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Rahul Arora
June 22, 2020

snRNPA_Lorea_Blaz_20151023_JU1.fastq.gz

FASTQ file (single-end)
snRNPA_Lorea_Blaz_20151023_JU1_fastqc.zip
514.75 kB
fastqc
Directory
snRNPA_Lorea_Blaz_20151023_JU1.fastq.gz
6.74 GB
stderr.txt
1.25 kB

snRNPA_Lorea_Blaz_20150916_Ju2.fastq.gz

FASTQ file (single-end)
fastqc
Directory
snRNPA_Lorea_Blaz_20150916_Ju2.fastq.gz
2.54 GB
snRNPA_Lorea_Blaz_20150916_Ju2_fastqc.zip
490.57 kB
stderr.txt
1.25 kB

snRNPA_Lorea_Blaz_20151023_JU2.fastq.gz

FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.25 kB
snRNPA_Lorea_Blaz_20151023_JU2_fastqc.zip
530.89 kB
snRNPA_Lorea_Blaz_20151023_JU2.fastq.gz
4.63 GB

SNRPA-n3xFLAG_HelaFlp_SingleIP_Flag_L3RNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2.fastq.gz
94.43 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_fastqc.zip
518.58 kB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.bam
393.19 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.bam.bai
2.98 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_SJ.out.tab
1016.41 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
12.18 MB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
23.94 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
6.98 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
5.17 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
3.29 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
5.21 MB
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
1.40 MB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
25.64 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome.tar.gz
382.67 kB
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
1.41 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
433 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
1011 B
Cutadapt (single-end)
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.fastq.gz
96.70 MB
fastqc
Directory
report.txt
689 B

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2.fastq.gz
19.21 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_fastqc.zip
547.45 kB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_SJ.out.tab
103.16 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bam.bai
2.35 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bam
71.04 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
7.88 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bw
25.70 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
561.97 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
1.02 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome.tar.gz
131.41 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
426 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
895.77 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
992 B
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
580.11 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
2.32 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
847.76 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
566.69 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
3.17 kB
Cutadapt (single-end)
report.txt
692 B
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.fastq.gz
19.46 MB

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_IgG_L3RNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2.fastq.gz
700.53 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_fastqc.zip
536.09 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome.tar.gz
177 B
Cutadapt (single-end)
fastqc
Directory
report.txt
691 B
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.fastq.gz
712.57 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
18.08 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
8.81 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
25.36 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
7.91 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
144 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
250.46 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
47.59 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
696 B
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
404 B
STAR
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bam
919.38 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
55.29 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bam.bai
1.44 MB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bw
16.52 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_SJ.out.tab
2.05 kB

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3RNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_fastqc.zip
572.54 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2.fastq.gz
38.73 MB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.fastq.gz
39.83 MB
report.txt
692 B
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_SJ.out.tab
206.38 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bam
106.74 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
19.38 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bam.bai
2.63 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bw
29.76 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
1.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
999.34 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
4.21 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
1.03 MB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
663.81 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
4.34 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
425 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
998 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
1.04 MB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome.tar.gz
302.42 kB

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3DNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2.fastq.gz
29.11 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_fastqc.zip
573.98 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
15.37 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bam
83.14 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bam.bai
2.40 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bw
26.89 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_SJ.out.tab
125.53 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
577.35 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
984.66 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
605.43 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
2.36 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
563.87 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
2.78 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome.tar.gz
279.71 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
928.83 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
992 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
429 B
Cutadapt (single-end)
fastqc
Directory
report.txt
692 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.fastq.gz
29.88 MB

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20150916_Ju2_1

Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.fastq.gz
31.73 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bw
25.99 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_SJ.out.tab
131.76 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bam
118.60 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bam.bai
2.44 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
14.02 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_stats.txt
1.80 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
1021.90 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.bed.gz
690.64 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_reads_single.bed.gz
707.95 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.bedgraph
2.86 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_skipped.bam
2.98 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_type.tsv
424 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_subtype.tsv
988 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_gene.tsv
955.52 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome.tar.gz
202.15 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.tar.gz
593.78 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_peaks.bed.gz
1.60 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_fastqc.zip
562.03 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1.fastq.gz
31.09 MB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
1.55 GB
demux_nomatch_fastqc.zip
487.69 kB
fastqc
Directory

