
102.24 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
59.95 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.fastq.gz
267.11 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1001 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
417.35 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_fastqc.zip
477.73 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl.fastq.gz
741.20 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.92 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.57 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam.bai
3.41 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam
577.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_SJ.out.tab
2.14 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
86.76 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.09 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
460.97 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.06 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.tar.gz
1.69 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.03 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
119.80 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
66.77 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.fastq.gz
67.73 MB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.tar.gz
1.10 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
139.22 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.fastq.gz
182.20 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
188.93 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
97.27 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
95.85 kB
FASTQ file (CLIP)
input-cortex-5week-wt-1-5u-6-20200723-fl.fastq.gz
957.65 MB
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_fastqc.zip
491.91 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
54.17 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
54.63 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.71 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
424.70 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
449 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
91.52 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam
653.25 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_SJ.out.tab
2.12 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam.bai
3.45 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.30 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.fastq.gz
201.09 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.10 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
103.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.50 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
623.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1012 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.64 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.56 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.05 kB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
171.24 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.tar.gz
1.22 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
460.84 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.02 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
103.63 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.03 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-wt-1-5u-4-20200723-fl_fastqc.zip
498.21 kB
input-cortex-5week-wt-1-5u-4-20200723-fl.fastq.gz
672.35 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
69.50 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.22 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_premapped_to_ncRNAs_single.bed.gz
68.72 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.fastq.gz
148.80 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.fastq.gz
201.20 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
531.61 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
116.77 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
70.89 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_single.bed.gz
70.10 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.67 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bed.gz
2.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.84 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bedgraph
11.22 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
859.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
460 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.14 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam
838.25 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
106.46 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam.bai
4.37 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_SJ.out.tab
2.01 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
117.77 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam
808.70 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_SJ.out.tab
2.43 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam.bai
4.09 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
450 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
493.26 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.28 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_SJ.out.tab
2.15 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam.bai
3.40 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam
660.00 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
102.15 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
718.90 kB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
312.99 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
487.15 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
57.40 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam
1.02 GB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam.bai
4.44 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
135.25 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_SJ.out.tab
2.45 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_SJ.out.tab
2.83 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam
968.94 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam.bai
3.24 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
144.73 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1010 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
686.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.27 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.tar.gz
792.53 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam.bai
3.79 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam
806.60 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
128.31 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_SJ.out.tab
2.54 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
133.32 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.67 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam
940.94 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam.bai
4.14 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
33.60 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
212.75 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
1007.69 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
4.07 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.19 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
36.25 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam.bai
4.86 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
205.68 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_SJ.out.tab
2.85 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam
1.63 GB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.fastq.gz
717.29 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1019 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
825.17 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.03 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
39.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_SJ.out.tab
1.23 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam
254.04 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.84 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.tar.gz
1.14 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bw
7.95 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
130.33 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
18.52 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
605.66 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam.bai
4.39 MB
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
199.06 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
688.04 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
937.29 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
4.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
176.45 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
27.18 MB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
660.49 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
206.87 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
26.73 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
4.63 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
52.66 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
98.53 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam.bai
3.11 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_SJ.out.tab
2.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam
580.04 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.39 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
146.24 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
604.17 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
77.35 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam.bai
4.46 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.fastq.gz
118.51 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
4.38 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.43 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
70.89 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
543.95 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_SJ.out.tab
1.26 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.98 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
48.88 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
311.44 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
FASTQ file (CLIP)
input-cortex-p7-wt-1-5u-f-20200723-fl.fastq.gz
705.17 MB
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_fastqc.zip
489.90 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bedgraph
36.85 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
22.24 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_skipped.bam
13.67 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bed.gz
7.97 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.31 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.tar.gz
2.01 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bed.gz
7.93 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_skipped.bam
13.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
20.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bedgraph
36.95 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.30 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
406.91 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
452 B
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
396.57 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam.bai
4.09 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_SJ.out.tab
1.50 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
59.36 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.05 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_skipped.bam
12.73 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.28 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bed.gz
4.15 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single.bedgraph
18.50 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.36 MB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
79.57 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
546.13 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam.bai
4.12 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.00 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bedgraph
37.19 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bed.gz
8.07 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
20.20 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.56 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.fastq.gz
311.01 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
836.40 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.tar.gz
1.06 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
464.73 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.52 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bed.gz
5.78 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_skipped.bam
13.47 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.05 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bedgraph
26.41 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.10 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
339.36 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
51.60 kB
FASTQ file (CLIP)
input-cortex-p0-wt-1-5u-e-20200723-fl_fastqc.zip
487.91 kB
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl.fastq.gz
825.99 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bedgraph
55.15 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_skipped.bam
13.56 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
12.19 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.bed.gz
11.68 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
29.97 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.40 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
902.72 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bed.gz
7.16 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
15.28 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.45 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bedgraph
33.12 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.17 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bedgraph
18.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_skipped.bam
12.85 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
11.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bed.gz
3.98 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bed.gz
4.85 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.bedgraph
22.17 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.02 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.35 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_skipped.bam
13.05 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.94 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single.tar.gz
1.53 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bed.gz
2.92 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bedgraph
13.02 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.48 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.04 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
41.96 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
863.54 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.51 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_skipped.bam
13.27 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bedgraph
28.55 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.bed.gz
6.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
16.64 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bedgraph
8.10 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bed.gz
1.82 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.99 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
1.90 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.71 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
67.15 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.22 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bedgraph
12.93 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bed.gz
2.88 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.07 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
794.49 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.50 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bedgraph
3.93 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
1006.60 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bed.gz
978.71 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_skipped.bam
12.53 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.53 kB
FASTQ file (CLIP)
input-cortex-p0-wt-1-5u-d-20200723-fl.fastq.gz
864.08 MB
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_fastqc.zip
491.72 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
292.09 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bed.gz
2.45 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_skipped.bam
12.61 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.54 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bedgraph
10.92 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.74 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
10.30 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_skipped.bam
13.58 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
24.81 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bed.gz
9.85 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bedgraph
46.11 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.98 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bedgraph
12.79 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.50 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_skipped.bam
12.68 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bed.gz
2.86 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.01 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.tar.gz
2.21 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
648.25 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1011 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
710.76 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_skipped.bam
12.52 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.13 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.18 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bed.gz
3.03 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bedgraph
13.61 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
6.10 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bed.gz
5.91 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_skipped.bam
13.61 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
15.99 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bedgraph
26.57 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
158.39 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bedgraph
12.55 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bed.gz
2.83 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
8.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.92 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_skipped.bam
13.29 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.18 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.tar.gz
370.36 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.41 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.40 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bedgraph
19.16 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bed.gz
4.26 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.42 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_skipped.bam
13.21 kB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
219.67 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.tar.gz
572.79 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.89 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
263.14 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_fastqc.zip
490.69 kB
input-cortex-p0-wt-1-5u-a-20200723-fl.fastq.gz
492.41 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.92 MB
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
464 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.16 MB
Paraclu
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_peaks.bed.gz
47.04 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
36.00 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
444.52 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.08 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
464 B
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.02 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
462 B
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
472 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.tar.gz
1.79 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.tar.gz
1.40 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.15 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
20.10 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.tar.gz
1.08 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.79 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
456 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
870.32 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
17.06 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.tar.gz
1.65 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.tar.gz
457.15 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.13 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.29 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
73.32 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.tar.gz
462.15 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
33.90 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.tar.gz
401.26 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
410.04 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.tar.gz
362.20 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
385.02 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.tar.gz
403.94 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
346.81 kB
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
99.60 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
348.39 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
403.46 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
353.92 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.tar.gz
382.87 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
478.82 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
725.83 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.48 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
321.95 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
744.03 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1016 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.23 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
832.59 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.99 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
628.22 kB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
76.15 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.45 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
256.09 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
951.81 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
iCount RNA-maps
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.tar.gz
1.26 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
9.39 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
Paraclu
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_peaks.bed.gz
93.64 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.40 MB
iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
477 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
163.11 kB
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
170.62 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
688.54 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1018 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
582.86 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.12 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
554.54 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1006 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
517.54 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.09 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
365.76 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.62 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
948.12 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
822.26 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.41 kB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
141.18 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
868.81 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.58 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.14 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.35 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
138.27 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
797.56 kB
iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.48 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
113.87 kB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
108.70 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.14 MB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
510.68 kB
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.46 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
124.07 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.tar.gz
1.12 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_fastqc.zip
464.23 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq.fastq.gz
122.44 MB
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_peaks.bed.gz
78.08 kB
iCount RNA-maps
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.tar.gz
982.95 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.36 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
974.68 kB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
89.95 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
374.61 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq.fastq.gz
53.50 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_fastqc.zip
461.03 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
347.90 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
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Paraclu
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Paraclu
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Paraclu
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STAR
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PEKA
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STAR
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STAR
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STAR
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9.46 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.00 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
25.12 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bw
220.68 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam
67.12 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.fastq.gz
314.94 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam
127.67 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
44.66 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
75.96 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
67.21 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam
97.81 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
220.80 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
37.61 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
252.73 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
91.99 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.tar.gz
1.64 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam
33.27 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bw
221.00 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam
16.36 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
8.16 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
220.61 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.45 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.83 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
11.75 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.83 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
463.52 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.52 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
4.38 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam
8.41 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bw
220.29 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
290.75 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam.bai
18.93 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam
6.49 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.37 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bw
220.18 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.84 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
98.66 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
42.04 MB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
32.34 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
220.21 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
19.35 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.49 MB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
127.21 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.tar.gz
1.48 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.72 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam
33.86 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bw
220.15 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam.bai
19.07 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
83.73 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
220.49 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
29.61 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam
89.11 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
32.08 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
220.60 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
39.11 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.75 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.46 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
22.23 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
58.14 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
220.48 kB
iCLIP reads proxy
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.fastq.gz
601.64 MB
fastqc
Directory
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
503.70 kB
Paraclu
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_peaks.bed.gz
92.45 kB
iCount xlsites
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103.44 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bed.gz
102.76 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
226.96 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
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4.90 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bed.gz
87.71 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
191.39 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
88.29 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.fastq.gz
346.52 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.fastq.gz
697.56 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
230.74 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
105.95 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
106.68 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.tar.gz
568.55 kB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
227.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bed.gz
102.32 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
102.98 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.fastq.gz
457.16 MB
iCount xlsites
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108.67 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
232.83 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
109.57 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.fastq.gz
873.04 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_single.bed.gz
112.68 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
113.30 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
246.87 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
554.22 kB
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
112.78 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
242.63 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bed.gz
111.83 kB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bed.gz
115.31 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
116.19 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
251.82 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.fastq.gz
621.23 MB
iCount xlsites
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47.58 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
29.15 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
29.30 kB
Paraclu
P7_WT_F_grouped_cdna_peaks.bed.gz
95.43 kB
iCount RNA-maps
P7_WT_F_grouped_cdna.tar.gz
1.88 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
5.53 MB
PEKA
4mer analysis of P7_WT_F_grouped_cdna.tar.gz
578.05 kB
iCount group
P7_WT_F_grouped_cdna.bed.gz
7.21 MB
P7_WT_F_grouped_cdna.bedgraph
33.31 MB
P7_WT_F_grouped_reads.bed.gz
7.46 MB
iCount summary
P7_WT_G_grouped_cdna_summary_subtype.tsv
1.00 kB
P7_WT_G_grouped_cdna_summary_gene.tsv
1.32 MB
P7_WT_G_grouped_cdna_summary_type.tsv
437 B
Paraclu
P7_WT_G_grouped_cdna_peaks.bed.gz
95.67 kB
iCount RNA-maps
P7_WT_G_grouped_cdna.tar.gz
1.72 MB
iCount group
P7_WT_G_grouped_reads.bed.gz
6.42 MB
P7_WT_G_grouped_cdna.bedgraph
28.32 MB
P7_WT_G_grouped_cdna.bed.gz
6.22 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.14 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.40 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
73.88 kB
iCount RNA-maps
P7_WT_H_grouped_cdna.tar.gz
1.74 MB
Paraclu
P7_WT_H_grouped_cdna_peaks.bed.gz
190.41 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
17.49 MB
PEKA
4mer analysis of P7_WT_H_grouped_cdna.tar.gz
565.90 kB
iCount summary
P7_WT_F_grouped_cdna_summary_gene.tsv
1.34 MB
P7_WT_F_grouped_cdna_summary_subtype.tsv
1023 B
P7_WT_F_grouped_cdna_summary_type.tsv
441 B
iCount annotate
P7_WT_F_grouped_cdna_annotated.bed.gz
8.13 MB
P7_WT_F_grouped_cdna_annotated.bedgraph
33.31 MB
iCount group
P7_WT_H_grouped_cdna.bedgraph
29.49 MB
P7_WT_H_grouped_reads.bed.gz
6.73 MB
P7_WT_H_grouped_cdna.bed.gz
6.53 MB
iCount group
P0_WT_A_grouped_cdna.bed.gz
9.59 MB
P0_WT_A_grouped_cdna.bedgraph
44.74 MB
P0_WT_A_grouped_reads.bed.gz
9.96 MB
iCount xlsites
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bed.gz
108.48 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
109.10 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
233.53 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.fastq.gz
415.52 MB
iCount RNA-maps
P0_WT_D_grouped_cdna.tar.gz
2.25 MB
Paraclu
P0_WT_D_grouped_cdna_peaks.bed.gz
140.24 kB
PEKA
4mer analysis of P0_WT_D_grouped_cdna.tar.gz
603.33 kB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
120.48 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
121.21 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
261.71 kB
iCount annotate
P7_WT_G_grouped_cdna_annotated.bedgraph
28.32 MB
P7_WT_G_grouped_cdna_annotated.bed.gz
7.02 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
47.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
47.91 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.19 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount annotate
P0_WT_E_grouped_cdna_annotated.bed.gz
9.48 MB
P0_WT_E_grouped_cdna_annotated.bedgraph
38.91 MB
iCLIP reads proxy
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
733.15 MB
fastqc
Directory
iCount RNA-maps
P0_WT_E_grouped_cdna.tar.gz
2.05 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
18.91 MB
Paraclu
P0_WT_E_grouped_cdna_peaks.bed.gz
93.59 kB
iCount group
P0_WT_E_grouped_reads.bed.gz
8.79 MB
P0_WT_E_grouped_cdna.bedgraph
38.91 MB
P0_WT_E_grouped_cdna.bed.gz
8.40 MB
iCount annotate
5week_WT_2_grouped_cdna_annotated.bed.gz
11.59 MB
5week_WT_2_grouped_cdna_annotated.bedgraph
47.76 MB
iCount RNA-maps
5week_WT_2_grouped_cdna.tar.gz
2.27 MB
Paraclu
5week_WT_2_grouped_cdna_peaks.bed.gz
278.97 kB
PEKA
4mer analysis of 5week_WT_2_grouped_cdna.tar.gz
643.31 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.53 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.06 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.30 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
iCount group
5week_WT_2_grouped_cdna.bed.gz
10.30 MB
5week_WT_2_grouped_reads.bed.gz
10.92 MB
5week_WT_2_grouped_cdna.bedgraph
47.76 MB
iCount annotate
P7_WT_H_grouped_cdna_annotated.bedgraph
29.49 MB
P7_WT_H_grouped_cdna_annotated.bed.gz
7.36 MB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
24.44 MB
fastqc
Directory
iCount annotate
5week_WT_4_grouped_cdna_annotated.bed.gz
14.48 MB
5week_WT_4_grouped_cdna_annotated.bedgraph
60.85 MB
iCount RNA-maps
5week_WT_4_grouped_cdna.tar.gz
2.52 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
36.58 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
36.43 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
59.46 kB
Paraclu
5week_WT_4_grouped_cdna_peaks.bed.gz
293.24 kB
PEKA
4mer analysis of 5week_WT_4_grouped_cdna.tar.gz
672.91 kB
iCount group
5week_WT_4_grouped_cdna.bed.gz
12.89 MB
5week_WT_4_grouped_cdna.bedgraph
60.85 MB
5week_WT_4_grouped_reads.bed.gz
13.45 MB
iCount summary
P7_WT_H_grouped_cdna_summary_subtype.tsv
1016 B
P7_WT_H_grouped_cdna_summary_type.tsv
432 B
P7_WT_H_grouped_cdna_summary_gene.tsv
1.33 MB
iCount RNA-maps
5week_WT_6_grouped_cdna.tar.gz
2.27 MB
PEKA
4mer analysis of 5week_WT_6_grouped_cdna.tar.gz
644.03 kB
iCount RNA-maps
P0_WT_A_grouped_cdna.tar.gz
2.22 MB
iCount annotate
P0_WT_A_grouped_cdna_annotated.bedgraph
44.74 MB
P0_WT_A_grouped_cdna_annotated.bed.gz
10.81 MB
iCount summary
5week_Stau2KD_5_grouped_cdna_summary_subtype.tsv
1.01 kB
5week_Stau2KD_5_grouped_cdna_summary_gene.tsv
1.48 MB
5week_Stau2KD_5_grouped_cdna_summary_type.tsv
445 B
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
75.83 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
54.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
54.51 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
44.66 MB
iCount group
5week_Stau2KD_5_grouped_cdna.bed.gz
11.76 MB
5week_Stau2KD_5_grouped_cdna.bedgraph
55.05 MB
5week_Stau2KD_5_grouped_reads.bed.gz
12.28 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
55.89 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
77.04 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
55.52 kB
iCount group
P0_WT_D_grouped_cdna.bed.gz
9.89 MB
P0_WT_D_grouped_cdna.bedgraph
45.75 MB
P0_WT_D_grouped_reads.bed.gz
10.25 MB
iCount group
5week_WT_6_grouped_reads.bed.gz
10.55 MB
5week_WT_6_grouped_cdna.bed.gz
10.12 MB
5week_WT_6_grouped_cdna.bedgraph
47.04 MB
PEKA
4mer analysis of P7_WT_G_grouped_cdna.tar.gz
556.28 kB
iCount summary
P0_WT_A_grouped_cdna_summary_subtype.tsv
1023 B
P0_WT_A_grouped_cdna_summary_gene.tsv
1.40 MB
P0_WT_A_grouped_cdna_summary_type.tsv
438 B
Paraclu
P0_WT_A_grouped_cdna_peaks.bed.gz
112.56 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
55.42 MB
iCount group
5week_Stau2KD_1_grouped_reads.bed.gz
11.61 MB
5week_Stau2KD_1_grouped_cdna.bed.gz
11.10 MB
5week_Stau2KD_1_grouped_cdna.bedgraph
52.13 MB
Paraclu
5week_Stau2KD_1_grouped_cdna_peaks.bed.gz
238.18 kB
iCount RNA-maps
5week_Stau2KD_1_grouped_cdna.tar.gz
2.39 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
752.77 MB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bed.gz
121.07 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
121.89 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
263.46 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
25.12 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.79 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
67.86 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.02 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
37.61 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
76.13 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
54.34 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
54.53 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single.tar.gz
751.84 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
91.99 MB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.tar.gz
491.66 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
331.61 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
48.21 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
48.44 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.71 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
16.99 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
34.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.25 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
34.61 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
8.16 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
30.75 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
30.63 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
48.24 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.tar.gz
448.29 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
27.33 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
40.97 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
27.26 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
438.93 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.fastq.gz
4.38 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
494.32 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
501.82 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.tar.gz
485.21 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
532.36 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
445.19 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
213.97 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
635.10 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
34.17 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
23.84 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
23.95 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
68.63 kB
PEKA
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PEKA
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PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.tar.gz
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PEKA
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PEKA
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PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
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PEKA
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PEKA
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iCount xlsites
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
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PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
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PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
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PEKA
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PEKA
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iCount xlsites
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PEKA
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STAR
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PEKA
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STAR
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STAR
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Paraclu
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STAR
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STAR
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STAR
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STAR
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STAR
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Paraclu
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PEKA
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iCount xlsites
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STAR
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Paraclu
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iCount xlsites
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STAR
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Cutadapt (single-end)
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Directory
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iCount xlsites
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iCount RNA-maps
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Paraclu
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STAR
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stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
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iCount xlsites
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iCount xlsites
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Paraclu
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STAR
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Paraclu
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PEKA
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iCount xlsites
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Directory
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Paraclu
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STAR
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iCount xlsites
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stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
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iCount RNA-maps
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STAR
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iCLIP reads proxy
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fastqc
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STAR
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stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
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stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
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iCount xlsites
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iCount xlsites
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stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
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PEKA
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Paraclu
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Paraclu
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Cutadapt (single-end)
fastqc
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Cutadapt (single-end)
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fastqc
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iCount xlsites
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stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.bedgraph
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iCount xlsites
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2.65 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.54 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.33 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
630.71 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
642.63 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.fastq.gz
394.21 MB
report.txt
687 B
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.24 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
176.08 kB
Cutadapt (single-end)
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.fastq.gz
26.17 MB
fastqc
Directory
report.txt
685 B
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_reads_single.bed.gz
12.09 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_skipped.bam
15.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bed.gz
11.83 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
41.38 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bedgraph
52.96 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.tar.gz
1005.37 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
526.16 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
537.04 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.43 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.11 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.fastq.gz
5.94 MB
report.txt
689 B
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
468 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.39 MB
Cutadapt (single-end)
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.fastq.gz
660.30 MB
fastqc
Directory
report.txt
682 B
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
714.59 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
304.93 MB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
160.48 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
207.34 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
101.06 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.63 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
55.67 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1000 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
523.74 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
491.20 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.14 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.fastq.gz
434.09 MB
report.txt
683 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.33 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
855.16 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.47 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
703.23 kB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.48 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
877.14 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.56 kB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.tar.gz
522.23 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.fastq.gz
28.19 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
764.74 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.tar.gz
264.81 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.17 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
693.14 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
560.73 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
388.09 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
917.80 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.99 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.26 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
17.17 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
37.87 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.16 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
723.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1017 B
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.fastq.gz
24.57 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
881.75 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
693 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.fastq.gz
6.29 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.59 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
690.53 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
56.29 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.21 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
220.12 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
17.03 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.fastq.gz
50.60 MB
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.35 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.49 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
774.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
287.09 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
879.44 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.tar.gz
792.28 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.18 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
747.82 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
641.73 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
930.37 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.94 kB
iCount summary
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.51 MB
Cutadapt (single-end)
report.txt
682 B
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.fastq.gz
426.39 MB
Paraclu
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single_peaks.bed.gz
159.15 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
895.89 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
458.57 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
214.72 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
798.38 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
459 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_skipped.bam
14.99 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
47.43 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_reads_single.bed.gz
14.53 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bed.gz
14.22 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bedgraph
64.33 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.fastq.gz
13.22 MB
report.txt
688 B
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.17 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
27.72 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.73 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.15 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
16.82 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.09 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
10.55 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
877.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
665.28 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.fastq.gz
105.27 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
1002.46 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.19 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
711.69 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
575.33 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1009 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.fastq.gz
25.96 MB
report.txt
688 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.tar.gz
152.53 kB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.47 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.tar.gz
519.80 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
437.18 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1001 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
449 B
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.fastq.gz
79.17 MB
report.txt
684 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.29 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1007 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
627.69 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
447 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
408.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
997 B
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
517.75 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.fastq.gz
38.80 MB
report.txt
688 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.06 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
683.45 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
691.04 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
7.18 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.tar.gz
299.83 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
779.70 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
270.66 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.56 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.13 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1007 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
454.82 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
451 B
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.fastq.gz
4.78 MB
report.txt
689 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.59 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
748.49 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.10 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.14 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
100.86 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
51.52 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
607.46 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
464 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
958.96 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
466.70 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.50 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.11 kB
Cutadapt (single-end)
report.txt
677 B
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.fastq.gz
333.13 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.fastq.gz
55.19 MB
report.txt
684 B
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam
804.21 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
370.54 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_SJ.out.tab
0 B
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
725.93 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
iCount RNA-maps
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single.tar.gz
1.27 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
778.43 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1020 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
453 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.23 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
631.00 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.tar.gz
1.51 MB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
187.15 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.tar.gz
465.70 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.tar.gz
521.18 kB
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.tar.gz
487.78 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.tar.gz
145.71 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.tar.gz
506.32 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.tar.gz
364.67 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome.tar.gz
535.45 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.tar.gz
381.48 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.tar.gz
397.21 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.tar.gz
362.03 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.tar.gz
505.98 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.fastq.gz
427.72 MB
report.txt
674 B
iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
478 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.63 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.90 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.tar.gz
1.15 MB
PEKA
4mer analysis of input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.tar.gz
531.55 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
297.72 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.tar.gz
363.42 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.tar.gz
366.74 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.tar.gz
67.81 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.tar.gz
173.91 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.tar.gz
415.10 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.tar.gz
143.04 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.tar.gz
137.30 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.tar.gz
76.48 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
363.94 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
95.98 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
18.44 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.53 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.01 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.tar.gz
309.67 kB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.fastq.gz
758.79 MB
fastqc
Directory
report.txt
674 B
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome.tar.gz
333.67 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
213.58 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.tar.gz
299.61 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
564.74 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.fastq.gz
749.48 MB
report.txt
674 B
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
16.89 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
30.67 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam
86.31 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
220.11 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.85 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bw
219.94 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam.bai
15.84 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed.bam
33.20 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
12.44 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.fastq.gz
12.27 MB
report.txt
694 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.40 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
128.28 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
69.59 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.fastq.gz
73.81 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bw
220.69 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam
30.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam.bai
18.09 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_stats.txt
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Cutadapt (single-end)
fastqc
Directory
report.txt
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stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.fastq.gz
48.28 MB
iCount RNA-maps
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1.45 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam.bai
19.07 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_SJ.out.tab
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stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bam
47.49 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed.bw
220.73 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.80 MB
Cutadapt (single-end)
fastqc
Directory
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382.85 MB
report.txt
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Cutadapt (single-end)
fastqc
Directory
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25.55 MB
report.txt
693 B
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
311.01 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
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stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.42 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
838.04 MB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
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203.42 MB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
347.27 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam.bai
19.56 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed.bam
948.41 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_trimmed_SJ.out.tab
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iCount summary
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stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.14 MB
iCount RNA-maps
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1.21 MB
Cutadapt (single-end)
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368.36 MB
fastqc
Directory
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Cutadapt (single-end)
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Directory
report.txt
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stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.fastq.gz
695.21 MB
Cutadapt (single-end)
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823.40 MB
fastqc
Directory
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Cutadapt (single-end)
fastqc
Directory
report.txt
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Cutadapt (single-end)
fastqc
Directory
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report.txt
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Cutadapt (single-end)
fastqc
Directory
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report.txt
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Cutadapt (single-end)
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Directory
report.txt
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stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.fastq.gz
1.29 GB
Cutadapt (single-end)
fastqc
Directory
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639.40 MB
report.txt
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Cutadapt (single-end)
fastqc
Directory
report.txt
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675.23 MB
Cutadapt (single-end)
fastqc
Directory
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606.13 MB
report.txt
679 B
STAR
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217.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
447.04 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
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STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam
522.00 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
254.58 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_SJ.out.tab
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Cutadapt (single-end)
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fastqc
Directory
Cutadapt (single-end)
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Directory
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70.10 MB
report.txt
685 B
STAR
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19.70 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_stats.txt
1.79 kB
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365.60 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bw
221.52 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam
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input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed_SJ.out.tab
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Cutadapt (single-end)
fastqc
Directory
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report.txt
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Cutadapt (single-end)
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Directory
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stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.fastq.gz
177.80 MB
Cutadapt (single-end)
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fastqc
Directory
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Cutadapt (single-end)
fastqc
Directory
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124.70 MB
report.txt
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Cutadapt (single-end)
fastqc
Directory
report.txt
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stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.fastq.gz
80.11 MB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam
885.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bw
221.60 kB
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638.79 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
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stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
495.06 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
246.45 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
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Cutadapt (single-end)
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Directory
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stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.fastq.gz
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Cutadapt (single-end)
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Directory
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stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.fastq.gz
127.85 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
502.87 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_trimmed.bam
1.42 GB
Cutadapt (single-end)
fastqc
Directory
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Cutadapt (single-end)
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fastqc
Directory
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479.21 MB
STAR
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input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bw
221.41 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam.bai
19.70 kB
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227.86 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam
316.29 MB
Cutadapt (single-end)
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158.38 MB
fastqc
Directory
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STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
17.10 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
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stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
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28.85 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
81.98 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam
275.84 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_SJ.out.tab
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stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
116.57 MB
Cutadapt (single-end)
fastqc
Directory
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441.55 MB
report.txt
680 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
539.26 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
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stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
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Cutadapt (single-end)
fastqc
Directory
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465.57 MB
report.txt
682 B
Cutadapt (single-end)
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680 B
fastqc
Directory
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472.25 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bw
219.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam.bai
14.92 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_SJ.out.tab
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stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_stats.txt
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stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam
5.84 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
2.98 MB
Cutadapt (single-end)
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fastqc
Directory
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340.39 MB
Cutadapt (single-end)
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680 B
fastqc
Directory
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233.11 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
146.69 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam
395.30 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam.bai
19.63 kB
Cutadapt (single-end)
fastqc
Directory
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451.19 MB
report.txt
680 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bw
220.53 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
14.84 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam
31.61 MB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
11.17 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
219.63 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
13.87 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
30.25 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
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125.51 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.20 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.04 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam.bai
19.14 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
62.82 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_trimmed.bam
