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Folder iconFUS iCLIP Mouse brain

Rahul Arora
June 22, 2020

FUS_Lorea_Blaz_20160528_JU1.fastq.gz

FASTQ file (single-end)
fastqc
Directory
FUS_Lorea_Blaz_20160528_JU1.fastq.gz
12.53 GB
stderr.txt
1.19 kB
FUS_Lorea_Blaz_20160528_JU1_fastqc.zip
492.64 kB

FUS_Lorea_Blaz_20151220_JU1.fastq.gz

FASTQ file (single-end)
FUS_Lorea_Blaz_20151220_JU1.fastq.gz
8.01 GB
fastqc
Directory
FUS_Lorea_Blaz_20151220_JU1_fastqc.zip
481.21 kB
stderr.txt
1.25 kB

FUS_brain_Het_20160528_JU1

FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20160528-ju1.fastq.gz
254.87 MB
fus-brain-het-20160528-ju1_fastqc.zip
443.84 kB
Cutadapt (single-end)
fastqc
Directory
fus-brain-het-20160528-ju1_trimmed.fastq.gz
257.68 MB
report.txt
662 B
STAR
fus-brain-het-20160528-ju1_trimmed_unmapped.out.mate1.fastq.gz
43.83 MB
fus-brain-het-20160528-ju1_trimmed.bam
330.92 MB
fus-brain-het-20160528-ju1_trimmed_stats.txt
1.81 kB
fus-brain-het-20160528-ju1_trimmed.bw
24.94 kB
fus-brain-het-20160528-ju1_trimmed_SJ.out.tab
510.97 kB
fus-brain-het-20160528-ju1_trimmed.bam.bai
3.24 MB
iCount xlsites
fus-brain-het-20160528-ju1_mapped_to_genome_singleAndMulti.bed.gz
7.76 MB
fus-brain-het-20160528-ju1_mapped_to_genome_skipped.bam
3.02 kB
fus-brain-het-20160528-ju1_mapped_to_genome_single.bedgraph
28.57 MB
fus-brain-het-20160528-ju1_mapped_to_genome_reads_single.bed.gz
7.12 MB
fus-brain-het-20160528-ju1_mapped_to_genome_single.bed.gz
6.26 MB
iCount RNA-maps
fus-brain-het-20160528-ju1_mapped_to_genome_single.tar.gz
1.19 MB
Paraclu
fus-brain-het-20160528-ju1_mapped_to_genome_single_peaks.bed.gz
11.40 kB
iCount summary
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_gene.tsv
1.45 MB
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_subtype.tsv
1013 B
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_type.tsv
436 B
PEKA
4mer analysis of fus-brain-het-20160528-ju1_mapped_to_genome.tar.gz
386.43 kB

FUS_brain_Het_20160528_JU1_1

STAR
fus-brain-het-20160528-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
26.42 MB
fus-brain-het-20160528-ju1-1_trimmed_SJ.out.tab
192.53 kB
fus-brain-het-20160528-ju1-1_trimmed.bw
18.25 kB
fus-brain-het-20160528-ju1-1_trimmed.bam.bai
3.05 MB
fus-brain-het-20160528-ju1-1_trimmed.bam
185.19 MB
fus-brain-het-20160528-ju1-1_trimmed_stats.txt
1.81 kB
iCount xlsites
fus-brain-het-20160528-ju1-1_mapped_to_genome_skipped.bam
2.00 kB
fus-brain-het-20160528-ju1-1_mapped_to_genome_reads_single.bed.gz
3.69 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.bed.gz
3.20 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.bedgraph
14.28 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
4.00 MB
iCount summary
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1007 B
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_type.tsv
433 B
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.25 MB
Paraclu
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_peaks.bed.gz
3.47 kB
iCount RNA-maps
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.tar.gz
863.65 kB
PEKA
4mer analysis of fus-brain-het-20160528-ju1-1_mapped_to_genome.tar.gz
339.56 kB
Cutadapt (single-end)
fastqc
Directory
fus-brain-het-20160528-ju1-1_trimmed.fastq.gz
146.23 MB
report.txt
664 B
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20160528-ju1-1.fastq.gz
144.39 MB
fus-brain-het-20160528-ju1-1_fastqc.zip
453.94 kB

FUS_brain_Wt_20160528_JU1_1

FASTQ file (CLIP)
fus-brain-wt-20160528-ju1-1.fastq.gz
90.62 MB
fus-brain-wt-20160528-ju1-1_fastqc.zip
481.17 kB
fastqc
Directory
iCount RNA-maps
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.tar.gz
712.24 kB
PEKA
4mer analysis of fus-brain-wt-20160528-ju1-1_mapped_to_genome.tar.gz
323.44 kB
STAR
fus-brain-wt-20160528-ju1-1_trimmed.bam.bai
2.97 MB
fus-brain-wt-20160528-ju1-1_trimmed_SJ.out.tab
140.01 kB
fus-brain-wt-20160528-ju1-1_trimmed_stats.txt
1.81 kB
fus-brain-wt-20160528-ju1-1_trimmed.bam
125.28 MB
fus-brain-wt-20160528-ju1-1_trimmed.bw
13.30 kB
fus-brain-wt-20160528-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
21.57 MB
iCount xlsites
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.bedgraph
8.95 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_skipped.bam
1.70 kB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.bed.gz
2.04 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
2.69 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_reads_single.bed.gz
2.33 MB
iCount summary
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.15 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_type.tsv
428 B
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1004 B
Paraclu
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_peaks.bed.gz
2.89 kB
Cutadapt (single-end)
report.txt
662 B
fastqc
Directory
fus-brain-wt-20160528-ju1-1_trimmed.fastq.gz
90.86 MB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
9.11 GB
fastqc
Directory
demux_nomatch_fastqc.zip
500.94 kB