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3DNA_20151023_JU2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_fastqc.zip
605.18 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2.fastq.gz
252.51 MB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome.tar.gz
355.94 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.bam.bai
3.23 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
135.33 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_SJ.out.tab
431.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.bam
692.61 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.45 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bedgraph
9.27 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_skipped.bam
3.67 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.37 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bed.gz
2.09 MB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
13.08 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.tar.gz
897.82 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
435 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.26 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1009 B
Cutadapt (single-end)
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.fastq.gz
259.81 MB
fastqc
Directory
report.txt
693 B

demux_nomatch.fastq.gz

FASTQ file (CLIP)
demux_nomatch.fastq.gz
2.94 GB
demux_nomatch_fastqc.zip
526.49 kB
fastqc
Directory

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3RNA_20151023_JU2_1

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_fastqc.zip
630.41 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1.fastq.gz
267.13 MB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.tar.gz
1.19 MB
Cutadapt (single-end)
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.fastq.gz
275.02 MB
fastqc
Directory
report.txt
695 B
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.bam.bai
3.44 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.bam
730.16 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
141.72 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_SJ.out.tab
768.24 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
6.16 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_reads_single.bed.gz
4.32 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_skipped.bam
3.50 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.bedgraph
18.11 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.bed.gz
3.96 MB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_gene.tsv
1.46 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_subtype.tsv
1019 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_type.tsv
441 B
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_peaks.bed.gz
32.54 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome.tar.gz
387.65 kB