177.66 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
299.54 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam
594.02 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
804.26 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
284.09 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bw
220.23 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam
64.83 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam.bai
16.68 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
23.94 MB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
195.42 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_trimmed.bam
544.36 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam
870.76 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
407.63 MB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
68.60 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed.bam
144.68 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam
15.03 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
7.42 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
220.23 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
17.31 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam.bai
16.54 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
4.09 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bw
220.13 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_trimmed.bam
7.57 MB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
195.02 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam
517.72 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
54.19 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam
149.26 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
43.64 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam
95.40 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed.bw
221.09 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
179.20 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam
510.68 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
83.67 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam
173.37 MB
STAR
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
434.45 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bw
221.62 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam
619.05 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-g-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
34.34 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
220.37 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam
92.21 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam.bai
18.37 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
658.56 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam
945.75 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam
209.97 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
102.48 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
717.04 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
305.75 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bw
220.59 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.04 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bam
31.11 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed.bam
487.58 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
250.29 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_trimmed_stats.txt
1.79 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam
779.81 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
289.69 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
314.94 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam
845.09 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_trimmed_stats.txt
1.78 kB
STAR
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bw
221.39 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam
427.87 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
315.88 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam
122.83 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.96 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed.bam.bai
18.30 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
220.27 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_trimmed.bam
468.09 MB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
220.27 MB
fastqc
Directory
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
390.16 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam
534.04 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bw
221.50 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam
1.00 GB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bw
221.60 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
766.95 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bw
219.94 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam
7.24 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed.bam.bai
17.38 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.66 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.22 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.34 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
18.58 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
38.08 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam
15.95 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
7.83 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam.bai
17.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bw
220.31 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
80.03 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
234.13 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
18.72 kB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
273.43 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed.bam
784.73 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam
942.53 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
638.73 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
104.84 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
54.06 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.27 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
STAR
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bw
221.49 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
599.12 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam
809.73 MB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam
30.56 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bam.bai
16.96 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed.bw
219.88 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
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11.36 MB
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iCLIP reads proxy
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Directory
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STAR
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STAR
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iCLIP reads proxy
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fastqc
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STAR
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iCLIP reads proxy
fastqc
Directory
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STAR
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iCount xlsites
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iCLIP reads proxy
fastqc
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STAR
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iCount xlsites
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iCLIP reads proxy
fastqc
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STAR
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iCount xlsites
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iCLIP reads proxy
fastqc
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STAR
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iCLIP reads proxy
fastqc
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iCount xlsites
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iCLIP reads proxy
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fastqc
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STAR
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iCount xlsites
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iCLIP reads proxy
fastqc
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STAR
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STAR
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iCount xlsites
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iCLIP reads proxy
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iCount xlsites
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iCLIP reads proxy
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iCLIP reads proxy
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fastqc
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STAR
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iCount xlsites
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STAR
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iCLIP reads proxy
fastqc
Directory
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iCount xlsites
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STAR
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iCLIP reads proxy
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STAR
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iCount xlsites
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iCLIP reads proxy
fastqc
Directory
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iCount xlsites
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STAR
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stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
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93.13 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
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iCLIP reads proxy
fastqc
Directory
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STAR
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stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
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iCount xlsites
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iCLIP reads proxy
fastqc
Directory
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STAR
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iCLIP reads proxy
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fastqc
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STAR
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input-cortex-p0-wt-1-5u-a-20200723-fl_trimmed.bam.bai
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iCount xlsites
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stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
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iCLIP reads proxy
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fastqc
Directory
STAR
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input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam
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iCount xlsites
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stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
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stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
106.53 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bw
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15.26 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_trimmed.bam.bai
18.30 kB
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iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.fastq.gz
214.72 MB
iCount xlsites
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stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
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STAR
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stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
30.93 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bw
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stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed_SJ.out.tab
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stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_trimmed.bam.bai
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iCLIP reads proxy
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fastqc
Directory
iCLIP reads proxy
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fastqc
Directory
iCount xlsites
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234 B
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stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
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STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
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stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
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stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.40 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
56.64 MB
STAR
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843.35 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed.bam.bai
19.70 kB
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620.54 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_SJ.out.tab
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221.66 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.fastq.gz
270.66 MB
fastqc
Directory
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.46 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed.bw
220.67 kB
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31.80 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
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19.42 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
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stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
54.06 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
79.21 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
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iCLIP reads proxy
fastqc
Directory
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51.52 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
19.49 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
237.68 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
82.26 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_SJ.out.tab
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input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam
972.33 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
674.03 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
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stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.08 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
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iCLIP reads proxy
fastqc
Directory
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370.54 MB
STAR
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input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam
500.33 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_stats.txt
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input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam.bai
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input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
368.74 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
455.37 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
222.61 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
1.79 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bw
220.22 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam
82.31 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed.bam.bai
18.16 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
28.99 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.06 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
63.20 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
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iCLIP reads proxy
fastqc
Directory
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41.01 MB
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam
841.40 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
584.23 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed.bw
221.71 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam.bai
18.16 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bam
10.73 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed.bw
220.20 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
5.25 MB
STAR
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam
914.80 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
656.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed.bw
221.65 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.82 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
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stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.38 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
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30.67 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
96.38 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
19.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.15 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.63 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
54.46 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam
149.85 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam.bai
19.35 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
38.97 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
44.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
38.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
12.44 MB
STAR
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
787.25 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_trimmed.bw
221.63 kB
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STAR
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iCount xlsites
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iCLIP reads proxy
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCLIP reads proxy
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iCLIP reads proxy
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iCount xlsites
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iCLIP reads proxy
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iCLIP reads proxy
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCLIP reads proxy
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iCount xlsites
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iCLIP reads proxy
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fastqc
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iCount xlsites
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iCount xlsites
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iCLIP reads proxy
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCLIP reads proxy
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iCLIP reads proxy
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Directory
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iCount xlsites
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iCLIP reads proxy
fastqc
Directory
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322.53 MB
iCount xlsites
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4.90 kB
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30.30 kB
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40.30 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.fastq.gz
376.85 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.59 kB
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46.38 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.95 kB
iCLIP reads proxy
fastqc
Directory
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7.42 MB
iCount xlsites
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141.55 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
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81.20 kB
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81.71 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
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stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
42.24 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
7.54 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
24.60 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
24.44 kB
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4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
33.18 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
667.59 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
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54.17 kB
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45.30 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
45.49 kB
iCount xlsites
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222 B
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92.44 kB
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91.77 kB
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4.90 kB
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161.51 kB
iCLIP reads proxy
fastqc
Directory
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4.09 MB
iCLIP reads proxy
fastqc
Directory
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21.40 MB
iCLIP reads proxy
fastqc
Directory
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54.19 MB
iCount xlsites
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45.10 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
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44.94 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.65 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
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56.01 kB
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47.41 kB
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4.90 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
47.22 kB
iCount xlsites
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56.65 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
40.47 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
40.67 kB
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4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.46 MB
iCount xlsites
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75.17 kB
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75.73 kB
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4.90 kB
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222 B
input-cortex-p7-wt-1-5u-g-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
124.28 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome.fastq.gz
620.54 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
77.06 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
134.39 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
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4.90 kB
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77.50 kB
iCLIP reads proxy
fastqc
Directory
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82.26 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
60.51 kB
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50.45 kB
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4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.10 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome.fastq.gz
434.45 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
674.03 MB
iCount xlsites
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72.16 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
72.40 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.32 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
iCLIP reads proxy
fastqc
Directory
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34.34 MB
iCount xlsites
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92.43 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
91.89 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
161.02 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
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53.46 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
65.66 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
53.72 kB
iCLIP reads proxy
fastqc
Directory
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368.74 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
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48.80 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
48.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
59.12 kB
iCLIP reads proxy
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.fastq.gz
222.61 MB
fastqc
Directory
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome.fastq.gz
28.99 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
658.56 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
27.47 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
27.40 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
36.05 kB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
138.29 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.18 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.71 kB
iCLIP reads proxy
fastqc
Directory
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5.25 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.35 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
54.41 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.07 kB
iCLIP reads proxy
fastqc
Directory
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15.04 MB
iCLIP reads proxy
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.fastq.gz
584.23 MB
fastqc
Directory
iCount xlsites
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86.15 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
151.75 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
87.01 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
113.35 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
71.06 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
72.29 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
39.17 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.95 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
38.93 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
262 B
iCLIP reads proxy
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome.fastq.gz
656.66 MB
fastqc
Directory
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
143.06 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.70 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.94 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
54.46 MB
iCount xlsites
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bed.gz
59.71 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
60.02 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
97.50 kB
input-cortex-5week-wt-1-5u-2-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome.fastq.gz
315.88 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.97 kB
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4.90 kB
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246 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
51.20 kB
iCount xlsites
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228 B
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input-cortex-5week-wt-1-5u-6-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
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81.50 kB
iCount xlsites
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stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
51.51 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
63.55 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
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stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
iCount xlsites
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238 B
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iCLIP reads proxy
fastqc
Directory
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439.00 MB
iCount xlsites
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input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
iCount xlsites
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222 B
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4.90 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
49.43 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
58.30 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.19 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.62 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_SJ.out.tab
1.24 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
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stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
302.30 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
47.98 MB
iCount xlsites
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30.25 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
23.15 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
23.11 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
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25.18 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
639.88 kB
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1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
185.53 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
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iCLIP reads proxy
fastqc
Directory
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3.66 MB
STAR
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1.48 MB
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3.69 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
385.61 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
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58.57 MB
iCLIP reads proxy
fastqc
Directory
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390.16 MB
iCount xlsites
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228 B
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STAR
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15.59 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
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3.80 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
98.58 MB
STAR
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25.28 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
149.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
899.64 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
3.76 MB
STAR
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4.14 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.56 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
578.59 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
75.23 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
42.49 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
31.02 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
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iCLIP reads proxy
fastqc
Directory
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766.95 MB
iCLIP reads proxy
fastqc
Directory
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7.83 MB
iCLIP reads proxy
fastqc
Directory
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80.03 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
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31.08 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
3.77 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
174.27 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
953.41 kB
STAR
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3.83 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
518.87 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
1.95 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.30 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.42 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
530.79 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
69.26 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
4.01 MB
iCount xlsites
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138.02 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
81.93 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.41 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
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51.97 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
52.15 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
62.40 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.68 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
36.79 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam
220.68 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_SJ.out.tab
1.20 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
638.73 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_SJ.out.tab
2.50 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam.bai
3.69 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam
782.70 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
126.10 MB
iCount xlsites
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4.90 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
116.56 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
70.71 kB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_premapped_to_ncRNAs_single.bed.gz
70.21 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
92.09 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam
507.58 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_SJ.out.tab
2.25 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.bam.bai
3.06 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_SJ.out.tab
2.39 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam.bai
3.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
114.98 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome.bam
766.44 MB
iCLIP reads proxy
fastqc
Directory
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599.12 MB
STAR
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42.59 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bw
1.38 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam.bai
2.70 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
259.66 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.07 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
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3.49 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_SJ.out.tab
1.47 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
58.53 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
383.08 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam.bai
4.01 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
127.66 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_SJ.out.tab
2.61 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.bam
848.75 MB
iCount xlsites
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4.90 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
130.83 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bed.gz
77.41 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
78.06 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam
479.20 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_SJ.out.tab
2.05 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.bam.bai
3.33 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
79.34 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
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stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_skipped.bam
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stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
90.36 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.51 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bw
752.56 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam.bai
2.31 MB
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4.97 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
150.62 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome.bam
32.01 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
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3.92 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bw
6.44 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
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19.95 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_SJ.out.tab
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stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam
115.10 MB
STAR
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801.40 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
104.39 MB
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1.98 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.bam.bai
4.17 MB
STAR
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2.09 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bw
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1.84 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.bam
7.95 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_stats.txt
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stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
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STAR
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stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
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stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
47.94 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.50 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
STAR
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
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3.75 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.bam
572.36 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
75.13 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_SJ.out.tab
1.55 MB
STAR
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stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bw
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33.11 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
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stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome.bam.bai
2.39 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam.bai
3.24 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bw
2.37 MB
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272.86 kB
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34.08 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
168.15 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
30.99 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
934.54 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
3.49 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
STAR
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam.bai
2.96 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome.bam
182.38 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_SJ.out.tab
634.48 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.12 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
2.02 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam
9.16 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bam.bai
2.45 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
64.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.bw
887.99 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_SJ.out.tab
2.41 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam.bai
4.29 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.bam
1023.22 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
133.59 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bw
1.41 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam.bai
2.86 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
155.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
3.19 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam
18.65 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam
1.48 GB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_SJ.out.tab
2.82 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
199.69 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome.bam.bai
4.69 MB
STAR
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bw
3.53 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam
93.89 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.50 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_SJ.out.tab
563.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome.bam.bai
3.35 MB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bw
2.25 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam.bai
3.31 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam
34.93 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
275.18 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.75 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam.bai
3.32 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam
550.01 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
96.93 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_SJ.out.tab
2.10 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam
513.10 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_SJ.out.tab
1.93 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.19 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome.bam.bai
3.56 MB
STAR
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam.bai
3.28 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome.bam
126.40 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
16.19 MB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
520.02 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.44 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
51.46 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam.bai
1.96 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam
6.36 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bw
535.52 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
STAR
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam
144.43 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.bam.bai
3.54 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_SJ.out.tab
889.35 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
25.18 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
69.18 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
3.69 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
526.80 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.42 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_SJ.out.tab
2.77 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam
833.07 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome.bam.bai
3.16 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
131.51 MB
STAR
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bw
2.84 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
380.06 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam
52.08 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.92 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.bam.bai
3.47 MB
FASTQ file (CLIP)
fastqc
Directory
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12.63 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_fastqc.zip
481.75 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
257.97 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam
42.10 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bw
1.29 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.06 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam.bai
2.58 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
14.49 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam.bai
3.39 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
523.60 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam
95.14 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
392.34 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
9.76 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bw
1.91 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam
65.56 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam.bai
3.06 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_fastqc.zip
503.02 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq.fastq.gz
29.36 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.bam.bai
3.48 MB
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STAR
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STAR
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STAR
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FASTQ file (CLIP)
fastqc
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fastqc
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STAR
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STAR
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stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_stats.txt
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STAR
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fastqc
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STAR
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STAR
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fastqc
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STAR
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FASTQ file (CLIP)
fastqc
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FASTQ file (CLIP)
fastqc
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STAR
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FASTQ file (CLIP)
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fastqc
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FASTQ file (CLIP)
fastqc
Directory
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STAR
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input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam
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input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam.bai
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STAR
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STAR
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STAR
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STAR
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input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam
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input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_stats.txt
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STAR
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STAR
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STAR
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STAR
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3.28 MB
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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1.14 GB
STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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iCount xlsites
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STAR
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iCount xlsites
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STAR
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iCount xlsites
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Paraclu
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iCount xlsites
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STAR
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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iCount RNA-maps
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STAR
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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STAR
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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iCount RNA-maps
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STAR
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iCount xlsites
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STAR
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iCount xlsites
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iCount RNA-maps
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STAR
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iCount xlsites
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STAR
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iCount xlsites
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iCount xlsites
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STAR
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iCount RNA-maps
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STAR
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iCount xlsites
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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STAR
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13.34 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.11 MB
iCount xlsites
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bedgraph
26.55 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
20.66 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single.bed.gz
6.15 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_skipped.bam
15.14 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.31 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bedgraph
27.11 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bed.gz
6.24 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
20.60 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_skipped.bam
15.61 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.36 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_skipped.bam
12.68 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.91 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.14 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bed.gz
2.80 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bedgraph
12.53 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
459 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
823.29 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
675.80 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
5.90 kB
iCount xlsites
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_skipped.bam
14.63 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bedgraph
20.23 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
15.19 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.83 MB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single.bed.gz
4.71 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
17.00 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1017.23 kB
STAR
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
478.78 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam.bai
2.30 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome.bam
890.44 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_SJ.out.tab
1.07 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bedgraph
12.11 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.19 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bed.gz
2.66 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.84 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.18 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
814.22 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_skipped.bam
12.53 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
1.69 MB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bed.gz
786.25 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.bedgraph
3.26 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bedgraph
7.53 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
3.23 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_reads_single.bed.gz
1.75 MB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_skipped.bam
12.39 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.bed.gz
1.66 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.48 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_skipped.bam
13.29 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.72 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bedgraph
11.79 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.22 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.bed.gz
2.62 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
23.95 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single.tar.gz
1.14 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bed.gz
2.60 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.12 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.bedgraph
11.86 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.73 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single.tar.gz
1.16 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.05 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
509.47 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
520.22 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.05 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.21 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bedgraph
17.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_skipped.bam
12.85 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.bed.gz
3.80 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.99 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single.tar.gz
1.39 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.88 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_skipped.bam
13.20 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bedgraph
17.90 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_reads_single.bed.gz
4.08 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.bed.gz
3.92 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single.tar.gz
1.44 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
582.39 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
594.63 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.38 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.14 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_skipped.bam
12.61 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.66 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.45 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bed.gz
2.36 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bedgraph
10.58 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
277.25 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
272.00 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.08 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
576.66 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.01 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bed.gz
9.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
9.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single.bedgraph
44.93 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_skipped.bam
13.58 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
18.39 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.40 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bedgraph
32.54 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.32 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.30 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bed.gz
7.01 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.91 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bedgraph
25.48 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.68 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.bed.gz
5.53 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_skipped.bam
13.46 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.79 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single.tar.gz
1.69 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bed.gz
2.24 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.48 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.36 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bedgraph
10.10 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.tar.gz
1.05 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.35 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.22 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.25 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.28 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.09 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
823.24 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
773.58 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
371.85 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
364.57 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.45 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
529.13 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bedgraph
34.60 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_skipped.bam
13.67 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.70 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single.bed.gz
7.36 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.25 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
137.68 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
568.00 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.25 MB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
579.65 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.32 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.86 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.13 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.09 MB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.11 MB
Paraclu
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.46 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single.tar.gz
763.45 kB
iCount xlsites
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iCount xlsites
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Paraclu
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iCount xlsites
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Paraclu
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iCount xlsites
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Paraclu
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iCount xlsites
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iCount xlsites
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iCount RNA-maps
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Paraclu
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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iCount xlsites
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iCount RNA-maps
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Paraclu
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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iCount xlsites
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iCount xlsites
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Paraclu
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iCount xlsites
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Paraclu
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iCount RNA-maps
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iCount xlsites
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iCount xlsites
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Paraclu
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iCount RNA-maps
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iCount xlsites
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iCount xlsites
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iCount RNA-maps
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iCount xlsites
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iCount xlsites
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15.08 MB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
60.79 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
934.43 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
10.13 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bedgraph
24.00 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single.bed.gz
5.21 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_skipped.bam
13.61 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_reads_single.bed.gz
5.40 MB
iCount xlsites
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bedgraph
25.28 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_skipped.bam
15.62 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.bed.gz
5.76 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
16.27 MB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_reads_single.bed.gz
5.88 MB
Paraclu
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_peaks.bed.gz
111.39 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.11 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
iCount xlsites
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bedgraph
19.97 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
12.99 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.70 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.bed.gz
4.59 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_skipped.bam
14.24 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single.tar.gz
1.06 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.76 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
16.96 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.11 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.15 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
500.97 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
460 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
783.34 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single.tar.gz
671.85 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl_mapped_to_genome_single_peaks.bed.gz
5.87 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single.tar.gz
920.99 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
464 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1003.46 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.08 MB
iCount xlsites
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bed.gz
6.13 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_reads_single.bed.gz
6.30 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
18.46 MB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_skipped.bam
14.95 kB
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.bedgraph
26.84 MB
iCount RNA-maps
input-cortex-p7-wt-1-5u-f-20200723-fl_mapped_to_genome_single.tar.gz
1.12 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-f-20200610-fl_mapped_to_genome.tar.gz
464.76 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.10 MB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_skipped.bam
14.98 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bed.gz
13.29 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_reads_single.bed.gz
13.60 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bedgraph
60.75 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
31.26 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome_single_peaks.bed.gz
34.60 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl_mapped_to_genome.tar.gz
493.82 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
718.51 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
453 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
214.14 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
594.10 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.18 MB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
54.70 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl_mapped_to_genome.tar.gz
534.14 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.17 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl_mapped_to_genome_single_peaks.bed.gz
31.50 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
737.43 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.24 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.06 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
463 B
iCount summary
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
546.04 kB
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1004 B
stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.tar.gz
1.09 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-6-20200610-fl-reseq_mapped_to_genome.tar.gz
152.16 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
171.32 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl_mapped_to_genome.tar.gz
632.95 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.31 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.49 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
471 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.25 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
50.04 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.70 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.07 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
943.36 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
462 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
366.23 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.34 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl_mapped_to_genome.tar.gz
605.89 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
618.23 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.24 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
896.78 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
13.92 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-4-20200610-fl-reseq_mapped_to_genome.tar.gz
395.13 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
714.08 kB
stau1-cortex-p7-wt-1-5u-before-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
852.73 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.77 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
719.61 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.16 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-g-20200610-fl_mapped_to_genome.tar.gz
501.46 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome.tar.gz
530.45 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.44 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl_mapped_to_genome_single.tar.gz
1.77 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
136.88 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.34 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-4-20200610-fl_mapped_to_genome_single.tar.gz
2.39 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.tar.gz
613.18 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.21 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome_single_peaks.bed.gz
52.55 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1019 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
678.17 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl-reseq_mapped_to_genome_single.tar.gz
583.50 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl_mapped_to_genome.tar.gz
509.98 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
392.79 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
998 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
452 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.03 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1017 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
814.20 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
466 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
48.31 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
403.88 kB
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
450 B
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
688.43 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.57 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1018 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
781.40 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
iCount RNA-maps
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.tar.gz
725.61 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
647.76 kB
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1015 B
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
456 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.16 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
642.07 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
565.08 kB
iCount summary
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
Paraclu
input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome_single_peaks.bed.gz
69.97 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-a-20200723-fl_mapped_to_genome.tar.gz
504.63 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
481.35 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
998 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.28 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome.tar.gz
136.67 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
847.51 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
488.92 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
370.12 kB
iCount summary
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.42 MB
input-cortex-p7-wt-1-5u-h-20200723-fl_mapped_to_genome_single_summary_type.tsv
473 B
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
844.95 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.72 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
819.95 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
710.47 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.94 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl-reseq_mapped_to_genome_single.tar.gz
695.14 kB
iCount summary
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.17 MB
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_type.tsv
465 B
input-cortex-5week-wt-1-5u-2-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
815.04 kB
stau1-cortex-p7-wt-1-5u-after-g-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B
iCount summary
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
994 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
448 B
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
422.71 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.30 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-4-20200610-fl-reseq_mapped_to_genome.tar.gz
144.28 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
659.72 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1014 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
459 B
iCount summary
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p7-wt-1-5u-g-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.36 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.28 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
903.24 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.60 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
559.70 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.tar.gz
370.67 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.30 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
463 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.tar.gz
470.18 kB
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.55 MB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.25 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl_mapped_to_genome_single_summary_type.tsv
471 B
iCount summary
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.43 MB
iCount summary
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
input-cortex-5week-stau2kd-1-5u-1-20200723-fl_mapped_to_genome_single_peaks.bed.gz
82.04 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-6-20200723-fl_mapped_to_genome_single.tar.gz
1.19 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
448.55 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
439.25 kB
Upload iCount sample annotation
20201109_lane69_imaps.tab.gz
1.32 kB
20201109_lane69_imaps.xlsx
223.65 kB
FASTQ file (single-end)
fastqc
Directory
LEE1302A2-A36_S32_L004_R1_001_fastqc.zip
542.87 kB
stderr.txt
1.23 kB
LEE1302A2-A36_S32_L004_R1_001.fastq.gz
16.37 GB