FUS_brain_Het_20151220_JU1_3

FASTQ file (CLIP)
fus-brain-het-20151220-ju1-3_fastqc.zip
490.41 kB
fastqc
Directory
fus-brain-het-20151220-ju1-3.fastq.gz
47.09 MB
iCount RNA-maps
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.tar.gz
676.54 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-het-20151220-ju1-3_trimmed.fastq.gz
47.39 MB
STAR
fus-brain-het-20151220-ju1-3_trimmed.bam
89.96 MB
fus-brain-het-20151220-ju1-3_trimmed.bam.bai
4.13 MB
fus-brain-het-20151220-ju1-3_trimmed_unmapped.out.mate1.fastq.gz
14.49 MB
fus-brain-het-20151220-ju1-3_trimmed_SJ.out.tab
148.60 kB
fus-brain-het-20151220-ju1-3_trimmed.bw
21.76 kB
fus-brain-het-20151220-ju1-3_trimmed_stats.txt
1.80 kB
iCount xlsites
fus-brain-het-20151220-ju1-3_mapped_to_genome_singleAndMulti.bed.gz
7.04 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_skipped.bam
1.91 kB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.bed.gz
3.42 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_reads_single.bed.gz
3.59 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.bedgraph
15.22 MB
iCount summary
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_gene.tsv
1.28 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_subtype.tsv
1009 B
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_type.tsv
432 B
PEKA
4mer analysis of fus-brain-het-20151220-ju1-3_mapped_to_genome.tar.gz
260.97 kB
Paraclu
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_peaks.bed.gz
4.89 kB

FUS_brain_Het_20151220_JU1_4

iCount RNA-maps
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.tar.gz
914.06 kB
Cutadapt (single-end)
fus-brain-het-20151220-ju1-4_trimmed.fastq.gz
105.15 MB
report.txt
664 B
fastqc
Directory
STAR
fus-brain-het-20151220-ju1-4_trimmed_SJ.out.tab
321.95 kB
fus-brain-het-20151220-ju1-4_trimmed.bam.bai
3.73 MB
fus-brain-het-20151220-ju1-4_trimmed.bw
32.86 kB
fus-brain-het-20151220-ju1-4_trimmed.bam
194.16 MB
fus-brain-het-20151220-ju1-4_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-4_trimmed_unmapped.out.mate1.fastq.gz
28.45 MB
iCount xlsites
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.bed.gz
7.87 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.bedgraph
36.01 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_reads_single.bed.gz
8.28 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_skipped.bam
2.91 kB
fus-brain-het-20151220-ju1-4_mapped_to_genome_singleAndMulti.bed.gz
15.53 MB
iCount summary
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_subtype.tsv
1017 B
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_type.tsv
434 B
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_gene.tsv
1.54 MB
Paraclu
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_peaks.bed.gz
19.17 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-4_mapped_to_genome.tar.gz
372.60 kB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20151220-ju1-4.fastq.gz
104.09 MB
fus-brain-het-20151220-ju1-4_fastqc.zip
470.32 kB

FUS_brain_Wt_20151220_JU1_6

FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20151220-ju1-6_fastqc.zip
542.29 kB
fus-brain-wt-20151220-ju1-6.fastq.gz
10.92 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-wt-20151220-ju1-6_trimmed.fastq.gz
4.91 MB
STAR
fus-brain-wt-20151220-ju1-6_trimmed_unmapped.out.mate1.fastq.gz
2.57 MB
fus-brain-wt-20151220-ju1-6_trimmed.bam.bai
2.07 MB
fus-brain-wt-20151220-ju1-6_trimmed.bw
5.54 kB
fus-brain-wt-20151220-ju1-6_trimmed.bam
8.44 MB
fus-brain-wt-20151220-ju1-6_trimmed_SJ.out.tab
16.63 kB
fus-brain-wt-20151220-ju1-6_trimmed_stats.txt
1.80 kB
iCount xlsites
fus-brain-wt-20151220-ju1-6_mapped_to_genome_singleAndMulti.bed.gz
391.07 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_reads_single.bed.gz
132.85 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.bedgraph
450.00 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.bed.gz
121.34 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_skipped.bam
1.47 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.tar.gz
384.68 kB
Paraclu
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_peaks.bed.gz
831 B
iCount summary
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_gene.tsv
380.51 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_type.tsv
417 B
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_subtype.tsv
908 B
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-6_mapped_to_genome.tar.gz
122.91 kB

FUS_brain_Het_20151220_JU1_9

iCount RNA-maps
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.tar.gz
481.71 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-het-20151220-ju1-9_trimmed.fastq.gz
22.72 MB
STAR
fus-brain-het-20151220-ju1-9_trimmed_unmapped.out.mate1.fastq.gz
8.27 MB
fus-brain-het-20151220-ju1-9_trimmed.bw
10.38 kB
fus-brain-het-20151220-ju1-9_trimmed.bam
41.57 MB
fus-brain-het-20151220-ju1-9_trimmed_SJ.out.tab
60.94 kB
fus-brain-het-20151220-ju1-9_trimmed.bam.bai
3.77 MB
fus-brain-het-20151220-ju1-9_trimmed_stats.txt
1.80 kB
iCount xlsites
fus-brain-het-20151220-ju1-9_mapped_to_genome_reads_single.bed.gz
905.80 kB
fus-brain-het-20151220-ju1-9_mapped_to_genome_singleAndMulti.bed.gz
2.32 MB
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.bed.gz
818.82 kB
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.bedgraph
3.32 MB
fus-brain-het-20151220-ju1-9_mapped_to_genome_skipped.bam
1.47 kB
iCount summary
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_type.tsv
424 B
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_subtype.tsv
993 B
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_gene.tsv
894.67 kB
Paraclu
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_peaks.bed.gz
1.60 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-9_mapped_to_genome.tar.gz
219.30 kB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-9.fastq.gz
23.03 MB
fastqc
Directory
fus-brain-het-20151220-ju1-9_fastqc.zip
505.98 kB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
fastqc
Directory
demux_nomatch_fastqc.zip
488.70 kB
demux_nomatch.fastq.gz
5.00 GB

FUS_brain_Het_20151220_JU1_10

FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20151220-ju1-10_fastqc.zip
455.80 kB
fus-brain-het-20151220-ju1-10.fastq.gz
11.74 MB
STAR
fus-brain-het-20151220-ju1-10_trimmed_unmapped.out.mate1.fastq.gz
2.99 MB
fus-brain-het-20151220-ju1-10_trimmed_SJ.out.tab
31.32 kB
fus-brain-het-20151220-ju1-10_trimmed_stats.txt
1.79 kB
fus-brain-het-20151220-ju1-10_trimmed.bam
17.57 MB
fus-brain-het-20151220-ju1-10_trimmed.bam.bai
2.78 MB
fus-brain-het-20151220-ju1-10_trimmed.bw
8.21 kB
iCount xlsites
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.bedgraph
1.57 MB
fus-brain-het-20151220-ju1-10_mapped_to_genome_reads_single.bed.gz
448.38 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_singleAndMulti.bed.gz
982.95 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_skipped.bam
1.76 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.bed.gz
399.62 kB
iCount summary
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_subtype.tsv
982 B
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_type.tsv
421 B
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_gene.tsv
646.33 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.tar.gz
431.71 kB
Paraclu
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_peaks.bed.gz
974 B
PEKA
4mer analysis of fus-brain-het-20151220-ju1-10_mapped_to_genome.tar.gz
214.16 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
665 B
fus-brain-het-20151220-ju1-10_trimmed.fastq.gz
11.30 MB