No Sample

Cutadapt (single-end)
fastqc
Directory
report.txt
692 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.fastq.gz
29.88 MB
FASTQ file (single-end)
fastqc
Directory
snRNPA_Lorea_Blaz_20150916_Ju2.fastq.gz
2.54 GB
snRNPA_Lorea_Blaz_20150916_Ju2_fastqc.zip
490.57 kB
stderr.txt
1.25 kB
FASTQ file (single-end)
snRNPA_Lorea_Blaz_20151023_JU1_fastqc.zip
514.75 kB
fastqc
Directory
snRNPA_Lorea_Blaz_20151023_JU1.fastq.gz
6.74 GB
stderr.txt
1.25 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
1.02 kB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
566 B
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2.fastq.gz
19.21 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_fastqc.zip
547.45 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1.fastq.gz
86.18 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_fastqc.zip
582.48 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2.fastq.gz
29.11 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_fastqc.zip
573.98 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2.fastq.gz
700.53 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_fastqc.zip
536.09 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome.tar.gz
177 B
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_fastqc.zip
526.73 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2.fastq.gz
17.55 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_fastqc.zip
491.38 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2.fastq.gz
2.02 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2.fastq.gz
5.77 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_fastqc.zip
471.30 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2.fastq.gz
94.43 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_fastqc.zip
518.58 kB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
1.55 GB
demux_nomatch_fastqc.zip
487.69 kB
fastqc
Directory
FASTQ file (CLIP)
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_fastqc.zip
523.56 kB
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2.fastq.gz
307.06 MB
iCount demultiplex (from annotation file)
demultiplexing_stats.txt
324 B
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2.fastq.gz
231.14 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_fastqc.zip
597.66 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_fastqc.zip
630.41 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1.fastq.gz
267.13 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_fastqc.zip
605.18 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2.fastq.gz
252.51 MB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome.tar.gz
355.94 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.tar.gz
1.19 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2.fastq.gz
129.84 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_fastqc.zip
586.08 kB
FASTQ file (CLIP)
demux_nomatch.fastq.gz
2.94 GB
demux_nomatch_fastqc.zip
526.49 kB
fastqc
Directory
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.fastq.gz
88.68 MB
report.txt
694 B
Cutadapt (single-end)
fastqc
Directory
report.txt
691 B
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.fastq.gz
712.57 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.fastq.gz
17.84 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_fastqc.zip
615.89 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1.fastq.gz
53.37 MB
FASTQ file (CLIP)
fastqc
Directory
demux_nomatch.fastq.gz
6.39 GB
demux_nomatch_fastqc.zip
517.31 kB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1.fastq.gz
48.35 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_fastqc.zip
555.73 kB
Cutadapt (single-end)
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.fastq.gz
275.02 MB
fastqc
Directory
report.txt
695 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.fastq.gz
132.47 MB
report.txt
693 B
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
15.37 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bam
83.14 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bam.bai
2.40 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed.bw
26.89 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_trimmed_SJ.out.tab
125.53 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.bam
250.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_SJ.out.tab
378.36 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
45.76 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.bam.bai
2.91 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_SJ.out.tab
83.79 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bw
24.55 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bam.bai
2.31 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_unmapped.out.mate1.fastq.gz
8.11 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bam
60.28 MB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.bam
393.19 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.bam.bai
2.98 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_SJ.out.tab
1016.41 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
12.18 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bw
25.99 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_SJ.out.tab
131.76 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bam
118.60 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.bam.bai
2.44 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
14.02 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed_stats.txt
1.80 kB
STAR
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bam.bai
1.55 MB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bw
18.96 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
95.53 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_SJ.out.tab
9.19 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bam
2.34 MB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_stats.txt
1.79 kB
Cutadapt (single-end)
report.txt
694 B
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.fastq.gz
54.51 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_SJ.out.tab
103.16 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bam.bai
2.35 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bam
71.04 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
7.88 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.bw
25.70 kB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
701.82 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bam
14.48 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bam.bai
2.20 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_SJ.out.tab
101.79 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bw
22.81 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
692 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.fastq.gz
49.07 MB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.bam.bai
3.23 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
135.33 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_SJ.out.tab
431.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.bam
692.61 MB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.bam.bai
3.44 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed.bam
730.16 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
141.72 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_trimmed_SJ.out.tab
768.24 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.bam
595.79 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
451.49 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
114.26 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.14 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_SJ.out.tab
446.62 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
56.51 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.bam
453.47 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.bam.bai
3.12 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_stats.txt
1.81 kB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
2.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.27 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam
1.17 GB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
37.99 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
577.35 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
984.66 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
605.43 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
2.36 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.bedgraph
7.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.bed.gz
1.70 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_skipped.bam
3.18 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_reads_single.bed.gz
1.79 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
2.67 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
18.08 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
8.81 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
25.36 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
7.91 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
1021.90 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.bed.gz
690.64 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_reads_single.bed.gz
707.95 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.bedgraph
2.86 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_skipped.bam
2.98 kB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.bedgraph
1.81 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_reads_single.bed.gz
451.20 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.bed.gz
446.84 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
670.11 kB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
23.94 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
6.98 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
5.17 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
3.29 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
5.21 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_SJ.out.tab
242.28 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
24.37 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.bam.bai
2.70 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.bam
205.33 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_SJ.out.tab
211.68 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.bam.bai
2.83 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_unmapped.out.mate1.fastq.gz
22.82 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.bam
168.47 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_stats.txt
1.80 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.45 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bedgraph
9.27 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_skipped.bam
3.67 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.37 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bed.gz
2.09 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
6.16 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_reads_single.bed.gz
4.32 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_skipped.bam
3.50 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.bedgraph
18.11 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single.bed.gz
3.96 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.45 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bed.gz
2.20 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.51 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bedgraph
9.77 MB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bedgraph
11.02 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bed.gz
2.46 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.63 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.67 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_skipped.bam
3.32 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
563.87 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
2.78 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_subtype.tsv
1002 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_gene.tsv
1.20 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_type.tsv