STAU1_cortex:5week_WT_1.5U_after_2_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.tar.gz
165.00 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq.fastq.gz
14.27 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_fastqc.zip
511.62 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1010 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
686.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.27 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.41 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
687 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.fastq.gz
14.51 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
9.46 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam
18.54 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bw
220.66 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
9.46 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
554.22 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
36.58 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
36.43 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
59.46 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.tar.gz
238.16 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam
23.91 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bw
2.14 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
3.40 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam.bai
3.60 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
169.23 kB
Cutadapt (single-end)
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.fastq.gz
12.78 MB
fastqc
Directory
report.txt
688 B
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
548.20 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.17 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.80 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
556.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.tar.gz
264.81 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
560.73 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
723.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1017 B
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.fastq.gz
13.22 MB
report.txt
688 B
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam
15.95 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
7.83 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam.bai
17.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bw
220.31 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
8.25 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bw
220.44 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam
16.59 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_trimmed.bam.bai
18.93 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
8.25 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
32.21 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
45.62 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
32.28 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
42.49 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
31.02 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
30.94 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
7.83 MB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bw
1.41 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam.bai
2.86 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
155.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
3.19 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam
18.65 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
471.84 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.11 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.90 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
480.28 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
559.24 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam.bai
2.44 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bam
17.03 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
3.17 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome.bw
1.10 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
149.04 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
426.17 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
882.28 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
434.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
1.74 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
659.72 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1014 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
459 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.28 kB