FUS_brain_Het_20151220_JU1_7

FASTQ file (CLIP)
fus-brain-het-20151220-ju1-7_fastqc.zip
522.24 kB
fastqc
Directory
fus-brain-het-20151220-ju1-7.fastq.gz
48.95 MB
STAR
fus-brain-het-20151220-ju1-7_trimmed.bam
86.94 MB
fus-brain-het-20151220-ju1-7_trimmed_unmapped.out.mate1.fastq.gz
17.54 MB
fus-brain-het-20151220-ju1-7_trimmed.bw
14.63 kB
fus-brain-het-20151220-ju1-7_trimmed.bam.bai
4.19 MB
fus-brain-het-20151220-ju1-7_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-7_trimmed_SJ.out.tab
138.81 kB
iCount xlsites
fus-brain-het-20151220-ju1-7_mapped_to_genome_reads_single.bed.gz
1.64 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_singleAndMulti.bed.gz
4.40 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_skipped.bam
2.00 kB
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.bed.gz
1.48 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.bedgraph
6.29 MB
Paraclu
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_peaks.bed.gz
2.81 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.tar.gz
563.59 kB
iCount summary
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_subtype.tsv
1003 B
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_type.tsv
432 B
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_gene.tsv
1.11 MB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-7_mapped_to_genome.tar.gz
306.17 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
fus-brain-het-20151220-ju1-7_trimmed.fastq.gz
46.42 MB

FUS_brain_Wt_20151220_JU1_1

FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20151220-ju1-1_fastqc.zip
461.70 kB
fus-brain-wt-20151220-ju1-1.fastq.gz
180.03 MB
iCount RNA-maps
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.tar.gz
1.17 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-wt-20151220-ju1-1_trimmed.fastq.gz
179.56 MB
STAR
fus-brain-wt-20151220-ju1-1_trimmed.bam
330.08 MB
fus-brain-wt-20151220-ju1-1_trimmed.bam.bai
3.17 MB
fus-brain-wt-20151220-ju1-1_trimmed_SJ.out.tab
613.52 kB
fus-brain-wt-20151220-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
43.51 MB
fus-brain-wt-20151220-ju1-1_trimmed_stats.txt
1.81 kB
iCount xlsites
fus-brain-wt-20151220-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
29.26 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_skipped.bam
3.75 kB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.bed.gz
14.68 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.bedgraph
68.23 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_reads_single.bed.gz
15.40 MB
iCount summary
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.80 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_type.tsv
441 B
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1023 B
Paraclu
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_peaks.bed.gz
59.14 kB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-1_mapped_to_genome.tar.gz
413.66 kB

FUS_brain_Wt_20151220_JU1_2

FASTQ file (CLIP)
fus-brain-wt-20151220-ju1-2.fastq.gz
195.28 MB
fastqc
Directory
fus-brain-wt-20151220-ju1-2_fastqc.zip
464.28 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.tar.gz
1.30 MB
Cutadapt (single-end)
fus-brain-wt-20151220-ju1-2_trimmed.fastq.gz
196.94 MB
fastqc
Directory
report.txt
663 B
Paraclu
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_peaks.bed.gz
62.57 kB
iCount summary
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_type.tsv
443 B
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_gene.tsv
1.79 MB
STAR
fus-brain-wt-20151220-ju1-2_trimmed.bam.bai
3.23 MB
fus-brain-wt-20151220-ju1-2_trimmed_stats.txt
1.81 kB
fus-brain-wt-20151220-ju1-2_trimmed.bam
352.01 MB
fus-brain-wt-20151220-ju1-2_trimmed_SJ.out.tab
604.91 kB
fus-brain-wt-20151220-ju1-2_trimmed_unmapped.out.mate1.fastq.gz
47.93 MB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-2_mapped_to_genome.tar.gz
420.21 kB
iCount xlsites
fus-brain-wt-20151220-ju1-2_mapped_to_genome_skipped.bam
4.01 kB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.bedgraph
73.67 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_reads_single.bed.gz
16.58 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.bed.gz
15.81 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_singleAndMulti.bed.gz
29.32 MB

FUS_brain_Wt_20151220_JU1

FASTQ file (CLIP)
fus-brain-wt-20151220-ju1_fastqc.zip
486.61 kB
fastqc
Directory
fus-brain-wt-20151220-ju1.fastq.gz
116.09 MB
STAR
fus-brain-wt-20151220-ju1_trimmed.bam.bai
3.58 MB
fus-brain-wt-20151220-ju1_trimmed_unmapped.out.mate1.fastq.gz
34.48 MB
fus-brain-wt-20151220-ju1_trimmed_stats.txt
1.81 kB
fus-brain-wt-20151220-ju1_trimmed.bam
221.25 MB
fus-brain-wt-20151220-ju1_trimmed_SJ.out.tab
438.85 kB
iCount xlsites
fus-brain-wt-20151220-ju1_mapped_to_genome_singleAndMulti.bed.gz
19.52 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_reads_single.bed.gz
8.93 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single.bed.gz
8.53 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single.bedgraph
38.98 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_skipped.bam
2.67 kB
iCount summary
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_gene.tsv
1.64 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_subtype.tsv
1018 B
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_type.tsv
439 B
Paraclu
fus-brain-wt-20151220-ju1_mapped_to_genome_single_peaks.bed.gz
25.11 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1_mapped_to_genome_single.tar.gz
917.58 kB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1_mapped_to_genome.tar.gz
372.22 kB
Cutadapt (single-end)
fastqc
Directory
fus-brain-wt-20151220-ju1_trimmed.fastq.gz
113.08 MB
report.txt
661 B