434 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.tar.gz
831.03 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_peaks.bed.gz
10.54 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
144 B
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_gene.tsv
846.33 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_subtype.tsv
988 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_type.tsv
426 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_peaks.bed.gz
926 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
250.46 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
561.97 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_type.tsv
424 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_subtype.tsv
988 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_summary_gene.tsv
955.52 kB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
777 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.tar.gz
529.33 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
1.02 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
403 B
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
692 B
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
69.43 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
284.08 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
1.40 MB
Paraclu
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
218 B
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.tar.gz
523.77 kB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
25.64 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.bedgraph
5.14 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_reads_single.bed.gz
1.23 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.bed.gz
1.18 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
1.74 MB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
13.08 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_gene.tsv
1.46 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_subtype.tsv
1019 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_summary_type.tsv
441 B
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_singleAndMulti.bed.gz
1.78 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_reads_single.bed.gz
1.19 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.bed.gz
1.13 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.bedgraph
4.87 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_skipped.bam
2.98 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome_single_peaks.bed.gz
32.54 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
6.53 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
437 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1012 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.27 MB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single.tar.gz
897.82 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
12.35 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.tar.gz
909.01 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
432 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.28 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1005 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.tar.gz
964.20 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome.tar.gz
279.71 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome.tar.gz
335.10 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome.tar.gz
131.05 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome.tar.gz
131.41 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome.tar.gz
176 B
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome.tar.gz
177 B
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome.tar.gz
128.87 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.08 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_subtype.tsv
997 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_type.tsv
430 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_subtype.tsv
1001 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_gene.tsv
1.10 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_type.tsv
432 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.tar.gz
713.82 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome.tar.gz
382.67 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_peaks.bed.gz
2.45 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.tar.gz
701.96 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome.tar.gz
353.04 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome.tar.gz
327.46 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2-1_mapped_to_genome.tar.gz
387.65 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome.tar.gz
285.54 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome.tar.gz
283.94 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome.tar.gz
202.15 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
435 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.26 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1009 B
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
363.04 kB
Paraclu
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
180 B
iCount summary
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
825 B
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
214.92 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
406 B
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
1.41 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
433 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
1011 B
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
911 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
828.58 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_type.tsv
419 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single.tar.gz
593.78 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
426 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
895.77 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
992 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_mapped_to_genome_single_peaks.bed.gz
1.60 kB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
35.31 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
96.53 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
36.76 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
123.38 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
55.88 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
16.56 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
15.88 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
51.83 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
580.11 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
2.32 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
847.76 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
566.69 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
3.17 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
47.59 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
696 B
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
404 B
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
928.83 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
992 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
429 B
STAR
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
1.32 MB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_SJ.out.tab
3.11 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bw
18.31 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bam.bai
1.52 MB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bam
2.65 MB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.bed.gz
458.97 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_singleAndMulti.bed.gz
730.08 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.bedgraph
1.85 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_reads_single.bed.gz
470.54 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bam
919.38 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
55.29 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bam.bai
1.44 MB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed.bw
16.52 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-double2ndip-igg-l3rna-20150916-ju2_trimmed_SJ.out.tab
2.05 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
690 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
313.81 MB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
237.74 MB
report.txt
693 B
Cutadapt (single-end)
snrpa-n3xflag-helaflp-double2ndip-flag-l3dna-20151023-ju2_trimmed.fastq.gz
259.81 MB
fastqc
Directory
report.txt
693 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.fastq.gz
927.74 kB
report.txt
688 B
Cutadapt (single-end)
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20150916-ju2_trimmed.fastq.gz
96.70 MB
fastqc
Directory
report.txt
689 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.fastq.gz
5.89 MB
report.txt
695 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.fastq.gz
1.87 MB
report.txt
691 B
Cutadapt (single-end)
report.txt
692 B
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2_trimmed.fastq.gz
19.46 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_trimmed.fastq.gz
31.73 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1_fastqc.zip
562.03 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-1.fastq.gz
31.09 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_fastqc.zip
572.54 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2.fastq.gz
38.73 MB
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_fastqc.zip
516.18 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2.fastq.gz
933.74 kB
FASTQ file (single-end)
fastqc
Directory
stderr.txt
1.25 kB
snRNPA_Lorea_Blaz_20151023_JU2_fastqc.zip
530.89 kB
snRNPA_Lorea_Blaz_20151023_JU2.fastq.gz
4.63 GB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
313.81 MB
report.txt
690 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.fastq.gz
39.83 MB
report.txt
692 B
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
2.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam
1.17 GB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
37.99 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.27 MB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bed.gz
16.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bedgraph
77.49 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
16.61 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_skipped.bam
4.04 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
21.09 MB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_SJ.out.tab
206.38 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bam
106.74 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
19.38 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bam.bai
2.63 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_trimmed.bw
29.76 kB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
1.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
999.34 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
4.21 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
1.03 MB
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.74 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
440 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
663.81 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.tar.gz
2.46 MB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
148.73 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
4.34 kB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
425 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
998 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
1.04 MB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome.tar.gz
471.17 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2_mapped_to_genome.tar.gz
302.42 kB
Upload iCount sample annotation
snRNPA_Lorea_Blaz_20150916_Ju2.xlsx
15.96 kB
snRNPA_Lorea_Blaz_20150916_Ju2.tab.gz
1.05 kB
Upload iCount sample annotation
snRNPA_Lorea_Blaz_20151023_JU1.xlsx
15.89 kB
snRNPA_Lorea_Blaz_20151023_JU1.tab.gz
859 B
Upload iCount sample annotation
snRNPA_Lorea_Blaz_20151023_JU2.tab.gz
939 B
snRNPA_Lorea_Blaz_20151023_JU2.xlsx
14.57 kB