STAU1_cortex:5week_WT_1.5U_after_6_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.tar.gz
352.39 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1019 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
825.17 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.03 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
688.04 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.fastq.gz
29.86 MB
report.txt
687 B
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
18.91 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam
38.04 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bw
220.87 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.00 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
47.70 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
47.91 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.19 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
18.91 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.tar.gz
361.96 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam
52.39 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bw
4.54 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam.bai
4.43 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
6.77 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
303.51 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
688 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.fastq.gz
25.46 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.88 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
946.83 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
962.92 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.87 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
877.14 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.56 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
693.14 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.fastq.gz
25.96 MB
report.txt
688 B
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.tar.gz
381.48 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bw
220.53 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
14.84 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam
31.61 MB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam.bai
19.14 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bw
220.66 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.28 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_trimmed.bam
32.35 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
40.28 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.52 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
40.15 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.28 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.fastq.gz
14.84 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
252 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
38.34 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.18 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
38.53 kB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bw
2.25 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam.bai
3.31 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam
34.93 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
275.18 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.75 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_fastqc.zip
503.02 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq.fastq.gz
29.36 MB
STAR
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
269.16 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bw
1.85 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.71 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam.bai
2.88 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome.bam
32.88 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.88 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
819.44 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
835.68 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.44 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
795.13 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.55 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.30 MB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.bed.gz
779.00 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1017 B
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
814.20 kB
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-6-20200610-fl-reseq_mapped_to_genome_single.tar.gz
688.43 kB