No Sample

FASTQ file (CLIP)
fus-brain-wt-20151220-ju1-6.fastq.gz
10.92 MB
fastqc
Directory
fus-brain-wt-20151220-ju1-6_fastqc.zip
542.29 kB
Upload iCount sample annotation
FUS_Lorea_Blaz_20151220_JU1.tab.gz
1.01 kB
FUS_Lorea_Blaz_20151220_JU1.xlsx
15.47 kB
Upload iCount sample annotation
FUS_Lorea_Blaz_20160528_JU1.xlsx
14.57 kB
FUS_Lorea_Blaz_20160528_JU1.tab.gz
918 B
FASTQ file (single-end)
FUS_Lorea_Blaz_20151220_JU1.fastq.gz
8.01 GB
fastqc
Directory
FUS_Lorea_Blaz_20151220_JU1_fastqc.zip
481.21 kB
stderr.txt
1.25 kB
FASTQ file (single-end)
fastqc
Directory
FUS_Lorea_Blaz_20160528_JU1.fastq.gz
12.53 GB
stderr.txt
1.19 kB
FUS_Lorea_Blaz_20160528_JU1_fastqc.zip
492.64 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
415 B
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
733 B
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20160528-ju1.fastq.gz
254.87 MB
fus-brain-het-20160528-ju1_fastqc.zip
443.84 kB
FASTQ file (CLIP)
fus-brain-wt-20160528-ju1-1.fastq.gz
90.62 MB
fus-brain-wt-20160528-ju1-1_fastqc.zip
481.17 kB
fastqc
Directory
iCount RNA-maps
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.tar.gz
712.24 kB
PEKA
4mer analysis of fus-brain-wt-20160528-ju1-1_mapped_to_genome.tar.gz
323.44 kB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20160528-ju1.fastq.gz
6.70 MB
fus-brain-wt-20160528-ju1_fastqc.zip
473.69 kB
FASTQ file (CLIP)
fus-brain-wt-20151220-ju1_fastqc.zip
486.61 kB
fastqc
Directory
fus-brain-wt-20151220-ju1.fastq.gz
116.09 MB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20151220-ju1-1_fastqc.zip
461.70 kB
fus-brain-wt-20151220-ju1-1.fastq.gz
180.03 MB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-3_fastqc.zip
490.41 kB
fastqc
Directory
fus-brain-het-20151220-ju1-3.fastq.gz
47.09 MB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20151220-ju1-10_fastqc.zip
455.80 kB
fus-brain-het-20151220-ju1-10.fastq.gz
11.74 MB
iCount RNA-maps
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.tar.gz
481.71 kB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-8_fastqc.zip
533.44 kB
fastqc
Directory
fus-brain-het-20151220-ju1-8.fastq.gz
39.61 MB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-8_mapped_to_genome.tar.gz
290.57 kB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-7_fastqc.zip
522.24 kB
fastqc
Directory
fus-brain-het-20151220-ju1-7.fastq.gz
48.95 MB
iCount RNA-maps
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.tar.gz
931.52 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.tar.gz
914.06 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.tar.gz
676.54 kB
FASTQ file (CLIP)
fus-brain-wt-20151220-ju1-2.fastq.gz
195.28 MB
fastqc
Directory
fus-brain-wt-20151220-ju1-2_fastqc.zip
464.28 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.tar.gz
1.30 MB
iCount RNA-maps
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.tar.gz
1.17 MB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
9.11 GB
fastqc
Directory
demux_nomatch_fastqc.zip
500.94 kB
FASTQ file (CLIP)
fastqc
Directory
demux_nomatch_fastqc.zip
488.70 kB
demux_nomatch.fastq.gz
5.00 GB
Cutadapt (single-end)
fastqc
Directory
fus-brain-het-20160528-ju1_trimmed.fastq.gz
257.68 MB
report.txt
662 B
Cutadapt (single-end)
report.txt
661 B
fastqc
Directory
fus-brain-wt-20160528-ju1_trimmed.fastq.gz
5.07 MB
STAR
fus-brain-het-20160528-ju1_trimmed_unmapped.out.mate1.fastq.gz
43.83 MB
fus-brain-het-20160528-ju1_trimmed.bam
330.92 MB
fus-brain-het-20160528-ju1_trimmed_stats.txt
1.81 kB
fus-brain-het-20160528-ju1_trimmed.bw
24.94 kB
fus-brain-het-20160528-ju1_trimmed_SJ.out.tab
510.97 kB
fus-brain-het-20160528-ju1_trimmed.bam.bai
3.24 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-het-20151220-ju1-9_trimmed.fastq.gz
22.72 MB
Cutadapt (single-end)
report.txt
664 B
fastqc
Directory
fus-brain-het-20151220-ju1-8_trimmed.fastq.gz
36.48 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-wt-20151220-ju1-6_trimmed.fastq.gz
4.91 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
fus-brain-het-20151220-ju1-5_trimmed.fastq.gz
103.80 MB
Cutadapt (single-end)
fus-brain-het-20151220-ju1-4_trimmed.fastq.gz
105.15 MB
report.txt
664 B
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-het-20151220-ju1-3_trimmed.fastq.gz
47.39 MB
STAR
fus-brain-wt-20160528-ju1-1_trimmed.bam.bai
2.97 MB
fus-brain-wt-20160528-ju1-1_trimmed_SJ.out.tab
140.01 kB
fus-brain-wt-20160528-ju1-1_trimmed_stats.txt
1.81 kB
fus-brain-wt-20160528-ju1-1_trimmed.bam
125.28 MB
fus-brain-wt-20160528-ju1-1_trimmed.bw
13.30 kB
fus-brain-wt-20160528-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
21.57 MB
Cutadapt (single-end)
fus-brain-wt-20151220-ju1-2_trimmed.fastq.gz
196.94 MB
fastqc
Directory
report.txt
663 B
Cutadapt (single-end)
fastqc
Directory
report.txt
663 B
fus-brain-wt-20151220-ju1-1_trimmed.fastq.gz
179.56 MB
STAR
fus-brain-het-20160528-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
26.42 MB
fus-brain-het-20160528-ju1-1_trimmed_SJ.out.tab
192.53 kB
fus-brain-het-20160528-ju1-1_trimmed.bw
18.25 kB
fus-brain-het-20160528-ju1-1_trimmed.bam.bai
3.05 MB
fus-brain-het-20160528-ju1-1_trimmed.bam
185.19 MB
fus-brain-het-20160528-ju1-1_trimmed_stats.txt
1.81 kB
STAR
fus-brain-het-20151220-ju1-10_trimmed_unmapped.out.mate1.fastq.gz
2.99 MB
fus-brain-het-20151220-ju1-10_trimmed_SJ.out.tab
31.32 kB
fus-brain-het-20151220-ju1-10_trimmed_stats.txt
1.79 kB
fus-brain-het-20151220-ju1-10_trimmed.bam
17.57 MB
fus-brain-het-20151220-ju1-10_trimmed.bam.bai
2.78 MB
fus-brain-het-20151220-ju1-10_trimmed.bw
8.21 kB
STAR
fus-brain-wt-20160528-ju1-2_trimmed_SJ.out.tab
616.43 kB
fus-brain-wt-20160528-ju1-2_trimmed.bam.bai
3.57 MB
fus-brain-wt-20160528-ju1-2_trimmed.bam
481.09 MB
fus-brain-wt-20160528-ju1-2_trimmed_stats.txt
1.81 kB
fus-brain-wt-20160528-ju1-2_trimmed_unmapped.out.mate1.fastq.gz
57.44 MB
STAR
fus-brain-het-20151220-ju1-9_trimmed_unmapped.out.mate1.fastq.gz
8.27 MB
fus-brain-het-20151220-ju1-9_trimmed.bw