demux_nomatch.fastq.gz

FASTQ file (CLIP)
fastqc
Directory
demux_nomatch.fastq.gz
6.39 GB
demux_nomatch_fastqc.zip
517.31 kB

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3RNA_20151023_JU2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2.fastq.gz
231.14 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_fastqc.zip
597.66 kB
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.bam
595.79 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
451.49 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
114.26 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.14 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.45 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bed.gz
2.20 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.51 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bedgraph
9.77 MB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
437 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1012 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.27 MB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
12.35 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome_single.tar.gz
909.01 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_mapped_to_genome.tar.gz
353.04 kB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
237.74 MB
report.txt
693 B

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20151023_JU2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2.fastq.gz
129.84 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_fastqc.zip
586.08 kB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.fastq.gz
132.47 MB
report.txt
693 B
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_SJ.out.tab
446.62 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
56.51 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.bam
453.47 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed.bam.bai
3.12 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_trimmed_stats.txt
1.81 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bedgraph
11.02 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.bed.gz
2.46 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
3.63 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
2.67 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_skipped.bam
3.32 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
6.53 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
432 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.28 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1005 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome_single.tar.gz
964.20 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju2_mapped_to_genome.tar.gz
327.46 kB

SNRPA-n3xFLAG_HelaFlp_SingleIP_Flag_L3RNA_20151023_JU2

FASTQ file (CLIP)
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_fastqc.zip
523.56 kB
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2.fastq.gz
307.06 MB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
2.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.27 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam
1.17 GB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
37.99 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
690 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
313.81 MB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.fastq.gz
313.81 MB
report.txt
690 B
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_SJ.out.tab
2.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam
1.17 GB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed_unmapped.out.mate1.fastq.gz
37.99 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_trimmed.bam.bai
3.27 MB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bed.gz
16.31 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.bedgraph
77.49 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_reads_single.bed.gz
16.61 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_skipped.bam
4.04 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_singleAndMulti.bed.gz
21.09 MB
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_gene.tsv
1.74 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_type.tsv
440 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_summary_subtype.tsv
1.01 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single.tar.gz
2.46 MB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome_single_peaks.bed.gz
148.73 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-20151023-ju2_mapped_to_genome.tar.gz
471.17 kB

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20151023_JU1

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1.fastq.gz
48.35 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_fastqc.zip
555.73 kB
Cutadapt (single-end)
fastqc
Directory
report.txt
692 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.fastq.gz
49.07 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_SJ.out.tab
211.68 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.bam.bai
2.83 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_unmapped.out.mate1.fastq.gz
22.82 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed.bam
168.47 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_trimmed_stats.txt
1.80 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_singleAndMulti.bed.gz
1.78 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_reads_single.bed.gz
1.19 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.bed.gz
1.13 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.bedgraph
4.87 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_skipped.bam
2.98 kB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_subtype.tsv
1001 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_gene.tsv
1.10 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_summary_type.tsv
432 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single_peaks.bed.gz
2.45 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome_single.tar.gz
701.96 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1_mapped_to_genome.tar.gz
283.94 kB

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20151023_JU1_1

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_fastqc.zip
615.89 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1.fastq.gz
53.37 MB
Cutadapt (single-end)
report.txt
694 B
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.fastq.gz
54.51 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_SJ.out.tab
242.28 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed_unmapped.out.mate1.fastq.gz
24.37 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.bam.bai
2.70 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_trimmed.bam
205.33 MB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.bedgraph
5.14 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_reads_single.bed.gz
1.23 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.bed.gz
1.18 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_singleAndMulti.bed.gz
1.74 MB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_gene.tsv
1.08 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_subtype.tsv
997 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_summary_type.tsv
430 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single_peaks.bed.gz
2.72 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome_single.tar.gz
713.82 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20151023-ju1-1_mapped_to_genome.tar.gz
285.54 kB

SNRPA-n3xFLAG_HelaFlp_SingleIP_IgG_L3RNA_20150916_Ju2

STAR
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bam.bai
1.55 MB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bw
18.96 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
95.53 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_SJ.out.tab
9.19 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.bam
2.34 MB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed_stats.txt
1.79 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome.tar.gz
177 B
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.tar.gz
363.04 kB
Paraclu
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
180 B
iCount summary
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
825 B
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
214.92 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
406 B
iCount xlsites
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bed.gz
35.31 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
96.53 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
36.76 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_mapped_to_genome_single.bedgraph
123.38 kB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_trimmed.fastq.gz
927.74 kB
report.txt
688 B
FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2_fastqc.zip
516.18 kB
snrpa-n3xflag-helaflp-singleip-igg-l3rna-20150916-ju2.fastq.gz
933.74 kB