input_cortex:P0_WT_1.5U_E_20200723_FL

Cutadapt (single-end)
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.fastq.gz
749.48 MB
report.txt
674 B
fastqc
Directory
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
658.56 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam
945.75 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam.bai
19.70 kB
FASTQ file (CLIP)
input-cortex-p0-wt-1-5u-e-20200723-fl_fastqc.zip
487.91 kB
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl.fastq.gz
825.99 MB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
141.18 kB
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.58 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
673 B
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.fastq.gz
815.37 MB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
733.15 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam
1.06 GB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_stats.txt
1.79 kB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
127.21 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.tar.gz
1.48 MB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
120.48 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
121.21 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
261.71 kB
iCLIP reads proxy
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
733.15 MB
fastqc
Directory
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
562.85 kB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam.bai
2.27 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam
1.32 GB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_SJ.out.tab
1.71 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
546.45 MB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.fastq.gz
732.32 MB
report.txt
674 B
fastqc
Directory
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_reads_single.bed.gz
12.09 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_skipped.bam
15.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bed.gz
11.83 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
41.38 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bedgraph
52.96 MB
iCount RNA-maps
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.tar.gz
1.51 MB
Paraclu
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_peaks.bed.gz
187.15 kB
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
472 B
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
564.74 kB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed.bam
972.33 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
674.03 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
674.03 MB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
92.43 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
91.89 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
161.02 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.fastq.gz
658.56 MB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
138.29 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.18 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.71 kB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_SJ.out.tab
1.58 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam.bai
2.18 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam
1.08 GB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
522.92 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
STAR
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam
1.02 GB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_SJ.out.tab
1.52 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.bam.bai
2.14 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
521.44 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bedgraph
51.54 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_reads_single.bed.gz
11.74 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_skipped.bam
15.04 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
32.15 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bed.gz
11.48 MB
iCount RNA-maps
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.tar.gz
1.50 MB
iCount xlsites
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bed.gz
10.97 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single.bedgraph
49.57 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
27.40 MB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_skipped.bam
15.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_reads_single.bed.gz
11.23 MB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome.tar.gz
559.70 kB
iCount summary
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_type.tsv
471 B
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-e-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.55 MB