10.38 kB
fus-brain-het-20151220-ju1-9_trimmed.bam
41.57 MB
fus-brain-het-20151220-ju1-9_trimmed_SJ.out.tab
60.94 kB
fus-brain-het-20151220-ju1-9_trimmed.bam.bai
3.77 MB
fus-brain-het-20151220-ju1-9_trimmed_stats.txt
1.80 kB
STAR
fus-brain-wt-20151220-ju1_trimmed.bam.bai
3.58 MB
fus-brain-wt-20151220-ju1_trimmed_unmapped.out.mate1.fastq.gz
34.48 MB
fus-brain-wt-20151220-ju1_trimmed_stats.txt
1.81 kB
fus-brain-wt-20151220-ju1_trimmed.bam
221.25 MB
fus-brain-wt-20151220-ju1_trimmed_SJ.out.tab
438.85 kB
STAR
fus-brain-het-20151220-ju1-8_trimmed.bam
70.23 MB
fus-brain-het-20151220-ju1-8_trimmed.bw
11.78 kB
fus-brain-het-20151220-ju1-8_trimmed.bam.bai
4.08 MB
fus-brain-het-20151220-ju1-8_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-8_trimmed_SJ.out.tab
101.88 kB
fus-brain-het-20151220-ju1-8_trimmed_unmapped.out.mate1.fastq.gz
15.11 MB
iCount xlsites
fus-brain-wt-20160528-ju1_mapped_to_genome_singleAndMulti.bed.gz
251.99 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single.bedgraph
491.88 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_skipped.bam
1.76 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_reads_single.bed.gz
144.64 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single.bed.gz
129.86 kB
STAR
fus-brain-wt-20151220-ju1-6_trimmed_unmapped.out.mate1.fastq.gz
2.57 MB
fus-brain-wt-20151220-ju1-6_trimmed.bam.bai
2.07 MB
fus-brain-wt-20151220-ju1-6_trimmed.bw
5.54 kB
fus-brain-wt-20151220-ju1-6_trimmed.bam
8.44 MB
fus-brain-wt-20151220-ju1-6_trimmed_SJ.out.tab
16.63 kB
fus-brain-wt-20151220-ju1-6_trimmed_stats.txt
1.80 kB
STAR
fus-brain-wt-20151220-ju1-1_trimmed.bam
330.08 MB
fus-brain-wt-20151220-ju1-1_trimmed.bam.bai
3.17 MB
fus-brain-wt-20151220-ju1-1_trimmed_SJ.out.tab
613.52 kB
fus-brain-wt-20151220-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
43.51 MB
fus-brain-wt-20151220-ju1-1_trimmed_stats.txt
1.81 kB
iCount xlsites
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.bedgraph
8.95 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_skipped.bam
1.70 kB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single.bed.gz
2.04 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
2.69 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_reads_single.bed.gz
2.33 MB
STAR
fus-brain-het-20151220-ju1-7_trimmed.bam
86.94 MB
fus-brain-het-20151220-ju1-7_trimmed_unmapped.out.mate1.fastq.gz
17.54 MB
fus-brain-het-20151220-ju1-7_trimmed.bw
14.63 kB
fus-brain-het-20151220-ju1-7_trimmed.bam.bai
4.19 MB
fus-brain-het-20151220-ju1-7_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-7_trimmed_SJ.out.tab
138.81 kB
iCount xlsites
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.bedgraph
1.57 MB
fus-brain-het-20151220-ju1-10_mapped_to_genome_reads_single.bed.gz
448.38 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_singleAndMulti.bed.gz
982.95 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_skipped.bam
1.76 kB
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.bed.gz
399.62 kB
iCount xlsites
fus-brain-het-20160528-ju1-1_mapped_to_genome_skipped.bam
2.00 kB
fus-brain-het-20160528-ju1-1_mapped_to_genome_reads_single.bed.gz
3.69 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.bed.gz
3.20 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.bedgraph
14.28 MB
fus-brain-het-20160528-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
4.00 MB
iCount xlsites
fus-brain-het-20151220-ju1-9_mapped_to_genome_reads_single.bed.gz
905.80 kB
fus-brain-het-20151220-ju1-9_mapped_to_genome_singleAndMulti.bed.gz
2.32 MB
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.bed.gz
818.82 kB
fus-brain-het-20151220-ju1-9_mapped_to_genome_single.bedgraph
3.32 MB
fus-brain-het-20151220-ju1-9_mapped_to_genome_skipped.bam
1.47 kB
iCount xlsites
fus-brain-het-20160528-ju1_mapped_to_genome_singleAndMulti.bed.gz
7.76 MB
fus-brain-het-20160528-ju1_mapped_to_genome_skipped.bam
3.02 kB
fus-brain-het-20160528-ju1_mapped_to_genome_single.bedgraph
28.57 MB
fus-brain-het-20160528-ju1_mapped_to_genome_reads_single.bed.gz
7.12 MB
fus-brain-het-20160528-ju1_mapped_to_genome_single.bed.gz
6.26 MB
STAR
fus-brain-het-20151220-ju1-5_trimmed_SJ.out.tab
371.75 kB
fus-brain-het-20151220-ju1-5_trimmed_stats.txt
1.81 kB
fus-brain-het-20151220-ju1-5_trimmed.bam.bai
3.72 MB
fus-brain-het-20151220-ju1-5_trimmed_unmapped.out.mate1.fastq.gz
29.67 MB
fus-brain-het-20151220-ju1-5_trimmed.bam
197.97 MB
STAR
fus-brain-het-20151220-ju1-4_trimmed_SJ.out.tab
321.95 kB
fus-brain-het-20151220-ju1-4_trimmed.bam.bai
3.73 MB
fus-brain-het-20151220-ju1-4_trimmed.bw
32.86 kB
fus-brain-het-20151220-ju1-4_trimmed.bam
194.16 MB
fus-brain-het-20151220-ju1-4_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-4_trimmed_unmapped.out.mate1.fastq.gz
28.45 MB
STAR
fus-brain-het-20151220-ju1-3_trimmed.bam
89.96 MB
fus-brain-het-20151220-ju1-3_trimmed.bam.bai
4.13 MB
fus-brain-het-20151220-ju1-3_trimmed_unmapped.out.mate1.fastq.gz
14.49 MB
fus-brain-het-20151220-ju1-3_trimmed_SJ.out.tab
148.60 kB
fus-brain-het-20151220-ju1-3_trimmed.bw
21.76 kB
fus-brain-het-20151220-ju1-3_trimmed_stats.txt
1.80 kB
iCount xlsites
fus-brain-wt-20151220-ju1-6_mapped_to_genome_singleAndMulti.bed.gz
391.07 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_reads_single.bed.gz
132.85 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.bedgraph
450.00 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.bed.gz
121.34 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_skipped.bam
1.47 kB
iCount xlsites
fus-brain-het-20151220-ju1-8_mapped_to_genome_singleAndMulti.bed.gz
3.38 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_skipped.bam
1.67 kB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.bedgraph
4.59 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_reads_single.bed.gz
1.21 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.bed.gz
1.09 MB
iCount RNA-maps
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.tar.gz
528.91 kB