SNRPA-n3xFLAG_HelaFlp_SingleIP_Flag_L3RNA_TGIRT_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2.fastq.gz
5.77 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_fastqc.zip
471.30 kB
STAR
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
701.82 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bam
14.48 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bam.bai
2.20 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed_SJ.out.tab
101.79 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.bw
22.81 kB
iCount xlsites
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.bedgraph
1.81 MB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_reads_single.bed.gz
451.20 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.bed.gz
446.84 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
670.11 kB
Paraclu
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
777 B
iCount RNA-maps
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single.tar.gz
523.77 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome.tar.gz
128.87 kB
iCount summary
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
911 B
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
828.58 kB
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_mapped_to_genome_single_summary_type.tsv
419 B
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-singleip-flag-l3rna-tgirt-20150916-ju2_trimmed.fastq.gz
5.89 MB
report.txt
695 B

SNRPA-n3xFLAG_HelaFlp_Double1stIP_IgG_L3DNA_20150916_Ju2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_fastqc.zip
491.38 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2.fastq.gz
2.02 MB
iCount summary
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_type.tsv
403 B
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_subtype.tsv
692 B
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_summary_gene.tsv
69.43 kB
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.tar.gz
284.08 kB
Paraclu
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single_peaks.bed.gz
218 B
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome.tar.gz
176 B
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_singleAndMulti.bed.gz
55.88 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_reads_single.bed.gz
16.56 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.bed.gz
15.88 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_single.bedgraph
51.83 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_mapped_to_genome_skipped.bam
2.98 kB
STAR
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_unmapped.out.mate1.fastq.gz
1.32 MB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_stats.txt
1.79 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed_SJ.out.tab
3.11 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bw
18.31 kB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bam.bai
1.52 MB
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.bam
2.65 MB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-igg-l3dna-20150916-ju2_trimmed.fastq.gz
1.87 MB
report.txt
691 B

SNRPA-n3xFLAG_HelaFlp_Double1stIP_Flag_L3DNA_20150916_Ju2_2

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_fastqc.zip
526.73 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2.fastq.gz
17.55 MB
Cutadapt (single-end)
fastqc
Directory
report.txt
694 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.fastq.gz
17.84 MB
STAR
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_SJ.out.tab
83.79 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bw
24.55 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bam.bai
2.31 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_stats.txt
1.80 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed_unmapped.out.mate1.fastq.gz
8.11 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_trimmed.bam
60.28 MB
iCount summary
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_gene.tsv
846.33 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_subtype.tsv
988 B
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_summary_type.tsv
426 B
Paraclu
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single_peaks.bed.gz
926 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.tar.gz
529.33 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome.tar.gz
131.05 kB
iCount xlsites
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.bed.gz
458.97 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_skipped.bam
2.98 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_singleAndMulti.bed.gz
730.08 kB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_single.bedgraph
1.85 MB
snrpa-n3xflag-helaflp-double1stip-flag-l3dna-20150916-ju2-2_mapped_to_genome_reads_single.bed.gz
470.54 kB

SNRPA-n3xFLAG_HelaFlp_Double2ndIP_Flag_L3RNA_20150916_Ju2_1

FASTQ file (CLIP)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1.fastq.gz
86.18 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_fastqc.zip
582.48 kB
Cutadapt (single-end)
fastqc
Directory
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.fastq.gz
88.68 MB
report.txt
694 B
STAR
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_stats.txt
1.81 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.bam
250.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_SJ.out.tab
378.36 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed_unmapped.out.mate1.fastq.gz
45.76 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_trimmed.bam.bai
2.91 MB
iCount xlsites
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.bedgraph
7.53 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.bed.gz
1.70 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_skipped.bam
3.18 kB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_reads_single.bed.gz
1.79 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_singleAndMulti.bed.gz
2.67 MB
iCount summary
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_subtype.tsv
1002 B
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_gene.tsv
1.20 MB
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_summary_type.tsv
434 B
iCount RNA-maps
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single.tar.gz
831.03 kB
Paraclu
snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome_single_peaks.bed.gz
10.54 kB
PEKA
4mer analysis of snrpa-n3xflag-helaflp-double2ndip-flag-l3rna-20150916-ju2-1_mapped_to_genome.tar.gz
335.10 kB