STAU1_cortex:P0_WT_1.5U_after_D_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
331.15 kB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq.fastq.gz
78.20 MB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_fastqc.zip
465.92 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
863.54 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.71 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
710.76 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
347.90 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
684 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.fastq.gz
82.27 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam
97.81 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
220.80 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
37.61 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
37.61 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
76.13 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
54.34 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
54.53 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.tar.gz
331.61 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam
109.96 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
558.02 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bw
4.68 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
15.27 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam.bai
4.43 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
Cutadapt (single-end)
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.fastq.gz
78.57 MB
fastqc
Directory
report.txt
684 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1004.10 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.02 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.74 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
985.87 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.99 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
895.89 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.73 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
711.69 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.fastq.gz
79.17 MB
report.txt
684 B
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
34.34 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
220.37 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam
92.21 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam.bai
18.37 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
34.85 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bw
220.53 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam.bai
19.21 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed.bam
93.13 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
34.85 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.12 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.02 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
61.75 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
34.34 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
48.80 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
48.90 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
59.12 kB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
14.49 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam.bai
3.39 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
523.60 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam
95.14 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.74 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
926.05 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.75 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
907.45 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.09 MB
STAR
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam
92.54 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
513.67 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome.bam.bai
2.85 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
14.45 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.74 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
865.15 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
883.07 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.67 MB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.59 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
844.95 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
4.72 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
710.47 kB

STAU1_cortex:P7_WT_1.5U_after_H_20200610_FL_reseq

iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
951.81 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
9.39 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
797.56 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.fastq.gz
213.78 MB
report.txt
685 B
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
252.73 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
91.99 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
91.99 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
58.99 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
58.69 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
86.58 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.tar.gz
387.42 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
819.62 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam.bai
4.50 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
33.38 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam
279.93 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
686 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.fastq.gz
201.02 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
6.15 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
5.16 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.49 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.51 MB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
27.72 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
1002.46 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.tar.gz
415.10 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.fastq.gz
203.42 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
80.03 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
234.13 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
18.72 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam.bai
19.49 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed.bam
237.68 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
82.26 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
82.26 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
53.46 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
65.66 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
53.72 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.fastq.gz
80.03 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
51.97 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
52.15 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
62.40 kB
FASTQ file (CLIP)
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_fastqc.zip
471.90 kB
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq.fastq.gz
203.97 MB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
804.14 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
32.10 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam.bai
3.89 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam
243.87 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.26 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.07 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.28 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.31 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
792.02 kB
STAR
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam.bai
3.29 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
794.80 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
31.95 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.bam
236.67 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.14 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.81 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.12 MB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.39 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single.tar.gz
787.45 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
903.24 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.60 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-h-20200610-fl-reseq_mapped_to_genome.tar.gz
370.67 kB

input_cortex:P0_WT_1.5U_D_20200723_FL

iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
473 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.57 MB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.60 MB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
144.66 kB
FASTQ file (CLIP)
input-cortex-p0-wt-1-5u-d-20200723-fl.fastq.gz
864.08 MB
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_fastqc.zip
491.72 kB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
219.67 kB
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.tar.gz
572.79 kB
iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
477 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
Paraclu
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_peaks.bed.gz
163.11 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.62 MB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.fastq.gz
851.15 MB
fastqc
Directory
report.txt
673 B
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
752.77 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam
1.11 GB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_SJ.out.tab
0 B
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.tar.gz
568.55 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
752.77 MB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bed.gz
121.07 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
121.89 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
263.46 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
PEKA
4mer analysis of input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.tar.gz
584.23 kB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.fastq.gz
728.13 MB
fastqc
Directory
report.txt
674 B
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
523.25 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_SJ.out.tab
1.74 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam
1.46 GB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam.bai
2.35 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_skipped.bam
14.99 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
47.43 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_reads_single.bed.gz
14.53 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bed.gz
14.22 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bedgraph
64.33 MB
iCount summary
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.59 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_type.tsv
478 B
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
iCount RNA-maps
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.tar.gz
1.63 MB
Cutadapt (single-end)
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.fastq.gz
758.79 MB
fastqc
Directory
report.txt
674 B
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam
942.53 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
638.73 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_stats.txt
1.79 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
667.59 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-p0-wt-1-5u-d-20200723-fl_trimmed.bam
987.51 MB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
667.59 MB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
92.44 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bed.gz
91.77 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
161.51 kB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
138.02 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
81.93 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bedgraph
222 B
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_single.bed.gz
81.41 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.fastq.gz
638.73 MB
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_SJ.out.tab
1.61 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam
1.14 GB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
482.38 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam.bai
2.23 MB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
37.94 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_reads_single.bed.gz
14.22 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_skipped.bam
14.99 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bedgraph
63.04 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bed.gz
13.90 MB
STAR
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_SJ.out.tab
1.56 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam
1.03 GB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
479.22 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome.bam.bai
2.17 MB
iCount xlsites
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_skipped.bam
14.98 kB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bed.gz
13.29 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_reads_single.bed.gz
13.60 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_single.bedgraph
60.75 MB
input-cortex-p0-wt-1-5u-d-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
31.26 MB

STAU1_cortex:P7_WT_1.5U_after_F_20200610_FL_reseq

iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
868.81 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.14 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_fastqc.zip
464.23 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq.fastq.gz
122.44 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
374.61 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.fastq.gz
129.10 MB
report.txt
685 B
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam
152.05 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
55.42 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
55.89 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
77.04 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
55.52 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
55.42 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
374.39 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam
166.47 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
664.27 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
21.46 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam.bai
3.98 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.fastq.gz
127.49 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.03 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.41 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.07 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.05 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.63 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
879.44 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.18 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
747.82 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.fastq.gz
127.85 MB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
54.19 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam
149.26 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
54.46 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam
149.85 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_trimmed.bam.bai
19.35 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
54.19 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
60.51 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.45 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.10 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.fastq.gz
54.46 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
51.80 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
51.51 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
63.55 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam.bai
3.35 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
641.64 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam
161.46 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
21.11 MB
STAR
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam.bai
3.07 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
21.09 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
634.73 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.bam
160.02 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.31 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.00 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.62 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.30 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.02 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
748.28 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.07 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1020.06 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.21 MB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.bed.gz
999.96 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single.tar.gz
745.00 kB
Paraclu
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
8.13 kB
iCount summary
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
847.51 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-after-f-20200610-fl-reseq_mapped_to_genome.tar.gz
370.12 kB

STAU1_cortex:P0_WT_1-5U_before_E_20200610_FL

iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.82 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
456.24 kB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam
400.45 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
148.80 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.02 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
103.63 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.03 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.fastq.gz
148.80 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
396.57 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam.bai
4.09 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_SJ.out.tab
1.50 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
59.36 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_skipped.bam
12.52 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
7.13 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.18 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bed.gz
3.03 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bedgraph
13.61 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.13 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
353.92 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.fastq.gz
146.69 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.fastq.gz
336.86 MB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_fastqc.zip
445.40 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl.fastq.gz
323.05 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.fastq.gz
337.54 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
146.22 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam
394.15 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam.bai
19.21 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.85 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
Cutadapt (single-end)
report.txt
680 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.fastq.gz
340.39 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
146.69 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam
395.30 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_trimmed.bam.bai
19.63 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.fastq.gz
146.22 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
78.55 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
58.53 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
59.10 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.82 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
60.43 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
82.62 kB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_SJ.out.tab
1.48 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam.bai
3.69 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
385.61 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
58.57 MB
STAR
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam.bai
3.49 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_SJ.out.tab
1.47 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
58.53 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.bam
383.08 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_skipped.bam
12.51 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bed.gz
2.99 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.71 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.14 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bedgraph
13.46 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.35 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_skipped.bam
12.51 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bed.gz
2.96 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.bedgraph
13.34 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.11 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.11 MB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single_peaks.bed.gz
18.76 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-e-20200610-fl_mapped_to_genome.tar.gz
448.55 kB

input_cortex:5week_Stau2KD_1.5U_5_20200723_FL

iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_skipped.bam
13.96 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
18.38 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bedgraph
17.51 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bed.gz
4.20 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.28 MB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_fastqc.zip
481.19 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl.fastq.gz
650.74 MB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
987.15 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
470 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.36 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
974.68 kB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
89.95 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
682 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.fastq.gz
626.93 MB
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bw
221.85 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
601.64 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam
846.42 MB
iCLIP reads proxy
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.fastq.gz
601.64 MB
fastqc
Directory
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
103.44 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bed.gz
102.76 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
226.96 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.tar.gz
501.72 kB
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam.bai
3.02 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam
1.39 GB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
407.33 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_SJ.out.tab
951.38 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCLIP reads proxy
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.fastq.gz
444.25 MB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
report.txt
682 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.fastq.gz
409.60 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bedgraph
18.61 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
26.60 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.55 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_skipped.bam
13.95 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bed.gz
4.47 MB
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
468 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.39 MB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
160.48 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.tar.gz
506.32 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.fastq.gz
465.57 MB
report.txt
682 B
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
390.16 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam
534.04 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bw
221.50 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam.bai
19.70 kB
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bw
221.65 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed.bam
611.55 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
444.25 MB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
129.72 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.75 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bed.gz
74.45 kB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bed.gz
66.73 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
67.14 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.38 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_premapped_to_ncRNAs_single.bedgraph
238 B
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.fastq.gz
390.16 MB
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam.bai
2.84 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam
779.62 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_SJ.out.tab
845.90 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
344.59 MB
STAR
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_SJ.out.tab
768.04 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
339.59 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam
570.43 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.bam.bai
2.65 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bed.gz
3.53 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_reads_single.bed.gz
3.61 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
11.04 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_skipped.bam
13.95 kB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.bedgraph
15.08 MB
Paraclu
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_peaks.bed.gz
60.79 kB
iCount RNA-maps
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single.tar.gz
934.43 kB
iCount summary
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.30 MB
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_type.tsv
463 B
input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
PEKA
4mer analysis of input-cortex-5week-stau2kd-1-5u-5-20200723-fl_mapped_to_genome.tar.gz
470.18 kB

STAU1_cortex:P0_WT_1-5U_before_A_20200610_FL

FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_fastqc.zip
438.49 kB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl.fastq.gz
221.90 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
118.51 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam
281.18 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.64 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.56 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
111.05 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_SJ.out.tab
1.26 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.98 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
48.88 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
311.44 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.98 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bedgraph
12.79 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.50 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_skipped.bam
12.68 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bed.gz
2.86 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
17.06 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
348.39 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
438.93 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.fastq.gz
229.56 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.fastq.gz
230.18 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam.bai
19.21 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
116.22 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam
274.83 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.fastq.gz
118.51 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
466 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.14 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.tar.gz
1.21 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam
275.84 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
116.57 MB
Cutadapt (single-end)
report.txt
680 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_trimmed.fastq.gz
233.11 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.fastq.gz
116.22 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
58.41 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
77.62 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
57.85 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.fastq.gz
116.57 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.25 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
82.09 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
59.87 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.62 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_SJ.out.tab
1.24 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
302.30 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
47.98 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_SJ.out.tab
1.23 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam
300.44 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
47.94 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.bam.bai
3.50 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_skipped.bam
12.68 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.93 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.38 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bed.gz
2.82 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bedgraph
12.62 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_skipped.bam
12.68 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.91 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.14 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bed.gz
2.80 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single.bedgraph
12.53 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
17.00 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.12 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
16.96 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl_mapped_to_genome.tar.gz
439.25 kB

STAU1_cortex:5week_WT_1-5U_before_2_20200610_FL

iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
472 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.13 MB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.20 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam
187.94 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
92.24 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_SJ.out.tab
0 B
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.18 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.03 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
119.80 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
66.77 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
33.60 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
212.75 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
1007.69 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
4.07 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.22 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bedgraph
12.93 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bed.gz
2.88 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
3.07 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.15 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
470 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.79 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
385.02 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
501.82 kB
Cutadapt (single-end)
report.txt
684 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.fastq.gz
138.68 MB
fastqc
Directory
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl.fastq.gz
146.13 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_fastqc.zip
459.55 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
684 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.fastq.gz
140.34 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam
170.83 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
82.26 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.fastq.gz
92.24 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.19 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
683 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.fastq.gz
149.75 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
83.67 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_trimmed.bam
173.37 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.83 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
55.12 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
56.29 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.fastq.gz
82.26 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
86.69 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
58.83 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
242 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
57.60 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.fastq.gz
83.67 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
31.08 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
3.77 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
174.27 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
953.41 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam
168.15 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
30.99 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_SJ.out.tab
934.54 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.bam.bai
3.49 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bedgraph
12.44 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bed.gz
2.75 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.93 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.98 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_skipped.bam
13.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bedgraph
12.11 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.19 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.bed.gz
2.66 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.84 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single.tar.gz
1.18 MB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
469 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.11 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
35.15 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl_mapped_to_genome.tar.gz
500.97 kB