iCount xlsites
fus-brain-het-20151220-ju1-7_mapped_to_genome_reads_single.bed.gz
1.64 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_singleAndMulti.bed.gz
4.40 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_skipped.bam
2.00 kB
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.bed.gz
1.48 MB
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.bedgraph
6.29 MB
iCount xlsites
fus-brain-het-20151220-ju1-5_mapped_to_genome_reads_single.bed.gz
8.08 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_singleAndMulti.bed.gz
16.59 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.bedgraph
35.09 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_skipped.bam
2.48 kB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.bed.gz
7.69 MB
iCount xlsites
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.bed.gz
9.93 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.bedgraph
45.74 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_singleAndMulti.bed.gz
12.63 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_reads_single.bed.gz
11.29 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_skipped.bam
2.38 kB
iCount RNA-maps
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.tar.gz
1.37 MB
iCount xlsites
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.bed.gz
7.87 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_single.bedgraph
36.01 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_reads_single.bed.gz
8.28 MB
fus-brain-het-20151220-ju1-4_mapped_to_genome_skipped.bam
2.91 kB
fus-brain-het-20151220-ju1-4_mapped_to_genome_singleAndMulti.bed.gz
15.53 MB
iCount xlsites
fus-brain-het-20151220-ju1-3_mapped_to_genome_singleAndMulti.bed.gz
7.04 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_skipped.bam
1.91 kB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.bed.gz
3.42 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_reads_single.bed.gz
3.59 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single.bedgraph
15.22 MB
iCount RNA-maps
fus-brain-wt-20160528-ju1_mapped_to_genome_single.tar.gz
417.93 kB
iCount summary
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_type.tsv
418 B
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_gene.tsv
407.30 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_subtype.tsv
905 B
Paraclu
fus-brain-wt-20160528-ju1_mapped_to_genome_single_peaks.bed.gz
457 B
iCount xlsites
fus-brain-wt-20151220-ju1_mapped_to_genome_singleAndMulti.bed.gz
19.52 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_reads_single.bed.gz
8.93 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single.bed.gz
8.53 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single.bedgraph
38.98 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_skipped.bam
2.67 kB
iCount summary
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.15 MB
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_type.tsv
428 B
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1004 B
Paraclu
fus-brain-wt-20160528-ju1-1_mapped_to_genome_single_peaks.bed.gz
2.89 kB
iCount summary
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_subtype.tsv
982 B
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_type.tsv
421 B
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_summary_gene.tsv
646.33 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-10_mapped_to_genome_single.tar.gz
431.71 kB
Paraclu
fus-brain-het-20151220-ju1-10_mapped_to_genome_single_peaks.bed.gz
974 B
iCount summary
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1007 B
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_type.tsv
433 B
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.25 MB
Paraclu
fus-brain-het-20160528-ju1-1_mapped_to_genome_single_peaks.bed.gz
3.47 kB
iCount summary
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_type.tsv
424 B
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_subtype.tsv
993 B
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_summary_gene.tsv
894.67 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single.tar.gz
384.68 kB
iCount RNA-maps
fus-brain-het-20160528-ju1-1_mapped_to_genome_single.tar.gz
863.65 kB
Paraclu
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_peaks.bed.gz
2.36 kB
Paraclu
fus-brain-het-20151220-ju1-9_mapped_to_genome_single_peaks.bed.gz
1.60 kB
iCount xlsites
fus-brain-wt-20151220-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
29.26 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_skipped.bam
3.75 kB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.bed.gz
14.68 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single.bedgraph
68.23 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_reads_single.bed.gz
15.40 MB
Paraclu
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_peaks.bed.gz
2.81 kB
iCount RNA-maps
fus-brain-het-20160528-ju1_mapped_to_genome_single.tar.gz
1.19 MB
Paraclu
fus-brain-het-20160528-ju1_mapped_to_genome_single_peaks.bed.gz
11.40 kB
iCount summary
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_gene.tsv
1.57 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_subtype.tsv
1016 B
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_type.tsv
436 B
Paraclu
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_peaks.bed.gz
17.14 kB
iCount summary
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_gene.tsv
1.45 MB
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_subtype.tsv
1013 B
fus-brain-het-20160528-ju1_mapped_to_genome_single_summary_type.tsv
436 B
Paraclu
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_peaks.bed.gz
831 B
iCount summary
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_type.tsv
437 B
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_subtype.tsv
1020 B
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_gene.tsv
1.57 MB
Paraclu
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_peaks.bed.gz
15.92 kB
iCount summary