STAU1_cortex:P7_WT_1-5U_before_G_20200610_FL

STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam
517.70 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
182.20 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
445.27 kB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.06 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
20.02 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.fastq.gz
182.20 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
66.10 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
103.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
65.50 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
4.38 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.43 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
70.89 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
543.95 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bed.gz
2.45 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_skipped.bam
12.61 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.54 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bedgraph
10.92 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
6.74 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.08 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
464 B
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
20.10 kB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.tar.gz
1.08 MB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
346.81 kB
Paraclu
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_peaks.bed.gz
19.98 kB
PEKA
4mer analysis of stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.tar.gz
445.19 kB
Cutadapt (single-end)
fastqc
Directory
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680 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.fastq.gz
436.51 MB
FASTQ file (CLIP)
fastqc
Directory
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443.54 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl.fastq.gz
418.70 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
680 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.fastq.gz
437.49 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
178.49 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam.bai
19.21 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam
509.03 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.fastq.gz
441.55 MB
report.txt
680 B
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
179.20 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam.bai
19.63 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed.bam
510.68 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.fastq.gz
178.49 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
75.50 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bedgraph
236 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
58.84 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
58.42 kB
iCLIP reads proxy
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.fastq.gz
179.20 MB
fastqc
Directory
iCount xlsites
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236 B
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
60.22 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_single.bed.gz
59.89 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
79.59 kB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.42 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
530.79 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
69.26 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
4.01 MB
STAR
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
69.18 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam.bai
3.69 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome.bam
526.80 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_SJ.out.tab
1.42 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.24 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.49 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_skipped.bam
12.61 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bed.gz
2.40 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bedgraph
10.73 MB
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.tar.gz
1.08 MB
iCount xlsites
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_skipped.bam
12.61 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.66 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.45 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bed.gz
2.36 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.bedgraph
10.58 MB
iCount summary
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.06 MB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single_summary_type.tsv
463 B
iCount RNA-maps
stau1-cortex-p7-wt-1-5u-before-g-20200610-fl_mapped_to_genome_single.tar.gz
1.09 MB

STAU1_cortex:P0_WT_1.5U_before_A_20200610_FL_reseq

FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq.fastq.gz
30.62 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_fastqc.zip
461.34 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
720.62 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1012 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
592.25 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
593.94 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.fastq.gz
32.10 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
39.11 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.75 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.46 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
213.97 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
45.46 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
62.69 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
45.25 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
16.75 MB
Cutadapt (single-end)
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.fastq.gz
31.39 MB
fastqc
Directory
report.txt
685 B
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam.bai
3.17 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.28 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
265.96 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bw
1.75 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam
44.60 MB
Cutadapt (single-end)
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.fastq.gz
31.52 MB
report.txt
685 B
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
526.16 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
537.04 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.43 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.11 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.26 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
17.17 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
37.87 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.16 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
725.93 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
213.58 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bw
220.22 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.34 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam.bai
18.58 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_trimmed.bam
38.08 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
41.20 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
50.32 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
41.43 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
16.26 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
42.05 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
42.26 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
52.22 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
16.34 MB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam
42.59 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bw
1.38 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam.bai
2.70 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
259.66 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.07 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
257.97 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam
42.10 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bw
1.29 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
7.06 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.bam.bai
2.58 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.12 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.07 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
515.83 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
526.78 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.05 MB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
509.47 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
520.22 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.05 MB
Paraclu
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
718.51 kB
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
453 B
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1013 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome.tar.gz
214.14 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
594.10 kB

STAU1_cortex:5week_Stau2KD_1-5U_after_1_20200610_FL

FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_fastqc.zip
458.54 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl.fastq.gz
384.09 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
166.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
86.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
88.12 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.tar.gz
606.89 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam.bai
3.41 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam
577.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_SJ.out.tab
2.14 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
86.76 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bed.gz
7.93 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_skipped.bam
13.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
20.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bedgraph
36.95 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.30 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.01 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.37 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
158.39 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.tar.gz
457.15 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.35 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
477 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
138.27 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.tar.gz
611.34 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.fastq.gz
362.91 MB
report.txt
688 B
iCLIP reads proxy
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.fastq.gz
246.45 MB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.fastq.gz
394.21 MB
report.txt
687 B
Cutadapt (single-end)
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.fastq.gz
368.36 MB
fastqc
Directory
report.txt
688 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
217.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
447.04 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
495.06 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
246.45 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam
455.37 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
222.61 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_trimmed_stats.txt
1.79 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.fastq.gz
217.74 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
103.71 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.66 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.64 kB
iCLIP reads proxy
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.fastq.gz
222.61 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
113.35 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_single.bed.gz
71.06 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
72.29 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam.bai
3.32 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_SJ.out.tab
2.10 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam
477.73 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
79.07 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam
457.69 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_SJ.out.tab
2.08 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome.bam.bai
3.26 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
78.70 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bedgraph
36.24 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
16.03 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bed.gz
7.74 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_skipped.bam
13.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.11 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bed.gz
7.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.bedgraph
35.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.92 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_skipped.bam
13.68 kB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.23 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_type.tsv
478 B
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single_peaks.bed.gz
136.88 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-1-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB

STAU1_cortex:P0_WT_1.5U_before_D_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.tar.gz
284.72 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
744.03 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
454 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1016 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.23 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
628.22 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_fastqc.zip
464.90 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq.fastq.gz
46.75 MB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.fastq.gz
49.23 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
629.29 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
19.63 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
22.23 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
58.14 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
220.48 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.tar.gz
288.94 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
22.23 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
62.90 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
47.77 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
47.52 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
Cutadapt (single-end)
report.txt
685 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.fastq.gz
48.05 MB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
8.86 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
390.87 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bw
2.33 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam.bai
3.59 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam
62.00 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.96 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
657.96 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
670.27 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.65 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
56.29 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.21 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
220.12 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
17.03 kB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
778.43 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1020 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
453 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.23 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.tar.gz
631.00 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.tar.gz
299.61 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
685 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.fastq.gz
48.28 MB
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
21.21 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
44.05 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
51.66 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
44.17 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam.bai
18.51 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bw
220.22 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
21.40 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_trimmed.bam
56.64 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.fastq.gz
21.40 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
45.10 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
248 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
44.94 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
53.65 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
365.45 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bw
1.39 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam
57.00 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
8.67 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam.bai
2.55 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
STAR
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
370.88 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bw
1.58 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam
57.84 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome.bam.bai
2.78 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
8.68 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
616.36 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
603.75 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.28 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.45 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bed.gz
582.39 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
594.63 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.41 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.38 MB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.14 MB
iCount summary
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
457 B
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
737.43 kB
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1022 B
Paraclu
stau1-cortex-p0-wt-1-5u-before-d-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.24 kB

STAU1_cortex:P0_WT_1-5U_after_A_20200610_FL

STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
730.86 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
311.04 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.tar.gz
548.20 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
82.86 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
150.26 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
82.04 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.fastq.gz
311.04 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.65 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.92 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam.bai
3.79 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam
806.60 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
128.31 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_SJ.out.tab
2.54 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bed.gz
7.16 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
15.28 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.45 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bedgraph
33.12 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
474 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.33 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.02 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.89 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.92 MB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.tar.gz
547.93 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
679 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.fastq.gz
596.89 MB
FASTQ file (CLIP)
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_fastqc.zip
432.49 kB
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl.fastq.gz
576.26 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.fastq.gz
598.40 MB
report.txt
679 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.tar.gz
417.32 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
714.59 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
304.93 MB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.fastq.gz
606.13 MB
report.txt
679 B
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed.bam
717.04 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
305.75 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_trimmed_SJ.out.tab
0 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.fastq.gz
304.93 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.66 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
98.94 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.34 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.fastq.gz
305.75 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bedgraph
234 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
106.16 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_single.bed.gz
70.31 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
71.07 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_SJ.out.tab
2.50 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam.bai
3.69 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam
782.70 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
126.10 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
126.00 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam
778.34 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_SJ.out.tab
2.49 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome.bam.bai
3.63 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.35 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bedgraph
32.74 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.87 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bed.gz
7.06 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bedgraph
32.54 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
12.32 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.30 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.bed.gz
7.01 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single.tar.gz
1.91 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_type.tsv
473 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.31 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl_mapped_to_genome_single_peaks.bed.gz
68.49 kB

STAU1_cortex:5week_Stau2KD_1-5U_after_5_20200610_FL

PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.tar.gz
459.80 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam
183.81 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
24.52 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam.bai
4.22 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_SJ.out.tab
768.77 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bw
11.18 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.09 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
468 B
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
25.06 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.67 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bed.gz
2.55 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
9.84 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bedgraph
11.22 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.14 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
465 B
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.tar.gz
1.06 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.tar.gz
370.36 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.tar.gz
465.08 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.fastq.gz
81.47 MB
report.txt
687 B
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl.fastq.gz
100.19 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_fastqc.zip
488.08 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.fastq.gz
69.59 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
34.06 kB
Cutadapt (single-end)
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.fastq.gz
100.65 MB
fastqc
Directory
report.txt
687 B
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.fastq.gz
84.25 MB
report.txt
687 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.10 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.14 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
100.86 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
51.52 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.40 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
128.28 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
69.59 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.51 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
67.20 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
68.04 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam
104.84 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
54.06 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed.bw
221.27 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_trimmed_stats.txt
1.78 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
53.21 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
54.06 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
79.21 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.fastq.gz
51.52 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bed.gz
55.90 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
85.82 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
56.80 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_single.bedgraph
250 B
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.fastq.gz
54.06 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam.bai
3.92 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bw
6.44 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
19.95 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_SJ.out.tab
707.75 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam
115.10 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
19.78 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam.bai
3.51 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_SJ.out.tab
688.56 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome.bam
104.53 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bed.gz
2.37 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.48 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
5.60 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bedgraph
10.55 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.tar.gz
1.06 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_skipped.bam
12.63 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bed.gz
2.24 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
4.48 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_reads_single.bed.gz
2.36 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.bedgraph
10.10 MB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single.tar.gz
1.05 MB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_peaks.bed.gz
24.70 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.07 MB
stau1-cortex-5week-stau2kd-1-5u-after-5-20200610-fl_mapped_to_genome_single_summary_type.tsv
467 B

STAU1_cortex:P0_WT_1.5U_after_A_20200610_FL_reseq

Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.09 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
365.76 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
948.12 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
463 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
822.26 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
822.14 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.fastq.gz
81.40 MB
report.txt
684 B
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.84 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
98.66 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
42.04 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
42.04 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
55.46 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
55.71 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
83.68 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
41.15 MB
Cutadapt (single-end)
report.txt
684 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.fastq.gz
79.86 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
17.83 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
588.68 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam.bai
3.77 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam
110.76 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.26 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.41 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
3.10 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.28 MB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
464 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
958.96 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.11 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
363.94 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
95.98 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
18.44 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.53 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.01 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
684 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.fastq.gz
80.11 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.06 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
63.20 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.fastq.gz
41.01 MB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam
96.38 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bam.bai
19.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
41.15 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed.bw
220.63 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
50.97 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
66.47 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
51.20 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq.fastq.gz
77.45 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_fastqc.zip
457.52 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
17.45 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
573.55 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam.bai
3.22 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam
106.40 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
STAR
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
17.43 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
571.12 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam.bai
3.11 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.bam
105.64 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.45 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.26 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.23 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.32 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.42 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.35 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bed.gz
1.22 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
1.25 MB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.bedgraph
5.28 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
6.09 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single.tar.gz
823.24 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
943.36 kB
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
462 B
stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-a-20200610-fl-reseq_mapped_to_genome.tar.gz
366.23 kB

STAU1_cortex:5week_Stau2KD_1.5U_before_5_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.tar.gz
362.99 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
859.03 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
460 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1021 B
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
718.90 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
719.77 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.fastq.gz
26.06 MB
report.txt
693 B
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam
33.27 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
16.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bw
221.00 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
48.21 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
48.44 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
81.71 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
16.99 MB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.tar.gz
361.98 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.fastq.gz
24.32 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam.bai
4.01 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
292.20 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bw
3.49 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
6.50 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam
40.70 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
4.07 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
986.91 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
967.57 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.96 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.40 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.82 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.fastq.gz
24.57 MB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
877.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
PEKA
4mer analysis of stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.tar.gz
366.74 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bw
220.69 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam
30.32 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam.bai
18.09 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.54 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bw
220.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam.bai
19.42 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed.bam
30.73 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
15.72 MB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
40.38 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
40.24 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
57.68 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
iCLIP reads proxy
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.54 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
61.18 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
41.95 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
264 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
41.81 kB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.fastq.gz
15.72 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.99 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam.bai
3.24 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bw
2.37 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
272.86 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam
34.08 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_fastqc.zip
486.65 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq.fastq.gz
25.70 MB
STAR
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bw
2.18 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
5.97 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam.bai
3.03 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome.bam
33.07 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
270.01 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.95 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
951.95 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.40 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.98 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
932.95 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.80 kB
iCount xlsites
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.40 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
937.53 kB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bedgraph
3.90 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.82 MB
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.bed.gz
918.87 kB
iCount summary
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1023 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
461 B
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
852.73 kB
Paraclu
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
7.77 kB
iCount RNA-maps
stau1-cortex-5week-stau2kd-1-5u-before-5-20200610-fl-reseq_mapped_to_genome_single.tar.gz
719.61 kB

STAU1_cortex:5week_WT_1-5U_after_2_20200610_FL

iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.fastq.gz
299.54 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
177.14 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
91.95 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
89.92 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_SJ.out.tab
2.15 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam.bai
3.40 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam
660.00 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
102.15 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
475 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.39 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
146.24 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bedgraph
37.19 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bed.gz
8.07 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
20.20 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.56 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.04 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.41 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.tar.gz
2.00 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.tar.gz
1.96 MB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
136.75 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.tar.gz
613.99 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
683 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.fastq.gz
421.55 MB
FASTQ file (CLIP)
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl.fastq.gz
460.34 MB
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_fastqc.zip
468.29 kB
Paraclu
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_peaks.bed.gz
223.95 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.tar.gz
466.08 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.fastq.gz
434.09 MB
report.txt
683 B
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.fastq.gz
469.80 MB
report.txt
682 B
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam
522.00 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
254.58 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
299.54 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam
594.02 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_SJ.out.tab
0 B
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam.bai
19.70 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_unmapped.out.mate1.fastq.gz
266.32 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_trimmed.bam
539.89 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
69.71 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
68.55 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
107.15 kB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.fastq.gz
254.58 MB
fastqc
Directory
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.fastq.gz
266.32 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bed.gz
72.65 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_reads_single.bed.gz
74.36 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_single.bedgraph
240 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
118.50 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam.bai
3.32 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam
550.01 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
96.93 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_SJ.out.tab
2.10 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_stats.txt
1.82 kB
STAR
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_SJ.out.tab
2.07 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
96.21 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam
515.98 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_stats.txt
1.81 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.bam.bai
3.26 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
8.22 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bed.gz
7.72 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_skipped.bam
14.00 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bedgraph
35.84 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
16.05 MB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.tar.gz
1.98 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bed.gz
7.37 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_singleAndMulti.bed.gz
14.26 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_reads_single.bed.gz
7.86 MB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_skipped.bam
14.01 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single.bedgraph
34.58 MB
iCount summary
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_type.tsv
476 B
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome_single_summary_gene.tsv
1.34 MB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-after-2-20200610-fl_mapped_to_genome.tar.gz
613.18 kB

input_cortex:5week_WT_1.5U_4_20200723_FL

PEKA
4mer analysis of input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.tar.gz
449.32 kB
FASTQ file (CLIP)
fastqc
Directory
input-cortex-5week-wt-1-5u-4-20200723-fl_fastqc.zip
498.21 kB
input-cortex-5week-wt-1-5u-4-20200723-fl.fastq.gz
672.35 MB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
312.99 kB
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.32 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
170.62 kB
Cutadapt (single-end)
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.fastq.gz
650.29 MB
report.txt
676 B
fastqc
Directory
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam
860.26 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bw
221.82 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
633.96 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam.bai
19.70 kB
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.fastq.gz
633.96 MB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
227.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bed.gz
102.32 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
102.98 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.tar.gz
487.93 kB
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam
1.86 GB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_SJ.out.tab
629.02 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
268.72 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam.bai
3.69 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
677 B
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.fastq.gz
240.67 MB
iCount RNA-maps
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.tar.gz
777.84 kB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_skipped.bam
13.38 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_reads_single.bed.gz
4.16 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
26.43 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bed.gz
4.11 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bedgraph
16.60 MB
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
469 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.35 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.03 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.tar.gz
792.28 kB
PEKA
4mer analysis of input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.tar.gz
505.98 kB
Cutadapt (single-end)
fastqc
Directory
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.fastq.gz
382.85 MB
report.txt
677 B
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bw
221.41 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
227.86 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam
316.29 MB
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bw
221.64 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam
500.33 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_stats.txt
1.78 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_SJ.out.tab
0 B
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed.bam.bai
19.70 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_trimmed_unmapped.out.mate1.fastq.gz
368.74 MB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
104.61 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
63.35 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bed.gz
63.07 kB
iCLIP reads proxy
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.fastq.gz
227.86 MB
fastqc
Directory
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bed.gz
72.16 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_reads_single.bed.gz
72.40 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_skipped.bam
4.90 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_singleAndMulti.bed.gz
125.32 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_premapped_to_ncRNAs_single.bedgraph
228 B
iCLIP reads proxy
fastqc
Directory
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.fastq.gz
368.74 MB
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam
819.51 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
200.77 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_SJ.out.tab
514.32 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam.bai
3.23 MB
STAR
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam.bai
2.95 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_stats.txt
1.81 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_unmapped.out.mate1.fastq.gz
190.92 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bam
352.09 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome.bw
11.23 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_SJ.out.tab
468.24 kB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bed.gz
3.68 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_reads_single.bed.gz
3.73 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
16.06 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_skipped.bam
13.39 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bedgraph
14.80 MB
iCount xlsites
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bed.gz
2.73 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_skipped.bam
13.39 kB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_reads_single.bed.gz
2.77 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.bedgraph
11.34 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_singleAndMulti.bed.gz
9.29 MB
iCount summary
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_type.tsv
466 B
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_gene.tsv
1.23 MB
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
Paraclu
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single_peaks.bed.gz
48.31 kB
iCount RNA-maps
input-cortex-5week-wt-1-5u-4-20200723-fl_mapped_to_genome_single.tar.gz
725.61 kB

STAU1_cortex:5week_WT_1.5U_before_2_20200610_FL_reseq

PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.tar.gz
67.19 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
406.91 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1005 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
452 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.05 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
464.73 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq.fastq.gz
5.03 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_fastqc.zip
508.46 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.fastq.gz
5.14 MB
report.txt
688 B
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam.bai
18.93 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam
6.49 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.37 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bw
220.18 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
34.17 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
23.84 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
23.95 kB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
3.37 MB
fastqc
Directory
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.tar.gz
65.75 kB
Cutadapt (single-end)
report.txt
689 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.fastq.gz
4.72 MB
fastqc
Directory
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.54 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam.bai
2.64 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam
8.14 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
60.53 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bw
945.45 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
170.87 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
651.73 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
702.99 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
167.93 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
447 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
408.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
997 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.06 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.fastq.gz
4.78 MB
report.txt
689 B
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
466.70 kB
PEKA
4mer analysis of stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.tar.gz
67.81 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bw
219.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam.bai
14.92 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam
5.84 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
2.98 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam
5.94 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bw
219.91 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
3.04 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed.bam.bai
16.26 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
iCLIP reads proxy
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
2.98 MB
fastqc
Directory
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
27.00 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
20.80 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
20.87 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
21.54 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
21.45 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
27.93 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
254 B
iCLIP reads proxy
fastqc
Directory
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.fastq.gz
3.04 MB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.44 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
51.46 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam.bai
1.96 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam
6.36 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bw
535.52 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
STAR
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam
6.08 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bw
477.73 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
1.43 MB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
50.49 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_stats.txt
1.79 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome.bam.bai
1.84 MB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
608.16 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
370.36 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
155.60 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
158.45 kB
iCount xlsites
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
318.68 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bed.gz
150.35 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.bedgraph
589.55 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
153.17 kB
iCount RNA-maps
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single.tar.gz
470.12 kB
iCount summary
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
392.79 kB
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
998 B
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
452 B
Paraclu
stau1-cortex-5week-wt-1-5u-before-2-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
1.03 kB

STAU1_cortex:P0_WT_1.5U_after_E_20200610_FL_reseq

iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
458 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
794.49 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.53 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
292.09 kB
FASTQ file (CLIP)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq.fastq.gz
53.50 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_fastqc.zip
461.03 kB
Cutadapt (single-end)
report.txt
684 B
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.fastq.gz
56.29 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
25.12 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bw
220.68 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam.bai
19.70 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam
67.12 MB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.52 kB
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
290.75 kB
iCLIP reads proxy
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
25.12 MB
fastqc
Directory
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
49.79 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
67.86 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
50.02 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bw
2.88 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
10.07 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam.bai
3.90 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
405.18 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam
70.87 MB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
641.84 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.fastq.gz
54.87 MB
report.txt
684 B
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.95 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
739.13 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
2.42 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
724.35 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.25 kB
Paraclu
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_peaks.bed.gz
3.53 kB
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
641.73 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
798.38 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
459 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1.00 kB
Cutadapt (single-end)
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.fastq.gz
55.19 MB
report.txt
684 B
PEKA
4mer analysis of stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.tar.gz
297.72 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bw
220.23 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam
64.83 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam.bai
16.68 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
23.94 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_unmapped.out.mate1.fastq.gz
24.21 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_stats.txt
1.78 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed_SJ.out.tab
0 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam.bai
18.65 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bw
220.40 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_trimmed.bam
65.35 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
23.94 MB
iCLIP reads proxy
fastqc
Directory
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.fastq.gz
24.21 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
46.59 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
46.38 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
56.95 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_skipped.bam
4.90 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_singleAndMulti.bed.gz
54.17 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bed.gz
45.30 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_single.bedgraph
246 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_premapped_to_ncRNAs_reads_single.bed.gz
45.49 kB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
392.34 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
9.76 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bw
1.91 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam
65.56 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam.bai
3.06 MB
STAR
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_SJ.out.tab
387.32 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam
64.12 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bam.bai
2.67 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_unmapped.out.mate1.fastq.gz
9.75 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_stats.txt
1.80 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome.bw
1.64 MB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
701.98 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.86 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.58 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
716.81 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
iCount xlsites
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bedgraph
2.78 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_reads_single.bed.gz
692.42 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_skipped.bam
12.24 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_singleAndMulti.bed.gz
1.33 MB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.bed.gz
678.09 kB
iCount summary
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_subtype.tsv
1018 B
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_gene.tsv
781.40 kB
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single_summary_type.tsv
455 B
iCount RNA-maps
stau1-cortex-p0-wt-1-5u-after-e-20200610-fl-reseq_mapped_to_genome_single.tar.gz
642.07 kB