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_gene.tsv
1006.30 kB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_subtype.tsv
995 B
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_type.tsv
427 B
iCount summary
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_subtype.tsv
1017 B
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_type.tsv
434 B
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_summary_gene.tsv
1.54 MB
Paraclu
fus-brain-het-20151220-ju1-4_mapped_to_genome_single_peaks.bed.gz
19.17 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-4_mapped_to_genome.tar.gz
372.60 kB
iCount summary
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_gene.tsv
1.28 MB
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_subtype.tsv
1009 B
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_summary_type.tsv
432 B
PEKA
4mer analysis of fus-brain-wt-20160528-ju1_mapped_to_genome.tar.gz
118.70 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-10_mapped_to_genome.tar.gz
214.16 kB
iCount summary
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_gene.tsv
1.64 MB
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_subtype.tsv
1018 B
fus-brain-wt-20151220-ju1_mapped_to_genome_single_summary_type.tsv
439 B
Paraclu
fus-brain-wt-20151220-ju1_mapped_to_genome_single_peaks.bed.gz
25.11 kB
iCount RNA-maps
fus-brain-wt-20151220-ju1_mapped_to_genome_single.tar.gz
917.58 kB
Paraclu
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_peaks.bed.gz
62.57 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-9_mapped_to_genome.tar.gz
219.30 kB
iCount summary
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.80 MB
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_type.tsv
441 B
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_summary_subtype.tsv
1023 B
Paraclu
fus-brain-wt-20151220-ju1-1_mapped_to_genome_single_peaks.bed.gz
59.14 kB
iCount RNA-maps
fus-brain-het-20151220-ju1-7_mapped_to_genome_single.tar.gz
563.59 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-5_mapped_to_genome.tar.gz
365.12 kB
iCount summary
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_subtype.tsv
1003 B
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_type.tsv
432 B
fus-brain-het-20151220-ju1-7_mapped_to_genome_single_summary_gene.tsv
1.11 MB
iCount summary
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_gene.tsv
380.51 kB
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_type.tsv
417 B
fus-brain-wt-20151220-ju1-6_mapped_to_genome_single_summary_subtype.tsv
908 B
PEKA
4mer analysis of fus-brain-wt-20160528-ju1-2_mapped_to_genome.tar.gz
410.02 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-3_mapped_to_genome.tar.gz
260.97 kB
PEKA
4mer analysis of fus-brain-het-20160528-ju1_mapped_to_genome.tar.gz
386.43 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-7_mapped_to_genome.tar.gz
306.17 kB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-6_mapped_to_genome.tar.gz
122.91 kB
PEKA
4mer analysis of fus-brain-het-20160528-ju1-1_mapped_to_genome.tar.gz
339.56 kB
iCount summary
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_type.tsv
443 B
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single_summary_gene.tsv
1.79 MB
Paraclu
fus-brain-het-20151220-ju1-3_mapped_to_genome_single_peaks.bed.gz
4.89 kB
STAR
fus-brain-wt-20151220-ju1-2_trimmed.bam.bai
3.23 MB
fus-brain-wt-20151220-ju1-2_trimmed_stats.txt
1.81 kB
fus-brain-wt-20151220-ju1-2_trimmed.bam
352.01 MB
fus-brain-wt-20151220-ju1-2_trimmed_SJ.out.tab
604.91 kB
fus-brain-wt-20151220-ju1-2_trimmed_unmapped.out.mate1.fastq.gz
47.93 MB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-2_mapped_to_genome.tar.gz
420.21 kB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1-1_mapped_to_genome.tar.gz
413.66 kB
PEKA
4mer analysis of fus-brain-wt-20151220-ju1_mapped_to_genome.tar.gz
372.22 kB
iCount xlsites
fus-brain-wt-20151220-ju1-2_mapped_to_genome_skipped.bam
4.01 kB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.bedgraph
73.67 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_reads_single.bed.gz
16.58 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_single.bed.gz
15.81 MB
fus-brain-wt-20151220-ju1-2_mapped_to_genome_singleAndMulti.bed.gz
29.32 MB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20151220-ju1-4.fastq.gz
104.09 MB
fus-brain-het-20151220-ju1-4_fastqc.zip
470.32 kB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-5.fastq.gz
103.63 MB
fus-brain-het-20151220-ju1-5_fastqc.zip
477.03 kB
fastqc
Directory
STAR
fus-brain-wt-20160528-ju1_trimmed_unmapped.out.mate1.fastq.gz
1.89 MB
fus-brain-wt-20160528-ju1_trimmed.bam.bai
1.78 MB
fus-brain-wt-20160528-ju1_trimmed_stats.txt
1.79 kB
fus-brain-wt-20160528-ju1_trimmed.bam
6.91 MB
fus-brain-wt-20160528-ju1_trimmed.bw
5.08 kB
fus-brain-wt-20160528-ju1_trimmed_SJ.out.tab
18.42 kB
Cutadapt (single-end)
fastqc
Directory
fus-brain-wt-20151220-ju1_trimmed.fastq.gz
113.08 MB
report.txt
661 B
Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
fus-brain-het-20151220-ju1-7_trimmed.fastq.gz
46.42 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
665 B
fus-brain-het-20151220-ju1-10_trimmed.fastq.gz
11.30 MB
Cutadapt (single-end)
fastqc
Directory
fus-brain-het-20160528-ju1-1_trimmed.fastq.gz
146.23 MB
report.txt
664 B
Cutadapt (single-end)
report.txt
662 B
fastqc
Directory
fus-brain-wt-20160528-ju1-1_trimmed.fastq.gz
90.86 MB
Cutadapt (single-end)
report.txt
663 B
fastqc
Directory
fus-brain-wt-20160528-ju1-2_trimmed.fastq.gz
389.16 MB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-9.fastq.gz
23.03 MB
fastqc
Directory
fus-brain-het-20151220-ju1-9_fastqc.zip
505.98 kB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-het-20160528-ju1-1.fastq.gz
144.39 MB
fus-brain-het-20160528-ju1-1_fastqc.zip
453.94 kB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20160528-ju1-2_fastqc.zip
433.32 kB
fus-brain-wt-20160528-ju1-2.fastq.gz
385.41 MB

FUS_brain_Het_20151220_JU1_5

iCount RNA-maps
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.tar.gz
931.52 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
664 B
fus-brain-het-20151220-ju1-5_trimmed.fastq.gz
103.80 MB
STAR
fus-brain-het-20151220-ju1-5_trimmed_SJ.out.tab
371.75 kB
fus-brain-het-20151220-ju1-5_trimmed_stats.txt
1.81 kB
fus-brain-het-20151220-ju1-5_trimmed.bam.bai
3.72 MB
fus-brain-het-20151220-ju1-5_trimmed_unmapped.out.mate1.fastq.gz
29.67 MB
fus-brain-het-20151220-ju1-5_trimmed.bam
197.97 MB
iCount xlsites
fus-brain-het-20151220-ju1-5_mapped_to_genome_reads_single.bed.gz
8.08 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_singleAndMulti.bed.gz
16.59 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.bedgraph
35.09 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_skipped.bam
2.48 kB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single.bed.gz
7.69 MB
iCount summary
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_gene.tsv
1.57 MB
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_subtype.tsv
1016 B
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_summary_type.tsv
436 B
Paraclu
fus-brain-het-20151220-ju1-5_mapped_to_genome_single_peaks.bed.gz
17.14 kB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-5_mapped_to_genome.tar.gz
365.12 kB
FASTQ file (CLIP)
fus-brain-het-20151220-ju1-5.fastq.gz
103.63 MB
fus-brain-het-20151220-ju1-5_fastqc.zip
477.03 kB
fastqc
Directory

FUS_brain_Wt_20160528_JU1_2

STAR
fus-brain-wt-20160528-ju1-2_trimmed_SJ.out.tab
616.43 kB
fus-brain-wt-20160528-ju1-2_trimmed.bam.bai
3.57 MB
fus-brain-wt-20160528-ju1-2_trimmed.bam
481.09 MB
fus-brain-wt-20160528-ju1-2_trimmed_stats.txt
1.81 kB
fus-brain-wt-20160528-ju1-2_trimmed_unmapped.out.mate1.fastq.gz
57.44 MB
iCount xlsites
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.bed.gz
9.93 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.bedgraph
45.74 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_singleAndMulti.bed.gz
12.63 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_reads_single.bed.gz
11.29 MB
fus-brain-wt-20160528-ju1-2_mapped_to_genome_skipped.bam
2.38 kB
iCount RNA-maps
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single.tar.gz
1.37 MB
iCount summary
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_type.tsv
437 B
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_subtype.tsv
1020 B
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_summary_gene.tsv
1.57 MB
Paraclu
fus-brain-wt-20160528-ju1-2_mapped_to_genome_single_peaks.bed.gz
15.92 kB
PEKA
4mer analysis of fus-brain-wt-20160528-ju1-2_mapped_to_genome.tar.gz
410.02 kB
Cutadapt (single-end)
report.txt
663 B
fastqc
Directory
fus-brain-wt-20160528-ju1-2_trimmed.fastq.gz
389.16 MB
FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20160528-ju1-2_fastqc.zip
433.32 kB
fus-brain-wt-20160528-ju1-2.fastq.gz
385.41 MB

FUS_brain_Het_20151220_JU1_8

FASTQ file (CLIP)
fus-brain-het-20151220-ju1-8_fastqc.zip
533.44 kB
fastqc
Directory
fus-brain-het-20151220-ju1-8.fastq.gz
39.61 MB
PEKA
4mer analysis of fus-brain-het-20151220-ju1-8_mapped_to_genome.tar.gz
290.57 kB
Cutadapt (single-end)
report.txt
664 B
fastqc
Directory
fus-brain-het-20151220-ju1-8_trimmed.fastq.gz
36.48 MB
STAR
fus-brain-het-20151220-ju1-8_trimmed.bam
70.23 MB
fus-brain-het-20151220-ju1-8_trimmed.bw
11.78 kB
fus-brain-het-20151220-ju1-8_trimmed.bam.bai
4.08 MB
fus-brain-het-20151220-ju1-8_trimmed_stats.txt
1.80 kB
fus-brain-het-20151220-ju1-8_trimmed_SJ.out.tab
101.88 kB
fus-brain-het-20151220-ju1-8_trimmed_unmapped.out.mate1.fastq.gz
15.11 MB
iCount xlsites
fus-brain-het-20151220-ju1-8_mapped_to_genome_singleAndMulti.bed.gz
3.38 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_skipped.bam
1.67 kB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.bedgraph
4.59 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_reads_single.bed.gz
1.21 MB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.bed.gz
1.09 MB
iCount RNA-maps
fus-brain-het-20151220-ju1-8_mapped_to_genome_single.tar.gz
528.91 kB
Paraclu
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_peaks.bed.gz
2.36 kB
iCount summary
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_gene.tsv
1006.30 kB
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_subtype.tsv
995 B
fus-brain-het-20151220-ju1-8_mapped_to_genome_single_summary_type.tsv
427 B

FUS_brain_Wt_20160528_JU1

FASTQ file (CLIP)
fastqc
Directory
fus-brain-wt-20160528-ju1.fastq.gz
6.70 MB
fus-brain-wt-20160528-ju1_fastqc.zip
473.69 kB
Cutadapt (single-end)
report.txt
661 B
fastqc
Directory
fus-brain-wt-20160528-ju1_trimmed.fastq.gz
5.07 MB
iCount xlsites
fus-brain-wt-20160528-ju1_mapped_to_genome_singleAndMulti.bed.gz
251.99 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single.bedgraph
491.88 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_skipped.bam
1.76 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_reads_single.bed.gz
144.64 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single.bed.gz
129.86 kB
iCount RNA-maps
fus-brain-wt-20160528-ju1_mapped_to_genome_single.tar.gz
417.93 kB
iCount summary
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_type.tsv
418 B
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_gene.tsv
407.30 kB
fus-brain-wt-20160528-ju1_mapped_to_genome_single_summary_subtype.tsv
905 B
Paraclu
fus-brain-wt-20160528-ju1_mapped_to_genome_single_peaks.bed.gz
457 B
PEKA
4mer analysis of fus-brain-wt-20160528-ju1_mapped_to_genome.tar.gz
118.70 kB
STAR
fus-brain-wt-20160528-ju1_trimmed_unmapped.out.mate1.fastq.gz
1.89 MB
fus-brain-wt-20160528-ju1_trimmed.bam.bai
1.78 MB
fus-brain-wt-20160528-ju1_trimmed_stats.txt
1.79 kB
fus-brain-wt-20160528-ju1_trimmed.bam
6.91 MB
fus-brain-wt-20160528-ju1_trimmed.bw
5.08 kB
fus-brain-wt-20160528-ju1_trimmed_SJ.out.tab
18.42 kB